View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21323_low_4 (Length: 643)
Name: NF21323_low_4
Description: NF21323
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21323_low_4 |
 |  |
|
Alignment Details
Target: chr2 (Bit Score: 423; Significance: 0; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 423; E-Value: 0
Query Start/End: Original strand, 15 - 629
Target Start/End: Complemental strand, 13441600 - 13440986
Alignment:
| Q |
15 |
tgtgttattacaagaggttcataatattcatatggatgataacttgtattctcttactctcctcgtggctctcgtgcagatggaataaaataatatgaat |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13441600 |
tgtgttattacaagaggttcataatattcatatggatgataacttgtgttctcttactctcctcgtggctctcgtgcagatggaataaaataatatgaat |
13441501 |
T |
 |
| Q |
115 |
aataagtatattatttacgtataaaaacgaaagtatggtcgaacttgaactcatgcactcacacacggggagatatagaaacgtgaatagtgagtagaat |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
13441500 |
aataagtatattatttacgtataaaaacgaaagtatggtcgaacttgaactcatgcactcacacacggggagatatagaaacgtgaatagtgaatagaat |
13441401 |
T |
 |
| Q |
215 |
ataatagaataaatttatcaacaatggaaggtgttgaagtggaacgaccactgaaaattcacttcattccttatctagcatctagccatatgatccctct |
314 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||| |
|
|
| T |
13441400 |
ataatagaataaatttatcaacaatggaaggtgttgaagtggaacgaccactgaaaattcacttcattccatatctagcatctggacatatgatccctct |
13441301 |
T |
 |
| Q |
315 |
ttgtgatatagcagctatgtttgcatcccgtggccaacatgtcgcaatcatcaccactccctccaattccaaattccttacaaaatctctatcttatgcc |
414 |
Q |
| |
|
|||||| |||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||| | ||| ||| || |||||||| || | || |
|
|
| T |
13441300 |
ttgtgacatagcaactatgtttgcatcccgtggccaacaagtcacaatcatcaccactccctccaacgctcaatccctaaccaaatctctctcatccgcg |
13441201 |
T |
 |
| Q |
415 |
gctcccttcttcctcagccttcacaccgtcgacttcccctttcaacaaatggacctccctgaaggcattgaatctatatcctccaccactgaccttgtca |
514 |
Q |
| |
|
||| ||||||||||| || | |||||||||||||| |||| |||||| | |||||||||||||||||||||||||| || |||||||||||| | | | |
|
|
| T |
13441200 |
gcttccttcttcctccgcttccacaccgtcgactttccctcccaacaagtcgacctccctgaaggcattgaatctatgtcttccaccactgactctatga |
13441101 |
T |
 |
| Q |
515 |
ccacttggaagatcaacaatggcgcaatgctcctccatcgacccattgaggatttcattaaaaacgatccaccagattgtatcatctccgactctgcata |
614 |
Q |
| |
|
|| ||||||||||| || ||||||||||||||||||| || |||||||||||||||| | || ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
13441100 |
cctcttggaagatccaccgtggcgcaatgctcctccatggatccattgaggatttcatggagaaagatccaccagattgtatcatctccgactccgcata |
13441001 |
T |
 |
| Q |
615 |
cccatgggttaatga |
629 |
Q |
| |
|
|||||||| |||||| |
|
|
| T |
13441000 |
cccatgggctaatga |
13440986 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 236 - 572
Target Start/End: Complemental strand, 13462563 - 13462227
Alignment:
| Q |
236 |
caatggaaggtgttgaagtggaacgaccactgaaaattcacttcattccttatctagcatctagccatatgatccctctttgtgatatagcagctatgtt |
335 |
Q |
| |
|
||||||||||||| ||||| |||| |||||||||| | ||||||||||| |||||||||||| | |||||||||||||||| ||| |||||| |||||| |
|
|
| T |
13462563 |
caatggaaggtgtagaagttgaacaaccactgaaactgcacttcattccatatctagcatctggacatatgatccctctttttgacatagcaattatgtt |
13462464 |
T |
 |
| Q |
336 |
tgcatcccgtggccaacatgtcgcaatcatcaccactccctccaattccaaattccttacaaaatctctatcttatgccgctcccttcttcctcagcctt |
435 |
Q |
| |
