View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21326_high_26 (Length: 258)
Name: NF21326_high_26
Description: NF21326
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21326_high_26 |
 | |
|
| [»] scaffold0294 (1 HSPs) |
| | |
|
| [»] scaffold0813 (1 HSPs) |
| | |
|
| [»] scaffold0286 (1 HSPs) |
| | |
|
| [»] scaffold0552 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 196; Significance: 1e-107; HSPs: 17)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 4344502 - 4344741
Alignment:
| Q |
1 |
tgtccgaggctgtctgaggtttcccaaagtattggacatctcaagaaaattcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaa |
100 |
Q |
| |
|
||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| || ||||||||||||||||||| |
|
|
| T |
4344502 |
tgtccaaggctgtctgagatttcccaaagtattggacatctcaacaaaattcttttgataaatttgaaaaattgtattagcctttgtaaccttccaagaa |
4344601 |
T |
|
| Q |
101 |
acatctatacgttgaaatctctgaaaactctcattctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccac |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
4344602 |
acatctatacgttgaaatctctgaaaactctcattctatctggatgtttaatgattgacaagttggaagaggacttggaacaaatggaatctttaaccac |
4344701 |
T |
|
| Q |
201 |
tctgattgcaaatgacactggtataacaaaagtgcccttt |
240 |
Q |
| |
|
||||||||||||| |||||| |||||||||||| |||||| |
|
|
| T |
4344702 |
tctgattgcaaataacactgctataacaaaagtacccttt |
4344741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 4360933 - 4361172
Alignment:
| Q |
1 |
tgtccgaggctgtctgaggtttcccaaagtattggacatctcaagaaaattcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaa |
100 |
Q |
| |
|
||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||| |
|
|
| T |
4360933 |
tgtccaaggctgtctgagatttcccaaagtattggacatctcaagaaaattcttttgataaatttgaaagattgcattagcctttgtaaccttccaagaa |
4361032 |
T |
|
| Q |
101 |
acatctatacgttgaaatctctgaaaactctcattctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccac |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
4361033 |
acatctatacgttgaaatctctgaaaactctcattctatctggatgttcaatgattgacacgttggaagaggacttggaacaaatggaatctttaaccac |
4361132 |
T |
|
| Q |
201 |
tctgattgcaaatgacactggtataacaaaagtgcccttt |
240 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| |||||| |
|
|
| T |
4361133 |
tctgattgcaaataacactggtataacaaaagtacccttt |
4361172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 4335201 - 4335440
Alignment:
| Q |
1 |
tgtccgaggctgtctgaggtttcccaaagtattggacatctcaagaaaattcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaa |
100 |
Q |
| |
|
|||||||||||||||||||| ||||| | ||||||||||| |||||| ||||||||||||||||||||||||| || || ||||||||||||||||||| |
|
|
| T |
4335201 |
tgtccgaggctgtctgaggtatcccatacaattggacatcttaagaaagttcttttgataaatttgaaagattgcattagcctttgtaaccttccaagaa |
4335300 |
T |
|
| Q |
101 |
acatctatacgttgaaatctctgaaaactctcattctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccac |
200 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
4335301 |
acatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggacttggaacaaatggaatctttaaccac |
4335400 |
T |
|
| Q |
201 |
tctgattgcaaatgacactggtataacaaaagtgcccttt |
240 |
Q |
| |
|
||| || ||| || |||||||||||||||||||||||||| |
|
|
| T |
4335401 |
tctcatggcagataacactggtataacaaaagtgcccttt |
4335440 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 7 - 240
Target Start/End: Complemental strand, 4320838 - 4320605
Alignment:
| Q |
7 |
aggctgtctgaggtttcccaaagtattggacatctcaagaaaattcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaaacatct |
106 |
Q |
| |
|
||||||||| |||||||||| || |||||||||||||| ||| || ||||||||||||||||||||||||| || ||||||| ||||||||||||||||| |
|
|
| T |
4320838 |
aggctgtctcaggtttcccatagcattggacatctcaaaaaagttgttttgataaatttgaaagattgtattagcctttgtagccttccaagaaacatct |
4320739 |
T |
|
| Q |
107 |
atacgttgaaatctctgaaaactctcattctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccactctgat |
206 |
Q |
| |
|
||||||||||| ||||||| |||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
4320738 |
atacgttgaaaactctgaatactctcattctatcgggatgtttaatgattgacaagttggaagaggacttggaacaaatggaatctttaaccaccctgat |
4320639 |
T |
|
| Q |
207 |
tgcaaatgacactggtataacaaaagtgcccttt |
240 |
Q |
| |
|
||||||| | ||||||||||||||||| |||||| |
|
|
| T |
4320638 |
tgcaaataatactggtataacaaaagttcccttt |
4320605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 4124164 - 4123925
Alignment:
| Q |
1 |
tgtccgaggctgtctgaggtttcccaaagtattggacatctcaagaaaattcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaa |
100 |
Q |
| |
|
||||| |||||||||||||| ||||| | ||||||||||| |||||| ||||||||||||||||||||||||||| || |||| |||||||||||||| |
|
|
| T |
4124164 |
tgtccaaggctgtctgaggtatcccatacaattggacatcttaagaaagttcttttgataaatttgaaagattgtactagcctttctaaccttccaagaa |
4124065 |
T |
|
| Q |
101 |
acatctatacgttgaaatctctgaaaactctcattctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccac |
200 |
Q |
| |
|
|||| ||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||| |
|
|
| T |
4124064 |
acatttattcgttgaaatctctgaaaactctcattctatcgggatgtttaatgattgacaagttggaagaggagttggaacaaatggaatctttaaccac |
4123965 |
T |
|
| Q |
201 |
tctgattgcaaatgacactggtataacaaaagtgcccttt |
240 |
Q |
| |
|
||||||||||||| | |||| ||||||||||||||||||| |
|
|
| T |
4123964 |
tctgattgcaaataatactgctataacaaaagtgcccttt |
4123925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 4133648 - 4133411
Alignment:
| Q |
1 |
tgtccgaggctgtctgaggtttcccaaagtattggacatctcaagaaaattcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaa |
100 |
Q |
| |
|
||||| |||||||||||||||||||| | ||||| |||||| | ||| |||| | |||||||||||||| |||| || ||| ||||||||||||||| |
|
|
| T |
4133648 |
tgtccaaggctgtctgaggtttcccataccattggtcatctccataaagttctcattataaatttgaaagactgtactagccttcgtaaccttccaagaa |
4133549 |
T |
|
| Q |
101 |
acatctatacgttgaaatctctgaaaactctcattctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccac |
200 |
Q |
| |
|
||||||| |||||||||||||||||||||| ||||| ||||| ||||||| |||||||| || || ||||||||||||||||||| ||||||||||| |
|
|
| T |
4133548 |
ccatctattcgttgaaatctctgaaaactcttattctttctggctgtttaattattgacaaattgga--aggacttggaacaaatggagtctttaaccac |
4133451 |
T |
|
| Q |
201 |
tctgattgcaaatgacactggtataacaaaagtgcccttt |
240 |
Q |
| |
|
|||||||| || |||||| |||||||||||||||||| |
|
|
| T |
4133450 |
tctgattgtggataacactgcaataacaaaagtgcccttt |
4133411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 34 - 241
Target Start/End: Complemental strand, 7885583 - 7885376
Alignment:
| Q |
34 |
ggacatctcaagaaaattcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaaacatctatacgttgaaatctctgaaaactctca |
133 |
Q |
| |
|
||||||||||| || |||||||| ||||||||||||||||||| | ||| | | |||||||| | ||| |||| ||| | || |||||||| |||| |
|
|
| T |
7885583 |
ggacatctcaaaaagattcttttaataaatttgaaagattgtacaggccttcgagaacttccaaggagcatatataagttagactcgctgaaaacactca |
7885484 |
T |
|
| Q |
134 |
ttctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccactctgattgcaaatgacactggtataacaaaagt |
233 |
Q |
| |
|
|||| ||||||||| ||| |||||||||||||||||||| | ||||||||| ||||||||||||| || |||| ||||||||| ||| |||| ||| |
|
|
| T |
7885483 |
ttctgtctggatgtacaaaaattgacaagttagaagaggatatagaacaaatgaaatctttaaccaccttggttgcggatgacactgctatcacaagagt |
7885384 |
T |
|
| Q |
234 |
gccctttg |
241 |
Q |
| |
|
|||||||| |
|
|
| T |
7885383 |
gccctttg |
7885376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 240
Target Start/End: Complemental strand, 6621675 - 6621493
Alignment:
| Q |
58 |
ataaatttgaaagattgtatcagtctttgtaaccttccaagaaacatctatacgttgaaatctctgaaaactctcattctatctggatgtttaaagattg |
157 |
Q |
| |
|
|||||||||| ||| || || ||||| |||| |||||||||| |||||||| || |||||||| ||||| | ||||| || ||||||| | ||||| |
|
|
| T |
6621675 |
ataaatttgacagactgcatacgtcttcgtaaacttccaagaagcatctataaattaaaatctctagaaactttaattctttcaggatgttccatgattg |
6621576 |
T |
|
| Q |
158 |
acaagttagaagaggacttggaacaaatggaatctttaaccactctgattgcaaatgacactggtataacaaaagtgcccttt |
240 |
Q |
| |
|
|||| || || |||||||||||||| |||||||| || || || ||||||| || | |||| |||||||||||| |||||| |
|
|
| T |
6621575 |
acaaattggaggaggacttggaacagatggaatcattgacaaccttgattgcggataagactgctataacaaaagttcccttt |
6621493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 240
Target Start/End: Complemental strand, 6498664 - 6498512
Alignment:
| Q |
88 |
aaccttccaagaaacatctatacgttgaaatctctgaaaactctcattctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatgg |
187 |
Q |
| |
|
|||||||| |||| |||||||| || |||||||| ||||| | ||||| |||||||||| ||||||||||| || || |||||| ||||||| |||| |
|
|
| T |
6498664 |
aaccttccgagaagcatctataaattaaaatctctagaaactttgattctttctggatgttccaagattgacaaattggaggaggacgtggaacagatgg |
6498565 |
T |
|
| Q |
188 |
aatctttaaccactctgattgcaaatgacactggtataacaaaagtgcccttt |
240 |
Q |
| |
|
|||| || || || ||||||| || | |||| |||||||||||| |||||| |
|
|
| T |
6498564 |
aatcattgacaaccttgattgcggataagactgctataacaaaagttcccttt |
6498512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 236
Target Start/End: Original strand, 6728307 - 6728497
Alignment:
| Q |
46 |
aaaattcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaaacatctatacgttgaaatctctgaaaactctcattctatctggat |
145 |
Q |
| |
|
||||||||| |||||||||||| ||| || ||||| | || ||||||||||||||||| | ||| |||||||| ||||| | ||||| || |||| |
|
|
| T |
6728307 |
aaaattcttctgataaatttgagagactgcgcaggtcttcggaaacttccaagaaacatctacaagttaaaatctctagaaactttgattctttcaggat |
6728406 |
T |
|
| Q |
146 |
gtttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccactctgattgcaaatgacactggtataacaaaagtgcc |
236 |
Q |
| |
|
||| | ||||||||| || || |||||| ||||||| |||||||| || || || ||||||| || | |||| ||||||||||||||| |
|
|
| T |
6728407 |
gttccatgattgacaaattggaggaggacgtggaacagatggaatcattgacaaccttgattgcggataagactgctataacaaaagtgcc |
6728497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 236
Target Start/End: Original strand, 6796688 - 6796878
Alignment:
| Q |
46 |
aaaattcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaaacatctatacgttgaaatctctgaaaactctcattctatctggat |
145 |
Q |
| |
|
||||||||| | |||||||||| ||| || || ||||| | || |||||||||| ||||||||| || |||||||| ||||| | ||||| ||||||| |
|
|
| T |
6796688 |
aaaattcttctcataaatttgacagactgcataggtcttcggaaacttccaagaagcatctatacattaaaatctctagaaactttgattctttctggat |
6796787 |
T |
|
| Q |
146 |
gtttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccactctgattgcaaatgacactggtataacaaaagtgcc |
236 |
Q |
| |
|
|| | |||||| || || || |||||||||||||| |||||||| || | ||| |||||||| || | ||| ||| ||||||||||| |
|
|
| T |
6796788 |
gtaccatgattgaaaaattggaggaggacttggaacagatggaatcattgattactttgattgcagataagacttctatcacaaaagtgcc |
6796878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 236
Target Start/End: Original strand, 6651037 - 6651158
Alignment:
| Q |
115 |
aaatctctgaaaactctcattctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccactctgattgcaaatg |
214 |
Q |
| |
|
|||||||| ||||| | ||||| |||||||||| ||||||||||| || || |||||||||||||| |||||||| || | || ||||||| || |
|
|
| T |
6651037 |
aaatctctagaaactttgattctttctggatgttccaagattgacaaattggaggaggacttggaacagatggaatcattgaaaaccttgattgcggata |
6651136 |
T |
|
| Q |
215 |
acactggtataacaaaagtgcc |
236 |
Q |
| |
|
| |||| ||||||||||||||| |
|
|
| T |
6651137 |
agactgctataacaaaagtgcc |
6651158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 240
Target Start/End: Original strand, 6752930 - 6753055
Alignment:
| Q |
115 |
aaatctctgaaaactctcattctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccactctgattgcaaatg |
214 |
Q |
| |
|
|||||||| ||||| | ||||| |||||||||| | ||||||||| || || |||||||||||||| |||||||| || | || ||||||| || |
|
|
| T |
6752930 |
aaatctctagaaactttgattctttctggatgttccatgattgacaaattggaggaggacttggaacagatggaatcattgattaccttgattgcggata |
6753029 |
T |
|
| Q |
215 |
acactggtataacaaaagtgcccttt |
240 |
Q |
| |
|
| |||| ||||||||||||||||||| |
|
|
| T |
6753030 |
agactgctataacaaaagtgcccttt |
6753055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 191
Target Start/End: Original strand, 6758629 - 6758770
Alignment:
| Q |
50 |
ttcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaaacatctatacgttgaaatctctgaaaactctcattctatctggatgttt |
149 |
Q |
| |
|
||||| |||||||||||| ||| || || ||||| | || ||||| |||| |||||| || || |||||||| ||||| | ||||| || ||||| | |
|
|
| T |
6758629 |
ttcttctgataaatttgacagactgcataggtcttaggaaacttccgagaagcatctaaacattaaaatctctagaaactttgattctctcaggatgcat |
6758728 |
T |
|
| Q |
150 |
aaagattgacaagttagaagaggacttggaacaaatggaatc |
191 |
Q |
| |
|
||||||||||| || || |||||||||||||| |||||||| |
|
|
| T |
6758729 |
caagattgacaaattggaggaggacttggaacagatggaatc |
6758770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 194
Target Start/End: Original strand, 6815371 - 6815519
Alignment:
| Q |
46 |
aaaattcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaaacatctatacgttgaaatctctgaaaactctcattctatctggat |
145 |
Q |
| |
|
||||||||| | |||||||||| ||| || | ||||| | || |||||||||| || ||||| || |||||||| ||||| | ||||| ||||||| |
|
|
| T |
6815371 |
