View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21326_high_23 (Length: 274)

Name: NF21326_high_23
Description: NF21326
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21326_high_23
NF21326_high_23
[»] chr6 (66 HSPs)
chr6 (17-257)||(27593078-27593318)
chr6 (1-257)||(27611060-27611316)
chr6 (1-257)||(27724903-27725159)
chr6 (10-257)||(27718437-27718684)
chr6 (1-257)||(27698552-27698808)
chr6 (17-257)||(27678835-27679075)
chr6 (1-245)||(28781012-28781256)
chr6 (1-213)||(28786151-28786363)
chr6 (1-213)||(28792272-28792484)
chr6 (1-257)||(27604763-27605019)
chr6 (5-245)||(26802319-26802559)
chr6 (17-257)||(27677672-27677912)
chr6 (1-257)||(31284161-31284417)
chr6 (1-243)||(27229105-27229347)
chr6 (9-254)||(27531258-27531503)
chr6 (1-252)||(26884036-26884287)
chr6 (1-257)||(26646352-26646608)
chr6 (1-257)||(26752320-26752576)
chr6 (17-257)||(27706460-27706700)
chr6 (17-257)||(26655878-26656118)
chr6 (17-257)||(26761849-26762089)
chr6 (29-257)||(27338123-27338351)
chr6 (29-257)||(27398863-27399091)
chr6 (17-257)||(26823729-26823969)
chr6 (17-257)||(26622865-26623105)
chr6 (17-257)||(26728843-26729083)
chr6 (61-257)||(25579652-25579848)
chr6 (32-256)||(28234468-28234692)
chr6 (1-256)||(26861489-26861744)
chr6 (61-257)||(25481675-25481871)
chr6 (61-257)||(26055859-26056055)
chr6 (61-257)||(26075829-26076025)
chr6 (29-257)||(26142766-26142994)
chr6 (29-257)||(25538441-25538669)
chr6 (29-257)||(26048746-26048974)
chr6 (29-257)||(26069915-26070143)
chr6 (32-257)||(28242708-28242933)
chr6 (46-257)||(28181032-28181243)
chr6 (46-256)||(28185284-28185494)
chr6 (32-257)||(28226854-28227079)
chr6 (32-257)||(28325385-28325610)
chr6 (34-257)||(28098427-28098650)
chr6 (26-256)||(28139439-28139669)
chr6 (144-257)||(26341992-26342105)
chr6 (71-257)||(26848603-26848789)
chr6 (143-257)||(28149953-28150066)
chr6 (106-253)||(26937072-26937219)
chr6 (106-257)||(28297771-28297922)
chr6 (106-257)||(28514151-28514302)
chr6 (58-245)||(29825957-29826144)
chr6 (59-257)||(26635621-26635819)
chr6 (59-257)||(26741587-26741785)
chr6 (132-245)||(25506979-25507092)
chr6 (59-257)||(26974983-26975181)
chr6 (142-257)||(2184302-2184417)
chr6 (60-257)||(26959097-26959295)
chr6 (32-257)||(27665175-27665400)
chr6 (59-257)||(25071590-25071788)
chr6 (105-243)||(26893543-26893681)
chr6 (32-254)||(27214321-27214543)
chr6 (32-254)||(27234685-27234907)
chr6 (1-102)||(27427816-27427917)
chr6 (142-257)||(2184912-2185027)
chr6 (170-257)||(27427664-27427751)
chr6 (136-177)||(28481232-28481273)
chr6 (136-177)||(29793656-29793697)
[»] scaffold0349 (3 HSPs)
scaffold0349 (1-257)||(3479-3736)
scaffold0349 (1-257)||(14414-14669)
scaffold0349 (10-55)||(8061-8106)
[»] scaffold0277 (2 HSPs)
scaffold0277 (1-257)||(4729-4985)
scaffold0277 (1-245)||(13702-13946)
[»] scaffold0419 (1 HSPs)
scaffold0419 (5-245)||(7402-7642)
[»] scaffold1254 (1 HSPs)
scaffold1254 (5-222)||(10-227)
[»] chr4 (10 HSPs)
chr4 (1-257)||(18679612-18679868)
chr4 (1-255)||(18724132-18724386)
chr4 (1-257)||(18699445-18699701)
chr4 (1-255)||(18731551-18731805)
chr4 (1-257)||(18655522-18655778)
chr4 (26-245)||(5091024-5091243)
chr4 (1-102)||(17989250-17989351)
chr4 (1-102)||(18073638-18073739)
chr4 (170-257)||(17989098-17989185)
chr4 (170-257)||(18073804-18073891)
[»] chr1 (3 HSPs)
chr1 (72-257)||(268402-268587)
chr1 (1-257)||(28164407-28164663)
chr1 (1-257)||(28127724-28127981)
[»] chr8 (2 HSPs)
chr8 (5-257)||(29273828-29274080)
chr8 (47-187)||(31903770-31903910)
[»] scaffold0038 (4 HSPs)
scaffold0038 (32-257)||(34629-34854)
scaffold0038 (32-257)||(42870-43095)
scaffold0038 (32-257)||(27352-27577)
scaffold0038 (32-257)||(116700-116925)
[»] scaffold0019 (1 HSPs)
scaffold0019 (46-257)||(58340-58551)
[»] chr2 (2 HSPs)
chr2 (32-257)||(3279592-3279817)
chr2 (32-257)||(17993742-17993967)
[»] chr5 (1 HSPs)
chr5 (109-256)||(16688992-16689139)
[»] scaffold0003 (2 HSPs)
scaffold0003 (1-102)||(59446-59547)
scaffold0003 (170-257)||(59612-59699)


Alignment Details
Target: chr6 (Bit Score: 205; Significance: 1e-112; HSPs: 66)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 17 - 257
Target Start/End: Complemental strand, 27593318 - 27593078
Alignment:
Q  17 taccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattg 116  Q
    ||||||||||| |||||||| || || | |||||||||| | ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27593318 taccaagtattcctcagtttcagaggaagtgacactcggtacggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattg 27593219  T
Q  117 atgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgc 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27593218 atgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgc 27593119  T
Q  217 ctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  27593118 ctcttcttcgttttgtttggacgaacttgaccacatcattc 27593078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 27611316 - 27611060
Alignment:
Q  1 ttcctatgcattcacttaccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaaggga 100  Q
    |||||||| ||||||||||||||| || |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  27611316 ttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaaggga 27611217  T
Q  101 atcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgt 200  Q
    ||| | ||||||||||||||||||| ||||| ||||||| ||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||    
T  27611216 atccataccttcattgatgacaatgatcttccaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgt 27611117  T
Q  201 tttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  27611116 tttctatcaactatgcctcttcttcgttttgtttggacgaacttgtccacataattc 27611060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 27725159 - 27724903
Alignment:
Q  1 ttcctatgcattcacttaccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaaggga 100  Q
    |||||||| ||||||||||||||| || || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  27725159 ttcctatggattcacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaaggga 27725060  T
Q  101 atcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgt 200  Q
    ||| | ||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||    
T  27725059 atccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgt 27724960  T
Q  201 tttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||    
T  27724959 tttctatcaactatgcctattcttcgttttgtttggacgaacttgtccacataattc 27724903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 10 - 257
Target Start/End: Complemental strand, 27718684 - 27718437
Alignment:
Q  10 attcacttaccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaagggaatcaacacc 109  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| | |||    
T  27718684 attcacttaccaagtgttcctcagttttaggggcactgacactcggcacagttttaccggaaatctctacaaggctcttactgacaagggaatccatacc 27718585  T
Q  110 ttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatca 209  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||    
T  27718584 ttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatca 27718485  T
Q  210 actatgcctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||    
T  27718484 actatgcctcttcttcgttttgtttggacgaacttgtccacataattc 27718437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 27698808 - 27698552
Alignment:
Q  1 ttcctatgcattcacttaccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaaggga 100  Q
    |||||||| ||||||||||||||| ||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  27698808 ttcctatggattcacttaccaagtgttcatcagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaaggga 27698709  T
Q  101 atcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgt 200  Q
    ||| | ||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||    
T  27698708 atccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgt 27698609  T
Q  201 tttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
    ||||| |||||||||| |||||||| ||||||||||||||||||| |||||| ||||    
T  27698608 tttctctcaactatgcatcttcttcattttgtttggacgaacttgtccacataattc 27698552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 17 - 257
Target Start/End: Original strand, 27678835 - 27679075
Alignment:
Q  17 taccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattg 116  Q
    ||||||||||| |||||||| || || | |||||||||| | ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27678835 taccaagtattcctcagtttcagaggaagtgacactcggtacggtttcaccgggaatctctacaaggctcttactgacaagggaatcaacaccttcattg 27678934  T
Q  117 atgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgc 216  Q
    || | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27678935 ataagaatggtcttcaaagaggagatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgc 27679034  T
Q  217 ctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
    ||||||||| ||||||||||||||||||| |||||||||||    
T  27679035 ctcttcttcattttgtttggacgaacttgtccacatcattc 27679075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 28781012 - 28781256
Alignment:
Q  1 ttcctatgcattcacttaccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaaggga 100  Q
    ||||| |||||||||||||||||| || |||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||    
T  28781012 ttcctctgcattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaaggga 28781111  T
Q  101 atcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgt 200  Q
    ||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||    
T  28781112 atcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgt 28781211  T
Q  201 tttctatcaactatgcctcttcttcgttttgtttggacgaacttg 245  Q
    ||||||||||||||||| ||||    ||||| |||||||||||||    
T  28781212 tttctatcaactatgccacttcaaaattttgcttggacgaacttg 28781256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 28786151 - 28786363
Alignment:
Q  1 ttcctatgcattcacttaccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaaggga 100  Q
    |||||||| ||||||||||||||| || |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  28786151 ttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaaggga 28786250  T
