View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21324_low_15 (Length: 299)

Name: NF21324_low_15
Description: NF21324
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21324_low_15
NF21324_low_15
[»] chr3 (35 HSPs)
chr3 (1-255)||(7975228-7975480)
chr3 (1-64)||(30311305-30311368)
chr3 (1-64)||(46518627-46518690)
chr3 (4-63)||(4222141-4222200)
chr3 (1-64)||(15048075-15048138)
chr3 (1-67)||(31520619-31520685)
chr3 (1-63)||(31788984-31789046)
chr3 (3-64)||(32651454-32651514)
chr3 (1-65)||(27093375-27093439)
chr3 (1-53)||(8075141-8075193)
chr3 (6-66)||(26988993-26989052)
chr3 (4-60)||(28928896-28928952)
chr3 (1-64)||(36720380-36720443)
chr3 (1-60)||(39253701-39253759)
chr3 (7-65)||(10499129-10499187)
chr3 (1-63)||(14186648-14186709)
chr3 (5-63)||(16354910-16354968)
chr3 (5-63)||(27923061-27923119)
chr3 (1-66)||(5499421-5499486)
chr3 (1-53)||(2667872-2667924)
chr3 (1-63)||(10445153-10445216)
chr3 (4-51)||(14339622-14339669)
chr3 (1-64)||(18319182-18319245)
chr3 (1-60)||(53412948-53413007)
chr3 (13-63)||(203090-203140)
chr3 (1-63)||(28703418-28703480)
chr3 (1-63)||(37788479-37788541)
chr3 (1-62)||(47454631-47454692)
chr3 (6-63)||(51903897-51903954)
chr3 (7-63)||(2597240-2597296)
chr3 (1-53)||(4844525-4844577)
chr3 (1-53)||(4870221-4870273)
chr3 (3-63)||(19341801-19341861)
chr3 (3-63)||(26505377-26505437)
chr3 (4-52)||(47860767-47860815)
[»] chr7 (46 HSPs)
chr7 (1-61)||(7744126-7744186)
chr7 (1-63)||(18363696-18363758)
chr7 (1-63)||(26459424-26459486)
chr7 (4-63)||(25021352-25021411)
chr7 (2-63)||(42836016-42836077)
chr7 (1-66)||(43215181-43215246)
chr7 (1-64)||(17041026-17041089)
chr7 (1-64)||(23552117-23552180)
chr7 (1-63)||(30442488-30442550)
chr7 (1-63)||(39631844-39631906)
chr7 (7-63)||(48771938-48771994)
chr7 (3-46)||(9608645-9608688)
chr7 (3-46)||(9836217-9836260)
chr7 (1-64)||(45709722-45709785)
chr7 (1-60)||(45976937-45976996)
chr7 (1-63)||(17113795-17113857)
chr7 (1-63)||(19553454-19553515)
chr7 (1-63)||(22760863-22760925)
chr7 (1-43)||(29785315-29785357)
chr7 (4-61)||(21854550-21854607)
chr7 (1-58)||(41519278-41519335)
chr7 (1-64)||(11720974-11721037)
chr7 (4-63)||(23735244-23735303)
chr7 (1-64)||(30579334-30579397)
chr7 (4-63)||(43590907-43590966)
chr7 (1-63)||(5273604-5273666)
chr7 (1-63)||(5579248-5579310)
chr7 (1-63)||(7801180-7801242)
chr7 (1-63)||(15137553-15137615)
chr7 (1-63)||(20335845-20335907)
chr7 (1-63)||(25590611-25590673)
chr7 (9-63)||(25956314-25956368)
chr7 (1-63)||(31835192-31835254)
chr7 (1-63)||(33869459-33869521)
chr7 (9-63)||(39499741-39499795)
chr7 (4-46)||(48984146-48984188)
chr7 (7-60)||(15905693-15905746)
chr7 (1-62)||(22927477-22927538)
chr7 (6-63)||(27776172-27776229)
chr7 (11-64)||(33181234-33181287)
chr7 (3-64)||(35119382-35119443)
chr7 (1-66)||(42711955-42712020)
chr7 (7-63)||(23301622-23301678)
chr7 (7-63)||(24513797-24513853)
chr7 (1-65)||(25655242-25655306)
chr7 (9-65)||(41487360-41487416)
[»] chr6 (19 HSPs)
chr6 (1-64)||(12188317-12188380)
chr6 (1-65)||(33549102-33549166)
chr6 (1-63)||(3779339-3779401)
chr6 (9-63)||(34877095-34877149)
chr6 (1-62)||(6758436-6758497)
chr6 (6-59)||(6776626-6776679)
chr6 (11-64)||(12234531-12234584)
chr6 (1-64)||(10338188-10338251)
chr6 (4-47)||(20213057-20213100)
chr6 (4-47)||(22107080-22107123)
chr6 (1-52)||(28363948-28363999)
chr6 (1-64)||(31623005-31623068)
chr6 (1-63)||(15951316-15951378)
chr6 (1-63)||(24641204-24641266)
chr6 (9-63)||(30127400-30127454)
chr6 (3-61)||(32613156-32613214)
chr6 (6-63)||(21418470-21418527)
chr6 (1-53)||(24507550-24507602)
chr6 (4-60)||(34293833-34293889)
[»] chr2 (24 HSPs)
chr2 (1-64)||(34041602-34041665)
chr2 (1-63)||(16381668-16381730)
chr2 (1-63)||(42327409-42327471)
chr2 (1-62)||(16918592-16918653)
chr2 (1-64)||(29503270-29503333)
chr2 (1-64)||(42602553-42602616)
chr2 (1-65)||(14500275-14500339)
chr2 (1-64)||(11251086-11251149)
chr2 (1-64)||(37480074-37480137)
chr2 (4-63)||(42922414-42922473)
chr2 (1-67)||(21195690-21195756)
chr2 (1-63)||(23052537-23052599)
chr2 (1-61)||(12086143-12086203)
chr2 (1-64)||(1729815-1729878)
chr2 (1-63)||(4438993-4439055)
chr2 (6-63)||(28846691-28846748)
chr2 (6-65)||(7799054-7799113)
chr2 (1-64)||(19322767-19322830)
chr2 (1-64)||(39714991-39715054)
chr2 (1-63)||(1435064-1435126)
chr2 (7-65)||(3001377-3001435)
chr2 (1-63)||(5147693-5147755)
chr2 (1-63)||(11062360-11062422)
chr2 (1-63)||(40416404-40416466)
[»] chr4 (30 HSPs)
chr4 (1-63)||(37109365-37109427)
chr4 (1-63)||(4249177-4249239)
chr4 (1-63)||(31826609-31826671)
chr4 (3-64)||(51250538-51250599)
chr4 (1-48)||(38869783-38869830)
chr4 (1-63)||(8030218-8030280)
chr4 (14-64)||(27965537-27965587)
chr4 (6-63)||(2606436-2606493)
chr4 (1-65)||(37720228-37720292)
chr4 (3-63)||(46545711-46545771)
chr4 (1-64)||(7949468-7949531)
chr4 (1-63)||(37274473-37274536)
chr4 (1-63)||(9241039-9241101)
chr4 (1-63)||(19238591-19238653)
chr4 (1-63)||(31759672-31759734)
chr4 (9-63)||(37443702-37443756)
chr4 (4-60)||(7292815-7292871)
chr4 (1-53)||(49576908-49576960)
chr4 (4-63)||(1730506-1730565)
chr4 (1-64)||(19680802-19680865)
chr4 (9-63)||(15180741-15180795)
chr4 (7-53)||(29312272-29312318)
chr4 (1-63)||(39509070-39509132)
chr4 (6-63)||(2622414-2622475)
chr4 (1-56)||(5450097-5450155)
chr4 (1-65)||(12798682-12798746)
chr4 (1-45)||(23377974-23378018)
chr4 (7-63)||(28635696-28635752)
chr4 (9-65)||(29195093-29195149)
chr4 (7-63)||(33619206-33619262)
[»] chr1 (34 HSPs)
chr1 (1-63)||(2799862-2799924)
chr1 (1-61)||(33700787-33700847)
chr1 (1-52)||(8177196-8177247)
chr1 (4-63)||(9165212-9165271)
chr1 (1-64)||(36371469-36371532)
chr1 (1-67)||(25297768-25297834)
chr1 (1-63)||(31794278-31794340)
chr1 (4-64)||(6650594-6650654)
chr1 (1-65)||(41508829-41508893)
chr1 (1-64)||(6122793-6122856)
chr1 (1-60)||(15786334-15786393)
chr1 (1-63)||(19528341-19528403)
chr1 (7-52)||(52336794-52336839)
chr1 (1-45)||(44046162-44046206)
chr1 (5-64)||(4566547-4566606)
chr1 (1-64)||(8904413-8904476)
chr1 (1-60)||(24730387-24730446)
chr1 (4-63)||(30420310-30420369)
chr1 (1-64)||(40257398-40257461)
chr1 (4-63)||(51703779-51703838)
chr1 (10-66)||(26232409-26232465)
chr1 (7-63)||(30689012-30689068)
chr1 (1-65)||(51814492-51814556)
chr1 (6-53)||(17410241-17410288)
chr1 (1-64)||(21547494-21547557)
chr1 (1-63)||(50901581-50901644)
chr1 (4-63)||(52116798-52116857)
chr1 (1-63)||(10526823-10526885)
chr1 (4-61)||(15904612-15904670)
chr1 (1-63)||(16169992-16170054)
chr1 (1-59)||(17745270-17745328)
chr1 (12-65)||(39012289-39012342)
chr1 (1-33)||(17439947-17439979)
chr1 (7-64)||(31049608-31049669)
[»] chr8 (30 HSPs)
chr8 (1-61)||(2203494-2203554)
chr8 (7-63)||(6569791-6569847)
chr8 (1-64)||(16852339-16852402)
chr8 (1-64)||(19703501-19703564)
chr8 (1-61)||(3624582-3624642)
chr8 (1-64)||(44780128-44780191)
chr8 (1-63)||(11819776-11819838)
chr8 (1-63)||(18540298-18540360)
chr8 (5-63)||(30483902-30483960)
chr8 (9-61)||(7286209-7286261)
chr8 (1-65)||(12988426-12988490)
chr8 (1-64)||(5264543-5264606)
chr8 (8-63)||(20994479-20994534)
chr8 (1-64)||(28783059-28783122)
chr8 (1-52)||(35690078-35690129)
chr8 (1-63)||(968362-968424)
chr8 (1-63)||(23361663-23361725)
chr8 (1-63)||(26688865-26688927)
chr8 (1-63)||(27750730-27750792)
chr8 (1-69)||(18897160-18897228)
chr8 (4-63)||(28898506-28898565)
chr8 (1-56)||(29915934-29915989)
chr8 (1-52)||(43594332-43594383)
chr8 (1-63)||(11518891-11518953)
chr8 (1-63)||(23874396-23874458)
chr8 (6-64)||(35641920-35641978)
chr8 (1-63)||(6536514-6536582)
chr8 (1-62)||(29858063-29858124)
chr8 (8-64)||(3826798-3826854)
chr8 (7-63)||(29431011-29431067)
[»] chr5 (24 HSPs)
chr5 (1-64)||(87437-87500)
chr5 (1-64)||(30883212-30883275)
chr5 (1-63)||(16457810-16457872)
chr5 (6-63)||(29075781-29075838)
chr5 (7-63)||(21549157-21549213)
chr5 (1-64)||(34984805-34984868)
chr5 (1-63)||(25627057-25627119)
chr5 (1-64)||(14285160-14285223)
chr5 (1-64)||(16436617-16436679)
chr5 (9-64)||(26598523-26598578)
chr5 (1-63)||(7918483-7918545)
chr5 (7-65)||(22020882-22020940)
chr5 (4-64)||(29692403-29692463)
chr5 (7-63)||(43230794-43230852)
chr5 (1-52)||(43442207-43442258)
chr5 (1-35)||(84852-84886)
chr5 (1-63)||(892488-892550)
chr5 (1-63)||(14495819-14495881)
chr5 (1-63)||(17028278-17028340)
chr5 (7-64)||(30109328-30109385)
chr5 (1-50)||(37258380-37258429)
chr5 (4-60)||(18437088-18437144)
chr5 (8-64)||(22737081-22737137)
chr5 (12-56)||(42756785-42756829)
[»] scaffold0172 (2 HSPs)
scaffold0172 (1-64)||(32783-32846)
scaffold0172 (1-64)||(15791-15854)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-60)||(94985-95044)
[»] scaffold0258 (1 HSPs)
scaffold0258 (1-63)||(15337-15399)
[»] scaffold0194 (1 HSPs)
scaffold0194 (1-59)||(13060-13118)
[»] scaffold0118 (1 HSPs)
scaffold0118 (1-63)||(41647-41709)
[»] scaffold0086 (1 HSPs)
scaffold0086 (5-63)||(47382-47440)
[»] scaffold0299 (1 HSPs)
scaffold0299 (1-50)||(11541-11590)
[»] scaffold0300 (1 HSPs)
scaffold0300 (1-53)||(4350-4402)
[»] scaffold0180 (1 HSPs)
scaffold0180 (1-52)||(19976-20027)
[»] scaffold0178 (1 HSPs)
scaffold0178 (4-63)||(6651-6710)
[»] scaffold0013 (1 HSPs)
scaffold0013 (1-64)||(91124-91187)
[»] scaffold0291 (1 HSPs)
scaffold0291 (1-43)||(2484-2526)
[»] scaffold0070 (1 HSPs)
scaffold0070 (5-63)||(42538-42596)
[»] scaffold0063 (1 HSPs)
scaffold0063 (1-63)||(35403-35465)
[»] scaffold0122 (1 HSPs)
scaffold0122 (4-53)||(6936-6985)
[»] scaffold1367 (1 HSPs)
scaffold1367 (6-50)||(859-903)
[»] scaffold0337 (1 HSPs)
scaffold0337 (1-53)||(1763-1815)
[»] scaffold0065 (1 HSPs)
scaffold0065 (1-53)||(12199-12251)


Alignment Details
Target: chr3 (Bit Score: 179; Significance: 1e-96; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 7975480 - 7975228
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtttttagggtttgaatcttgattcaatatgctataaaga 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||  ||||||||    
T  7975480 accttgaggaggagcacactcccagatcccaagcctataccactaggccaacctaaatgggtttttagggtttgaatcttgattcatcatattataaaga 7975381  T
Q  101 tctaaccccttccactagacccaacatcagttgatttctttcaagtaaaatttaattgcatacttttaaataaataattaagttagaaacattgatttgt 200  Q
    ||||| || |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||| |  |||||||||||||||||    
T  7975380 tctaa-cctttccactagacccaacatcagttgatttgtttcaggtaaaatttaattgcatacttctaaataaataatt-atatagaaacattgatttgt 7975283  T
Q  201 tttagtttaacaaaactgttgctctatcaattattttctttcttccatctgtttt 255  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||| ||||    
T  7975282 tttagtttaacaaaactgttactctatcaattattttgtttcttccatctatttt 7975228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 30311368 - 30311305
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||    