|
|||||||||||||||||| ||| || ||||||||||||||||||| | ||| |||||| |||||||| || | |||||||||| | |||| || || |
|
|
| T |
13462463 |
tgcatcccgtggccaacacgtcacagtcatcaccactccctccaacgtccaatcccttaccaaatctctctcatccgccgctccctccctccttcgcttt |
13462364 |
T |
 |
| Q |
436 |
cacaccgtcgacttcccctttcaacaaatggacctccctgaaggcattgaatctatatcctccaccactgaccttgtcaccacttggaagatcaacaatg |
535 |
Q |
| |
|
|||||| |||| ||||||| |||||| | | ||| ||||| |||||||||||||| || |||||||| ||| ||| ||||||||||| | ||| |
|
|
| T |
13462363 |
cacaccatcgaattcccctcccaacaagttggccttcctgatggcattgaatctatgtcttccaccaccgactccaccacatcttggaagatccatcatg |
13462264 |
T |
 |
| Q |
536 |
gcgcaatgctcctccatcgacccattgaggatttcat |
572 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
13462263 |
gcgcaatgctcctccatggacccattgaggatttcat |
13462227 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 236 - 629
Target Start/End: Complemental strand, 13449542 - 13449149
Alignment:
| Q |
236 |
caatggaaggtgttgaagtggaacgaccactgaaaattcacttcattccttatctagcatctagccatatgatccctctttgtgatatagcagctatgtt |
335 |
Q |
| |
|
||||||||||||||||||| |||| |||| ||||| || |||||||||| | ||| |||||| | |||||||||||||||| ||| |||||| ||||||| |
|
|
| T |
13449542 |
caatggaaggtgttgaagttgaacaaccattgaaagtttacttcattccatttcttgcatctggacatatgatccctctttttgacatagcaactatgtt |
13449443 |
T |
 |
| Q |
336 |
tgcatcccgtggccaacatgtcgcaatcatcaccactccctccaattccaaattccttacaaaatctctatcttatgccgctcccttcttcctcagcctt |
435 |
Q |
| |
|
||||||||||||||| || || || |||||||||||||| |||| | |||| |||||| |||||||| || | | |||||| | ||||| | ||| |
|
|
| T |
13449442 |
tgcatcccgtggccagcaagtaacagtcatcaccactcccgccaacgcaaaatcccttaccaaatctctctcatccgacgctccttcattccttcgtctt |
13449343 |
T |
 |
| Q |
436 |
cacaccgtcgacttcccctttcaacaaatggacctccctgaaggcattgaatctatatcctccaccactgaccttgtcaccacttggaagatcaacaatg |
535 |
Q |
| |
|
|||||||| |||||||||| |||||| | | |||||||||||| ||||||||||| || || || || |||| |||||||||||||||| | | || |
|
|
| T |
13449342 |
cacaccgttgacttcccctcccaacaagtcggcctccctgaaggtattgaatctatgtcttcaactacggaccccaccaccacttggaagatccatactg |
13449243 |
T |
 |
| Q |
536 |
gcgcaatgctcctccatcgacccattgaggatttcattaaaaacgatccaccagattgtatcatctccgactctgcatacccatgggttaatga |
629 |
Q |
| |
|
|||| |||||||| | ||| |||| |||||||||| | || |||||||| |||||||||||||||||||| | ||||||||||||||||| |
|
|
| T |
13449242 |
gcgcgatgctccttaaagaacctattggggatttcattgagaatgatccaccggattgtatcatctccgactccacgtacccatgggttaatga |
13449149 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 580 - 629
Target Start/End: Complemental strand, 13455669 - 13455620
Alignment:
| Q |
580 |
gatccaccagattgtatcatctccgactctgcatacccatgggttaatga |
629 |
Q |
| |
|
||||| ||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
13455669 |
gatcccccagattgtatcatctccgacgctgcatacccatgggttaatga |
13455620 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 342; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 342; E-Value: 0
Query Start/End: Original strand, 236 - 629
Target Start/End: Original strand, 3416536 - 3416929
Alignment:
| Q |
236 |
caatggaaggtgttgaagtggaacgaccactgaaaattcacttcattccttatctagcatctagccatatgatccctctttgtgatatagcagctatgtt |
335 |
Q |
| |
|
|||||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
3416536 |
caatggtaggtgttgaagtagaacgaccactgaaaattcacttcattccttatcttgcatctagccatatgatccctctttctgatatagcagctatgtt |