Q  101 atcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgt 200  Q
    ||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||    
T  28786251 atcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgt 28786350  T
Q  201 tttctatcaacta 213  Q
    |||||||||||||    
T  28786351 tttctatcaacta 28786363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 28792272 - 28792484
Alignment:
Q  1 ttcctatgcattcacttaccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaaggga 100  Q
    |||||||| ||||||||||||||| || |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  28792272 ttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaaggga 28792371  T
Q  101 atcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgt 200  Q
    ||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||    
T  28792372 atcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgt 28792471  T
Q  201 tttctatcaacta 213  Q
    |||||||||||||    
T  28792472 tttctatcaacta 28792484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 27605019 - 27604763
Alignment:
Q  1 ttcctatgcattcacttaccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaaggga 100  Q
    |||||||||||||||||||||||| || || |||||||||||||||||||||||  | ||||||||||| ||||||||||||||||||||||||||||||    
T  27605019 ttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactgacaaggga 27604920  T
Q  101 atcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgt 200  Q
    ||  | |||||||||||||| |||| ||||| ||||||| |||||||||||||| ||||||||||||||||||| || || |||||||||||||||||||    
T  27604919 attcataccttcattgatgaaaatgatcttcgaagaggagatgaaatcacaccagcacttctcaaggccattgatgaatccaggatttttattcctgtgt 27604820  T
Q  201 tttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
    |||||||||| |||||||||||||| ||||||||||| |||||||  ||||||||||    
T  27604819 tttctatcaaatatgcctcttcttccttttgtttggatgaacttgttcacatcattc 27604763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 5 - 245
Target Start/End: Original strand, 26802319 - 26802559
Alignment:
Q  5 tatgcattcacttaccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaagggaatca 104  Q
    |||| ||||||||||||||| || ||||||||||||||||||||||||||| | |||||||| || ||||||||||||||||||| |||||||||||||     
T  26802319 tatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatcc 26802418  T
Q  105 acaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttc 204  Q
    | ||||||||||||||||||| ||||||||||||| |||||||||||||||||||  |||||||||||||||| ||||| ||||||||||||||||||||    
T  26802419 ataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttc 26802518  T
Q  205 tatcaactatgcctcttcttcgttttgtttggacgaacttg 245  Q
    ||||||||||||||||||    ||||| |||||||||||||    
T  26802519 tatcaactatgcctcttcaaaattttgcttggacgaacttg 26802559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 17 - 257
Target Start/End: Complemental strand, 27677912 - 27677672
Alignment:
Q  17 taccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattg 116  Q
    ||||||||||| |||| ||| || || | |||||||||| | ||||| ||||| ||||||||||||||||||  ||||||||||||| ||||||||||||    
T  27677912 taccaagtattcctcaatttcagaggaagtgacactcggtacggtttcaccggcaatctctacaaggctcttgatgacaagggaatccacaccttcattg 27677813  T
Q  117 atgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgc 216  Q
    |  |  |||  |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27677812 acaatcatgaacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattgctgtgttttctatcaactatgc 27677713  T
Q  217 ctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
    ||||||||| ||||||||||||||||||| |||||||||||    
T  27677712 ctcttcttcattttgtttggacgaacttgtccacatcattc 27677672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 31284161 - 31284417
Alignment:
Q  1 ttcctatgcattcacttaccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaaggga 100  Q
    |||||||| |||||  ||||||||||| || ||||| ||||| | |||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||    
T  31284161 ttcctatgtattcaaataccaagtattccttagtttcaggggaagtgacactcggtatggtttcaccggcaatctctacaaggctcttactgacaaggga 31284260  T
Q  101 atcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgt 200  Q
    ||| |||||||||||||||| | ||  |||||||||||  |||||||||||||||||||   ||| |||||||||||||||||||||||||| || ||||    
T  31284261 atccacaccttcattgatgatagtgaacttcaaagaggggatgaaatcacaccatcactcgacaatgccattgaagagtctaggatttttatccccgtgt 31284360  T
Q  201 tttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
    |||||  ||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  31284361 tttctgccaactatgcctcttcgtcgttttgtttggacgaacttgtccacatcattc 31284417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 27229105 - 27229347
Alignment:
Q  1 ttcctatgcattcacttaccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaaggga 100  Q
    ||||| || ||||||||||||||| || || |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  27229105 ttcctttggattcacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggcaatctctacaaggctcttactgacaaggga 27229204  T
Q  101 atcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgt 200  Q
    ||| | ||||||||||||||||||| ||||||||||||| | |||||||||||||||||  ||||||||||||| || ||| |||||||||||||  | |    
T  27229205 atccataccttcattgatgacaatgatcttcaaagaggagacgaaatcacaccatcactcgtcaaggccattgacgaatctcggatttttattcccatat 27229304  T
Q  201 tttctatcaactatgcctcttcttcgttttgtttggacgaact 243  Q
    |||||  ||||||||| |||||||| ||||||||| |||||||    
T  27229305 tttctgccaactatgcatcttcttcattttgtttgaacgaact 27229347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 9 - 254
Target Start/End: Complemental strand, 27531503 - 27531258
Alignment:
Q  9 cattcacttaccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaagggaatcaacac 108  Q
    |||||||||||||||| || ||||||||||||||| | |||||||| || ||||||||||||||||||||||||||||||||||||||||||||| | ||    
T  27531503 cattcacttaccaagtgttcctcagttttaggggcgcggacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatctatac 27531404  T
Q  109 cttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatc 208  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||||    || ||||||||| | ||||||||||||||||| || ||||||       
T  27531403 cttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactaaaaaatgccattgaaaaatctaggatttttattcccgtattttctgaa 27531304  T
Q  209 aactatgcctcttcttcgttttgtttggacgaacttgaccacatca 254  Q
    |||||||| |||||||| |||||||||||||||||||  |||||||    
T  27531303 aactatgcatcttcttcattttgtttggacgaacttgttcacatca 27531258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 26884036 - 26884287
Alignment:
Q  1 ttcctatgcattcacttaccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaaggga 100  Q
    |||||||| ||||||||||||||| || |||||||| || || | |||||||||| ||||||| || |||||||||||||||||||||||| ||||||||    
T  26884036 ttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctcttactaacaaggga 26884135  T
Q  101 atcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgt 200  Q
    ||| |||||||||||||||| |||  ||||| ||||||||  |||||||||||||||||  |||||||||||||||| ||||| |||||||||||  | |    
T  26884136 atccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattccaatat 26884235  T
Q  201 tttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacat 252  Q
    |||||| ||||||||| |||||||| ||||||||||||||||||| ||||||    
T  26884236 tttctaccaactatgcatcttcttcattttgtttggacgaacttgtccacat 26884287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 26646352 - 26646608
Alignment:
Q  1 ttcctatgcattcacttaccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaaggga 100  Q
    |||||| | |||||| ||||| || || ||||  || ||||||| |||||||||  | |||||||| ||| |||||||||||||||||||||||||||||    
T  26646352 ttcctacggattcacctaccaggtcttcctcaacttcaggggcagtgacactcgtgacggttttactggacatctctacaaggctcttactgacaaggga 26646451  T
Q  101 atcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgt 200  Q
    ||  ||||||||||||||||   || |||| | |||||| |||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||    
T  26646452 attcacaccttcattgatgattgtgatcttaagagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgt 26646551  T
Q  201 tttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
    |||||||||||||||||||||||   ||||||||||||||||||| |||||||||||    
T  26646552 tttctatcaactatgcctcttctaaattttgtttggacgaacttgtccacatcattc 26646608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 26752320 - 26752576
Alignment:
Q  1 ttcctatgcattcacttaccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaaggga 100  Q
    |||||| | |||||| ||||| || || ||||  || ||||||| |||||||||  | |||||||| ||| |||||||||||||||||||||||||||||    
T  26752320 ttcctacggattcacctaccaggtcttcctcaacttcaggggcagtgacactcgtgacggttttactggacatctctacaaggctcttactgacaaggga 26752419  T
Q  101 atcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgt 200  Q
    ||  ||||||||||||||||   || |||| | |||||| |||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||    
T  26752420 attcacaccttcattgatgattgtgatcttaagagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgt 26752519  T
Q  201 tttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
    |||||||||||||||||||||||   ||||||||||||||||||| |||||||||||    
T  26752520 tttctatcaactatgcctcttctaaattttgtttggacgaacttgtccacatcattc 26752576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 17 - 257
Target Start/End: Complemental strand, 27706700 - 27706460
Alignment:
Q  17 taccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattg 116  Q
    ||||||||||| |||||||| || ||   |||||||||| | ||||| || || ||||||||||||||| ||  ||||||||||||| ||||||||||||    
T  27706700 taccaagtattcctcagtttcagaggaggtgacactcggtacggtttcacaggcaatctctacaaggcttttgatgacaagggaatccacaccttcattg 27706601  T
Q  117 atgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgc 216  Q
    |  |  |||  ||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  27706600 acaatcatgaacttcaaagaagggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgc 27706501  T