T  30311368 accttgaggaggagcacactcccagatcccaagcctataccactaggccaacccaggtgggttt 30311305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 46518690 - 46518627
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| ||||||||||    
T  46518690 accttgaggaggagcacactcccagatcccaagccaataccactatgccaacccaagtgggttt 46518627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 4222200 - 4222141
Alignment:
Q  4 ttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||||||||||||||||||| ||||| ||||||||| ||||||| |||||||||    
T  4222200 ttgaggaggagcacactcccagatcccaagccaataccactaagccaacccaagtgggtt 4222141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 15048075 - 15048138
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    |||||||||||||||||| |||||||||| |||||||||||| || ||||||| ||||||||||    
T  15048075 accttgaggaggagcacattcccagatcccaagcctataccattaagccaacccaagtgggttt 15048138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 31520619 - 31520685
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttttta 67  Q
    |||| |||||||||||||||||||||||| ||||| || |||| ||||||||| |||||||||||||    
T  31520619 acctcgaggaggagcacactcccagatcccaagccaatgccaccaggccaacccaagtgggttttta 31520685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 31788984 - 31789046
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||| |||||||||||||||||||||||| ||||| ||| ||||||||||||| |||||||||    
T  31788984 acctcgaggaggagcacactcccagatcccaagccaataacactaggccaacccaagtgggtt 31789046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 32651454 - 32651514
Alignment:
Q  3 cttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    ||||||||||||||||||||||| ||| ||||| ||||||||||||||| ||||||||||||    
T  32651454 cttgaggaggagcacactcccaggtcccaagccaataccactaggccaa-ctaagtgggttt 32651514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 27093375 - 27093439
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtttt 65  Q
    ||||||||||||||||||||||||  | | ||||| ||||||||||||||||| |||||||||||    
T  27093375 accttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgggtttt 27093439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 8075141 - 8075193
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacc 53  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||| |||||    
T  8075141 accttgaggaggagcacactcccaagtcccaagcctataccactagggcaacc 8075193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 26989052 - 26988993
Alignment:
Q  6 gaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttttt 66  Q
    ||||||||||| |||| ||||||| ||||| ||||||||||||||||| ||||||||||||    
T  26989052 gaggaggagcaaactctcagatcc-aagccaataccactaggccaacccaagtgggttttt 26988993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 28928896 - 28928952
Alignment:
Q  4 ttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgg 60  Q
    |||||||||||||||||| ||||||| ||||| ||||||||||||||| | ||||||    
T  28928896 ttgaggaggagcacactctcagatcccaagccaataccactaggccaatccaagtgg 28928952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 36720443 - 36720380
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    |||| ||||||||||||||||||| |||| ||||| ||||||| || |||||| ||||||||||    
T  36720443 acctcgaggaggagcacactcccatatcccaagccaataccaccagaccaacccaagtgggttt 36720380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 39253759 - 39253701
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgg 60  Q
    ||||||| ||||||||||||||||||||| ||| ||| ||||||||| ||||||||||||    
T  39253759 accttgaagaggagcacactcccagatcccaagtcta-accactaggtcaacctaagtgg 39253701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 10499129 - 10499187
Alignment:
Q  7 aggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtttt 65  Q
    |||| ||||| |||||||||||| ||||| ||||||| ||||||||| |||||||||||    
T  10499129 aggaagagcagactcccagatcccaagccaataccaccaggccaacccaagtgggtttt 10499187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 14186709 - 14186648
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||||||||||||||| || ||| ||| | ||||||||||||||||| |||||||||    
T  14186709 accttgaggaggagcacactcc-aggtcccaagacaataccactaggccaacccaagtgggtt 14186648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 16354910 - 16354968
Alignment:
Q  5 tgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||||||||||||||| ||| | | ||||| ||||||||||||||||| |||||||||    
T  16354910 tgaggaggagcacactcacaggttccaagccaataccactaggccaacccaagtgggtt 16354968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 27923061 - 27923119
Alignment:
Q  5 tgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||||||||| |||  ||| ||||| ||||||| |||||||||||||||||||    
T  27923061 tgaggaggagcacacttccatgtcccaagccaataccaccaggccaacctaagtgggtt 27923119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 5499421 - 5499486
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttttt 66  Q
    ||||| ||||||||||||||| ||||||  ||| | ||||||| ||||||||| ||||||||||||    
T  5499421 accttaaggaggagcacactctcagatctcaagtcaataccaccaggccaacccaagtgggttttt 5499486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 2667924 - 2667872
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacc 53  Q
    |||| ||||| |||||||||||||||||| ||||| ||||||| |||||||||    
T  2667924 acctcgaggaagagcacactcccagatcccaagccaataccaccaggccaacc 2667872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 10445153 - 10445216
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagccta-taccactaggccaacctaagtgggtt 63  Q
    |||| |||||||||||||||||||| ||| ||||| | | |||||||||||||| |||||||||    
T  10445153 acctcgaggaggagcacactcccaggtcccaagccaattgccactaggccaacccaagtgggtt 10445216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 14339669 - 14339622
Alignment:
Q  4 ttgaggaggagcacactcccagatcctaagcctataccactaggccaa 51  Q
    ||||||||||||||||||||| |||| ||||| ||||||| |||||||    
T  14339669 ttgaggaggagcacactcccaaatcccaagccaataccaccaggccaa 14339622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 18319182 - 18319245
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    ||||||| ||||||||||||||||| ||| || || ||||||| | |||||||||||| |||||    
T  18319182 accttgaagaggagcacactcccaggtcccaaaccaataccaccaagccaacctaagtaggttt 18319245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 53413007 - 53412948
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgg 60  Q
    ||||||||||||||||||||||||| |   ||||| |||||||||| |||||| ||||||    
T  53413007 accttgaggaggagcacactcccaggttacaagccaataccactagaccaacccaagtgg 53412948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 203140 - 203090
Alignment:
Q  13 agcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||||||||| ||||| ||| | ||||||||||||||||| |||||||||    
T  203140 agcacactccctgatcccaagtcaataccactaggccaacccaagtgggtt 203090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 28703418 - 28703480
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||||| ||||||||||||||||||||| ||||  ||| |||| | |||||| |||||||||    
T  28703418 accttgaagaggagcacactcccagatcccaagctaatatcactggaccaacccaagtgggtt 28703480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 37788479 - 37788541
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||||||||||||||| || | | ||| | |||||||| |||||||| |||||||||    
T  37788479 accttgaggaggagcacactcctaggttccaagtcaataccactgggccaacccaagtgggtt 37788541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 47454631 - 47454692
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggt 62  Q
    |||| ||||||||||||||||| |||||  ||||| ||||||||||  ||||| ||||||||    
T  47454631 acctcgaggaggagcacactccaagatctcaagccaataccactagaacaacccaagtgggt 47454692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 51903897 - 51903954
Alignment:
Q  6 gaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||||||||||||||||| ||||| ||||||  ||| ||||| | |||||||    
T  51903897 gaggaggagcacactcccagatcccaagccaataccaacaggtcaacccaggtgggtt 51903954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 2597240 - 2597296
Alignment:
Q  7 aggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||||||||| | |||| ||||| ||||||| || |||||| |||||||||    
T  2597240 aggaggagcacactcctaaatccgaagccaataccaccagaccaacccaagtgggtt 2597296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 4844525 - 4844577
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacc 53  Q
    |||| |||||||||||||||||||||||| ||| | ||||||| || ||||||    
T  4844525 acctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaacc 4844577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 4870221 - 4870273
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacc 53  Q
    |||| |||||||||||||||||||||||| ||| | ||||||| || ||||||    
T  4870221 acctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaacc 4870273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 19341861 - 19341801
Alignment:
Q  3 cttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||||||||||||||||||||  ||  ||| ||||||||||||| ||||| || ||||||    
T  19341861 cttgaggaggagcacactcccaagtctcaagtctataccactagggcaacccaaatgggtt 19341801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 26505377 - 26505437
Alignment:
Q  3 cttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||| |||||||||||| ||| |||| |||||||||||||| | |||| | |||||||||    
T  26505377 cttgaagaggagcacacttccatatcccaagcctataccactggaccaatccaagtgggtt 26505437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 47860815 - 47860767
Alignment:
Q  4 ttgaggaggagcacactcccagatcctaagcctataccactaggccaac 52  Q
    ||||||||||||||||||| |||||| ||||| |||| ||||| |||||    
T  47860815 ttgaggaggagcacactcctagatccaaagccaatacaactagaccaac 47860767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7744126 - 7744186
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtggg 61  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  7744126 accttgaggaggagcatagtcccagatcctaagcctataccactaggccaacctaagtggg 7744186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 18363758 - 18363696
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||||||||||||||||| |||  ||||||||||||||||||||||| |||||||||    
T  18363758 accttgaggaggagcacactcccaaatctcaagcctataccactaggccaacccaagtgggtt 18363696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 26459424 - 26459486
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||||||||||||| |||||||||    
T  26459424 accttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 26459486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 25021352 - 25021411
Alignment:
Q  4 ttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||||||||||||||| ||| ||||| ||||||||||||||||| |||||||||    