aaaattcttctcataaatttgacagactgcacaggtcttcggaaacttccaagaagcaactataaattaaaatctctagaaactttgattctttctggat |
6815470 |
T |
|
| Q |
146 |
gtttaaagattgacaagttagaagaggacttggaacaaatggaatcttt |
194 |
Q |
| |
|
||| | |||||| || || || |||||||||||||| ||||||||||| |
|
|
| T |
6815471 |
gttccatgattgaaaaattggaggaggacttggaacagatggaatcttt |
6815519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 240
Target Start/End: Complemental strand, 6545572 - 6545434
Alignment:
| Q |
102 |
catctatacgttgaaatctctgaaaactctcattctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccact |
201 |
Q |
| |
|
|||||||| || |||||||| ||||| | ||||| || ||||||| |||||| |||| || || |||||||||||||| |||||||| || | || |
|
|
| T |
6545572 |
catctataaattaaaatctctagaaactttgattctttcgggatgttccaagattaacaaattggaggaggacttggaacagatggaatcgttgaaaacc |
6545473 |
T |
|
| Q |
202 |
ctgattgcaaatgacactggtataacaaaagtgcccttt |
240 |
Q |
| |
|
||||||| || | |||| ||||||||||||||||||| |
|
|
| T |
6545472 |
ttgattgcggataagactgctataacaaaagtgcccttt |
6545434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 191
Target Start/End: Original strand, 6675673 - 6675749
Alignment:
| Q |
115 |
aaatctctgaaaactctcattctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaatc |
191 |
Q |
| |
|
|||||||| ||||| | ||||| |||||||||| ||||||||||| || || |||||| ||||||| |||||||| |
|
|
| T |
6675673 |
aaatctctagaaactttgattctttctggatgttccaagattgacaaattggaggaggacgtggaacagatggaatc |
6675749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 138; Significance: 3e-72; HSPs: 26)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 15 - 240
Target Start/End: Complemental strand, 5690370 - 5690145
Alignment:
| Q |
15 |
tgaggtttcccaaagtattggacatctcaagaaaattcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaaacatctatacgttg |
114 |
Q |
| |
|
|||||||||||| || |||||||||||| | ||||||||| ||||||||||| |||||||||| || |||| |||||||||||||| |||||||| |||| |
|
|
| T |
5690370 |
tgaggtttcccatagcattggacatctcgacaaaattcttctgataaatttggaagattgtattagcctttctaaccttccaagaagcatctataagttg |
5690271 |
T |
|
| Q |
115 |
aaatctctgaaaactctcattctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccactctgattgcaaatg |
214 |
Q |
| |
|
||||||||||||||||||||||| || || |||| || |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
5690270 |
aaatctctgaaaactctcattctttccgggtgttcaatgattaacaagttggaagaggacttggaacaaatggaatctttaaccactctgcttgcaaatg |
5690171 |
T |
|
| Q |
215 |
acactggtataacaaaagtgcccttt |
240 |
Q |
| |
|
||||||| ||||||| ||||||||| |
|
|
| T |
5690170 |
acactggaataacaagtgtgcccttt |
5690145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 11 - 240
Target Start/End: Original strand, 5447453 - 5447682
Alignment:
| Q |
11 |
tgtctgaggtttcccaaagtattggacatctcaagaaaattcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaaacatctatac |
110 |
Q |
| |
|
||||||||||||| | || |||||||||||||| ||||||||| ||||||||||| |||||||||| | || ||||||| ||||||| |||||||| |
|
|
| T |
5447453 |
tgtctgaggtttctcctagcattggacatctcaataaaattcttctgataaatttggaagattgtattggcctaggtaacctcccaagaagcatctataa |
5447552 |
T |
|
| Q |
111 |
gttgaaatctctgaaaactctcattctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccactctgattgca |
210 |
Q |
| |
|
|||||||||| |||||||||||||||| ||||| |||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
5447553 |
gttgaaatctttgaaaactctcattctttctggttgtttaaagattgacaagctggaagaggacttggaacagatggaatctttaaccactctgcttgca |
5447652 |
T |
|
| Q |
211 |
aatgacactggtataacaaaagtgcccttt |
240 |
Q |
| |
|
||| | ||| ||||||| |||||||||| |
|
|
| T |
5447653 |
aataatacttcaataacaacagtgcccttt |
5447682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 5182152 - 5181917
Alignment:
| Q |
1 |
tgtccgaggctgtctgaggtttcccaaagtattggacatctcaagaaaattcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaa |
100 |
Q |
| |
|
||||||| | ||||||| |||||||||||||||||| ||||||| ||||| ||||||||||||||| ||||||| || || ||| | ||||||||||| |
|
|
| T |
5182152 |
tgtccgaagttgtctgaagtttcccaaagtattggagatctcaataaaatacttttgataaatttggaagattgcattagccttcaaagccttccaagaa |
5182053 |
T |
|
| Q |
101 |
acatctatacgttgaaatctctgaaaactctcattctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccac |
200 |
Q |
| |
|
|||||||| |||||||| | || ||||||||||| ||||| ||||||| |||||||||||| |||||||| |||||||||||| ||||||||||||| |
|
|
| T |
5182052 |
gcatctataatttgaaatcattaaacactctcattctttctgggtgtttaatgattgacaagttggaagaggatttggaacaaatgaaatctttaaccac |
5181953 |
T |
|
| Q |
201 |
tctgattgcaaatgacactggtataacaaaagtgcc |
236 |
Q |
| |
|
||||||||||| |||||| ||||||| |||||| |
|
|
| T |
5181952 |
attgattgcaaataacactgcaataacaagagtgcc |
5181917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 34 - 220
Target Start/End: Complemental strand, 5128609 - 5128423
Alignment:
| Q |
34 |
ggacatctcaagaaaattcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaaacatctatacgttgaaatctctgaaaactctca |
133 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||| ||||||| || || || |||| ||| ||||||| |||||||| |||||||||| |||||||||||| |
|
|
| T |
5128609 |
ggacatctcaataaaattcttctgataaatttggaagattgcattagcctatgtagcctcccaagaagcatctataagttgaaatctttgaaaactctca |
5128510 |
T |
|
| Q |
134 |
ttctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccactctgattgcaaatgacactg |
220 |
Q |
| |
|
|||| ||||| ||| ||| |||||||||||| |||||||||||||||||||||||||| ||||| |||||| |||||||| |||||| |
|
|
| T |
5128509 |
ttctttctggttgtataatgattgacaagttggaagaggacttggaacaaatggaatcattaacaactctgcttgcaaataacactg |
5128423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 31 - 240
Target Start/End: Original strand, 5344747 - 5344956
Alignment:
| Q |
31 |
attggacatctcaagaaaattcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaaacatctatacgttgaaatctctgaaaactc |
130 |
Q |
| |
|
|||||| ||||||||||||||||| | || |||||| |||| ||||| || || |||| ||| ||||||| |||||||| |||||| ||||| ||||||| |
|
|
| T |
5344747 |
attggagatctcaagaaaattcttctcattaatttggaagactgtattagcctatgtagcctgccaagaagcatctataagttgaattctctaaaaactc |
5344846 |
T |
|
| Q |
131 |
tcattctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccactctgattgcaaatgacactggtataacaaa |
230 |
Q |
| |
|
||||||| || || |||||||||||||||||||| ||||||||||| ||||||||| |||||||||||| |||||| |||||| |||||| |||||||| |
|
|
| T |
5344847 |
tcattctttcgggttgtttaaagattgacaagttggaagaggacttagaacaaatgaaatctttaaccattctgatcgcaaataacactgcaataacaaa |
5344946 |
T |
|
| Q |
231 |
agtgcccttt |
240 |
Q |
| |
|
||| |||||| |
|
|
| T |
5344947 |
agttcccttt |
5344956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 15 - 239