Q  217 ctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
    ||||||||| ||||||||||||||||||| |||||||||||    
T  27706500 ctcttcttcattttgtttggacgaacttgtccacatcattc 27706460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 17 - 257
Target Start/End: Original strand, 26655878 - 26656118
Alignment:
Q  17 taccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattg 116  Q
    |||||||| || |||||||||||||||| |||||| ||||| ||||||||||| ||||||||||||||||||| ||| ||||||||| | || |||||||    
T  26655878 taccaagtgttcctcagttttaggggcattgacacccggcacggttttaccggcaatctctacaaggctcttattgataagggaatccatactttcattg 26655977  T
Q  117 atgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgc 216  Q
    ||||||||| |||||  |||||| |||||||||||||||||||  | |||||||||||||| || ||||||||||||||  | ||||||  |||||||||    
T  26655978 atgacaatgatcttctcagaggagatgaaatcacaccatcactcgttaaggccattgaagaatccaggatttttattcccatattttctgccaactatgc 26656077  T
Q  217 ctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
     |||||||| ||||||||||||||||||| |||||||||||    
T  26656078 atcttcttcattttgtttggacgaacttgtccacatcattc 26656118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 17 - 257
Target Start/End: Original strand, 26761849 - 26762089
Alignment:
Q  17 taccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattg 116  Q
    |||||||| || |||||||||||||||| |||||| ||||| ||||||||||| ||||||||||||||||||| ||| ||||||||| | || |||||||    
T  26761849 taccaagtgttcctcagttttaggggcattgacacccggcacggttttaccggcaatctctacaaggctcttattgataagggaatccatactttcattg 26761948  T
Q  117 atgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgc 216  Q
    ||||||||| |||||  |||||| |||||||||||||||||||  | |||||||||||||| || ||||||||||||||  | ||||||  |||||||||    
T  26761949 atgacaatgatcttctcagaggagatgaaatcacaccatcactcgttaaggccattgaagaatccaggatttttattcccatattttctgccaactatgc 26762048  T
Q  217 ctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
     |||||||| ||||||||||||||||||| |||||||||||    
T  26762049 atcttcttcattttgtttggacgaacttgtccacatcattc 26762089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 29 - 257
Target Start/End: Complemental strand, 27338351 - 27338123
Alignment:
Q  29 ctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtc 128  Q
    ||||||||||||| || ||||||||   | ||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||| | ||    
T  27338351 ctcagttttagggacattgacactctttacggttttaccggcaatctctacaaggctcttattgacaagggaatcaaaaccttcattgatgacaacgatc 27338252  T
Q  129 ttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgtt 228  Q
    || |||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||| |||||  | ||||||   |||||||| |||||||| ||    
T  27338251 ttgaaagaggagatgaaagcacaccatcacttgtcaaggccattgaagagtctaggattttgattcccatattttctgcaaactatgcatcttcttcatt 27338152  T
Q  229 ttgtttggacgaacttgaccacatcattc 257  Q
    ||| ||||||||||||| |||||||||||    
T  27338151 ttgcttggacgaacttgtccacatcattc 27338123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 29 - 257
Target Start/End: Complemental strand, 27399091 - 27398863
Alignment:
Q  29 ctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtc 128  Q
    ||||||||||||| || ||||||||   | ||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||| | ||    
T  27399091 ctcagttttagggacattgacactctttacggttttaccggcaatctctacaaggctcttattgacaagggaatcaaaaccttcattgatgacaacgatc 27398992  T
Q  129 ttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgtt 228  Q
    || |||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||| |||||  | ||||||   |||||||| |||||||| ||    
T  27398991 ttgaaagaggagatgaaagcacaccatcacttgtcaaggccattgaagagtctaggattttgattcccatattttctgcaaactatgcatcttcttcatt 27398892  T
Q  229 ttgtttggacgaacttgaccacatcattc 257  Q
    ||| ||||||||||||| |||||||||||    
T  27398891 ttgcttggacgaacttgtccacatcattc 27398863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 17 - 257
Target Start/End: Original strand, 26823729 - 26823969
Alignment:
Q  17 taccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattg 116  Q
    |||||||| |||||||||||||| ||| ||||||||||| |||  |||||||| |||||||||||||||||||| |||||||||||| |||||||  |||    
T  26823729 taccaagtgtttctcagttttagaggcgctgacactcggtatgaatttaccggcaatctctacaaggctcttacagacaagggaatccacaccttttttg 26823828  T
Q  117 atgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgc 216  Q
    ||||   ||  |||||||||||  || |||||  || ||||||    || |||||||||||||||||||||||||||||||||||||||  |||||||||    
T  26823829 atgatcgtgaacttcaaagaggggataaaatcgaacaatcactcaataatgccattgaagagtctaggatttttattcctgtgttttctgccaactatgc 26823928  T
Q  217 ctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
    ||||||||| ||||||||||||||||||| |||||||||||    
T  26823929 ctcttcttcattttgtttggacgaacttgtccacatcattc 26823969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 17 - 257
Target Start/End: Original strand, 26622865 - 26623105
Alignment:
Q  17 taccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattg 116  Q
    |||||||| || || ||||| || |||| |||||||||| | ||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  26622865 taccaagtgttcctaagtttcagaggcagtgacactcggtacggtttcactggaaatctctacaaggctcttactgacaagggaatccacaccttcattg 26622964  T
Q  117 atgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgc 216  Q
    ||||   ||  |||||||||||  | ||||||| ||||||||||  ||| || || |||||||||||||||||||||||||||||||||  |||||||||    
T  26622965 atgatcgtgaacttcaaagaggggacgaaatcaaaccatcacttgacaatgctatcgaagagtctaggatttttattcctgtgttttctcccaactatgc 26623064  T
Q  217 ctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
     | |||||| ||||||||||| ||||||| |||||||||||    
T  26623065 atattcttcattttgtttggatgaacttgtccacatcattc 26623105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 17 - 257
Target Start/End: Original strand, 26728843 - 26729083
Alignment:
Q  17 taccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattg 116  Q
    |||||||| || || ||||| || |||| |||||||||| | ||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  26728843 taccaagtgttcctaagtttcagaggcagtgacactcggtacggtttcactggaaatctctacaaggctcttactgacaagggaatccacaccttcattg 26728942  T
Q  117 atgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgc 216  Q
    ||||   ||  |||||||||||  | ||||||| ||||||||||  ||| || || |||||||||||||||||||||||||||||||||  |||||||||    
T  26728943 atgatcgtgaacttcaaagaggggacgaaatcaaaccatcacttgacaatgctatcgaagagtctaggatttttattcctgtgttttctcccaactatgc 26729042  T
Q  217 ctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
     | |||||| ||||||||||| ||||||| |||||||||||    
T  26729043 atattcttcattttgtttggatgaacttgtccacatcattc 26729083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 61 - 257
Target Start/End: Original strand, 25579652 - 25579848
Alignment:
Q  61 ttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcactt 160  Q
    ||||||||| |||||||| |||||||||  ||||||||||||    |||||| ||||||| |||| ||||||||||||| ||||||||||||||||||||    
T  25579652 ttttaccggtaatctctataaggctcttgttgacaagggaattcgtaccttctttgatgataatgatcttcaaagaggagatgaaatcacaccatcactt 25579751  T
Q  161 ctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
     |||||||||||||||| |||||||||||||||||  | ||||||  ||||||||| |||||||| ||||||||||||||||||| |||||||||||    
T  25579752 gtcaaggccattgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattc 25579848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 32 - 256
Target Start/End: Original strand, 28234468 - 28234692
Alignment:
Q  32 agttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttc 131  Q
    |||||||| || | |||||||||  |||||||||||| ||||||||| |  ||||||  | ||||||||||| ||||||||||||||||||  |  ||||    
T  28234468 agttttagaggtagtgacactcgctatggttttaccgaaaatctctatagagctctttgtcacaagggaatccacaccttcattgatgacagggagcttc 28234567  T
Q  132 aaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttg 231  Q
    || ||||| ||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||| || |||||||| ||||| |||||||| |||||    
T  28234568 aaggaggagatgaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttg 28234667  T
Q  232 tttggacgaacttgaccacatcatt 256  Q
     ||||||||||||| ||||||||||    
T  28234668 cttggacgaacttgtccacatcatt 28234692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 26861489 - 26861744
Alignment:
Q  1 ttcctatgcattcacttaccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaaggga 100  Q
    |||||||| |||||  ||||| ||||| |||||||| || || | |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  26861489 ttcctatggattcaaataccaggtattcctcagtttcagaggaagtgacactcggtatggttttaccggtaatctctacaaggctcttactgacaaggga 26861588  T
Q  101 atcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgt 200  Q
    ||  |||||||||| |||||   ||  |||||||||||  ||||||||| |  ||||||   ||| ||||||||||||||||| ||||| ||||||||||    
T  26861589 attcacaccttcatggatgatcgtgaacttcaaagaggggatgaaatcaaaagatcactcgacaatgccattgaagagtctagaattttcattcctgtgt 26861688  T
Q  201 tttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcatt 256  Q
    |||||  ||||||||||||||| || ||||||||||| ||||||| ||| ||||||    
T  26861689 tttctgccaactatgcctcttcgtcattttgtttggatgaacttgtccaaatcatt 26861744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 61 - 257
Target Start/End: Original strand, 25481675 - 25481871
Alignment:
Q  61 ttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcactt 160  Q
    ||||||||| |||||||| |||||||||  ||||||||||||    || ||||||||||| |||| ||||||||||||| ||||||||||||||||||||    
T  25481675 ttttaccggtaatctctataaggctcttgttgacaagggaattcgtactttcattgatgaaaatgatcttcaaagaggagatgaaatcacaccatcactt 25481774  T
Q  161 ctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
     |||||||||||||||| |||||||||| ||||||  | ||||||  ||||||||| |||||||| ||||||||||||||||||| |||||||||||    
T  25481775 gtcaaggccattgaagaatctaggatttgtattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattc 25481871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 61 - 257