T  25021352 ttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 25021411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 42836016 - 42836077
Alignment:
Q  2 ccttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||||||| |||||||||||||| ||| ||||| ||||||||||||||||| |||||||||    
T  42836016 ccttgaggaagagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 42836077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 43215246 - 43215181
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttttt 66  Q
    |||||||||||||||||||||| || ||| ||||| |||||||||| |||||| ||||||||||||    
T  43215246 accttgaggaggagcacactccgaggtcccaagccaataccactagaccaacccaagtgggttttt 43215181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 17041026 - 17041089
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    |||||||||||||||||||| |||||||| ||||| || ||||||| |||||| ||||||||||    
T  17041026 accttgaggaggagcacacttccagatcccaagccaatgccactagaccaacccaagtgggttt 17041089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 23552180 - 23552117
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    ||||||||||||||||||||||||| ||| ||| | ||| ||||||||||||| ||||||||||    
T  23552180 accttgaggaggagcacactcccaggtcccaagtcaatagcactaggccaacccaagtgggttt 23552117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 30442550 - 30442488
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||||||||| |||||||| ||| ||||| |||||||| |||||||| |||||||||    
T  30442550 accttgaggaggagcaaactcccaggtcccaagccaataccactgggccaacccaagtgggtt 30442488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 39631906 - 39631844
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||||||||  |||||||| ||| ||||| ||||||||||||||||| |||||||||    
T  39631906 accttgaggaggagcttactcccaggtcccaagccaataccactaggccaacccaagtgggtt 39631844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 48771994 - 48771938
Alignment:
Q  7 aggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||||||||||||||||||||| ||||| ||||||| | ||||||| |||||||||    
T  48771994 aggaggagcacactcccagatcccaagccaataccaccaagccaacccaagtgggtt 48771938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 9608645 - 9608688
Alignment:
Q  3 cttgaggaggagcacactcccagatcctaagcctataccactag 46  Q
    |||||||||||| |||||||||||||| ||||||||||||||||    
T  9608645 cttgaggaggaggacactcccagatcccaagcctataccactag 9608688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 9836217 - 9836260
Alignment:
Q  3 cttgaggaggagcacactcccagatcctaagcctataccactag 46  Q
    |||||||||||| |||||||||||||| ||||||||||||||||    
T  9836217 cttgaggaggaggacactcccagatcccaagcctataccactag 9836260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 45709722 - 45709785
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||| || |||||||    
T  45709722 acctcgaggaggagcacactctcagatcccaagctaataccactaggccaacccaaatgggttt 45709785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 45976937 - 45976996
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgg 60  Q
    ||||| ||||||||||||||||||| ||  ||||| ||||||||||||||||| ||||||    
T  45976937 accttaaggaggagcacactcccaggtcacaagccaataccactaggccaacccaagtgg 45976996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 17113857 - 17113795
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||||||||| ||||||||||||| | ||||||| |||| ||||||||| || |||||||||    
T  17113857 accttgaggagaagcacactcccaggttctaagccaatacaactaggccaccccaagtgggtt 17113795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 19553515 - 19553454
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||| ||||||||| ||| |||||    
T  19553515 accttgaggaggagcacactcccaggtcc-aagccaataccaccaggccaacccaagcgggtt 19553454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 22760925 - 22760863
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||||||||||||||||||||||| ||| ||| | ||||||| || |||||| |||||||||    
T  22760925 accttgaggaggagcacactcccaggtcccaagtcaataccaccagaccaacccaagtgggtt 22760863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 29785315 - 29785357
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccac 43  Q
    |||||||||||||||||||| |||||||| |||||||||||||    
T  29785315 accttgaggaggagcacacttccagatcccaagcctataccac 29785357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 21854607 - 21854550
Alignment:
Q  4 ttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtggg 61  Q
    ||||||||||||||||||||||||||  |||| ||||||  ||||||||| |||||||    
T  21854607 ttgaggaggagcacactcccagatccctagccaataccatcaggccaacccaagtggg 21854550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 41519278 - 41519335
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagt 58  Q
    |||||||||||||||||||||| | |||| ||| | ||||||||||||||||| ||||    
T  41519278 accttgaggaggagcacactcctaaatcccaagtcaataccactaggccaacccaagt 41519335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 11720974 - 11721037
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    ||||| |||||||||||| |||||| ||| ||||| ||||||| ||||||||| |||| |||||    
T  11720974 accttaaggaggagcacattcccaggtcccaagccaataccaccaggccaaccgaagttggttt 11721037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 23735244 - 23735303
Alignment:
Q  4 ttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||||||||||||| ||||| || ||||||| ||||||||||  ||||| |||||||||    
T  23735244 ttgaggaggagcacaatcccaaattctaagccaataccactagatcaacccaagtgggtt 23735303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 30579397 - 30579334
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    |||||||||||| | |||||||||| ||  ||||| ||||||| ||||||||| ||||||||||    
T  30579397 accttgaggaggtggacactcccaggtctcaagccaataccaccaggccaacccaagtgggttt 30579334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 43590966 - 43590907
Alignment:
Q  4 ttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||||||||||||||  ||| ||||| ||||||| ||||||||| || ||||||    
T  43590966 ttgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaactgggtt 43590907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 5273604 - 5273666
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||||||||||||||  || ||| ||||| | ||||| ||||||||| |||||||||    
T  5273604 accttgaggaggagcacactctaaggtcccaagccaacaccaccaggccaacccaagtgggtt 5273666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 5579248 - 5579310
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||||||||||||||| || ||| ||||| | ||||| ||| ||||| |||||||||    
T  5579248 accttgaggaggagcacactccaaggtcccaagccaacaccaccaggtcaacccaagtgggtt 5579310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 7801242 - 7801180
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||||| ||||||||||||||||| ||| ||| | ||||||| ||||||| | |||||||||    
T  7801242 accttgaagaggagcacactcccaggtcccaagtcaataccaccaggccaaaccaagtgggtt 7801180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 15137615 - 15137553
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||||||||||||||| | |||| ||| |  |||||| ||||||||| |||||||||    
T  15137615 accttgaggaggagcacactcctaaatcccaagtcagtaccaccaggccaacccaagtgggtt 15137553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 20335845 - 20335907
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||| |||||||||||||||||||  ||| ||||| ||||| |||| |||||| |||||||||    
T  20335845 acctcgaggaggagcacactcccaagtcccaagccaatacctctagaccaacccaagtgggtt 20335907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 25590673 - 25590611
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||| |||||||||||||||||||||||  ||||| ||||||  ||| ||||| |||||||||    
T  25590673 acctcgaggaggagcacactcccagatctcaagccaataccaacaggtcaacccaagtgggtt 25590611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 25956314 - 25956368
Alignment:
Q  9 gaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||||||| || ||| ||||| ||||||||||||||||| || ||||||    
T  25956314 gaggagcacactccaaggtcccaagccaataccactaggccaacccaaatgggtt 25956368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 31835254 - 31835192
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||||||||||||||| ||  || ||||| | ||||| ||||||||| |||||||||    
T  31835254 accttgaggaggagcacactccaagcacccaagccaacaccaccaggccaacccaagtgggtt 31835192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 33869459 - 33869521
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||| ||||||||||| |||| ||  ||||| |||| |||||||||||| |||||||||    
T  33869459 accttgagaaggagcacacttccaggtctcaagccaatactactaggccaacccaagtgggtt 33869521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 39499741 - 39499795
Alignment:
Q  9 gaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||| ||||||| ||| ||| ||||| ||||||||||||||||| |||||||||    
T  39499741 gaggaacacactcacaggtcccaagccaataccactaggccaacccaagtgggtt 39499795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 48984146 - 48984188
Alignment:
Q  4 ttgaggaggagcacactcccagatcctaagcctataccactag 46  Q
    |||||||||||||||||||||  ||| ||||||||||||||||    
T  48984146 ttgaggaggagcacactcccaagtcccaagcctataccactag 48984188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 15905693 - 15905746
Alignment:
Q  7 aggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgg 60  Q
    ||||||||||||||||||| ||| ||||| ||||| | ||||||||| ||||||    
T  15905693 aggaggagcacactcccaggtcccaagccaataccgccaggccaacccaagtgg 15905746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22927538 - 22927477
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggt 62  Q
    ||||| ||||| |||||||||| |||||| |||   ||||||||||||||||| ||||||||    
T  22927538 acctttaggagaagcacactcctagatcccaagttaataccactaggccaacccaagtgggt 22927477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 27776229 - 27776172
Alignment:
Q  6 gaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||||||||| ||  ||| |||| |||||||| ||||||||| |||||||||    
T  27776229 gaggaggagcacactctcaagtcccaagcgtataccaccaggccaacccaagtgggtt 27776172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 33181234 - 33181287
Alignment:
Q  11 ggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    ||||||||||||||  ||| ||||||||||||||||| ||||| || |||||||    
T  33181234 ggagcacactcccaagtcccaagcctataccactagggcaacccaaatgggttt 33181287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 35119443 - 35119382
Alignment:
Q  3 cttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    |||||||| ||||| || ||||||||| ||| | ||||||||||||||||| || |||||||    
T  35119443 cttgaggatgagcatacacccagatcccaagtcaataccactaggccaacccaaatgggttt 35119382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 42712020 - 42711955
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttttt 66  Q