Target Start/End: Original strand, 5176609 - 5176833
Alignment:
| Q |
15 |
tgaggtttcccaaagtattggacatctcaagaaaattcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaaacatctatacgttg |
114 |
Q |
| |
|
|||||||||||| || |||||||||||| | ||||||||| ||||||| ||| |||||||||| || ||| | |||||||||| ||||||| |||| |
|
|
| T |
5176609 |
tgaggtttcccatagcattggacatctcgataaaattcttctgataaacttggaagattgtattagccttcagagtcttccaagaagtatctataagttg |
5176708 |
T |
|
| Q |
115 |
aaatctctgaaaactctcattctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccactctgattgcaaatg |
214 |
Q |
| |
|
|||||| ||||||| |||||||| ||||| |||| | |||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
5176709 |
aaatctttgaaaacactcattctttctgggtgttcgatgattgacaagttggaagaggacttggaacaaatggaatctttaactactctgcttgcaaata |
5176808 |
T |
|
| Q |
215 |
acactggtataacaaaagtgccctt |
239 |
Q |
| |
|
|||||| ||||||| ||||||||| |
|
|
| T |
5176809 |
acactgcaataacaagagtgccctt |
5176833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 5074133 - 5073894
Alignment:
| Q |
1 |
tgtccgaggctgtctgaggtttcccaaagtattggacatctcaagaaaattcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaa |
100 |
Q |
| |
|
||||| ||| |||| |||||||| || ||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||| | ||||||||||| |
|
|
| T |
5074133 |
tgtccaaggttgtcagaggtttctcatagtattgaacatctcaataaaattcttctgataaatttggaagattgtattggtcttcagagccttccaagaa |
5074034 |
T |
|
| Q |
101 |
acatctatacgttgaaatctctgaaaactctcattctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccac |
200 |
Q |
| |
|
||||||| |||||||||||| |||||||||||||| || || |||| || |||||||||||| ||||||||||| ||||| ||| |||||||||||| |
|
|
| T |
5074033 |
gtatctataagttgaaatctctaaaaactctcattctttccgggtgttcaatgattgacaagttggaagaggacttagaacagatgacatctttaaccac |
5073934 |
T |
|
| Q |
201 |
tctgattgcaaatgacactggtataacaaaagtgcccttt |
240 |
Q |
| |
|
|||||| |||||| |||| | ||||||| |||||||||| |
|
|
| T |
5073933 |
tctgatagcaaataacaccgcaataacaagagtgcccttt |
5073894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 13 - 239
Target Start/End: Complemental strand, 5354827 - 5354601
Alignment:
| Q |
13 |
tctgaggtttcccaaagtattggacatctcaagaaaattcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaaacatctatacgt |
112 |
Q |
| |
|
||||| ||||| | ||| |||||||||||||| ||||||||| |||||||||| ||||| || || | |||| || ||| ||||||| |||||| | || |
|
|
| T |
5354827 |
tctgaagtttctccaagcattggacatctcaataaaattcttctgataaatttcaaagactgcattaacctttctagcctcccaagaagcatctacaagt |
5354728 |
T |
|
| Q |
113 |
tgaaatctctgaaaactctcattctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccactctgattgcaaa |
212 |
Q |
| |
|
|||||||| |||||||||||||||| ||||| ||| |||| | |||||||| |||||||||||||||||| |||||||||||||||| ||| ||||||| |
|
|
| T |
5354727 |
tgaaatctttgaaaactctcattctttctggttgtaaaaagttagacaagttggaagaggacttggaacaattggaatctttaaccaccctgcttgcaaa |
5354628 |
T |
|
| Q |
213 |
tgacactggtataacaaaagtgccctt |
239 |
Q |
| |
|
|||||||| ||||||| ||| ||||| |
|
|
| T |
5354627 |
tgacactgcaataacaagagtaccctt |
5354601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 31 - 220
Target Start/End: Original strand, 5433921 - 5434110
Alignment:
| Q |
31 |
attggacatctcaagaaaattcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaaacatctatacgttgaaatctctgaaaactc |
130 |
Q |
| |
|
||||| |||||||| |||||||| ||||||||||| |||||||||| | || |||||||| ||||||| ||| |||| |||||||||| ||||||||| |
|
|
| T |
5433921 |
attggccatctcaatgaaattcttctgataaatttggaagattgtattggcctatgtaacctcccaagaagcatatataagttgaaatctttgaaaactc |
5434020 |
T |
|
| Q |
131 |
tcattctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccactctgattgcaaatgacactg |
220 |
Q |
| |
|
|||| || |||| ||||||||||||||||| || ||||| ||||||||||| ||||||||||||||||||||| |||||||| |||||| |
|
|
| T |
5434021 |
tcatccttactggctgtttaaagattgacaatttggaagatgacttggaacatatggaatctttaaccactctgcttgcaaataacactg |
5434110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 15 - 239
Target Start/End: Original strand, 5278436 - 5278660
Alignment:
| Q |
15 |
tgaggtttcccaaagtattggacatctcaagaaaattcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaaacatctatacgttg |
114 |
Q |
| |
|
||||||||| || || |||||| ||||| | ||||||||| ||||||| ||| |||||||||| || ||| | |||||||||| ||||||| |||| |
|
|
| T |
5278436 |
tgaggtttctcatagcattggatatctcgataaaattcttctgataaacttggaagattgtattagccttcagagtcttccaagaagtatctataagttg |
5278535 |
T |
|
| Q |
115 |
aaatctctgaaaactctcattctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccactctgattgcaaatg |
214 |
Q |
| |
|
|||||| ||||||| |||||||| ||||| |||| | |||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
5278536 |
aaatctttgaaaacactcattctttctgggtgttcgatgattgacaagttggaagaggacttggaacaaatggaatctttaactactctgcttgcaaata |
5278635 |
T |
|
| Q |
215 |
acactggtataacaaaagtgccctt |
239 |
Q |
| |
|
|||||| ||||||| ||||||||| |
|
|
| T |
5278636 |
acactgcaataacaagagtgccctt |
5278660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 5383182 - 5383410
Alignment:
| Q |
1 |
tgtccgaggctgtctgaggtttcccaaagtattggacatctcaagaaaattcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaa |
100 |
Q |
| |
|
||||||||| |||| |||||||| | || |||||| ||||||||||||||||| |||| |||||| |||| ||| | || || |||| ||| ||||||| |
|
|
| T |
5383182 |
tgtccgaggttgtccgaggtttctcctagcattggagatctcaagaaaattcttctgattaatttggaagactgtgttagcctatgtagcctcccaagaa |
5383281 |
T |
|
| Q |
101 |
acatctatacgttgaaatctctgaaaactctcattctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccac |
200 |
Q |
| |
|
||| |||| ||||||||||||||||||||||||||| ||||| |||||||||||| |||||| ||||||||| | |||||||||||||||||||| || |
|
|
| T |
5383282 |
gcatttataagttgaaatctctgaaaactctcattctttctggttgtttaaagattaccaagttggaagaggacatagaacaaatggaatctttaactac |
5383381 |
T |
|
| Q |
201 |
tctgattgcaaatgacactggtataacaa |
229 |
Q |
| |
|
| || ||||| || |||||| ||||||| |
|
|
| T |
5383382 |
tttgcttgcagataacactgcaataacaa |
5383410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 47 - 210
Target Start/End: Complemental strand, 5066873 - 5066710
Alignment:
| Q |
47 |
aaattcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaaacatctatacgttgaaatctctgaaaactctcattctatctggatg |
146 |
Q |
| |
|
|||||||| | ||| ||||| |||||||| | || ||| ||||||||||||||| |||||||| |||||||||||| |||||||||||||| ||||| || |
|
|
| T |
5066873 |
aaattcttctaatagatttggaagattgtgttagccttcgtaaccttccaagaagcatctataagttgaaatctcttaaaactctcattctttctgggtg |
5066774 |
T |
|
| Q |
147 |
tttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccactctgattgca |
210 |
Q |
| |
|
| ||| |||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||| |
|
|
| T |
5066773 |
tataatgattgacaagttagaagaggacatagaacaaatggaatctttaaccactctgcttgca |
5066710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 31 - 236
Target Start/End: Complemental strand, 5257529 - 5257324
Alignment:
| Q |
31 |
attggacatctcaagaaaattcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaaacatctatacgttgaaatctctgaaaactc |
130 |
Q |
| |
|
|||||| |||||||||||||| |||||||||||||| |||||||||| || | || | || ||||||| |||||||| |||||||||||| |||||| |
|
|
| T |
5257529 |
attggaaatctcaagaaaattgttttgataaatttggaagattgtattagcttatgcgaactcccaagaagcatctataagttgaaatctctaaaaactt |
5257430 |
T |
|
| Q |
131 |
tcattctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccactctgattgcaaatgacactggtataacaaa |
230 |
Q |
| |
|
||||||| ||||| |||| || |||||||||||| ||||||||||| ||||| ||| ||||||||||||||| ||||||||| |||||| ||||||| |
|
|
| T |
5257429 |
tcattctttctgggtgttcaatgattgacaagttggaagaggacttagaacagatgacatctttaaccactctaattgcaaataacactgcaataacaag |
5257330 |
T |
|
| Q |
231 |
agtgcc |
236 |
Q |
| |
|
|||||| |
|
|
| T |
5257329 |
agtgcc |
5257324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 5425855 - 5425975
Alignment:
| Q |
90 |
ccttccaagaaacatctatacgttgaaatctctgaaaactctcattctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaa |
189 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||| ||| |||||||||||| ||||||||| | |||||||||||| |
|
|
| T |
5425855 |
ccttccaagaaacatctataagttgaaatctctgaaaactctcattctttctgggtgtgtaatgattgacaagttggaagaggacatagaacaaatggaa |
5425954 |
T |
|
| Q |
190 |
tctttaaccactctgattgca |
210 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
5425955 |
tctttaaccactctgattgca |
5425975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 240
Target Start/End: Original strand, 5096574 - 5096803
Alignment:
| Q |
11 |
tgtctgaggtttcccaaagtattggacatctcaagaaaattcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaaacatctatac |
110 |
Q |
| |
|
||||||||||||| | || |||||| |||||| |||||||| | ||| ||||| |||||||| | || ||| ||| ||||||| ||| |||||||| |
|
|
| T |
5096574 |
tgtctgaggtttctcctagcattggaaatctcagtgaaattcttctaatagatttggaagattgtgttagccttcgtagccttccaggaagcatctataa |
5096673 |
T |
|
| Q |
111 |
gttgaaatctctgaaaactctcattctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccactctgattgca |
210 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| ||| ||| ||||||| |||| ||||||||| | |||||||||||||| ||||||| |||| ||||| |
|
|
| T |
5096674 |
gttgaaatctctgaaaactctcattctttctgggtgtataatgattgacgagttggaagaggacatagaacaaatggaatcattaaccattctgcttgca |
5096773 |
T |
|
| Q |
211 |
aatgacactggtataacaaaagtgcccttt |
240 |
Q |
| |
|
||| ||||||| |||| || ||| |||||| |
|
|
| T |
5096774 |
aataacactggaataaaaagagtacccttt |
5096803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 35 - 219
Target Start/End: Original strand, 5447047 - 5447231
Alignment:
| Q |
35 |
gacatctcaagaaaattcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaaacatctatacgttgaaatctctgaaaactctcat |
134 |
Q |
| |
|
|||||||||| ||||||||| ||||||| ||| |||| || || || || |||| ||| |||| || |||||||| |||||||||| ||||||||||| | |
|
|
| T |
5447047 |
gacatctcaataaaattcttctgataaacttggaagactgcattagcctatgtagcctcccaaaaagcatctataagttgaaatctttgaaaactctcgt |
5447146 |
T |
|
| Q |
135 |
tctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccactctgattgcaaatgacact |
219 |
Q |
| |
|
||| ||||| |||||||||||||||||| | ||||||||||| || |||||||||||||||||||||| |||||||| ||||| |
|
|
| T |
5447147 |
tctttctggttgtttaaagattgacaaggtggaagaggacttcgagaaaatggaatctttaaccactcttcttgcaaataacact |
5447231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 62 - 240
Target Start/End: Complemental strand, 5102778 - 5102600
Alignment:
| Q |
62 |
atttgaaagattgtatcagtctttgtaaccttccaagaaacatctatacgttgaaatctctgaaaactctcattctatctggatgtttaaagattgacaa |
161 |
Q |
| |
|
||||| |||||||| | || ||| ||| ||||||||||| |||||||| |||||||||| |||||| |||||||| ||||| ||||||| ||||||||| |
|
|
| T |
5102778 |
atttggaagattgtgttagccttcgtagccttccaagaagcatctataagttgaaatctttgaaaatactcattctttctgggtgtttaatgattgacaa |
5102679 |
T |
|
| Q |
162 |
gttagaagaggacttggaacaaatggaatctttaaccactctgattgcaaatgacactggtataacaaaagtgcccttt |
240 |
Q |
| |
|
||| ||||| |||||||||||||||||||| ||||||||||| | ||||| |||||| ||||||| |||||||||| |
|
|
| T |
5102678 |
gttggaagacgacttggaacaaatggaatcattaaccactcttctagcaaacaacactgcaataacaacagtgcccttt |
5102600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 5284614 - 5284375
Alignment:
| Q |
1 |
tgtccgaggctgtctgaggtttcccaaagtattggacatctcaagaaaattcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaa |
100 |
Q |
| |
|
||||| ||||| ||||||||||| | || |||||| ||||||| |||||| |||||||||||| ||| |||||| || | |||| ||| ||| ||| |
|
|
| T |
5284614 |
tgtccaaggctatctgaggtttcacctagcattggaaatctcaataaaattgctttgataaattttgaaggttgtattagcttatgtagcctcccacgaa |
5284515 |
T |
|
| Q |
101 |
acatctatacgttgaaatctctgaaaactctcattctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccac |
200 |
Q |
| |
|
|||||||| |||||||||||| |||||| ||||||| | ||| |||| || |||||||||||| ||||||||||| ||||| ||| |||||||||||| |
|
|
| T |
5284514 |
gcatctataagttgaaatctctaaaaactttcattctttttgggtgttcaatgattgacaagttggaagaggacttagaacagatgacatctttaaccac |
5284415 |
T |
|
| Q |
201 |
tctgattgcaaatgacactggtataacaaaagtgcccttt |
240 |
Q |
| |
|
|||||| || ||| |||| | ||||||| |||||||||| |
|
|
| T |
5284414 |
tctgatagctaataacaccgcaataacaagagtgcccttt |
5284375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 5157843 - 5157634
Alignment:
| Q |
11 |
tgtctgaggtttcccaaagtattggacatctcaagaaaattcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaaacatctatac |
110 |
Q |
| |
|
||||||||||||| | || |||||| |||||| |||||||| | ||| ||||| |||||||| | || ||| | | ||||||||||| |||||||| |
|
|
| T |
5157843 |
tgtctgaggtttctcctagcattggaaatctcagtgaaattcttctaatagatttggaagattgtgttagccttcgaagccttccaagaagcatctataa |
5157744 |
T |
|
| Q |
111 |
gttgaaatctctgaaaactctcattctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccactctgattgca |
210 |
Q |
| |
|
||||||||||||||||| | | ||||| || || ||| ||| |||||||||||| ||||||||| | ||||| ||||||||||||||||||||| ||||| |
|
|
| T |
5157743 |
gttgaaatctctgaaaattttaattctttcagggtgtataatgattgacaagttggaagaggacatagaacagatggaatctttaaccactctgcttgca |
5157644 |
T |
|
| Q |
211 |
aatgacactg |
220 |
Q |
| |
|
| ||||||| |
|
|
| T |
5157643 |
cacgacactg |
5157634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 5350339 - 5350459