Target Start/End: Original strand, 26055859 - 26056055
Alignment:
Q  61 ttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcactt 160  Q
    ||||||||| |||||||| |||||||||  |||||||||||| || || ||||||||||| |||| ||||||||||||| ||||||||||| ||||||||    
T  26055859 ttttaccggtaatctctataaggctcttgttgacaagggaattaatactttcattgatgaaaatgatcttcaaagaggagatgaaatcacatcatcactt 26055958  T
Q  161 ctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
     |||||||||| ||||| ||| |||||||||||||  | ||||||  ||||||||| |||||||| ||||||||||||||||||| |||||||||||    
T  26055959 gtcaaggccatcgaagaatctgggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattc 26056055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 61 - 257
Target Start/End: Original strand, 26075829 - 26076025
Alignment:
Q  61 ttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcactt 160  Q
    ||||||||| |||||||| |||||||||  |||||||||||| || || ||||||||||| |||| ||||||||||||| ||||||||||| ||||||||    
T  26075829 ttttaccggtaatctctataaggctcttgttgacaagggaattaatactttcattgatgaaaatgatcttcaaagaggagatgaaatcacatcatcactt 26075928  T
Q  161 ctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
     |||||||||| ||||| ||| |||||||||||||  | ||||||  ||||||||| |||||||| ||||||||||||||||||| |||||||||||    
T  26075929 gtcaaggccatcgaagaatctgggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattc 26076025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 29 - 257
Target Start/End: Original strand, 26142766 - 26142994
Alignment:
Q  29 ctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtc 128  Q
    |||||||| ||||||| |||||||||  |    |||||||| |||||||| |||||||||  ||||||||||||    || ||||||||||| |||| ||    
T  26142766 ctcagtttcaggggcagtgacactcgcaacaaatttaccggtaatctctataaggctcttgttgacaagggaattcgtactttcattgatgataatgatc 26142865  T
Q  129 ttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgtt 228  Q
    || |||||||| |||||||||||||||||||| |||||||||||||||| |||||||||||||||||  | ||||||  ||||||||| |||||||| ||    
T  26142866 ttgaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcatt 26142965  T
Q  229 ttgtttggacgaacttgaccacatcattc 257  Q
    ||||||||||||||||| |||||||||||    
T  26142966 ttgtttggacgaacttgtccacatcattc 26142994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 29 - 257
Target Start/End: Original strand, 25538441 - 25538669
Alignment:
Q  29 ctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtc 128  Q
    |||||||| ||||||| |||||||||  |    |||||||| |||||||| |||||||||  |||||||||||| |  || ||||| ||||| |||| ||    
T  25538441 ctcagtttcaggggcagtgacactcgcaacaaatttaccggtaatctctataaggctcttgttgacaagggaattagtactttcatagatgataatgatc 25538540  T
Q  129 ttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgtt 228  Q
    || |||||||| |||||||||||||||||||| |||||||||| ||||| ||||| |||||||||||  | ||||||  ||||||||| |||||||| ||    
T  25538541 ttgaaagaggagatgaaatcacaccatcacttgtcaaggccatcgaagaatctagaatttttattcccatattttctgccaactatgcatcttcttcatt 25538640  T
Q  229 ttgtttggacgaacttgaccacatcattc 257  Q
    ||||||||||||||||| ||| |||||||    
T  25538641 ttgtttggacgaacttgtccagatcattc 25538669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 29 - 257
Target Start/End: Original strand, 26048746 - 26048974
Alignment:
Q  29 ctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtc 128  Q
    |||||||| ||||||| |||||||||  |   ||||||||| |||||||| |||||||| | ||||||||||||    || ||||||||||| |||| ||    
T  26048746 ctcagtttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctctcattgacaagggaatttgtactttcattgatgataatgatc 26048845  T
Q  129 ttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgtt 228  Q
    || |||||||| |||||||||||||   |||| |||||||||| ||||| |||||||||||||||||  | ||||||  ||||||||| |||||||| ||    
T  26048846 ttgaaagaggagatgaaatcacacccaaacttgtcaaggccatggaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcatt 26048945  T
Q  229 ttgtttggacgaacttgaccacatcattc 257  Q
    ||||||||||||||||| |||||||||||    
T  26048946 ttgtttggacgaacttgtccacatcattc 26048974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 29 - 257
Target Start/End: Original strand, 26069915 - 26070143
Alignment:
Q  29 ctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtc 128  Q
    |||||||| ||||||| |||||||||  |   ||||||||| |||||||| |||||||| | ||||||||||||    || ||||||||||| |||| ||    
T  26069915 ctcagtttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctctcattgacaagggaatttgtactttcattgatgataatgatc 26070014  T
Q  129 ttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgtt 228  Q
    || |||||||| |||||||||||||   |||| |||||||||| ||||| |||||||||||||||||  | ||||||  ||||||||| |||||||| ||    
T  26070015 ttgaaagaggagatgaaatcacacccaaacttgtcaaggccatggaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcatt 26070114  T
Q  229 ttgtttggacgaacttgaccacatcattc 257  Q
    ||||||||||||||||| |||||||||||    
T  26070115 ttgtttggacgaacttgtccacatcattc 26070143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 32 - 257
Target Start/End: Original strand, 28242708 - 28242933
Alignment:
Q  32 agttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttc 131  Q
    |||||||| || | |||||||||  |||||||||| |||||||||||||| | ||||  | | ||||||||   |||||||||||||||||  |  ||||    
T  28242708 agttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagaacttc 28242807  T
Q  132 aaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttg 231  Q
     | ||||  |  |||| |||||||||||| |||||||||||||||||||||||||||| |||||||| || |||||||| ||||| |||||||| |||||    
T  28242808 caggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttg 28242907  T
Q  232 tttggacgaacttgaccacatcattc 257  Q
     ||||||||||||| |||||||||||    
T  28242908 cttggacgaacttgtccacatcattc 28242933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 46 - 257
Target Start/End: Original strand, 28181032 - 28181243
Alignment:
Q  46 tgacactcggcatggttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaa 145  Q
    |||||||||  |||||||||| ||||||||| | |  ||||||  |||||||||||||   |||||||| |||||||  |  |||||| ||||  | |||    
T  28181032 tgacactcgttatggttttactggaaatctcaatagagctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgaagaa 28181131  T
Q  146 atcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttg 245  Q
    || ||| |||||||| |||||||||||||||||||||||||||| ||||| || || |||||||| ||||| |||||||| ||||| |||||||||||||    
T  28181132 ataacatcatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttg 28181231  T
Q  246 accacatcattc 257  Q
     |||||||||||    
T  28181232 tccacatcattc 28181243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 46 - 256
Target Start/End: Original strand, 28185284 - 28185494
Alignment:
Q  46 tgacactcggcatggttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaa 145  Q
    |||||||||  || ||||||| ||||||||| | |  ||||||  |||||||||||||   |||||||| |||||||  |  |||||| ||||  | |||    
T  28185284 tgacactcgttatcgttttactggaaatctcaatagagctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgaagaa 28185383  T
Q  146 atcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttg 245  Q
    || ||| |||||||| |||||||||||||||||||||||||||| ||||| || || |||||||| ||||| |||||||| ||||| |||||||||||||    
T  28185384 ataacatcatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttg 28185483  T
Q  246 accacatcatt 256  Q
     ||||||||||    
T  28185484 tccacatcatt 28185494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 32 - 257
Target Start/End: Original strand, 28226854 - 28227079
Alignment:
Q  32 agttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttc 131  Q
    |||||||| || | |||||||||  |||||||||| |||||||||||||  | ||||  | | ||||||||  |||| ||| ||||||| |  |  ||||    
T  28226854 agttttagaggtattgacactcgttatggttttactggaaatctctacagtgatctttgtaagaagggaattcacacattctttgatgatagagagcttc 28226953  T
Q  132 aaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttg 231  Q
    || ||||  ||||||| ||| |||||||| |||||| ||||||||| ||||||||||| |||||||| || |||||||| ||||| |||||||| |||||    
T  28226954 aaggaggtgatgaaataacatcatcacttttcaaggtcattgaagaatctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttg 28227053  T
Q  232 tttggacgaacttgaccacatcattc 257  Q
     ||||||||||||| |||||||||||    
T  28227054 cttggacgaacttgtccacatcattc 28227079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 32 - 257
Target Start/End: Original strand, 28325385 - 28325610
Alignment:
Q  32 agttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttc 131  Q
    |||||||| || | |||||||||  |||||||||| |||||||||||||| | ||||  |   ||| ||||    ||||||||||||||||| |  ||||    
T  28325385 agttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaggaagagaattcgtaccttcattgatgacaaagaccttc 28325484  T
Q  132 aaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttg 231  Q
    || ||||  | ||||| ||||| |||||| |||||||||||||||||||||||||||| |||||| | || |||||||| ||||| |||||||| |||||    
T  28325485 aacgaggtgacgaaataacaccgtcacttttcaaggccattgaagagtctaggattttcattcctattttgtctatcaattatgcttcttcttccttttg 28325584  T
Q  232 tttggacgaacttgaccacatcattc 257  Q
     ||||| ||||||| |||||| ||||    
T  28325585 cttggatgaacttgtccacattattc 28325610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 34 - 257
Target Start/End: Complemental strand, 28098650 - 28098427
Alignment:
Q  34 ttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaa 133  Q
    |||||||||||| ||||||||| |||||||||| |||||||||||||| ||||||  ||||   ||| ||  ||||||||||||  | || | ||||||     
T  28098650 ttttaggggcaccgacactcggtatggttttactggaaatctctacaaagctctttgtgacggaggagtccgcaccttcattgaccataaagatcttcat 28098551  T
Q  134 agaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtt 233  Q
      |||  ||  |||||||| ||| ||| |||||||||| |||||||| |||||||| ||||| || || ||||  |||||||| ||||||| ||||||||    
T  28098550 gaaggtgatagaatcacacaatcccttgtcaaggccatcgaagagtccaggattttaattccggtcttctctaagaactatgcttcttctttgttttgtt 28098451  T
