View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21325_low_7 (Length: 316)
Name: NF21325_low_7
Description: NF21325
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21325_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 18 - 301
Target Start/End: Complemental strand, 37540967 - 37540688
Alignment:
| Q |
18 |
ccctttgcaatttatttgactttcatcagttcatgtaattttataattacttaaaaagtacttgttgttgaacctacatttttagacgaattttaattac |
117 |
Q |
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| T |
37540967 |
ccctttgcaatttatttgactttcatcagttcatgtaattttataatcacttaaaaagtacttgtttttgaacctacatttttagacgaattttaattac |
37540868 |
T |
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| Q |
118 |
tatagttccatccttcgcccctacatacatacatatgacccatgcgtgctatgtttggttacgtttttcagatcccaagtttccaactctgaacacacac |
217 |
Q |
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| T |
37540867 |
tatagttccatccttcgcccctacatacata----tgacccatgcgtgctatgtttggttacgtttttcaaatcccaagtttccaactctgaacacacac |
37540772 |
T |
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| Q |
218 |
caataaaaagagtagtttttctggtctattcaaattcgtaccacaactgaaagttaaacgcagatagaagatgtgcatttcatt |
301 |
Q |
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| T |
37540771 |
caataaaaagagtagtttttctgttctattcaaattcgtgccataactgaaagttaaacgcagatagaagatgtgcatttcatt |
37540688 |
T |
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