Alignment:
| Q |
90 |
ccttccaagaaacatctatacgttgaaatctctgaaaactctcattctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaa |
189 |
Q |
| |
|
||||||||||| ||||| || |||||||||||| |||||||||||||| || || ||| ||| |||||||||||| ||||||||| | |||||||||||| |
|
|
| T |
5350339 |
ccttccaagaagcatctttaagttgaaatctctcaaaactctcattctttcagggtgtataatgattgacaagttggaagaggacatagaacaaatggaa |
5350438 |
T |
|
| Q |
190 |
tctttaaccactctgattgca |
210 |
Q |
| |
|
||||||||||||||| ||||| |
|
|
| T |
5350439 |
tctttaaccactctgcttgca |
5350459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 125 - 241
Target Start/End: Original strand, 5281280 - 5281396
Alignment:
| Q |
125 |
aaactctcattctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccactctgattgcaaatgacactggtat |
224 |
Q |
| |
|
||||||| ||||| ||||| |||| || |||| |||||||||||||||||||||||||||||||||| ||||| || |||||||| |||||||||| || |
|
|
| T |
5281280 |
aaactctgattctttctgggtgttcaatgattaacaagttagaagaggacttggaacaaatggaatccttaacgaccctgattgctaatgacactgcaat |
5281379 |
T |
|
| Q |
225 |
aacaaaagtgccctttg |
241 |
Q |
| |
|
||||| ||| ||||||| |
|
|
| T |
5281380 |
aacaagagttccctttg |
5281396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 220
Target Start/End: Original strand, 5370473 - 5370646
Alignment:
| Q |
47 |
aaattcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaaacatctatacgttgaaatctctgaaaactctcattctatctggatg |
146 |
Q |
| |
|
|||||||| | ||| |||| |||||||| | || ||| ||||||||||||||| ||| |||| |||||||||||| || ||||| ||||| || || || |
|
|
| T |
5370473 |
aaattcttctaatagattttgaagattgtgttagccttcgtaaccttccaagaagcatttataagttgaaatctctaaagactcttattctttcagggtg |
5370572 |
T |
|
| Q |
147 |
tttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccactctgattgcaaatgacactg |
220 |
Q |
| |
|
| ||| |||||| ||||| |||||||| | ||||| |||||||| |||||||||||| |||||||| |||||| |
|
|
| T |
5370573 |
tgtaatgattgagaagttggaagaggatatagaacagatggaatcattaaccactctgcttgcaaataacactg |
5370646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 47 - 183
Target Start/End: Complemental strand, 5244046 - 5243910
Alignment:
| Q |
47 |
aaattcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaaacatctatacgttgaaatctctgaaaactctcattctatctggatg |
146 |
Q |
| |
|
|||||||| | ||| ||||| |||||||| | || ||| | | ||||||||||| |||||||| ||||||||||||||||||| ||||||| || || || |
|
|
| T |
5244046 |
aaattcttctaatagatttggaagattgtgttagccttcgaagccttccaagaagcatctataagttgaaatctctgaaaactttcattctctcagggtg |
5243947 |
T |
|
| Q |
147 |
tttaaagattgacaagttagaagaggacttggaacaa |
183 |
Q |
| |
|
| ||| |||||| ||||| |||||||||||||||||| |
|
|
| T |
5243946 |
tataatgattgagaagttggaagaggacttggaacaa |
5243910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 125 - 241
Target Start/End: Original strand, 5179521 - 5179637
Alignment:
| Q |
125 |
aaactctcattctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccactctgattgcaaatgacactggtat |
224 |
Q |
| |
|
||||||| ||||| ||||| |||| ||||||| ||||||| ||||||||||||||| |||||||||| ||||| || |||||||| |||||||||| || |
|
|
| T |
5179521 |
aaactctgattctttctgggtgttcaaagattaacaagttggaagaggacttggaagaaatggaatccttaacgaccctgattgctaatgacactgcaat |
5179620 |
T |
|
| Q |
225 |
aacaaaagtgccctttg |
241 |
Q |
| |
|
||| | ||| ||||||| |
|
|
| T |
5179621 |
aactagagttccctttg |
5179637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 90 - 220
Target Start/End: Original strand, 5396895 - 5397025
Alignment:
| Q |
90 |
ccttccaagaaacatctatacgttgaaatctctgaaaactctcattctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaa |
189 |
Q |
| |
|
||||||||||| || |||| ||||||||| || ||||||| |||| ||||| |||||| ||||||||| || ||||| || |||||||| |||||| |
|
|
| T |
5396895 |
ccttccaagaagtatttataagttgaaatcactacaaactcttcttctttctgggtgtttactgattgacaaattggaagaagatttggaacagatggaa |
5396994 |
T |
|
| Q |
190 |
tctttaaccactctgattgcaaatgacactg |
220 |
Q |
| |
|
||||||||||| || |||||||| |||||| |
|
|
| T |
5396995 |
tctttaaccaccttggttgcaaataacactg |
5397025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 5147111 - 5147046
Alignment:
| Q |
11 |
tgtctgaggtttcccaaagtattggacatctcaagaaaattcttttgataaatttgaaagattgta |
76 |
Q |
| |
|
||||||| ||||| || ||||||||| ||||||| ||||||||| ||||||||||| ||||||||| |
|
|
| T |
5147111 |
tgtctgaagtttctcatagtattggatatctcaataaaattcttctgataaatttggaagattgta |
5147046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 90; Significance: 1e-43; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 36214044 - 36213819
Alignment:
| Q |
11 |
tgtctgaggtttcccaaagtattggacatctcaagaaaattcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaaacatctatac |
110 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| ||| ||||| | ||||||||| |||||||||| || ||| | |||||| | | ||||||| |
|
|
| T |
36214044 |
tgtctgaggtttcccacagtattggacatctcaataaagttcttctaataaatttggaagattgtattagccttcaaagccttcctaaaggtatctataa |
36213945 |
T |
|
| Q |
111 |
gttgaaatctctgaaaactctcattctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccactctgattgca |
210 |
Q |
| |
|
||| |||| || |||||||||||||| |||||||||| |||||||||||| || ||||||||| ||||||| ||||||||||||||||| |||||||| |
|
|
| T |
36213944 |
gttaaaattacttaaaactctcattctttctggatgttcaaagattgacaaattggaagaggacatggaacagatggaatctttaaccaccttgattgca |
36213845 |
T |
|
| Q |
211 |
aatgacactggtataacaaaagtgcc |
236 |
Q |
| |
|
||| |||||| ||||||| |||||| |
|
|
| T |
36213844 |
aataacactgcaataacaagagtgcc |
36213819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 38 - 186
Target Start/End: Complemental strand, 34724774 - 34724626
Alignment:
| Q |
38 |
atctcaagaaaattcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaaacatctatacgttgaaatctctgaaaactctcattct |
137 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| |||| | |||||| | |||||||||| |||||||| ||||| || | |||||||||||| | |
|
|
| T |
34724774 |
atctcaagaaaattctattgataaatttgaaagactgtacaggcctttgtgagcttccaagaagcatctataaattgaagtcagtaaaaactctcattgt |
34724675 |
T |
|
| Q |
138 |
atctggatgtttaaagattgacaagttagaagaggacttggaacaaatg |
186 |
Q |
| |
|
||||||||| ||| ||||||||||| ||||||||| | ||||||||| |
|
|
| T |
34724674 |
gtctggatgtacaaaaattgacaagttggaagaggacatagaacaaatg |
34724626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 241
Target Start/End: Original strand, 18935259 - 18935482
Alignment:
| Q |
18 |
ggtttcccaaagtattggacatctcaagaaaattcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaaacatctatacgttgaaa |
117 |
Q |
| |
|
|||||| || ||||| |||| |||||||||||||||||| |||||||||||||| |||| | |||||| | |||||||||| |||||||| || | |