3416635 |
T |
 |
| Q |
336 |
tgcatcccgtggccaacatgtcgcaatcatcaccactccctccaattccaaattccttacaaaatctctatcttatgccgctcccttcttcctcagcctt |
435 |
Q |
| |
|
|||||||| ||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
3416636 |
tgcatcccatggccaacatgtcacaatcatcaccactccctccaatgccaaatttcttacaaaatctctttcttatgccgctcccttcttcctccgcctt |
3416735 |
T |
 |
| Q |
436 |
cacaccgtcgacttcccctttcaacaaatggacctccctgaaggcattgaatctatatcctccaccactgaccttgtcaccacttggaagatcaacaatg |
535 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
3416736 |
cacaccgtcgactttccctttcaacaaatggacctccctgaaggcattgaatctatatcctccaccaccgacctcgtcaccacttggaagatcaacaatg |
3416835 |
T |
 |
| Q |
536 |
gcgcaatgctcctccatcgacccattgaggatttcattaaaaacgatccaccagattgtatcatctccgactctgcatacccatgggttaatga |
629 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3416836 |
gcgcaatgctcctccatcgacccattgaggatttcattaaaaacgatccaccagattgtatcatctccgactctgcatacccatgggttaatga |
3416929 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 126; Significance: 1e-64; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 244 - 549
Target Start/End: Complemental strand, 28386499 - 28386203
Alignment:
| Q |
244 |
ggtgttgaagtggaacgaccactgaaaattcacttcattccttatctagcatctagccatatgatccctctttgtgatatagcagctatgtttgcatccc |
343 |
Q |
| |
|
||||||||||| ||| ||||| ||||| ||||||||||||| |||| ||||||| | |||||||| || ||||||||||||||| || |||||||||| | |
|
|
| T |
28386499 |
ggtgttgaagttgaaagaccattgaaacttcacttcattccgtatccagcatctggacatatgatgccactttgtgatatagcaactttgtttgcatcac |
28386400 |
T |
 |
| Q |
344 |
gtggccaacatgtcgcaatcatcaccactccctccaattccaaattccttacaaaatctctatcttatgccgctcccttcttcctcagccttcacaccgt |
443 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||| || ||| |||||| ||| |||| || | |||||| |||| ||||||||||||| |
|
|
| T |
28386399 |
gtggccaacatgtcacaatcatcaccactccctccaatgcccaatcccttactaaaactctctcatctgccgc---------cctccgccttcacaccgt |
28386309 |
T |
 |
| Q |
444 |
cgacttcccctttcaacaaatggacctccctgaaggcattgaatctatatcctccaccactgaccttgtcaccacttggaagatcaacaatggcgcaatg |
543 |
Q |
| |
|
|| ||||||| ||||||| | ||||||||| ||||| |||| ||||| ||||||||||||||| | ||||||||||||||||| | |||||||||||| |
|
|
| T |
28386308 |
tgaattcccctatcaacaagtcgacctccctaaaggcgttgagtctatgacctccaccactgaccctatcaccacttggaagatccataatggcgcaatg |
28386209 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 237 - 629
Target Start/End: Complemental strand, 12541851 - 12541471
Alignment:
| Q |
237 |
aatggaaggtgttgaagtggaacgaccactgaaaattcacttcattccttatctagcatctagccatatgatccctctttgtgatatagcagctatgttt |
336 |
Q |
| |
|
|||||||||||||||||| || |||||| | ||||||||||||||||| ||| |||||||| | ||||||||||||||||||||||||||| || ||||| |
|
|
| T |
12541851 |
aatggaaggtgttgaagttgatcgaccattaaaaattcacttcattccatatttagcatctggacatatgatccctctttgtgatatagcaactttgttt |
12541752 |
T |
 |
| Q |
337 |
gcatcccgtggccaacatgtcgcaatcatcaccactccctccaattccaaattccttacaaaatctctatcttatgccgctcccttcttcctcagccttc |
436 |
Q |
| |
|
||||| | ||||||||| ||| ||||||||||||||||||||||| || |||||| |||||||| || | | |||||| ||||| |
|
|
| T |
12541751 |
gcatcacatggccaacaagtcacaatcatcaccactccctccaatgttgaaacccttaccaaatctct------------cccatccatcctcacccttc |
12541664 |
T |
 |
| Q |
437 |
acaccgtcgacttcccctttcaacaaatggacctccctgaaggcattgaatctatatcctccaccactgaccttgtcaccacttggaagatcaacaatgg |