    ||||||||||||||||||||||||  | | ||||  ||||||||| ||||||| ||||| ||||||    
T  42712020 accttgaggaggagcacactcccatgtaccaagctaataccactaagccaacccaagtgagttttt 42711955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 23301622 - 23301678
Alignment:
Q  7 aggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||||||||||||||||  ||| ||| | ||||||| ||||||||| |||||||||    
T  23301622 aggaggagcacactcccaagtcccaagtcaataccaccaggccaacccaagtgggtt 23301678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 24513853 - 24513797
Alignment:
Q  7 aggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||| || ||||||||| |||  ||||| ||||||||||||||||| |||||||||    
T  24513853 aggagaagtacactcccaaatctcaagccaataccactaggccaacccaagtgggtt 24513797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 25655242 - 25655306
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtttt 65  Q
    ||||||||||||| ||||||| ||||||| ||| | |||||||||  |||||| | |||||||||    
T  25655242 accttgaggaggatcacactcacagatcccaagtcaataccactaaaccaacccaggtgggtttt 25655306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 41487416 - 41487360
Alignment:
Q  9 gaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtttt 65  Q
    |||||| |||||||||  ||| ||||| ||||||| ||||||||| |||||||||||    
T  41487416 gaggagaacactcccaagtcccaagccaataccaccaggccaacccaagtgggtttt 41487360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 12188317 - 12188380
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||||||||||||| ||||||||||    
T  12188317 accttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttt 12188380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 33549166 - 33549102
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtttt 65  Q
    |||| |||||||||||||||||||| ||| ||||| ||||||| || |||||| |||||||||||    
T  33549166 acctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaagtgggtttt 33549102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 3779401 - 3779339
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||| |||||||||||||||  ||  ||||| ||||||||||| |||||||||||||||    
T  3779401 accttgagaaggagcacactcccaagtctcaagccaataccactaggtcaacctaagtgggtt 3779339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 34877095 - 34877149
Alignment:
Q  9 gaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||| |  ||||||||||| ||||||||||||||||||| |||||||||    
T  34877095 gaggagcacattttcagatcctaagtctataccactaggccaacccaagtgggtt 34877149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 6758436 - 6758497
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggt 62  Q
    |||| |||| |||||||||||||| |||||||||| ||||||| ||||||||  ||||||||    
T  6758436 acctcgaggtggagcacactcccaaatcctaagccaataccaccaggccaacacaagtgggt 6758497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 6776626 - 6776679
Alignment:
Q  6 gaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtg 59  Q
    |||||||||||||| ||||||||| ||||| ||||||| ||||||||| |||||    
T  6776626 gaggaggagcacacccccagatcccaagccaataccaccaggccaacccaagtg 6776679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 12234531 - 12234584
Alignment:
Q  11 ggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    ||||||||||||||| ||| ||| | ||||||| ||||||||||||||||||||    
T  12234531 ggagcacactcccaggtcccaagtcaataccaccaggccaacctaagtgggttt 12234584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 10338188 - 10338251
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    |||||||||||||||||||||| || ||| ||||| ||||||| | ||||||| ||||| ||||    
T  10338188 accttgaggaggagcacactcctaggtcccaagccaataccaccatgccaacccaagtgagttt 10338251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 20213100 - 20213057
Alignment:
Q  4 ttgaggaggagcacactcccagatcctaagcctataccactagg 47  Q
    |||||||||||||||||||||| ||| |||| ||||||||||||    
T  20213100 ttgaggaggagcacactcccaggtcccaagcgtataccactagg 20213057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 22107123 - 22107080
Alignment:
Q  4 ttgaggaggagcacactcccagatcctaagcctataccactagg 47  Q
    |||||||||||||||||||||| ||| |||| ||||||||||||    
T  22107123 ttgaggaggagcacactcccaggtcccaagcgtataccactagg 22107080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 28363999 - 28363948
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaac 52  Q
    ||||||||||||||||||||| ||||||| || || ||||||||| ||||||    
T  28363999 accttgaggaggagcacactcgcagatcccaaaccaataccactatgccaac 28363948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 31623005 - 31623068
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    |||| |||||||||||||||||||| ||| ||||| |||||||  | |||||| ||||||||||    
T  31623005 acctcgaggaggagcacactcccaggtcccaagccaataccaccggaccaacccaagtgggttt 31623068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 15951316 - 15951378
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||||||||||||||||| |||  |||| |||||||| ||| ||||| || ||||||    
T  15951316 accttgaggaggagcacactcccaaatctcaagcttataccacaaggacaacccaactgggtt 15951378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 24641204 - 24641266
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||| |||||||||||||||||||||||| ||| | ||||||| | ||||||| || ||||||    
T  24641204 acctcgaggaggagcacactcccagatcccaagtcaataccaccaagccaacccaaatgggtt 24641266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 30127454 - 30127400
Alignment:
Q  9 gaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||||||||||| || ||||| ||||||| || |||||| |||||||||    
T  30127454 gaggagcacactcccagaccccaagccaataccaccagaccaacccaagtgggtt 30127400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 32613156 - 32613214
Alignment:
Q  3 cttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtggg 61  Q
    |||||| ||||||||||||||||| || ||| | ||||||| ||||||||| |||||||    
T  32613156 cttgagaaggagcacactcccagaccccaagtcaataccaccaggccaacccaagtggg 32613214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 21418527 - 21418470
Alignment:
Q  6 gaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||||||||||||  ||| ||||| ||||||| ||||||||| || ||||||    
T  21418527 gaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaactgggtt 21418470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 24507550 - 24507602
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacc 53  Q
    |||||||||||||||| ||||| || ||| ||||| | |||||||||||||||    
T  24507550 accttgaggaggagcaaactccaaggtcccaagccaacaccactaggccaacc 24507602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 34293833 - 34293889
Alignment:
Q  4 ttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgg 60  Q
    ||||||||||||||||||||| || | || || ||||||||||| ||||| ||||||    
T  34293833 ttgaggaggagcacactcccaaattccaaaccaataccactaggtcaacccaagtgg 34293889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 34041602 - 34041665
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    ||||||||||||||||||||| ||||||||||| | ||||||||||||||||| ||||||||||    
T  34041602 accttgaggaggagcacactctcagatcctaagtcaataccactaggccaacccaagtgggttt 34041665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 16381668 - 16381730
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||||||| |||||| ||||||| ||||||||||||||||||||||| |||||||||    
T  16381668 accttgaggaggagaacactctcagatcccaagcctataccactaggccaacccaagtgggtt 16381730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 42327409 - 42327471
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||||||||||||| |||||||||    
T  42327409 accttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 42327471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16918592 - 16918653
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggt 62  Q
    ||||||||||||||||||||||||||||| || || ||||||||||||||||| ||||||||    
T  16918592 accttgaggaggagcacactcccagatcccaaaccaataccactaggccaacccaagtgggt 16918653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 29503333 - 29503270
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    ||||||||||||||||||||||||| ||| || || ||||||||||||||||| ||||||||||    
T  29503333 accttgaggaggagcacactcccaggtcccaaaccaataccactaggccaacccaagtgggttt 29503270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 42602616 - 42602553
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    |||||||| |||||||||||||||| ||| ||||| ||||||||||||||||| ||||||||||    
T  42602616 accttgagaaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttt 42602553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 14500339 - 14500275
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtttt 65  Q
    |||| |||||||||||||||||||||||  |||| |||||||||||||||| | |||||||||||    
T  14500339 acctagaggaggagcacactcccagatctcaagcttataccactaggccaaaccaagtgggtttt 14500275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 11251149 - 11251086
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    |||||||||||||||||||| |||  ||| ||||| ||||||||| ||||||||||||||||||    
T  11251149 accttgaggaggagcacacttccaagtcccaagccaataccactaagccaacctaagtgggttt 11251086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 37480137 - 37480074
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    ||||||||||||||||||||| ||| ||| ||||| ||||||| ||||||||| ||||||||||    
T  37480137 accttgaggaggagcacactctcaggtcccaagccaataccaccaggccaacccaagtgggttt 37480074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 42922473 - 42922414
Alignment:
Q  4 ttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||||||||||||||| | | ||||| ||||||||||||||||| |||||||||    
T  42922473 ttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 42922414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 21195690 - 21195756
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttttta 67  Q
    ||||||||||||||||||||||||  | | ||||||||||||||||| ||||| || ||||||||||    
T  21195690 accttgaggaggagcacactcccaagttccaagcctataccactagggcaacccaaatgggttttta 21195756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 23052537 - 23052599
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||||||||| ||||||||||||  ||| ||||| ||||||| |||||||||||||||||||    
T  23052537 accttgaggagaagcacactcccaagtcccaagccaataccaccaggccaacctaagtgggtt 23052599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 12086143 - 12086203
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtggg 61  Q
    |||||||||||||||||||| |||| ||| ||||| ||||||| |||||||| ||||||||    
T  12086143 accttgaggaggagcacacttccaggtcccaagccaataccaccaggccaacttaagtggg 12086203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 1729878 - 1729815
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    |||| |||||||||||||||||||  ||| ||||| |||||||||| |||||| ||||||||||    