Q  234 tggacgaacttgaccacatcattc 257  Q
    |||| ||||||| |||||||||||    
T  28098450 tggatgaacttgtccacatcattc 28098427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 26 - 256
Target Start/End: Original strand, 28139439 - 28139669
Alignment:
Q  26 tttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatg 125  Q
    |||||||| || || |||| |||||||||    ||||| || |||||||||||||| ||||||  ||||   |||||| |||| || |||||||| |  |    
T  28139439 tttctcagcttcagaggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgataggg 28139538  T
Q  126 gtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttc 225  Q
      |||||| ||||  | |||||  |||| |||||  | || ||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||||    
T  28139539 agcttcaaggaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttcttc 28139638  T
Q  226 gttttgtttggacgaacttgaccacatcatt 256  Q
    |||||| ||||||||||||| ||||||||||    
T  28139639 gttttgcttggacgaacttgtccacatcatt 28139669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 144 - 257
Target Start/End: Complemental strand, 26342105 - 26341992
Alignment:
Q  144 aaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaact 243  Q
    ||||||||| ||||||| |||| |||||||||||||| |||||||| |||||  | || || ||||||||||| ||||||||||||||||||||||||||    
T  26342105 aaatcacacaatcacttgtcaaagccattgaagagtccaggattttcattccaattttctcaatcaactatgcttcttcttcgttttgtttggacgaact 26342006  T
Q  244 tgaccacatcattc 257  Q
    || |||||||||||    
T  26342005 tgtccacatcattc 26341992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 71 - 257
Target Start/End: Original strand, 26848603 - 26848789
Alignment:
Q  71 aatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggcca 170  Q
    |||||||| || |||||| ||||||| ||||||   ||||||||||||||||| | |||||| || ||  |||| |||||||| || || ||||||  ||    
T  26848603 aatctctataaagctctttctgacaatggaatccgaaccttcattgatgacaaggatcttcagagtggtgatgagatcacaccttcgctcctcaagaaca 26848702  T
Q  171 ttgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
    ||||||| || |||||||  |||| ||| || |||   ||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  26848703 ttgaagactcgaggatttccattcttgtattctctgagaactatgccacttcttcgttttgtttggacgaacttgtccacatcattc 26848789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 143 - 257
Target Start/End: Original strand, 28149953 - 28150066
Alignment:
Q  143 gaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaac 242  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||| |||||  | || |||||||||||| | |||||||| ||||||||||||||||    
T  28149953 gaaatcacaccatcact-ctcaaggccattgaagagtccaggattttcattccaatcttctctatcaactatacttcttcttcattttgtttggacgaac 28150051  T
Q  243 ttgaccacatcattc 257  Q
    ||| |||||| ||||    
T  28150052 ttgtccacattattc 28150066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 106 - 253
Target Start/End: Original strand, 26937072 - 26937219
Alignment:
Q  106 caccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttct 205  Q
    |||||||||||||||||| |  || ||  ||||| | |||||||||||||||||| ||||||| |||||||| ||  |||||   || ||||| || |||    
T  26937072 caccttcattgatgacaaggagctccatggaggagaagaaatcacaccatcacttgtcaaggcaattgaagattccgggattgccatacctgtattctct 26937171  T
Q  206 atcaactatgcctcttcttcgttttgtttggacgaacttgaccacatc 253  Q
    |||||||||||| ||||||| ||||||||||||||||||| |||||||    
T  26937172 atcaactatgccacttcttcattttgtttggacgaacttgtccacatc 26937219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 106 - 257
Target Start/End: Complemental strand, 28297922 - 28297771
Alignment:
Q  106 caccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttct 205  Q
    |||||||||||||||||  |  ||| || ||||  | ||||| |||||||||||| |||||  |||||||||| |||||||||| |||||||| || |||    
T  28297922 caccttcattgatgacagagagcttaaaggaggtgacgaaataacaccatcacttttcaagcacattgaagagactaggattttcattcctgtcttatct 28297823  T
Q  206 atcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
    | ||| ||||| |||||||| ||||| ||||||||||||| |||||||||||    
T  28297822 accaattatgcttcttcttcattttgcttggacgaacttgtccacatcattc 28297771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 106 - 257
Target Start/End: Original strand, 28514151 - 28514302
Alignment:
Q  106 caccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttct 205  Q
    |||||||||||||||||  |  ||| || ||||  | ||||| |||||||||||| |||||  |||||||||| |||||||||| |||||||| || |||    
T  28514151 caccttcattgatgacagagagcttaaaggaggtgacgaaataacaccatcacttttcaagcacattgaagagactaggattttcattcctgtcttatct 28514250  T
Q  206 atcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
    | ||| ||||| |||||||| ||||| ||||||||||||| |||||||||||    
T  28514251 accaattatgcttcttcttcattttgcttggacgaacttgtccacatcattc 28514302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 58 - 245
Target Start/End: Original strand, 29825957 - 29826144
Alignment:
Q  58 tggttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatca 157  Q
    |||||||||||| ||||||||||| ||||| |||||||||  |||   |||||||||||||||||| |  |||||||||||  | ||||||||||| |||    
T  29825957 tggttttaccggcaatctctacaaagctctaactgacaagaaaattcgcaccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctca 29826056  T
Q  158 cttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttg 245  Q
    ||| | ||||| ||| |||| ||||||||    |||||| | || |||| ||| ||||| |||||||||||||| || || |||||||    
T  29826057 cttgtgaaggcaattcaagaatctaggatagccattcctattttctctaccaattatgcttcttcttcgttttgcttagatgaacttg 29826144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 257
Target Start/End: Original strand, 26635621 - 26635819
Alignment:
Q  59 ggttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcac 158  Q
    ||||| ||||| || ||||| || |||||| ||||||| |||||||||||||||||||||||||| |  ||| ||| |||  ||||||||||||| || |    
T  26635621 ggtttcaccggtaacctctataaagctctttctgacaaaggaatcaacaccttcattgatgacaaggagcttaaaaaaggggatgaaatcacaccttcgc 26635720  T
Q  159 ttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
    | ||||||  |||||||||||| ||||||   |||   || || ||||   | ||||| ||||||| |||||||||||| ||||||| |||||||||||    
T  26635721 tcctcaagagcattgaagagtcgaggattgccattatcgttttctctaaggaatatgcttcttctttgttttgtttggatgaacttgtccacatcattc 26635819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 257
Target Start/End: Original strand, 26741587 - 26741785
Alignment:
Q  59 ggttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcac 158  Q
    ||||| ||||| || ||||| || |||||| ||||||| |||||||||||||||||||||||||| |  ||| ||| |||  ||||||||||||| || |    
T  26741587 ggtttcaccggtaacctctataaagctctttctgacaaaggaatcaacaccttcattgatgacaaggagcttaaaaaaggggatgaaatcacaccttcgc 26741686  T
Q  159 ttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
    | ||||||  |||||||||||| ||||||   |||   || || ||||   | ||||| ||||||| |||||||||||| ||||||| |||||||||||    
T  26741687 tcctcaagagcattgaagagtcgaggattgccattatcgttttctctaaggaatatgcttcttctttgttttgtttggatgaacttgtccacatcattc 26741785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 132 - 245
Target Start/End: Complemental strand, 25507092 - 25506979
Alignment:
Q  132 aaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttg 231  Q
    |||||||| ||||||||||||||||| |  |||  ||||||||||| ||||||||||||||||| ||  ||||||||||||||||||||||    |||||    
T  25507092 aaagaggagatgaaatcacaccatcagtcgtcatcgccattgaagaatctaggatttttattccggttctttctatcaactatgcctcttcaaaattttg 25506993  T
Q  232 tttggacgaacttg 245  Q
    |||||| |||||||    
T  25506992 tttggaggaacttg 25506979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 59 - 257
Target Start/End: Original strand, 26974983 - 26975181
Alignment:
Q  59 ggttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcac 158  Q
    ||||| ||||| || ||||| || |||||| ||||||| |||||||||| ||||||||||||||| |  ||| ||| |||  | ||||||||||| || |    
T  26974983 ggtttcaccggtaacctctataaagctctttctgacaaaggaatcaacatcttcattgatgacaaggagcttaaaaaaggggacgaaatcacaccttcgc 26975082  T
Q  159 ttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
    | ||||||  ||||||||| || ||||||   |||   || || ||||   ||||||| |||||||| ||||||||||||||||||| |||||||||||    
T  26975083 tcctcaagagcattgaagactcgaggattaccattatcgtcttctctaaagactatgcttcttcttcattttgtttggacgaacttgtccacatcattc 26975181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 257
Target Start/End: Original strand, 2184302 - 2184417
Alignment:
Q  142 tgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaa 241  Q
    |||||| ||| |||||||| | || |||||||||||||| || ||||| || ||||| || || |  |||||||| |||||||| |||||||||||||||    
T  2184302 tgaaataacagcatcacttatgaaagccattgaagagtccagaattttcatccctgttttctcaaagaactatgcttcttcttcattttgtttggacgaa 2184401  T
Q  242 cttgaccacatcattc 257  Q
    |||| |||||||||||    
T  2184402 cttgtccacatcattc 2184417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 257
Target Start/End: Original strand, 26959097 - 26959295
Alignment:
Q  60 gttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcact 159  Q
    |||| ||||| || ||||| || |||||| ||||||| |||||| ||||||||||||||||||| |  ||| ||| |||  ||||||||||||| || ||    
T  26959097 gtttcaccggtaacctctataaagctctttctgacaaaggaatcgacaccttcattgatgacaaagagcttaaaaaaggggatgaaatcacaccttcgct 26959196  T
Q  160 tctc-aaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
    |||| |||  ||||||||| || ||||||   |||   || || ||||   | ||||| ||||||||||||| |||||| ||||||| |||||||||||    
T  26959197 tctcaaagagcattgaagactcgaggattgccattatcgttttctctaaggaatatgcttcttcttcgttttatttggatgaacttgtccacatcattc 26959295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 257
Target Start/End: Complemental strand, 27665400 - 27665175
Alignment:
Q  32 agttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttc 131  Q
    ||||| ||||| || ||||||||   |||||| ||||| || ||||| ||||||||| ||||||| |||||| ||||||||||||||||||| |  ||||    
T  27665400 agtttcaggggtaccgacactcgatttggtttcaccggtaacctctataaggctctttctgacaaaggaatccacaccttcattgatgacaaggagcttc 27665301  T