536 |
Q |
| |
|
|||| ||||||||||||| ||||| | ||||||||| |||||||||||||||| |||||||||||||||| | ||| ||||||| || ||||||| |
|
|
| T |
12541663 |
acactgtcgacttcccctccgaacaagtcgacctccctaaaggcattgaatctatgtcctccaccactgaccccattacctcttggaaaattcacaatgg |
12541564 |
T |
 |
| Q |
537 |
cgcaatgctcctccatcgacccattgaggatttcattaaaaacgatccaccagattgtatcatctccgactctgcatacccatgggttaatga |
629 |
Q |
| |
|
||||||||||||||| |||||||||| ||||| || || ||||||| ||||||||||| |||||||| | ||| |||||| |||||| |
|
|
| T |
12541563 |
tgcaatgctcctccatggacccattgatgattttgttgtgaataatccacctgattgtatcattgccgactcttcttactcatggggtaatga |
12541471 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 80; Significance: 3e-37; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 226 - 501
Target Start/End: Complemental strand, 48959330 - 48959055
Alignment:
| Q |
226 |
aatttatcaacaatggaaggtgttgaagtggaacgaccactgaaaattcacttcattccttatctagcatctagccatatgatccctctttgtgatatag |
325 |
Q |
| |
|
||||||| | ||||||||||||||||||| || |||| ||||| ||||||||||||| |||| |||| || | ||||||||||| | ||||| |||| |
|
|
| T |
48959330 |
aatttataagcaatggaaggtgttgaagttgatagacctatgaaacttcacttcattccatatccagcacctgggcatatgatccccatgtgtgacatag |
48959231 |
T |
 |
| Q |
326 |
cagctatgtttgcatcccgtggccaacatgtcgcaatcatcaccactccctccaattccaaattccttacaaaatctctatcttatgccgctcccttctt |
425 |
Q |
| |
|
|| || |||||||||||| ||||||||| || |||||||||||||||||||||| ||| | ||| |||| |||||||| || || | ||||||||| |
|
|
| T |
48959230 |
caactctgtttgcatcccatggccaacaagtgacaatcatcaccactccctccaactcccacttctttaccaaatctctctcaagtgttgatcccttctt |
48959131 |
T |
 |
| Q |
426 |
cctcagccttcacaccgtcgacttcccctttcaacaaatggacctccctgaaggcattgaatctatatcctccacc |
501 |
Q |
| |
|
|||| |||||||| ||| |||| |||| |||||| | | ||||||||| ||| |||||||||| ||||||||| |
|
|
| T |
48959130 |
cctccgccttcaccttgtcaactttccctcccaacaagttggcctccctgacggcgttgaatctatgtcctccacc |
48959055 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 236 - 404
Target Start/End: Complemental strand, 48966508 - 48966340
Alignment:
| Q |
236 |
caatggaaggtgttgaagtggaacgaccactgaaaattcacttcattccttatctagcatctagccatatgatccctctttgtgatatagcagctatgtt |
335 |
Q |
| |
|
||||||||||||||||| | |||||||||||||| ||||||||||||| ||||||||| | |||||||||||||| | ||||| |||||| |||| || |
|
|
| T |
48966508 |
caatggaaggtgttgaaattaaacgaccactgaaacttcacttcattccatatctagcaccaggccatatgatccctatgtgtgacatagcaactatctt |
48966409 |
T |
 |
| Q |
336 |
tgcatcccgtggccaacatgtcgcaatcatcaccactccctccaattccaaattccttacaaaatctct |
404 |
Q |
| |
|
|||||| | ||||||||| ||| | |||||||| |||||||| || |||| |||||| | |||||||| |
|
|
| T |
48966408 |
tgcatctcatggccaacaagtcaccatcatcacaactccctctaacgccaacttcctttccaaatctct |
48966340 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 237 - 380
Target Start/End: Complemental strand, 48963461 - 48963318
Alignment:
| Q |
237 |
aatggaaggtgttgaagtggaacgaccactgaaaattcacttcattccttatctagcatctagccatatgatccctctttgtgatatagcagctatgttt |
336 |
Q |
| |
|
|||||| || |||||||| ||||||||| ||||| ||||||||||||| ||||| ||| || | |||||||| ||| | |||| ||||||||| ||||| |
|
|
| T |
48963461 |
aatggagggcgttgaagttgaacgaccattgaaacttcacttcattccatatcttgcacctggtcatatgattcctttgggtgacatagcagctctgttt |
48963362 |
T |
 |
| Q |
337 |
gcatcccgtggccaacatgtcgcaatcatcaccactccctccaa |
380 |
Q |
| |
|