T  1729878 acctagaggaggagcacactcccaagtcccaagccaataccactagcccaacccaagtgggttt 1729815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 4438993 - 4439055
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||||||||||||||||||| ||||||| |||   |||||| |||||||||| |||||||||    
T  4438993 accttgaggaggagcacactctcagatcccaagttaataccattaggccaacccaagtgggtt 4439055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 28846748 - 28846691
Alignment:
Q  6 gaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||||||||||||| ||| ||| | ||||||||||  |||||||||||||||    
T  28846748 gaggaggagcacactcccaggtcccaagtcaataccactagatcaacctaagtgggtt 28846691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 7799054 - 7799113
Alignment:
Q  6 gaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtttt 65  Q
    |||||||||||||||||||  ||| ||||| ||||||| ||| ||||| |||||||||||    
T  7799054 gaggaggagcacactcccaagtcccaagccaataccaccaggacaacccaagtgggtttt 7799113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 19322830 - 19322767
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    ||||||| ||||||||||||||||| ||| || || ||||||||||  ||||| ||||||||||    
T  19322830 accttgaagaggagcacactcccaggtcccaaaccaataccactagatcaacccaagtgggttt 19322767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 39715054 - 39714991
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    |||| |||||||||||||||||||| ||| ||| | ||||||| | ||||||| ||||||||||    
T  39715054 acctcgaggaggagcacactcccaggtcccaagtcaataccaccatgccaacccaagtgggttt 39714991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 1435126 - 1435064
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||||||||| |||||||||| | |||| |||||  |||||||| ||||||| |||||||||    
T  1435126 accttgaggagaagcacactcctaaatcccaagccagtaccactatgccaacccaagtgggtt 1435064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 3001435 - 3001377
Alignment:
Q  7 aggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtttt 65  Q
    |||||||||||||||| |||||  ||| | ||||||||||||||||| ||||| |||||    
T  3001435 aggaggagcacactcctagatctcaagtcaataccactaggccaacccaagtgagtttt 3001377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 5147693 - 5147755
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||| ||||||| |||||||||||  ||| | |||||||||| |||||| |||||||||    
T  5147693 accttgagaaggagcatactcccagatctcaagtcaataccactagaccaacccaagtgggtt 5147755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 11062422 - 11062360
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||||||||| ||||||||||||  | | ||||| ||| ||||||||||||| |||||||||    
T  11062422 accttgaggagaagcacactcccaagttccaagccaatatcactaggccaacccaagtgggtt 11062360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 40416404 - 40416466
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||| |||||||||| |||||||| | | ||| | ||||||||||||||||| |||||||||    
T  40416404 accttaaggaggagcatactcccaggttccaagtcaataccactaggccaacccaagtgggtt 40416466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 7e-18; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 37109365 - 37109427
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||||||||||||| |||||||||    
T  37109365 accttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 37109427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 4249239 - 4249177
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||||||||||||||| | |||| ||||||||||||||||||||| | |||||||||    
T  4249239 accttgaggaggagcacactccaaaatcccaagcctataccactaggccaagcgaagtgggtt 4249177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 31826671 - 31826609
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||||||||||||||||||| || |||| ||||||||||||||||| ||||| |||||||||    
T  31826671 accttgaggaggagcacactcgcaaatcccaagcctataccactagggcaacccaagtgggtt 31826609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 51250538 - 51250599
Alignment:
Q  3 cttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    ||||||| ||||||||||||||||||| ||||| ||||||| ||||||||| ||||||||||    
T  51250538 cttgaggcggagcacactcccagatcccaagccaataccaccaggccaacccaagtgggttt 51250599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 38869830 - 38869783
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggc 48  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  38869830 accttgaggaggagcacactcccagatcccaagccaataccactaggc 38869783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 8030218 - 8030280
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||| ||| | |||||||||    
T  8030218 accttgaggaggagcacactcccaagtcccaagcctataccactagggcaatccaagtgggtt 8030280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 27965537 - 27965587
Alignment:
Q  14 gcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    |||||||||||||||| ||||| ||||||||||||||||| ||||||||||    
T  27965537 gcacactcccagatcccaagccaataccactaggccaacccaagtgggttt 27965587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 2606493 - 2606436
Alignment:
Q  6 gaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||||||||| |||| |||||||||| || ||||||||||||||| |||||||||||    
T  2606493 gaggaggagcatactcacagatcctaaaccaataccactaggccaatctaagtgggtt 2606436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 37720228 - 37720292
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtttt 65  Q
    |||||||||||| |||||||||||| ||| ||||| ||| ||| ||||||||| |||||||||||    
T  37720228 accttgaggaggggcacactcccaggtcccaagccaataacaccaggccaacccaagtgggtttt 37720292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 46545771 - 46545711
Alignment:
Q  3 cttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||||||||||||||||| ||| ||  ||||| ||||||||||||||||| |||||||||    
T  46545771 cttgaggaggagcacactctcaggtctcaagccaataccactaggccaacccaagtgggtt 46545711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 7949468 - 7949531
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    |||||||||||||||||||||| || ||| ||||| ||||| |||||||| || ||||||||||    
T  7949468 accttgaggaggagcacactccgaggtcccaagccaataccgctaggccagcccaagtgggttt 7949531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 37274473 - 37274536
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagccta-taccactaggccaacctaagtgggtt 63  Q
    ||||||||||||||||||||||||| ||| ||||| | ||| |||||||||||| |||||||||    
T  37274473 accttgaggaggagcacactcccaggtcccaagccaattacgactaggccaacccaagtgggtt 37274536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 9241039 - 9241101
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||| ||| ||||||||||| |||||||| ||||| ||||||| ||||||||| |||||||||    
T  9241039 acctcgagcaggagcacactaccagatcccaagccaataccaccaggccaacccaagtgggtt 9241101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 19238591 - 19238653
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||| |||||||||||||||||||  ||| ||||| ||||||| ||||||||| |||||||||    
T  19238591 acctcgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaagtgggtt 19238653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 31759672 - 31759734
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||||||||||||||||||||||  ||| ||||| ||||||||||  ||||| |||||||||    
T  31759672 accttgaggaggagcacactcccaagtcccaagccaataccactagatcaacccaagtgggtt 31759734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 37443756 - 37443702
Alignment:
Q  9 gaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||| |||||||||||||| ||||| ||||||||||| ||||| |||||||||    
T  37443756 gaggagtacactcccagatcccaagccaataccactaggtcaacccaagtgggtt 37443702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 7292815 - 7292871
Alignment:
Q  4 ttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgg 60  Q
    |||||||||||||||||||||| | | ||||| |||||||||| |||||| ||||||    
T  7292815 ttgaggaggagcacactcccaggttccaagccaataccactagaccaacccaagtgg 7292871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 49576908 - 49576960
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacc 53  Q
    ||||||||||||||||||||||||  ||| ||||| ||||||| |||||||||    
T  49576908 accttgaggaggagcacactcccaagtccaaagccaataccaccaggccaacc 49576960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 1730506 - 1730565
Alignment:
Q  4 ttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||| ||||||||||||| ||| ||| ||||| ||||||||||| ||||| |||||||||    
T  1730506 ttgaagaggagcacactctcaggtcccaagccaataccactaggtcaacccaagtgggtt 1730565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 19680802 - 19680865
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    |||||||||| |||||||||||||  ||| ||||  ||||||||||||||| | ||||||||||    
T  19680802 accttgaggaagagcacactcccaagtcccaagcgaataccactaggccaatccaagtgggttt 19680865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 15180795 - 15180741
Alignment:
Q  9 gaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||| |||||||||| ||| ||||| |||||||||| |||| |||||||||||    
T  15180795 gaggagtacactcccaggtcccaagccaataccactagaccaatctaagtgggtt 15180741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 29312272 - 29312318
Alignment:
Q  7 aggaggagcacactcccagatcctaagcctataccactaggccaacc 53  Q
    |||||||| ||||||||| |||| ||||| |||||||||||||||||    
T  29312272 aggaggagaacactcccacatcccaagccaataccactaggccaacc 29312318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 39509132 - 39509070
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||| |||||||||||||||||||||||| |||||  |||||  || |||||| |||||||||    
T  39509132 acctcgaggaggagcacactcccagatcccaagccattaccatgagaccaacccaagtgggtt 39509070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 2622414 - 2622475
Alignment:
Q  6 gaggaggagcacactcccagatcctaagcc----tataccactaggccaacctaagtgggtt 63  Q
    |||||||||||||||||||| ||| |||||     ||||||||||||||||| |||||||||    
T  2622414 gaggaggagcacactcccaggtcccaagccaattaataccactaggccaacccaagtgggtt 2622475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 5450155 - 5450097
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcc---tataccactaggccaacctaa 56  Q
    ||||||||||||||||||||||||||| | |||||    |||||||||| |||||||||    
T  5450155 accttgaggaggagcacactcccagattccaagccaataataccactagtccaacctaa 5450097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 12798746 - 12798682
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtttt 65  Q
    |||| |||||| ||||||||||||||||  || || |||||||| || ||||| |||||||||||    
T  12798746 acctcgaggagcagcacactcccagatctcaaaccaataccactcggtcaacccaagtgggtttt 12798682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 23378018 - 23377974
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccacta 45  Q
