View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21326_high_17 (Length: 299)
Name: NF21326_high_17
Description: NF21326
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21326_high_17 |
 |  |
|
| [»] scaffold0169 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr2 (Bit Score: 282; Significance: 1e-158; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 14150447 - 14150740
Alignment:
| Q |
1 |
acatcattgctacctttgttaaaacagtctacaactttctttgcatccatctcaaaatctacatttgtaagttgtagttcctgtacccattgaatagcat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14150447 |
acatcattgctacctttgttaaaacagtctacaactttctttgcatccatctcaaaatctacatttgtaagttgtagttcctgtacccattgaatagcat |
14150546 |
T |
 |
| Q |
101 |
aaaataatcccaacgcttctccaacctccggcgtgcacataggattagaccacatcaccttggcccttaagaagttaccagcaacatcacgtaaacacat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
14150547 |
aaaataatcccaacgcttctccaacctccggcgtgcacataggattagaccacatcaccttggcccttaagaagttaccggcagcatcacgtaaacacat |
14150646 |
T |
 |
| Q |
201 |
accaaatcctacacggttcaatgcttccgaaaatgccgcgtctatattacatttaattctgccttgctgtggtttaacccatctgatctgtgct |
294 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14150647 |
accaaatcctacatggttcaatgcttccgaaaatgccgcgtctatattacatttaattctgccttgctgtggtttaacccatctgatctgtgct |
14150740 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 40492374 - 40492310
Alignment:
| Q |
12 |
acctttgttaaaacagtctacaactttctttgcatccatctcaaaatctacatttgtaagttgta |
76 |
Q |
| |
|
||||||||||||| | |||||||||||||||||||||| ||||||||| |||||||||||||||| |
|
|
| T |
40492374 |
acctttgttaaaataatctacaactttctttgcatccaactcaaaatccacatttgtaagttgta |
40492310 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 13221770 - 13221701
Alignment:
| Q |
11 |
tacctttgttaaaacagtctacaactttctttgcatccatctcaaaatctacatttgtaagttgtagttc |
80 |
Q |
| |
|
||||||||||||| | |||||||| | ||||||||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
13221770 |
tacctttgttaaagtaatctacaacctactttgcatccagctcaaaatccacatttgtaagttgtagttc |
13221701 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 11524252 - 11524310
Alignment:
| Q |
43 |
gcatccatctcaaaatctacatttgtaagttgtagttcctgtacccattgaatagcata |
101 |
Q |
| |
|
||||||||||||||||| ||||| || ||||| || || |||||||| ||||||||||| |
|
|
| T |
11524252 |
gcatccatctcaaaatcgacattagtgagttgcagctcatgtacccactgaatagcata |
11524310 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 246; Significance: 1e-136; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 27804825 - 27805118
Alignment:
| Q |
1 |
acatcattgctacctttgttaaaacagtctacaactttctttgcatccatctcaaaatctacatttgtaagttgtagttcctgtacccattgaatagcat |
100 |
Q |
| |
|
|||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
27804825 |
acatcattactacttttgttaaaaaagtctacaactttctttgcatccatctcaaaatctacatttgtaagttgtagttcttgtacccattgaatagcat |
27804924 |
T |
 |
| Q |
101 |
aaaataatcccaacgcttctccaacctccggcgtgcacataggattagaccacatcaccttggcccttaagaagttaccagcaacatcacgtaaacacat |
200 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| | ||||||||| |
|
|
| T |
27804925 |
aaaataatcccaacgcttccccaacctccggcgtgcacataggattagaccacatcatcttggcccttaagaagttaccagcagcatcccctaaacacat |
27805024 |
T |
 |
| Q |
201 |
accaaatcctacacggttcaatgcttccgaaaatgccgcgtctatattacatttaattctgccttgctgtggtttaacccatctgatctgtgct |
294 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
27805025 |
accaaatcctacacggttcaatgcttctgaaaatgccgcgtctatattacatttcattctgcctcgctgtggtttaacccatctgatctgtgct |
27805118 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 80
Target Start/End: Original strand, 28841680 - 28841730
Alignment:
| Q |
30 |
tacaactttctttgcatccatctcaaaatctacatttgtaagttgtagttc |
80 |
Q |
| |
|
|||||| || |||||||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