|| |||||||||||||| ||| |||||||||||||||||||||| |
|
|
| T |
48963361 |
gcgtcccgtggccaacaagtcacaatcatcaccactccctccaa |
48963318 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 535 - 629
Target Start/End: Complemental strand, 48963162 - 48963068
Alignment:
| Q |
535 |
ggcgcaatgctcctccatcgacccattgaggatttcattaaaaacgatccaccagattgtatcatctccgactctgcatacccatgggttaatga |
629 |
Q |
| |
|
||||||||||||||||| |||| ||| |||||||||| | || |||||||| || || |||||| |||||| | ||||||||||||| |||| |
|
|
| T |
48963162 |
ggcgcaatgctcctccacggaccaattcaggatttcatggagaaggatccacctgactgcatcatcaccgactgtatatacccatgggtttatga |
48963068 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 64; Significance: 1e-27; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 217 - 380
Target Start/End: Original strand, 12482442 - 12482605
Alignment:
| Q |
217 |
aatagaataaatttatcaacaatggaaggtgttgaagtggaacgaccactgaaaattcacttcattccttatctagcatctagccatatgatccctcttt |
316 |
Q |
| |
|
|||||| | |||| ||| |||||||||||||||||||| ||||||||| ||||| ||||||||||||| | || |||| || | |||||||||||| | | |
|
|
| T |
12482442 |
aatagagtgaattgatctacaatggaaggtgttgaagttgaacgaccattgaaacttcacttcattccatttccagcacctgggcatatgatccctatgt |
12482541 |
T |
 |
| Q |
317 |
gtgatatagcagctatgtttgcatcccgtggccaacatgtcgcaatcatcaccactccctccaa |
380 |
Q |
| |
|
| | || ||| || |||||||||| |||||||| |||||| |||||||||||||||| ||||| |
|
|
| T |
12482542 |
gcaagattgcaactctgtttgcatcacgtggccatcatgtcacaatcatcaccactccttccaa |
12482605 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 236 - 376
Target Start/End: Original strand, 12589193 - 12589333
Alignment:
| Q |
236 |
caatggaaggtgttgaagtggaacgaccactgaaaattcacttcattccttatctagcatctagccatatgatccctctttgtgatatagcagctatgtt |
335 |
Q |
| |
|
||||| |||| |||||| | |||| |||| | ||| ||||||||||||| |||||| || || | |||||||||||||| ||||| || ||| | |||| |
|
|
| T |
12589193 |
caatgaaaggcgttgaaattgaacaaccattaaaacttcacttcattccatatctatcacctgggcatatgatccctctatgtgacattgcaaccctgtt |
12589292 |
T |
 |
| Q |
336 |
tgcatcccgtggccaacatgtcgcaatcatcaccactccct |
376 |
Q |
| |
|
|||||||||||||||||| ||| |||||| ||||||||||| |
|
|
| T |
12589293 |
tgcatcccgtggccaacaagtcacaatcaccaccactccct |
12589333 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 288 - 517
Target Start/End: Original strand, 12640539 - 12640768
Alignment:
| Q |
288 |
tctagcatctagccatatgatccctctttgtgatatagcagctatgtttgcatcccgtggccaacatgtcgcaatcatcaccactccctccaattccaaa |
387 |
Q |
| |
|
||||||| || | |||||||| ||| | |||| ||||||||| |||||||||||| ||||||||| ||| | |||||||||||||||||||| || | |
|
|
| T |
12640539 |
tctagcacctggtcatatgattcctttgggtgacatagcagctttgtttgcatcccatggccaacaagtcacgatcatcaccactccctccaacgcccat |
12640638 |
T |
 |
| Q |
388 |
ttccttacaaaatctctatcttatgccgctcccttcttcctcagccttcacaccgtcgacttcccctttcaacaaatggacctccctgaaggcattgaat |
487 |
Q |
| |
|
||| |||| |||||||| || | | || ||| || |||||| |||||||||||||||||||||||| |||||| | || || || || ||| |||||| |
|
|
| T |
12640639 |
ttctttaccaaatctctctccttcgtcgatccgtttttcctccgccttcacaccgtcgacttcccctcccaacaagtcgatcttcccgacggcgttgaat |
12640738 |
T |
 |
| Q |
488 |
ctatatcctccaccactgaccttgtcacca |
517 |
Q |
| |
|
| | |||||||||||| ||| || ||||| |
|
|
| T |
12640739 |
cattgtcctccaccactaaccctgacacca |
12640768 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University