    ||||||||||||||||||||||||| ||| ||||| ||| |||||    
T  23378018 accttgaggaggagcacactcccaggtcccaagccaataacacta 23377974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 28635752 - 28635696
Alignment:
Q  7 aggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||||||||||||||||||||| ||| |  |||||| ||| ||||| |||||||||    
T  28635752 aggaggagcacactcccagatcccaagtcagtaccaccaggacaacccaagtgggtt 28635696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 29195149 - 29195093
Alignment:
Q  9 gaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtttt 65  Q
    |||||||||||||| || ||| ||||| | ||||| ||||||||| |||||||||||    
T  29195149 gaggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggtttt 29195093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 33619262 - 33619206
Alignment:
Q  7 aggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||||| ||| ||||||||||||||||| ||||||| | | ||||| |||||||||    
T  33619262 aggaggaccacgctcccagatcctaagccaataccaccaaggcaacccaagtgggtt 33619206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 7e-18; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 2799924 - 2799862
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||| | |||||||||    
T  2799924 accttgaggaggagcacactcccagatctcaagcctataccactaggccaagcgaagtgggtt 2799862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 33700787 - 33700847
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtggg 61  Q
    ||||||||||||||||||||||||||| | ||||| ||||||||||||||||| |||||||    
T  33700787 accttgaggaggagcacactcccagattccaagccaataccactaggccaacccaagtggg 33700847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 8177196 - 8177247
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaac 52  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  8177196 accttgaggaggagcacactcccagatcccaagccaataccactaggccaac 8177247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 9165212 - 9165271
Alignment:
Q  4 ttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||||||||||||||| ||| ||||| ||||||||||||||||| |||||||||    
T  9165212 ttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 9165271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 36371532 - 36371469
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    ||||||||||||||||||||||||| | | ||||| ||||||||||||||||| ||||||||||    
T  36371532 accttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 36371469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 25297834 - 25297768
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttttta 67  Q
    |||| |||||||||||||||| ||||||||||| | |||||||||| |||||| |||||||||||||    
T  25297834 acctcgaggaggagcacactctcagatcctaagtcaataccactagaccaacccaagtgggttttta 25297768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 31794278 - 31794340
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||||||||||||||||||||||  ||| ||||| ||||||||||||||||| |||||||||    
T  31794278 accttgaggaggagcacactcccaagtcccaagccaataccactaggccaacccaagtgggtt 31794340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 6650654 - 6650594
Alignment:
Q  4 ttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    ||||||||||||| |||||| ||||| ||||| |||||||||||||||||||| |||||||    
T  6650654 ttgaggaggagcatactccccgatcccaagccaataccactaggccaacctaattgggttt 6650594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 41508893 - 41508829
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtttt 65  Q
    ||||||||||||||||||||||||||||| || ||  |||||| ||||||||| |||||||||||    
T  41508893 accttgaggaggagcacactcccagatcccaaaccagtaccaccaggccaacccaagtgggtttt 41508829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 6122856 - 6122793
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||| ||||| || |||||||    
T  6122856 accttgaggaggagcacactcccaagtcccaagcctataccactagggcaacccaaatgggttt 6122793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 15786334 - 15786393
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgg 60  Q
    ||||||||||||||||||||||||||||| ||||| |||| ||||| |||||| ||||||    
T  15786334 accttgaggaggagcacactcccagatcccaagccaatactactagaccaacccaagtgg 15786393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 19528341 - 19528403
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||||||||||||||  |||||| ||||| ||||||| ||||||||| |||||||||    
T  19528341 accttgaggaggagcacactcatagatcccaagccaataccaccaggccaacccaagtgggtt 19528403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 52336794 - 52336839
Alignment:
Q  7 aggaggagcacactcccagatcctaagcctataccactaggccaac 52  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  52336794 aggaggagcacactcccagatcccaagccaataccactaggccaac 52336839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 44046162 - 44046206
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccacta 45  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||    
T  44046162 accttgaggaggagcacactcccagatcccaagccaataccacta 44046206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 4566606 - 4566547
Alignment:
Q  5 tgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    ||||||||||||||||||||| | | ||||| ||| ||||||||||||| ||||||||||    
T  4566606 tgaggaggagcacactcccaggttccaagccaatatcactaggccaacccaagtgggttt 4566547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 8904476 - 8904413
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    ||||||||||||||||||||| || |||| ||| | |||| |||||||||||| ||||||||||    
T  8904476 accttgaggaggagcacactcacatatcccaagtcaatactactaggccaacccaagtgggttt 8904413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 24730446 - 24730387
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgg 60  Q
    ||||||| ||||||||||||||||||||  ||| | ||||||||||||||||| ||||||    
T  24730446 accttgaagaggagcacactcccagatctcaagacaataccactaggccaacccaagtgg 24730387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 30420369 - 30420310
Alignment:
Q  4 ttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||||||||||||||||| | |||| ||||| | |||||| ||||||||||||||||||    
T  30420369 ttgaggaggagcacactcctatatcccaagccaaaaccacttggccaacctaagtgggtt 30420310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 40257461 - 40257398
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    |||| |||||||||||||||||||| ||  ||||| ||||||| ||||||||| ||||||||||    
T  40257461 acctcgaggaggagcacactcccaggtctcaagccaataccaccaggccaacccaagtgggttt 40257398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 51703838 - 51703779
Alignment:
Q  4 ttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||||||||||||||||| | ||||| |||||||||| |||||| || ||||||    
T  51703838 ttgaggaggagcacactcccagattccaagccaataccactagaccaacccaaatgggtt 51703779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 26232409 - 26232465
Alignment:
Q  10 aggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttttt 66  Q
    |||||||||||||||||||  ||||| |||||||||| |||||| |||||| |||||    
T  26232409 aggagcacactcccagatctcaagccaataccactagaccaacccaagtggattttt 26232465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 30689068 - 30689012
Alignment:
Q  7 aggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||| |||||||| ||||||||| ||||||  ||| |||||||||||||||    
T  30689068 aggaggagcaaactcccaggtcctaagccaataccatcagggcaacctaagtgggtt 30689012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 51814556 - 51814492
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtttt 65  Q
    ||||||||||||||||||||| ||||||  ||| | ||||||  ||||||||| |||||||||||    
T  51814556 accttgaggaggagcacactctcagatctcaagtcaataccatcaggccaacccaagtgggtttt 51814492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 17410288 - 17410241
Alignment:
Q  6 gaggaggagcacactcccagatcctaagcctataccactaggccaacc 53  Q
    |||||||| ||||||||||||||| || || |||||||||||||||||    
T  17410288 gaggaggaccacactcccagatcccaaaccaataccactaggccaacc 17410241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 21547494 - 21547557
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    |||| |||||||||||| ||||||  ||| ||||| ||||||||||||||||| |||| |||||    
T  21547494 acctcgaggaggagcaccctcccatgtcccaagccaataccactaggccaacccaagtcggttt 21547557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 50901644 - 50901581
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctat-accactaggccaacctaagtgggtt 63  Q
    |||| ||||||||||||||| |||| ||| ||||| || ||||||||||||||| |||||||||    
T  50901644 acctcgaggaggagcacactaccaggtcccaagccaattaccactaggccaacccaagtgggtt 50901581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 52116798 - 52116857
Alignment:
Q  4 ttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||||||||||||||  ||| ||||| ||||||| ||||||||| || ||||||    
T  52116798 ttgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaactgggtt 52116857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 10526885 - 10526823
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||||||||| |||||||| ||| ||||| |||||||| | |||||| || ||||||    
T  10526885 accttgaggaggagcaaactcccaggtcccaagccaataccactggaccaacccaaatgggtt 10526823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 15904670 - 15904612
Alignment:
Q  4 ttgaggaggagcacactcccagatcctaagcctat-accactaggccaacctaagtggg 61  Q
    ||||||||||| | |||||||| ||||||||| || |||||||| ||||||||||||||    
T  15904670 ttgaggaggaggatactcccaggtcctaagccaattaccactagaccaacctaagtggg 15904612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 16169992 - 16170054
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||||||||||| ||||||||||| ||| ||| | ||||||| |||| |||| |||||||||    
T  16169992 accttgaggaggaacacactcccaggtcccaagtcaataccaccaggctaacccaagtgggtt 16170054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 17745270 - 17745328
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtg 59  Q
    |||| |||||||||||||| | ||| ||| ||||| ||||||||||||||||| |||||    
T  17745270 acctcgaggaggagcacacgctcaggtcccaagccaataccactaggccaacccaagtg 17745328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 39012342 - 39012289
Alignment:
Q  12 gagcacactcccagatcctaagcctataccactaggccaacctaagtgggtttt 65  Q
    ||||||||||| || ||| ||||| | ||||||||||||||| |||||||||||    
T  39012342 gagcacactccaaggtcccaagccaacaccactaggccaaccaaagtgggtttt 39012289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 17439979 - 17439947
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaag 33  Q
    |||| ||||||||||||||||||||||||||||    
T  17439979 acctcgaggaggagcacactcccagatcctaag 17439947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 31049669 - 31049608
Alignment:
Q  7 aggaggagcacactcccagatcctaagcctatacca----ctaggccaacctaagtgggttt 64  Q