28841680 |
tacaaccttttttgcatccaactcaaaatccacatttgtaagttgtagttc |
28841730 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 162; Significance: 2e-86; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 5477460 - 5477753
Alignment:
| Q |
1 |
acatcattgctacctttgttaaaacagtctacaactttctttgcatccatctcaaaatctacatttgtaagttgtagttcctgtacccattgaatagcat |
100 |
Q |
| |
|
|||||||||||||||||||| ||| ||||||||||||||| ||||| |||||||||||||||||||| || ||||||||| ||||||||||||||||||| |
|
|
| T |
5477460 |
acatcattgctacctttgttgaaaaagtctacaactttctctgcattcatctcaaaatctacatttgaaaattgtagttcttgtacccattgaatagcat |
5477559 |
T |
 |
| Q |
101 |
aaaataatcccaacgcttctccaacctccggcgtgcacataggattagaccacatcaccttggcccttaagaagttaccagcaacatcacgtaaacacat |
200 |
Q |
| |
|
|||| ||||||||| |||| |||||||||||||||||||||||||||| |||||||| ||||||||||| ||| | || ||| |||| | ||||||||| |
|
|
| T |
5477560 |
aaaacaatcccaacacttccccaacctccggcgtgcacataggattagtccacatcatcttggcccttatgaaactgccggcagcatcccataaacacat |
5477659 |
T |
 |
| Q |
201 |
accaaatcctacacggttcaatgcttccgaaaatgccgcgtctatattacatttaattctgccttgctgtggtttaacccatctgatctgtgct |
294 |
Q |
| |
|
||||||||| |||||||| | |||||||||||| || | ||||||||| ||||| || |||||||||| ||||||||||||| ||||||||| |
|
|
| T |
5477660 |
accaaatccaacacggtttagtgcttccgaaaacgctgtgtctatattgcatttgtttatgccttgctgcggtttaacccatcgaatctgtgct |
5477753 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 12200480 - 12200666
Alignment:
| Q |
13 |
cctttgttaaaacagtctacaactttctttgcatccatctcaaaatctacatttgtaagttgtagttcctgtacccattgaatagcataaaataatccca |
112 |
Q |
| |
|
|||||| ||||| | ||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| | || || | |
|
|
| T |
12200480 |
cctttggtaaaataatctacaactaacttcgcatccatctcaaaatctacatttgtaagttgtagttcgtgtacccattgaattgcatagagtagaccta |
12200579 |
T |
 |
| Q |
113 |
acgcttctccaacctccggcgtgcacataggattagaccacatcaccttggcccttaagaagttaccagcaacatcacgtaaacaca |
199 |
Q |
| |
|
| |||| |||| ||| ||| | || || |||||||||||||||| ||| ||| | ||| ||||||||| |||| |||| ||||| |
|
|
| T |
12200580 |
atacttccccaatctctggcttacatatgggattagaccacatcatctttgccttcctgaaattaccagcagcatcccgtatacaca |
12200666 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 100
Target Start/End: Complemental strand, 1512202 - 1512133
Alignment:
| Q |
31 |
acaactttctttgcatccatctcaaaatctacatttgtaagttgtagttcctgtacccattgaatagcat |
100 |
Q |
| |
|
||||||||||| ||||||| ||||||||||||||| | |||||||| ||| | |||||||||||||||| |
|
|
| T |
1512202 |
acaactttcttggcatccaactcaaaatctacattcgaaagttgtaattctcgcacccattgaatagcat |
1512133 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 18748502 - 18748428
Alignment:
| Q |
51 |
ctcaaaatctacatttgtaagttgtagttcctgtacccattgaatagcataaaataatcccaacgcttctccaac |
125 |
Q |
| |
|
||||||||| |||||| |||| |||||| || |||||||||||||||||||| | |||||| ||||| ||||| |
|
|
| T |
18748502 |
ctcaaaatcaacattttgaagtcttagttcatgaacccattgaatagcataaaacagtcccaaagcttccccaac |
18748428 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 72; Significance: 9e-33; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 7 - 242
Target Start/End: Original strand, 27039913 - 27040148
Alignment:
| Q |
7 |
ttgctacctttgttaaaacagtctacaactttctttgcatccatctcaaaatctacatttgtaagttgtagttcctgtacccattgaatagcataaaata |
106 |
Q |
| |
|
||||| |||||||||||| | ||||||||| ||| |||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||| | | |
|
|
| T |
27039913 |
ttgctgcctttgttaaaataatctacaactaacttcgcatccatctcaaaatctacatttgtaagttgtagttcgtatacccattgaattgcatagagca |
27040012 |
T |
 |
| Q |
107 |
atcccaacgcttctccaacctccggcgtgcacataggattagaccacatcaccttggcccttaagaagttaccagcaacatcacgtaaacacataccaaa |
206 |
Q |
| |
|
||||| ||||| |||| ||||||| | || || |||||||||||||||| ||| ||| | ||| ||||||||| |||| |||| ||||| ||||| |