Q  132 aaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttg 231  Q
     ||  ||  | ||||||||||| ||||| |  |||  ||||||||| || ||||||   |||  | | || ||||  ||||||||  ||||||| |||||    
T  27665300 caactggtgacgaaatcacaccttcactccggaagagcattgaagaatcgaggattgccattattatattctctaagaactatgctacttcttcattttg 27665201  T
Q  232 tttggacgaacttgaccacatcattc 257  Q
    ||| || ||||||| |||||||||||    
T  27665200 tttagatgaacttgtccacatcattc 27665175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 257
Target Start/End: Original strand, 25071590 - 25071788
Alignment:
Q  59 ggttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcac 158  Q
    ||||||||||| ||||| || || |||||| ||||||| |||||| ||||||| ||||||||||| |  ||| | |||||  | ||||||||||| || |    
T  25071590 ggttttaccggtaatctttataaagctctttctgacaaaggaatccacacctttattgatgacaaagagcttaagagaggtgacgaaatcacaccttcgc 25071689  T
Q  159 ttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
    | | ||||  ||||||||| || || |||   |||   || || ||||   ||||||| |||||||| |||||||| |||||||||| |||||||||||    
T  25071690 tccgcaagagcattgaagattcgagaattgccattatcgtcttctctaaagactatgcttcttcttcattttgtttagacgaacttgtccacatcattc 25071788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 105 - 243
Target Start/End: Complemental strand, 26893681 - 26893543
Alignment:
Q  105 acaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttc 204  Q
    |||||||||||||||| |  |  ||||| |||||  | |||||| ||||||||||| ||||||| ||||||||||||| ||| |  ||||| ||  | ||    
T  26893681 acaccttcattgatgatacagagcttcatagaggtgacgaaatctcaccatcacttatcaaggcaattgaagagtctatgatatacattccagtcctctc 26893582  T
Q  205 tatcaactatgcctcttcttcgttttgtttggacgaact 243  Q
    |||||||||||| ||||||   ||||||||||| |||||    
T  26893581 tatcaactatgcttcttctatattttgtttggaagaact 26893543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 254
Target Start/End: Original strand, 27214321 - 27214543
Alignment:
Q  32 agttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttc 131  Q
    ||||| ||||| || |||||||| || ||||| ||||| |||||||| || ||||||  |||||| ||||||   ||||||||||||||||| |  ||||    
T  27214321 agtttcaggggtaccgacactcgacacggtttcaccggtaatctctataaagctctttgtgacaaaggaatccgaaccttcattgatgacaaggagcttc 27214420  T
Q  132 aaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttg 231  Q
    | |||||  | ||||||||| | || || | ||||   |||||||| || ||||||| | ||  ||| || ||    ||||||||  ||||||| |||||    
T  27214421 agagaggtgacgaaatcacatcttcgctccacaagaaaattgaagactcgaggatttctgttattgtattctcagagaactatgctacttcttcattttg 27214520  T
Q  232 tttggacgaacttgaccacatca 254  Q
    |||||||||||||| ||||||||    
T  27214521 tttggacgaacttgtccacatca 27214543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 254
Target Start/End: Complemental strand, 27234907 - 27234685
Alignment:
Q  32 agttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttc 131  Q
    ||||| ||||| || |||||||| || ||||| ||||| |||||||| || ||||||  |||||| ||||||   ||||||||||||||||| |  ||||    
T  27234907 agtttcaggggtaccgacactcgacacggtttcaccggtaatctctataaagctctttgtgacaaaggaatccgaaccttcattgatgacaaggagcttc 27234808  T
Q  132 aaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttg 231  Q
    | |||||  | ||||||||| | || || | ||||   |||||||| || ||||||| | ||  ||| || ||    ||||||||  ||||||| |||||    
T  27234807 agagaggtgacgaaatcacatcttcgctccacaagaaaattgaagactcgaggatttctgttattgtattctcagagaactatgctacttcttcattttg 27234708  T
Q  232 tttggacgaacttgaccacatca 254  Q
    |||||||||||||| ||||||||    
T  27234707 tttggacgaacttgtccacatca 27234685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 27427917 - 27427816
Alignment:
Q  1 ttcctatgcattcacttaccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaaggga 100  Q
    |||||||||||||| |||| | || || |||| || || |||||| ||||||||| | ||||| ||||| |||||||  |||||||||| ||||||||||    
T  27427917 ttcctatgcattcagttacgatgtgttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctcttattgacaaggga 27427818  T
Q  101 at 102  Q
    ||    
T  27427817 at 27427816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 257
Target Start/End: Original strand, 2184912 - 2185027
Alignment:
Q  142 tgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaa 241  Q
    |||||| |||||||| ||| | || ||||||||||| || || ||||| || ||||| || || |   ||||||| |||||||| |||||||||||||||    
T  2184912 tgaaataacaccatcgcttgtgaaagccattgaagaatccagaattttcatccctgttttctcaaaggactatgcttcttcttcattttgtttggacgaa 2185011  T
Q  242 cttgaccacatcattc 257  Q
    |||| ||| |||||||    
T  2185012 cttgtccatatcattc 2185027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 257
Target Start/End: Complemental strand, 27427751 - 27427664
Alignment:
Q  170 attgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
    |||||||| || |||||||| |||||  | ||||||  ||||||||| |||||||| | ||||||||||  ||||| |||||||||||    
T  27427751 attgaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcatcttgtttggacacacttgtccacatcattc 27427664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 28481273 - 28481232
Alignment:
Q  136 aggaaatgaaatcacaccatcacttctcaaggccattgaaga 177  Q
    |||| ||||||||||||||||||||||||| || ||||||||    
T  28481273 aggagatgaaatcacaccatcacttctcaaagcaattgaaga 28481232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 29793697 - 29793656
Alignment:
Q  136 aggaaatgaaatcacaccatcacttctcaaggccattgaaga 177  Q
    |||| ||||||||||||||||||||||||| || ||||||||    
T  29793697 aggagatgaaatcacaccatcacttctcaaagcaattgaaga 29793656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 194; Significance: 1e-105; HSPs: 3)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 3736 - 3479
Alignment:
Q  1 ttcctatgcattcacttaccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaaggga 100  Q
    |||||||| ||||||||||||||| || || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3736 ttcctatggattcacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaaggga 3637  T
Q  101 atcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgt 200  Q
    ||| | ||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||    
T  3636 atccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgt 3537  T
Q  201 tttctatcaa-ctatgcctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||    
T  3536 tttctatcaacctatgcctcttcttcattttgtttggacgaacttgtccacatcattc 3479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 14669 - 14414
Alignment:
Q  1 ttcctatgcattcacttaccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaaggga 100  Q
    |||||||| ||||||||||||||| ||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14669 ttcctatggattcacttaccaagtgttcatcagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaaggga 14570  T
Q  101 atcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgt 200  Q
    ||| | ||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||    
T  14569 atccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgt 14470  T
Q  201 tttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||    
T  14469 tttctatcaactatgcct-ttcttcgttttgtttggacgaacttgtccacataattc 14414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 8106 - 8061
Alignment:
Q  10 attcacttaccaagtatttctcagttttaggggcactgacactcgg 55  Q
    ||||||||||||||| || |||||||||||||||||||||||||||    
T  8106 attcacttaccaagtgttcctcagttttaggggcactgacactcgg 8061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 181; Significance: 7e-98; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 4985 - 4729
Alignment:
Q  1 ttcctatgcattcacttaccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaaggga 100  Q
    |||||||| ||||||||||||||| || |||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  4985 ttcctatggattcacttaccaagtgttcctcagttttaggggcattgacactcgccacggttttaccggaaatctctacaaggctcttactgacaaggga 4886  T
Q  101 atcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgt 200  Q
    ||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||| || | |||||||||||| || ||||||||||||||||||||||    
T  4885 atcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatccctccgcaaggccattgatgaatctaggatttttattcctgtgt 4786  T
Q  201 tttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
    ||||||||  |||||||| |||||||||||||||||||||||||| |||||| ||||    
T  4785 tttctatcttctatgccttttcttcgttttgtttggacgaacttgtccacataattc 4729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 13946 - 13702
Alignment:
Q  1 ttcctatgcattcacttaccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaaggga 100  Q
    ||||| |||||||||||||||||| || |||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||    
T  13946 ttcctctgcattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaaggga 13847  T
Q  101 atcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgt 200  Q
    ||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||    
T  13846 atcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgt 13747  T
Q  201 tttctatcaactatgcctcttcttcgttttgtttggacgaacttg 245  Q
    ||||||||||||| ||| ||||    ||||| |||||||||||||    
T  13746 tttctatcaactacgccacttcaaaattttgcttggacgaacttg 13702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 165; Significance: 3e-88; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 5 - 245
Target Start/End: Original strand, 7402 - 7642
Alignment:
Q  5 tatgcattcacttaccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaagggaatca 104  Q
    |||||||||||||||||||| || || ||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||    
T  7402 tatgcattcacttaccaagtgttccttagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatca 7501  T
Q  105 acaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttc 204  Q
    | ||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||    
T  7502 aaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttc 7601  T
Q  205 tatcaactatgcctcttcttcgttttgtttggacgaacttg 245  Q
    ||||||||| ||| ||||    ||||| |||||||||||||    