    |||||||||||||||| |||||| ||||| ||| ||    ||||||||||||||||||||||    
T  31049669 aggaggagcacactcctagatcccaagccaatatcaatagctaggccaacctaagtgggttt 31049608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 2203554 - 2203494
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtggg 61  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||||||||||||| |||||||    
T  2203554 accttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 2203494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 6569791 - 6569847
Alignment:
Q  7 aggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||    
T  6569791 aggaggagcacactcccagatcccaagccaatatcactaggccaacctaagtgggtt 6569847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 16852402 - 16852339
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    |||| |||||||||||||||||||| ||| ||||| ||||||||||||||||| ||||||||||    
T  16852402 acctcgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttt 16852339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 19703501 - 19703564
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    ||||||||||||||||||||| ||| ||| ||||| ||||||||||||||||| ||||||||||    
T  19703501 accttgaggaggagcacactctcaggtcccaagccaataccactaggccaacccaagtgggttt 19703564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 3624642 - 3624582
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtggg 61  Q
    ||||||| ||||||||||||||||| ||| ||||| ||||||||||||||||| |||||||    
T  3624642 accttgaagaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 3624582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 44780128 - 44780191
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    ||||||||||||||||||||||||  ||| ||||| || |||||||||||||| ||||||||||    
T  44780128 accttgaggaggagcacactcccaagtcccaagccaatgccactaggccaacccaagtgggttt 44780191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 11819838 - 11819776
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||| ||||| || ||||||    
T  11819838 accttgaggaggagcacactcccaagtcccaagcctataccactagggcaacccaaatgggtt 11819776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 18540360 - 18540298
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||||||||| || |||||||||| ||| ||||| ||||||||||||||||| |||||||||    
T  18540360 accttgaggagaagtacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 18540298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 30483902 - 30483960
Alignment:
Q  5 tgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||||||||||||| |||| ||||| |||||||| |||||||| |||||||||    
T  30483902 tgaggaggagcacactcccatatcccaagccaataccactgggccaacccaagtgggtt 30483960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 7286261 - 7286209
Alignment:
Q  9 gaggagcacactcccagatcctaagcctataccactaggccaacctaagtggg 61  Q
    ||||||||||||||||||||| || || ||||||||||| |||||||||||||    
T  7286261 gaggagcacactcccagatcccaaaccaataccactaggtcaacctaagtggg 7286209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 12988490 - 12988426
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtttt 65  Q
    |||||||||||||||||||| |||| | | ||||| ||||||||||||||| | |||||||||||    
T  12988490 accttgaggaggagcacacttccaggttccaagccaataccactaggccaatccaagtgggtttt 12988426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 5264606 - 5264543
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    |||| ||||||||||||| |||||| | | ||||| ||||||||||||||||| ||||||||||    
T  5264606 acctcgaggaggagcacattcccaggttccaagccaataccactaggccaacccaagtgggttt 5264543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 20994479 - 20994534
Alignment:
Q  8 ggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||||||||||| ||| ||| | ||||||||||||||||| |||||||||    
T  20994479 ggaggagcacactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 20994534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 28783122 - 28783059
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    ||||||||||||||||||||||||| ||  ||||| ||||||| | ||||||| ||||||||||    
T  28783122 accttgaggaggagcacactcccaggtctcaagccaataccaccaagccaacccaagtgggttt 28783059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 35690078 - 35690129
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaac 52  Q
    |||||||||||||||| || ||||||||| ||||| ||||||||||||||||    
T  35690078 accttgaggaggagcaaacacccagatcccaagccaataccactaggccaac 35690129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 968424 - 968362
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||| |||||||||||||||||||| ||| ||||| ||||||| ||||||||  |||||||||    
T  968424 acctcgaggaggagcacactcccaggtcccaagccaataccaccaggccaactcaagtgggtt 968362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 23361663 - 23361725
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||||||||||||||||| |||| ||| | ||||||| ||| ||||| |||||||||    
T  23361663 accttgaggaggagcacactcccatatcccaagtcaataccaccaggtcaacccaagtgggtt 23361725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 26688927 - 26688865
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||||||||||||||| || ||| ||||| | ||||| ||||||||| |||||||||    
T  26688927 accttgaggaggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggtt 26688865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 27750792 - 27750730
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| ||| ||||| || ||||||    
T  27750792 accttgaggaggagcacactcccaagtcccaagcctataccacgagggcaacccaaatgggtt 27750730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 18897228 - 18897160
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtttttagg 69  Q
    |||||||||||||||||||||  || ||| || || | ||||||||||||||| |||||||||| ||||    
T  18897228 accttgaggaggagcacactctaaggtcccaaaccaacaccactaggccaacccaagtgggtttatagg 18897160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 28898506 - 28898565
Alignment:
Q  4 ttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||||||| |||||||| ||||| | ||||| ||| ||||||| |||||||||||||||    
T  28898506 ttgaggaggggcacactctcagattccaagccaatatcactaggtcaacctaagtgggtt 28898565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 29915934 - 29915989
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaa 56  Q
    |||||||||||||||  |||||||||||| ||  |||||| |||||||||||||||    
T  29915934 accttgaggaggagcgtactcccagatcccaaatctatacaactaggccaacctaa 29915989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 43594332 - 43594383
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaac 52  Q
    ||||||||||||| |||| ||| |||||||||||| ||| ||||||||||||    
T  43594332 accttgaggaggaacacattcctagatcctaagccaatatcactaggccaac 43594383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 11518891 - 11518953
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||||| | |||||||||  | | |||||||||||||||||| |||| |||||||||    
T  11518891 accttgaggaggggtacactcccaagttccaagcctataccactaggctaacccaagtgggtt 11518953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 23874396 - 23874458
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||| ||||||| ||| | |||||| ||| ||||| ||||||||||||||||| |||||||||    
T  23874396 acctcgaggaggcgcagattcccaggtcccaagccaataccactaggccaacccaagtgggtt 23874458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 35641920 - 35641978
Alignment:
Q  6 gaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    ||||||||||||||||||| |||  ||||| ||||||| || |||||| ||||||||||    
T  35641920 gaggaggagcacactcccaaatctcaagccgataccaccagaccaacccaagtgggttt 35641978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 6536582 - 6536514
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagccta------taccactaggccaacctaagtgggtt 63  Q
    |||||||||||||||||||||| || ||| ||||| |      ||||||||||||||||||||||||||    
T  6536582 accttgaggaggagcacactcctaggtcccaagccaataccactaccactaggccaacctaagtgggtt 6536514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 29858063 - 29858124
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggt 62  Q
    |||| |||||||||||||||||| | ||| ||||| ||||||| ||||||| | ||||||||    
T  29858063 acctcgaggaggagcacactccctggtcccaagccaataccaccaggccaatccaagtgggt 29858124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 3826798 - 3826854
Alignment:
Q  8 ggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    |||||||||||||| || ||   ||||| ||||||||||||||||| ||||||||||    
T  3826798 ggaggagcacactctcaaatggcaagccaataccactaggccaacccaagtgggttt 3826854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 29431067 - 29431011
Alignment:
Q  7 aggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||||||||||||||||  ||| ||||| ||||| | ||||||||| |||||||||    
T  29431067 aggaggagcacactcccaagtcccaagccaataccgccaggccaacccaagtgggtt 29431011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 5e-16; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 87437 - 87500
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    ||||||||||||||||||||||||||| | ||| | ||||||||||||||||| ||||||||||    
T  87437 accttgaggaggagcacactcccagattccaaggcaataccactaggccaaccgaagtgggttt 87500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 30883212 - 30883275
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    ||||||||||||||||||||||||| ||| ||||| |||||||||| |||||| ||||||||||    
T  30883212 accttgaggaggagcacactcccaggtcccaagccaataccactagaccaacccaagtgggttt 30883275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 16457872 - 16457810
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||||||||||||||| || ||| ||||| ||||||| |||||||||||||||||||    
T  16457872 accttgaggaggagcacactccaaggtcccaagccaataccaccaggccaacctaagtgggtt 16457810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 29075838 - 29075781
Alignment:
Q  6 gaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||||||||||||||||| ||||| |||||||||||| |||| |||||||||    
T  29075838 gaggaggagcacactcccagatcccaagccaataccactaggcaaacccaagtgggtt 29075781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 21549157 - 21549213
Alignment:
Q  7 aggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||||||||||||||||| ||| ||||| ||||||||||||||||| |||||||||    
T  21549157 aggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 21549213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 34984868 - 34984805
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    ||||||||||||||||||||||||| | | ||||| |||||||||| |||||| ||||||||||    
T  34984868 accttgaggaggagcacactcccaggttccaagccaataccactagaccaacccaagtgggttt 34984805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 25627119 - 25627057
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||||||||||||||||||||||  | | ||||| ||||||||||||||||| |||||||||    