|
|
| T |
27040013 |
gacccaatgcttccccaatctccggcctacatatgggattagaccacatcatctttgccttcctgaaattaccagcagcatcccgtatacacaacccaaa |
27040112 |
T |
 |
| Q |
207 |
tcctacacggttcaatgcttccgaaaatgccgcgtc |
242 |
Q |
| |
|
|| ||| | || || |||||||||| |||||||| |
|
|
| T |
27040113 |
accaacatgatttaaatcttccgaaaacgccgcgtc |
27040148 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 7 - 157
Target Start/End: Original strand, 14489455 - 14489605
Alignment:
| Q |
7 |
ttgctacctttgttaaaacagtctacaactttctttgcatccatctcaaaatctacatttgtaagttgtagttcctgtacccattgaatagcataaaata |
106 |
Q |
| |
|
||||| |||||||||||| | ||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| | | |
|
|
| T |
14489455 |
ttgctgcctttgttaaaataatctacaactaacttcgcatccatctcaaaatctacatttgtaagttgtagttcgtgtacccattgaattgcatagagca |
14489554 |
T |
 |
| Q |
107 |
atcccaacgcttctccaacctccggcgtgcacataggattagaccacatca |
157 |
Q |
| |
|
| || || ||||| |||| ||| ||| | || || |||||||||||||||| |
|
|
| T |
14489555 |
aacctaatgcttccccaatctctggcctacatatgggattagaccacatca |
14489605 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 38356599 - 38356540
Alignment:
| Q |
35 |
ctttctttgcatccatctcaaaatctacatttgtaagttgtagttcctgtacccattgaat |
95 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| ||||||||| || |||| ||| ||||| |
|
|
| T |
38356599 |
ctttctttgcatccatctc-aaatctacatttgaaagttgtagctcatgtatccaatgaat |
38356540 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 67; Significance: 9e-30; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 3215001 - 3214923
Alignment:
| Q |
2 |
catcattgctacctttgttaaaacagtctacaactttctttgcatccatctcaaaatctacatttgtaagttgtagttc |
80 |
Q |
| |
|
||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
3215001 |
catcattgctacctttgttaaaaaactctacaactttctttgcatccatctcaaaatctacatttggaagttgtagttc |
3214923 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 46149435 - 46149562
Alignment:
| Q |
3 |
atcattgctacctttgttaaaacagtctacaactttctttgcatccatctcaaaatctacatttgtaagttgtagttcctgtacccattgaatagcataa |
102 |
Q |
| |
|
||||||||||||||| || ||| | |||||||| |||||| |||| | ||||||| | |||||||||||||||||| || ||||||| |||||||| |
|
|
| T |
46149435 |
atcattgctacctttattgaaataatctacaacattctttacatcaaattcaaaattcatatttgtaagttgtagttcatgcacccattagatagcatag |
46149534 |
T |
 |
| Q |
103 |
aataatcccaacgcttctccaacctccg |
130 |
Q |
| |
|
| |||||||||||||| ||||| |||| |
|
|
| T |
46149535 |
gaaaatcccaacgcttcaccaacatccg |
46149562 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 125
Target Start/End: Complemental strand, 12928559 - 12928465
Alignment:
| Q |
31 |
acaactttctttgcatccatctcaaaatctacatttgtaagttgtagttcctgtacccattgaatagcataaaataatcccaacgcttctccaac |
125 |
Q |
| |
|
||||||||||| ||||||| |||||||| |||||||| ||||||||||| |||| |||||| ||||||| | ||||||| ||||||||||| |
|
|
| T |
12928559 |
acaactttcttggcatccaattcaaaatccacatttgttagttgtagttcatgtatccattggatagcatgtgagaatcccatagcttctccaac |
12928465 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 30092120 - 30092192
Alignment:
| Q |
28 |
tctacaactttctttgcatccatctcaaaatctacatttgtaagttgtagttcctgtacccattgaatagcat |
100 |
Q |
| |
|
|||||||| || |||||||| | ||||||||| |||||||||||||||||||| || |||||| | ||||||| |
|
|
| T |
30092120 |
tctacaaccttttttgcatcgaactcaaaatccacatttgtaagttgtagttcatgcacccatcggatagcat |
30092192 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 44; Significance: 5e-16; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 35 - 154
Target Start/End: Original strand, 30273853 - 30273972
Alignment:
| Q |
35 |
ctttctttgcatccatctcaaaatctacatttgtaagttgtagttcctgtacccattgaatagcataaaataatcccaacgcttctccaacctccggcgt |
134 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || ||||||||| || ||||| ||||| |||| | | |||||||||||| |||| |||||| || |