T  7602 tatcaactacgccacttcaaaattttgcttggacgaacttg 7642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254 (Bit Score: 162; Significance: 2e-86; HSPs: 1)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 5 - 222
Target Start/End: Complemental strand, 227 - 10
Alignment:
Q  5 tatgcattcacttaccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaagggaatca 104  Q
    |||||||||||||||||||| || || ||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||    
T  227 tatgcattcacttaccaagtgttccttagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatca 128  T
Q  105 acaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttc 204  Q
    | ||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||    
T  127 aaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttc 28  T
Q  205 tatcaactatgcctcttc 222  Q
    ||||||||| ||| ||||    
T  27 tatcaactacgccacttc 10  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 133; Significance: 3e-69; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 18679868 - 18679612
Alignment:
Q  1 ttcctatgcattcacttaccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaaggga 100  Q
    |||||||  ||||||||||||||| || ||||| || ||||||| |||||||||  | |||||||| ||  ||||||||||||||||||||||||| |||    
T  18679868 ttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggtcatctctacaaggctcttactgacaaagga 18679769  T
Q  101 atcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgt 200  Q
    ||| |||||||||||||||||  ||  || ||||||||  ||||||||| |||||||||   ||| |||||||||||||||||||| || ||||||||||    
T  18679768 atccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatcttcattcctgtgt 18679669  T
Q  201 tttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  18679668 tttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattc 18679612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 18724386 - 18724132
Alignment:
Q  1 ttcctatgcattcacttaccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaaggga 100  Q
    |||||||  ||||||||||||||| || ||||| || ||||||| |||||||||  | |||||||| ||  |||||||||||||||||||||||||||||    
T  18724386 ttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggtcatctctacaaggctcttactgacaaggga 18724287  T
Q  101 atcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgt 200  Q
    ||| |||||||||||||||||  ||  || ||||||||  ||||||||| |||||||||   ||| |||||||||||||||||||| || ||||||||||    
T  18724286 atccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatcttcattcctgtgt 18724187  T
Q  201 tttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcat 255  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||    
T  18724186 tttctatcaactatgcctcttcttcattttgtttgaacgaacttgtccacatcat 18724132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 18699701 - 18699445
Alignment:
Q  1 ttcctatgcattcacttaccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaaggga 100  Q
    |||||||  ||||||||||||||| || ||||| || |||||||||||||||||  | |||||||| ||  |||||||||| ||||||||||||||||||    
T  18699701 ttcctatcgattcacttaccaagtgttcctcagcttcaggggcactgacactcgtgacggttttactggccatctctacaaagctcttactgacaaggga 18699602  T
Q  101 atcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgt 200  Q
    ||| |||||||||||||||||  ||  || ||||| ||  ||||||||| |||||||||   ||| |||||||||||||||||||| || ||||||||||    
T  18699601 atccacaccttcattgatgaccgtgacctgcaaagtggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatcttcattcctgtgt 18699502  T
Q  201 tttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
    ||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||    
T  18699501 tttctatcaactatgcctcttcttcattttgtttggacgaacttgttcacatcattc 18699445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 18731805 - 18731551
Alignment:
Q  1 ttcctatgcattcacttaccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaaggga 100  Q
    |||||||  ||||||||||||||| || ||||| || ||||||| |||||||||  | |||||||| ||  |||||||||  ||||||||||||||||||    
T  18731805 ttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtgacggttttactggccatctctacagagctcttactgacaaggga 18731706  T
Q  101 atcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgt 200  Q
    ||| |||||||||||||||||  ||  || ||||||||  ||||||||| |||||||||   ||| |||||||||||||||||||| || ||||||||||    
T  18731705 atccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatcttcattcctgtgt 18731606  T
Q  201 tttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcat 255  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  18731605 tttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcat 18731551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 18655778 - 18655522
Alignment:
Q  1 ttcctatgcattcacttaccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaaggga 100  Q
    |||||||  ||||||||||||||| || ||||| || ||||||| |||||||||  | |||||||| ||  |||||||||| ||||||||||||||||||    
T  18655778 ttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactgacaaggga 18655679  T
Q  101 atcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgt 200  Q
    ||| |||||||||||||||||  ||  || ||||| ||  ||||||||| |||||||||   ||| |||||| ||||||||||||| |||||||||||||    
T  18655678 atccacaccttcattgatgaccgtgagctgcaaagtggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgt 18655579  T
Q  201 tttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||    
T  18655578 tttctatcaactatgcctcttcttcattttgtttggacgaacttgtccgcatcattc 18655522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 26 - 245
Target Start/End: Complemental strand, 5091243 - 5091024
Alignment:
Q  26 tttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatg 125  Q
    ||||| |||||||| ||||| ||||||||  | |||||||| |||||||||||  | |||||   || |||||||||  ||||||||||||||||||  |    
T  5091243 tttcttagttttagaggcaccgacactcgttacggttttactggaaatctctatgaagctctacgtgtcaagggaattcacaccttcattgatgacagag 5091144  T
Q  126 gtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttc 225  Q
      |||||  ||||| |  |||| ||||| |||||||||||||||||| |||| |||| |||| | |||   || || |||| | ||||||| ||||||||    
T  5091143 agcttcagcgaggagaccaaataacaccgtcacttctcaaggccattcaagaatctaagattgtcattatcgttttctctaaccactatgcttcttcttc 5091044  T
Q  226 gttttgtttggacgaacttg 245  Q
    ||||||||| || |||||||    
T  5091043 gttttgtttagatgaacttg 5091024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 17989351 - 17989250
Alignment:
Q  1 ttcctatgcattcacttaccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaaggga 100  Q
    |||||||||||||| |||| | || || |||| || || |||||| ||||||||| | ||||| ||||| |||||||  |||||||||| ||||||||||    
T  17989351 ttcctatgcattcagttacgatgtgttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctcttattgacaaggga 17989252  T
Q  101 at 102  Q
    ||    
T  17989251 at 17989250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 18073638 - 18073739
Alignment:
Q  1 ttcctatgcattcacttaccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaaggga 100  Q
    |||||||||||||| |||| | || || |||| || || |||||| ||||||||| | ||||| ||||| |||||||  |||||||||| ||||||||||    
T  18073638 ttcctatgcattcagttacgatgtgttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctcttattgacaaggga 18073737  T
Q  101 at 102  Q
    ||    
T  18073738 at 18073739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 257
Target Start/End: Complemental strand, 17989185 - 17989098
Alignment:
Q  170 attgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
    |||||||| || |||||||| |||||  | ||||||  ||||||||| |||||||| | ||||||||||  ||||| |||||||||||    
T  17989185 attgaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcatcttgtttggacacacttgtccacatcattc 17989098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 257
Target Start/End: Original strand, 18073804 - 18073891
Alignment:
Q  170 attgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
    |||||||| || |||||||| |||||  | ||||||  ||||||||| |||||||| | ||||||||||  ||||| |||||||||||    
T  18073804 attgaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcatcttgtttggacacacttgtccacatcattc 18073891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 126; Significance: 5e-65; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 72 - 257
Target Start/End: Complemental strand, 268587 - 268402
Alignment:
Q  72 atctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccat 171  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||   ||  |||||||||||  ||||||||| |||||||||   ||| |||||    
T  268587 atctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggatgaaatcaaaccatcactcgacaatgccat 268488  T
Q  172 tgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  268487 tgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattc 268402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 28164663 - 28164407
Alignment:
Q  1 ttcctatgcattcacttaccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaaggga 100  Q
    |||||||| |||||| |||||||| || |||||||||||||||| |||||||||  | ||||| || ||  ||||||| ||||| |||   |||||||||    
T  28164663 ttcctatggattcacataccaagtgttcctcagttttaggggcagtgacactcgtgacggtttcactggccatctctataaggcccttgacgacaaggga 28164564  T
Q  101 atcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgt 200  Q
    ||  |||| |||||||||||   || |||| | |||||| | ||||||||||| ||| |  |||||||||||||| | ||| | ||||||||||||||||    
T  28164563 attcacacattcattgatgattgtgatcttgagagaggagaagaaatcacaccgtcattcatcaaggccattgaaaaatcttgaatttttattcctgtgt 28164464  T
Q  201 tttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
    | ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  28164463 tatctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattc 28164407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 28127981 - 28127724
Alignment:
Q  1 ttcctatgcattcacttaccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaaggga 100  Q
    |||||||| |||||| |||||||| || ||||| || ||||||| |||||||||  | ||||| || ||  ||||||||||||| |||  ||||||||||    