T  25627119 accttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgggtt 25627057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 14285223 - 14285160
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    ||||||||||||||||||||||||| | | ||||| || ||||| |||||||| ||||||||||    
T  14285223 accttgaggaggagcacactcccaggttccaagccaattccactcggccaacccaagtgggttt 14285160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 16436679 - 16436617
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    |||||||||||||||||||||| || ||| ||||| ||||||||||||||||| ||||| ||||    
T  16436679 accttgaggaggagcacactccaag-tcccaagccaataccactaggccaacccaagtgagttt 16436617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 26598578 - 26598523
Alignment:
Q  9 gaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    ||||||||||||| ||||||| ||||| ||||||||||||||| | ||||||||||    
T  26598578 gaggagcacactctcagatcccaagccaataccactaggccaatccaagtgggttt 26598523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 7918483 - 7918545
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||||||||||||  ||||||||| | | ||||| ||||||||||||||||| |||||||||    
T  7918483 accttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgggtt 7918545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 22020882 - 22020940
Alignment:
Q  7 aggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtttt 65  Q
    ||||||||||||||||||||||| ||||  ||||||||| ||||||| ||| |||||||    
T  22020882 aggaggagcacactcccagatcccaagctaataccactatgccaacccaagagggtttt 22020940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 29692403 - 29692463
Alignment:
Q  4 ttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    |||||||||||||||||||||||||| || || ||||||| || |||||| || |||||||    
T  29692403 ttgaggaggagcacactcccagatcccaatccaataccaccagaccaacccaaatgggttt 29692463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 43230794 - 43230852
Alignment:
Q  7 aggaggagcacactcccagatcctaagcc--tataccactaggccaacctaagtgggtt 63  Q
    ||||||||||||||| |||| || |||||  |||||||||||||||||| |||||||||    
T  43230794 aggaggagcacactctcagaacccaagccaatataccactaggccaacccaagtgggtt 43230852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 43442258 - 43442207
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaac 52  Q
    ||||||||||||||||||||||||||||  || || ||||||||| ||||||    
T  43442258 accttgaggaggagcacactcccagatctcaaaccaataccactatgccaac 43442207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 84886 - 84852
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcc 35  Q
    ||||||||||||||||||||||||||||| |||||    
T  84886 accttgaggaggagcacactcccagatcccaagcc 84852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 892488 - 892550
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||||||| ||||||  || ||| ||||| ||||||||||||||||| || ||||||    
T  892488 accttgaggaggagtacactctgaggtcccaagccaataccactaggccaacccaaatgggtt 892550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 14495819 - 14495881
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||| |||||||||||||||||||||||| ||| | ||||||| || |||||| || ||||||    
T  14495819 acctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaaatgggtt 14495881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 17028278 - 17028340
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||||||||||||||||||||||  ||| || || |||| |||||| ||||| |||||||||    
T  17028278 accttgaggaggagcacactcccaagtcccaacccaatacaactaggtcaacccaagtgggtt 17028340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 30109328 - 30109385
Alignment:
Q  7 aggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    ||||||||||||||||||| ||  ||||| ||||||| | ||||||| ||||||||||    
T  30109328 aggaggagcacactcccaggtcacaagccaataccaccaagccaacccaagtgggttt 30109385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 37258380 - 37258429
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggcca 50  Q
    |||||||||||||||||||||| |||||| ||||  ||||||||| ||||    
T  37258380 accttgaggaggagcacactcctagatcccaagctaataccactaagcca 37258429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 18437144 - 18437088
Alignment:
Q  4 ttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgg 60  Q
    |||||||||||||||||| ||  ||| |||   ||||||||||||||||||||||||    
T  18437144 ttgaggaggagcacactctcaagtcccaagttaataccactaggccaacctaagtgg 18437088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 22737137 - 22737081
Alignment:
Q  8 ggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    ||||||||||||| |||  ||| ||||| |||||||||| |||||| ||||||||||    
T  22737137 ggaggagcacacttccaagtcccaagccaataccactagaccaacccaagtgggttt 22737081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 42756829 - 42756785
Alignment:
Q  12 gagcacactcccagatcctaagcctataccactaggccaacctaa 56  Q
    ||||||||| |||||||||||||| |||||||||  |||||||||    
T  42756829 gagcacacttccagatcctaagccaataccactaaaccaacctaa 42756785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 32783 - 32846
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    ||||||||||||||| ||| |||||||||| |||| ||||||| ||||||||| ||||||||||    
T  32783 accttgaggaggagcgcacccccagatcctcagccaataccaccaggccaacccaagtgggttt 32846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 15791 - 15854
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    |||||||||||||||| ||||| | |||| ||||| ||||||| |||||||| |||||||||||    
T  15791 accttgaggaggagcatactccaaaatcccaagccaataccaccaggccaacttaagtgggttt 15854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 94985 - 95044
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgg 60  Q
    ||||||||||||||||||||||||| | | ||||| ||||||||||||||||| ||||||    
T  94985 accttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgg 95044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 15337 - 15399
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||| |||||||||||||||||||| ||| ||||| ||||||| || |||||| |||||||||    
T  15337 acctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaagtgggtt 15399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 13060 - 13118
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtg 59  Q
    ||||||||||||||||||||||||||||  ||||| ||||||| | ||||||| |||||    
T  13060 accttgaggaggagcacactcccagatctcaagccaataccaccaagccaaccgaagtg 13118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 41647 - 41709
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||| ||||||||||| |||| ||||||  ||||| ||||||||||||||||| |||||||||    
T  41647 acctcgaggaggagcatactctcagatctcaagccaataccactaggccaacccaagtgggtt 41709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 47440 - 47382
Alignment:
Q  5 tgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    ||||||||| || |||||||||||||||||| ||||||| |||| |||| |||||||||    
T  47440 tgaggaggaacatactcccagatcctaagccaataccacaaggcaaacccaagtgggtt 47382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 11590 - 11541
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggcca 50  Q
    |||| |||||||||||||||||||||||| ||||| ||||||| ||||||    
T  11590 acctcgaggaggagcacactcccagatcccaagccaataccaccaggcca 11541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 4402 - 4350
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacc 53  Q
    ||||| || ||||||||||||||| |||| ||||||||||||||||| |||||    
T  4402 accttaagaaggagcacactcccaaatcccaagcctataccactagggcaacc 4350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 19976 - 20027
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaac 52  Q
    |||||||||||||||| |||||||| | | ||||| ||||||||||||||||    
T  19976 accttgaggaggagcatactcccaggttccaagccaataccactaggccaac 20027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 6651 - 6710
Alignment:
Q  4 ttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||| ||||||||||  |||||| || ||||||||||  |||||||||||||||    
T  6651 ttgaggaggaacacactcccaagtcctaaaccaataccactagatcaacctaagtgggtt 6710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 91187 - 91124
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggttt 64  Q
    ||||| ||||| |||||||| |||||| | || |||||||||||||| ||||| ||||||||||    
T  91187 accttaaggagaagcacacttccagattcgaaacctataccactaggtcaacccaagtgggttt 91124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 2484 - 2526
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccac 43  Q
    ||||||||||||||||||||||||||||| || || |||||||    
T  2484 accttgaggaggagcacactcccagatccaaaaccaataccac 2526  T

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Target: scaffold0070 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 42538 - 42596
Alignment:
Q  5 tgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||||| |||||||||| | ||| | ||||||||||||||||| || ||||||    
T  42538 tgaggaggagcatactcccagattccaagtcaataccactaggccaacccaactgggtt 42596  T

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Target: scaffold0063 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 35403 - 35465
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacctaagtgggtt 63  Q
    |||||||||||||||| ||||| |||| | ||||| |||||||| ||| |||| |||||||||    
T  35403 accttgaggaggagcatactcctagattccaagccaataccactgggcaaaccgaagtgggtt 35465  T

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Target: scaffold0122 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 6936 - 6985
Alignment:
Q  4 ttgaggaggagcacactcccagatcctaagcctataccactaggccaacc 53  Q
    ||||||||||||||||||||   ||| ||||| |||||||||||||||||    
T  6936 ttgaggaggagcacactccccagtcccaagccaataccactaggccaacc 6985  T

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Target: scaffold1367 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 859 - 903
Alignment:
Q  6 gaggaggagcacactcccagatcctaagcctataccactaggcca 50  Q
    ||||||||||||| |||||||||| ||||| ||||||| ||||||    
T  859 gaggaggagcacattcccagatcccaagccaataccaccaggcca 903  T

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Target: scaffold0337 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 1815 - 1763
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacc 53  Q
    |||||||||||||||| ||||| || ||| ||||| | |||||||||||||||    
T  1815 accttgaggaggagcaaactccaaggtcccaagccaacaccactaggccaacc 1763  T

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Target: scaffold0065 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 12251 - 12199
Alignment:
Q  1 accttgaggaggagcacactcccagatcctaagcctataccactaggccaacc 53  Q
    |||||||||||||||| ||||| || ||| ||||| | |||||||||||||||    
T  12251 accttgaggaggagcaaactccaaggtcccaagccaacaccactaggccaacc 12199  T

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