|
|
| T |
30273853 |
ctttctttgcatccatctcaaaatctacatttaaaaattgtagttcatgcacccaatgaattgcatggagcagtcccaacgcttccccaatctccggtgt |
30273952 |
T |
 |
| Q |
135 |
gcacataggattagaccaca |
154 |
Q |
| |
|
|| || ||||||| ||||| |
|
|
| T |
30273953 |
acatatgggattagtccaca |
30273972 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 25938961 - 25938880
Alignment:
| Q |
19 |
ttaaaacagtctacaactttctttgcatccatctcaaaatctacatttgtaagttgtagttcctgtacccattgaatagcat |
100 |
Q |
| |
|
|||||| | |||||||||||||| ||||||| |||||||| |||||||| ||| ||||||| ||||||||||| ||||||| |
|
|
| T |
25938961 |
ttaaaataatctacaactttcttggcatccaattcaaaatccacatttgttagtagtagttcatgtacccattggatagcat |
25938880 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 96
Target Start/End: Complemental strand, 44587564 - 44587499
Alignment:
| Q |
31 |
acaactttctttgcatccatctcaaaatctacatttgtaagttgtagttcctgtacccattgaata |
96 |
Q |
| |
|
||||||||||| || ||||||||||||||||| |||| |||||||| ||| | |||||||||||| |
|
|
| T |
44587564 |
acaactttcttggcgtccatctcaaaatctacgtttgaaagttgtaattctcgcacccattgaata |
44587499 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 13076618 - 13076554
Alignment:
| Q |
13 |
cctttgttaaaacagtctacaactttctttgcatccatctcaaaatctacatttgtaagttgtag |
77 |
Q |
| |
|
||||||||| || | |||||| | |||| |||||||| ||| ||||| ||||||||||||||||| |
|
|
| T |
13076618 |
cctttgttataataatctacatccttctctgcatccaactcgaaatccacatttgtaagttgtag |
13076554 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 38; Significance: 0.000000000002; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 100
Target Start/End: Complemental strand, 19792196 - 19792127
Alignment:
| Q |
31 |
acaactttctttgcatccatctcaaaatctacatttgtaagttgtagttcctgtacccattgaatagcat |
100 |
Q |
| |
|
||||||||||| ||||||| ||| ||||| ||||| | ||||||||||||||| |||||||| ||||||| |
|
|
| T |
19792196 |
acaactttcttggcatccaactcgaaatcaacattaggaagttgtagttcctgcacccattgtatagcat |
19792127 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 100
Target Start/End: Original strand, 1539125 - 1539194
Alignment:
| Q |
31 |
acaactttctttgcatccatctcaaaatctacatttgtaagttgtagttcctgtacccattgaatagcat |
100 |
Q |
| |
|
||||||||||| ||||||| ||||||||||||||| | |||||||| ||| | ||| |||||||||||| |
|
|
| T |
1539125 |
acaactttcttggcatccaactcaaaatctacattcgaaagttgtaattctcgcacctattgaatagcat |
1539194 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 100
Target Start/End: Original strand, 22522731 - 22522800
Alignment:
| Q |
31 |
acaactttctttgcatccatctcaaaatctacatttgtaagttgtagttcctgtacccattgaatagcat |
100 |
Q |
| |
|
||||||||||| || |||| ||||||||||| || | |||||||| |||| | |||||||||||||||| |
|
|
| T |
22522731 |
acaactttcttggcgtccaactcaaaatctatgttcgaaagttgtaattcccgcacccattgaatagcat |
22522800 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 7753794 - 7753742
Alignment:
| Q |
26 |
agtctacaactttctttgcatccatctcaaaatctacatttgtaagttgtagt |
78 |
Q |
| |
|
|||||||||||||||||||||| | |||||||| ||||||| ||||||||| |
|
|
| T |
7753794 |
agtctacaactttctttgcatcgagttcaaaatcaacatttgagagttgtagt |
7753742 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0169 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0169
Description:
Target: scaffold0169; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 100
Target Start/End: Original strand, 22893 - 22962
Alignment:
| Q |
31 |
acaactttctttgcatccatctcaaaatctacatttgtaagttgtagttcctgtacccattgaatagcat |
100 |
Q |
| |
|
||||||||||| ||||||| ||||||||||||||| | |||||||| ||| | |||||||| ||||||| |
|
|
| T |
22893 |
acaactttcttggcatccaactcaaaatctacattcgaaagttgtaattctcgcacccattgcatagcat |
22962 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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