T  28127981 ttcctatggattcacataccaagtgttcctcagcttcaggggcagtgacactcgtgacggtttcactggccatctctacaaggccctttatgacaaggga 28127882  T
Q  101 atcaacaccttcattgatgacaatggtcttcaaagagga-aatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtg 199  Q
    ||| |||| |||||||||||   |  |||| | |||||| ||  |||||||||| |||||| | |||||||||||||| ||||| ||||||||||||||     
T  28127881 atccacacattcattgatgattgtaatcttgagagaggagaaaaaaatcacaccgtcacttttaaaggccattgaagaatctagaatttttattcctgta 28127782  T
Q  200 ttttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||  ||||||||||    
T  28127781 ttttctaccaactatgcctcttcttcattttgtttggacgaacttgtgcacatcattc 28127724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 113; Significance: 3e-57; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 5 - 257
Target Start/End: Complemental strand, 29274080 - 29273828
Alignment:
Q  5 tatgcattcacttaccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaagggaatca 104  Q
    |||| |||||||||||| || || ||||  ||||| |||  |||||||||  | |||||||  ||  ||||||||||| ||||||||||||||||||||     
T  29274080 tatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggttttattggccatctctacaagactcttactgacaagggaatcc 29273981  T
Q  105 acaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttc 204  Q
    ||||||||||||||||   ||  |||||||||||  ||||||||| | |||||||   ||| | ||||||||||||||| ||||||||||||||||||||    
T  29273980 acaccttcattgatgatcgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgtcattgaagagtctagaatttttattcctgtgttttc 29273881  T
Q  205 tatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  29273880 tatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattc 29273828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 47 - 187
Target Start/End: Original strand, 31903770 - 31903910
Alignment:
Q  47 gacactcggcatggttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaa 146  Q
    ||||||||  |||||||||| |||||||||||||| ||||||  ||| ||||||||| ||||||| ||||| ||  | |  |||||||||||| ||||||    
T  31903770 gacactcgctatggttttactggaaatctctacaaagctctttatgataagggaatccacacctttattgacgatgaagaacttcaaagaggacatgaaa 31903869  T
Q  147 tcacaccatcacttctcaaggccattgaagagtctaggatt 187  Q
    |||||||||||||| |  |||| ||||||||||||||||||    
T  31903870 tcacaccatcacttttagaggcaattgaagagtctaggatt 31903910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 110; Significance: 2e-55; HSPs: 4)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 32 - 257
Target Start/End: Original strand, 34629 - 34854
Alignment:
Q  32 agttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttc 131  Q
    |||||||| || | |||||||||  |||||||||||| ||||||||| |  ||||||  | ||||||||||| ||||||||||||||||||  |  ||||    
T  34629 agttttagaggtagtgacactcgctatggttttaccgaaaatctctatagagctctttgtcacaagggaatccacaccttcattgatgacagggagcttc 34728  T
Q  132 aaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttg 231  Q
    || ||||| ||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||| || |||||||| ||||| |||||||| |||||    
T  34729 aaggaggagatgaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttg 34828  T
Q  232 tttggacgaacttgaccacatcattc 257  Q
     ||||||||||||| |||||||||||    
T  34829 cttggacgaacttgtccacatcattc 34854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 32 - 257
Target Start/End: Original strand, 42870 - 43095
Alignment:
Q  32 agttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttc 131  Q
    |||||||| || | |||||||||  |||||||||| |||||||||||||| | ||||  | | ||||||||   |||||||||||||||||  |  ||||    
T  42870 agttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagaacttc 42969  T
Q  132 aaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttg 231  Q
     | ||||  |  |||| |||||||||||| |||||||||||||||||||||||||||| |||||||| || |||||||| ||||| |||||||| |||||    
T  42970 caggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttg 43069  T
Q  232 tttggacgaacttgaccacatcattc 257  Q
     ||||||||||||| |||||||||||    
T  43070 cttggacgaacttgtccacatcattc 43095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 32 - 257
Target Start/End: Original strand, 27352 - 27577
Alignment:
Q  32 agttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttc 131  Q
    |||||||| || | |||||||||  |||||||||| |||||||||||||  | ||||  | | ||||||||  |||| ||| ||||||| |  |  ||||    
T  27352 agttttagaggtattgacactcgttatggttttactggaaatctctacagtgatctttgtaagaagggaattcacacattctttgatgatagagagcttc 27451  T
Q  132 aaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttg 231  Q
    || ||||  ||||||| ||| |||||||| |||||| ||||||||| ||||||||||| |||||||| || |||||||| ||||| |||||||| |||||    
T  27452 aaggaggtgatgaaataacatcatcacttttcaaggtcattgaagaatctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttg 27551  T
Q  232 tttggacgaacttgaccacatcattc 257  Q
     ||||||||||||| |||||||||||    
T  27552 cttggacgaacttgtccacatcattc 27577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 32 - 257
Target Start/End: Original strand, 116700 - 116925
Alignment:
Q  32 agttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttc 131  Q
    |||||||| || | |||||||||  |||||||||| |||||||||||||| | ||||  |   ||| ||||    ||||||||||||||||| |  ||||    
T  116700 agttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaggaagagaattcgtaccttcattgatgacaaagaccttc 116799  T
Q  132 aaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttg 231  Q
    || ||||  | ||||| ||||| |||||| |||||||||||||||||||||||||||| |||||| | || |||||||| ||||| |||||||| |||||    
T  116800 aacgaggtgacgaaataacaccgtcacttttcaaggccattgaagagtctaggattttcattcctattttgtctatcaattatgcttcttcttccttttg 116899  T
Q  232 tttggacgaacttgaccacatcattc 257  Q
     ||||| ||||||| |||||| ||||    
T  116900 cttggatgaacttgtccacattattc 116925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 46 - 257
Target Start/End: Complemental strand, 58551 - 58340
Alignment:
Q  46 tgacactcggcatggttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaa 145  Q
    |||||||||  |||||||||| |||||||||||||  ||||||  |||||||||||||   |||||||| |||||||  |  |||||| ||||  | |||    
T  58551 tgacactcgctatggttttactggaaatctctacagagctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgacgaa 58452  T
Q  146 atcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttg 245  Q
    || |||||||||||| ||||||||||| |||||||||||||||| ||||| || || |||||||||||||| |||||||| ||||| ||| |||||||||    
T  58451 ataacaccatcacttttcaaggccattaaagagtctaggattttcattcccgtcttgtctatcaactatgcttcttcttcattttgcttgaacgaacttg 58352  T
Q  246 accacatcattc 257  Q
     |||||||||||    
T  58351 tccacatcattc 58340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 32 - 257
Target Start/End: Original strand, 3279592 - 3279817
Alignment:
Q  32 agttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttc 131  Q
    |||||||||||||||||||||||  |||||||||| ||||||||||| |  ||| | | ||||   ||| ||  ||||||||||||||| |  |  ||||    
T  3279592 agttttaggggcactgacactcgctatggttttactggaaatctctatagagctttaagtgacggtggattctgcaccttcattgatgatagggagcttc 3279691  T
Q  132 aaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttg 231  Q
    |  ||||  |||||||||||| ||||||| |||||||||| |||||||| | |||||||||||| || || |||||||||||||| ||||||   |||||    
T  3279692 atggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttctatattttg 3279791  T
Q  232 tttggacgaacttgaccacatcattc 257  Q
    |||||||||||||| |||||||||||    
T  3279792 tttggacgaacttgtccacatcattc 3279817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 257
Target Start/End: Complemental strand, 17993967 - 17993742
Alignment:
Q  32 agttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttc 131  Q
    ||||| ||||| || || |||||  ||||||| ||||| |||||||| || |||||| |||||||||||||    |||||||| |||||||| |  ||||    
T  17993967 agtttcaggggtaccgatactcgatatggtttcaccggtaatctctataaagctctttctgacaagggaattcgaaccttcatcgatgacaaagagcttc 17993868  T
Q  132 aaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttg 231  Q
    | |||||  ||||||||||||| || || ||||||  ||||||||| || || |||   |||   || || || |   ||||||| |||||||| |||||    
T  17993867 agagaggtgatgaaatcacaccgtcgctcctcaagagcattgaagactcaagaattgcgattatcgtcttctcaaaggactatgcttcttcttcattttg 17993768  T
Q  232 tttggacgaacttgaccacatcattc 257  Q
    ||| |||||||||| |||||||||||    
T  17993767 tttagacgaacttgtccacatcattc 17993742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 109 - 256
Target Start/End: Original strand, 16688992 - 16689139
Alignment:
Q  109 cttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatc 208  Q
    ||||||||||||||| |  ||||| |||||  |  ||||||||||||||||| ||||||| |||||||| || ||||||   || || ||||||||||      
T  16688992 cttcattgatgacaaggaacttcagagaggtgacaaaatcacaccatcacttatcaaggcaattgaagactcaaggattgcaatccccgtgttttctaag 16689091  T
Q  209 aactatgcctcttcttcgttttgtttggacgaacttgaccacatcatt 256  Q
    |||||||| | ||| |||||||||||||| ||||||| | ||||||||    
T  16689092 aactatgcattttcctcgttttgtttggatgaacttgtcaacatcatt 16689139  T

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Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 59446 - 59547
Alignment:
Q  1 ttcctatgcattcacttaccaagtatttctcagttttaggggcactgacactcggcatggttttaccggaaatctctacaaggctcttactgacaaggga 100  Q
    |||||||||||||| |||| | || || |||| || || |||||| ||||||||| | ||||| ||||| |||||||  |||||||||| ||||||||||    
T  59446 ttcctatgcattcagttacgatgtgttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctcttattgacaaggga 59545  T
Q  101 at 102  Q
    ||    
T  59546 at 59547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 257
Target Start/End: Original strand, 59612 - 59699
Alignment:
Q  170 attgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattc 257  Q
    |||||||| || |||||||| |||||  | ||||||  ||||||||| |||||||| | ||||||||||  ||||| |||||||||||    
T  59612 attgaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcatcttgtttggacacacttgtccacatcattc 59699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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