|
|
| T |
18935259 |
ggtttctcatagtataggacttctcaagaaaattcttttaataaatttgaaagactgtacaggcctttgtgaacttccaagaagcatctataaattagag |
18935358 |
T |
|
| Q |
118 |
tctctgaaaactctcattctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccactctgattgcaaatgaca |
217 |
Q |
| |
|
|| | ||| |||||||| ||||||||||| ||| ||||||||||| ||||||||| | ||||| ||| |||||| ||||| ||| |||| || | | |
|
|
| T |
18935359 |
tcggtcaaagctctcattttatctggatgtacaaaaattgacaagttggaagaggacatagaacagatgacatctttgaccaccctggttgcggataaga |
18935458 |
T |
|
| Q |
218 |
ctggtataacaaaagtgccctttg |
241 |
Q |
| |
|
||| | |||||| ||||||||||| |
|
|
| T |
18935459 |
ctgctgtaacaagagtgccctttg |
18935482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0294 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0294
Description:
Target: scaffold0294; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 62 - 240
Target Start/End: Complemental strand, 9064 - 8886
Alignment:
| Q |
62 |
atttgaaagattgtatcagtctttgtaaccttccaagaaacatctatacgttgaaatctctgaaaactctcattctatctggatgtttaaagattgacaa |
161 |
Q |
| |
|
||||| |||||||| | || ||| ||| ||||||||||| |||||||| ||||||||||||||||||||||||||| ||||| ||| ||| ||||||||| |
|
|
| T |
9064 |
atttggaagattgtgttagccttcgtagccttccaagaagcatctataagttgaaatctctgaaaactctcattctttctgggtgtataatgattgacaa |
8965 |
T |
|
| Q |
162 |
gttagaagaggacttggaacaaatggaatctttaaccactctgattgcaaatgacactggtataacaaaagtgcccttt |
240 |
Q |
| |
|
||| ||||||||| | ||||| ||||||||||||||||||||| ||||| || |||||| |||||| |||||||||| |
|
|
| T |
8964 |
gttggaagaggacatagaacagatggaatctttaaccactctgcttgcagataacactgcattaacaagagtgcccttt |
8886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 87; Significance: 8e-42; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 58 - 236
Target Start/End: Complemental strand, 22584382 - 22584204
Alignment:
| Q |
58 |
ataaatttgaaagattgtatcagtctttgtaaccttccaagaaacatctatacgttgaaatctctgaaaactctcattctatctggatgtttaaagattg |
157 |
Q |
| |
|
||||||||| |||| ||| | || ||||||| ||| |||||||||||||| | |||||||||| |||||||||||||||| ||||| |||| ||| || |
|
|
| T |
22584382 |
ataaatttgcaagactgtttaagcctttgtagcctcccaagaaacatctacaagttgaaatctttgaaaactctcattctttctggctgttaaaaacttt |
22584283 |
T |
|
| Q |
158 |
acaagttagaagaggacttggaacaaatggaatctttaaccactctgattgcaaatgacactggtataacaaaagtgcc |
236 |
Q |
| |
|
| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||| ||||||||| |
|
|
| T |
22584282 |
ataagttggaagaggacttggaacaaatggaatctttaaccactctgcttgcaaatgaaactgcaataaaaaaagtgcc |
22584204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 170
Target Start/End: Complemental strand, 14767262 - 14767123
Alignment:
| Q |
31 |
attggacatctcaagaaaattcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaaacatctatacgttgaaatctctgaaaactc |
130 |
Q |
| |
|
|||||| |||||||||| ||||| | ||||||||||| || |||| |||||| || || |||||| | |||||| ||||||||| ||||||||| |
|
|
| T |
14767262 |
attggagatctcaagaatgttcttctcataaatttgaaggactgtacaagtcttgaaaatctcccaagagagatctatcaattgaaatctttgaaaactc |
14767163 |
T |
|
| Q |
131 |
tcattctatctggatgtttaaagattgacaagttagaaga |
170 |
Q |
| |
|
|||| || || || |||| |||||||||||| || ||||| |
|
|
| T |
14767162 |
tcatcctttccggctgttcaaagattgacaaattggaaga |
14767123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 78; Significance: 2e-36; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 236
Target Start/End: Complemental strand, 47987047 - 47986842
Alignment:
| Q |
31 |
attggacatctcaagaaaattcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaaacatctatacgttgaaatctctgaaaactc |
130 |
Q |
| |
|
|||||||||||| | ||||||||| ||||||||||| |||| ||||| || || |||| ||| ||||||| || || | || |||||||| ||||||| |
|
|
| T |
47987047 |
attggacatctcgacaaaattcttctgataaatttggaagactgtattagcctatgtagcctcccaagaagcacatacaaattaaaatctctaaaaactc |
47986948 |
T |
|
| Q |
131 |
tcattctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccactctgattgcaaatgacactggtataacaaa |
230 |
Q |
| |
|
||||||| ||||| |||||||||||| ||||||| ||||||||| ||||| ||||| |||||||||| ||| || |||||||| |||||| ||||||| |
|
|
| T |
47986947 |
tcattctttctggctgtttaaagattaacaagttggaagaggacatggaataaatgaaatctttaactactttggttgcaaataacactgcgataacaag |
47986848 |
T |
|
| Q |
231 |
agtgcc |
236 |
Q |
| |
|
|||||| |
|
|
| T |
47986847 |
agtgcc |
47986842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 236
Target Start/End: Complemental strand, 47996334 - 47996129
Alignment:
| Q |
31 |
attggacatctcaagaaaattcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaaacatctatacgttgaaatctctgaaaactc |
130 |
Q |
| |
|
|||||||||||| | ||||||||| ||||||||||| |||| ||||| || || |||| ||| ||||||| || || | || |||||||| ||||||| |
|
|
| T |
47996334 |
attggacatctcgacaaaattcttctgataaatttggaagactgtattagcctatgtagcctcccaagaagcacatacaaattaaaatctctaaaaactc |
47996235 |
T |
|
| Q |
131 |
tcattctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccactctgattgcaaatgacactggtataacaaa |
230 |
Q |
| |
|
||||||| ||||| |||||||||||| ||||||| ||||||||| ||||| ||||| |||||||||| ||| || |||||||| |||||| ||||||| |
|
|
| T |
47996234 |
tcattctttctggctgtttaaagattaacaagttggaagaggacatggaataaatgaaatctttaactactttggttgcaaataacactgcgataacaag |
47996135 |
T |
|
| Q |
231 |
agtgcc |
236 |
Q |
| |
|
|||||| |
|
|
| T |
47996134 |
agtgcc |
47996129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 236
Target Start/End: Complemental strand, 48005621 - 48005416
Alignment:
| Q |
31 |
attggacatctcaagaaaattcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaaacatctatacgttgaaatctctgaaaactc |
130 |
Q |
| |
|
|||||||||||| | ||||||||| ||||||||||| |||| ||||| || || |||| ||| ||||||| || || | || |||||||| ||||||| |
|
|
| T |
48005621 |
attggacatctcgacaaaattcttctgataaatttggaagactgtattagcctatgtagcctcccaagaagcacatacaaattaaaatctctaaaaactc |
48005522 |
T |
|
| Q |
131 |
tcattctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccactctgattgcaaatgacactggtataacaaa |
230 |
Q |
| |
|
||||||| ||||| |||||||||||| ||||||| ||||||||| ||||| ||||| |||||||||| ||| || |||||||| |||||| ||||||| |
|
|
| T |
48005521 |
tcattctttctggctgtttaaagattaacaagttggaagaggacatggaataaatgaaatctttaactactttggttgcaaataacactgcgataacaag |
48005422 |
T |
|
| Q |
231 |
agtgcc |
236 |
Q |
| |
|
|||||| |
|
|
| T |
48005421 |
agtgcc |
48005416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 236
Target Start/End: Complemental strand, 48014906 - 48014701
Alignment:
| Q |
31 |
attggacatctcaagaaaattcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaaacatctatacgttgaaatctctgaaaactc |
130 |
Q |
| |
|
|||||||||||| | ||||||||| ||||||||||| |||| ||||| || || |||| ||| ||||||| || || | || |||||||| ||||||| |
|
|
| T |
48014906 |
attggacatctcgacaaaattcttctgataaatttggaagactgtattagcctatgtagcctcccaagaagcacatacaaattaaaatctctaaaaactc |
48014807 |
T |
|
| Q |
131 |
tcattctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccactctgattgcaaatgacactggtataacaaa |
230 |
Q |
| |
|
||||||| ||||| |||||||||||| ||||||| ||||||||| ||||| ||||| |||||||||| ||| || |||||||| |||||| ||||||| |
|
|
| T |
48014806 |
tcattctttctggctgtttaaagattaacaagttggaagaggacatggaataaatgaaatctttaactactttggttgcaaataacactgcgataacaag |
48014707 |
T |
|
| Q |
231 |
agtgcc |
236 |
Q |
| |
|
|||||| |
|
|
| T |
48014706 |
agtgcc |
48014701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 161
Target Start/End: Complemental strand, 6906113 - 6905991
Alignment:
| Q |
39 |
tctcaagaaaattcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaaacatctatacgttgaaatctctgaaaactctcattcta |
138 |
Q |
| |
|
||||||||| ||||| ||||||||||||| || |||| |||||| | || || ||||| | |||||| | ||| |||| |||||||||||||||| |
|
|
| T |
6906113 |
tctcaagaagcttcttctgataaatttgaaggactgtacaagtcttggcaatctaccaagggagatctatcagctgatatctgtgaaaactctcattctt |
6906014 |
T |
|
| Q |
139 |
tctggatgtttaaagattgacaa |
161 |
Q |
| |
|
| ||| |||| |||||||||||| |
|
|
| T |
6906013 |
tttggttgttcaaagattgacaa |
6905991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 50 - 220
Target Start/End: Original strand, 8877514 - 8877684
Alignment:
| Q |
50 |
ttcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaaacatctatacgttgaaatctctgaaaactctcattctatctggatgttt |
149 |
Q |
| |
|
||||||||||||||||| |||||||||| || ||| | | ||||||||||| || || | |||||||||||| ||| |||||||||| ||||| |||| |
|
|
| T |
8877514 |
ttcttttgataaatttggaagattgtattagccttcggagccttccaagaagtatatacaagttgaaatctctaaaatctctcattctttctgggtgttc |
8877613 |
T |
|
| Q |
150 |
aaagattgacaagttagaagaggacttggaacaaatggaatctttaaccactctgattgcaaatgacactg |
220 |
Q |
| |
|
|| |||||||||||| || |||||||| ||||| ||| ||||||||||||||||| |||||||| |||||| |
|
|
| T |
8877614 |
aatgattgacaagttggaggaggacttagaacagatgaaatctttaaccactctgcttgcaaataacactg |
8877684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 167
Target Start/End: Original strand, 15802797 - 15802933
Alignment:
| Q |
31 |
attggacatctcaagaaaattcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaaacatctatacgttgaaatctctgaaaactc |
130 |
Q |
| |
|
|||||| ||||||| || ||||| ||||||||||||| || |||| |||||| | || || |||||| | |||||| |||| | | ||||||||| |
|
|
| T |
15802797 |
attggagatctcaacaatcttcttctgataaatttgaaggactgtacgagtcttagcaatctcccaagagagatctatcaattgagaacagtgaaaactc |
15802896 |
T |
|
| Q |
131 |
tcattctatctggatgtttaaagattgacaagttaga |
167 |
Q |
| |
|
|||| || ||||| |||| |||||||||||| ||||| |
|
|
| T |
15802897 |
tcatcctttctggttgttcaaagattgacaaattaga |
15802933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0813 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0813
Description:
Target: scaffold0813; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 236
Target Start/End: Complemental strand, 4937 - 4816
Alignment:
| Q |
115 |
aaatctctgaaaactctcattctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccactctgattgcaaatg |
214 |
Q |
| |
|
|||||||| ||||| | ||||| |||||||||| ||||||||||| || || |||||||||||||| |||||||| || | || ||||||| || |
|
|
| T |
4937 |
aaatctctagaaactttgattctttctggatgttccaagattgacaaattggaggaggacttggaacagatggaatcattgaaaaccttgattgcggata |
4838 |
T |
|
| Q |
215 |
acactggtataacaaaagtgcc |
236 |
Q |
| |
|
| |||| ||||||||||||||| |
|
|
| T |
4837 |
agactgctataacaaaagtgcc |
4816 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0286 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0286
Description:
Target: scaffold0286; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 240
Target Start/End: Original strand, 6629 - 6754
Alignment:
| Q |
115 |
aaatctctgaaaactctcattctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccactctgattgcaaatg |
214 |
Q |
| |
|
|||||||| ||||| | ||||| |||||||||| ||||||||||| || || |||||||||||||| |||||||| || | || ||||||| || |
|
|
| T |
6629 |
aaatctctagaaactttgattctttctggatgttccaagattgacaaattggaggaggacttggaacagatggaatcattgaaaaccttgattgcggata |
6728 |
T |
|
| Q |
215 |
acactggtataacaaaagtgcccttt |
240 |
Q |
| |
|
| |||| |||||||||||| |||||| |
|
|
| T |
6729 |
agactgctataacaaaagttcccttt |
6754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0552 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0552
Description:
Target: scaffold0552; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 194
Target Start/End: Complemental strand, 8465 - 8317
Alignment:
| Q |
46 |
aaaattcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaaacatctatacgttgaaatctctgaaaactctcattctatctggat |
145 |
Q |
| |
|
||||||||| | |||||||||| ||| || | ||||| | || |||||||||| || ||||| || |||||||| ||||| | ||||| ||||||| |
|
|
| T |
8465 |
aaaattcttctcataaatttgacagactgcacaggtcttcggaaacttccaagaagcaactataaattaaaatctctagaaactttgattctttctggat |
8366 |
T |
|
| Q |
146 |
gtttaaagattgacaagttagaagaggacttggaacaaatggaatcttt |
194 |
Q |
| |
|
||| | |||||| || || || |||||||||||||| ||||||||||| |
|
|
| T |
8365 |
gttccatgattgaaaaattggaggaggacttggaacagatggaatcttt |
8317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 33; Significance: 0.000000001; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 213
Target Start/End: Complemental strand, 3286748 - 3286648
Alignment:
| Q |
113 |
tgaaatctctgaaaactctcattctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccactctgattgcaaa |
212 |
Q |
| |
|
|||||||| |||| |||||||| || ||||| |||| ||||||||||||||| ||||| ||| | | || |||||||| || || || ||||||||||| |
|
|
| T |
3286748 |
tgaaatctttgaacactctcatcctttctggttgttcaaagattgacaagttggaagaagacatagtgcagatggaatccttgacaacactgattgcaaa |
3286649 |
T |
|
| Q |
213 |
t |
213 |
Q |
| |
|
| |
|
|
| T |
3286648 |
t |
3286648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 212
Target Start/End: Complemental strand, 3262860 - 3262760
Alignment:
| Q |
112 |
ttgaaatctctgaaaactctcattctatctggatgtttaaagattgacaagttagaagaggacttggaacaaatggaatctttaaccactctgattgcaa |
211 |
Q |
| |
|
||||||||| ||||||||||||| || ||||| || | |||||||||||| || ||||| ||| | | || |||||||| || || || |||||||||| |
|
|
| T |
3262860 |
ttgaaatctttgaaaactctcatactttctggttgctcaaagattgacaaattggaagaagacatagtgcagatggaatccttgacaacactgattgcaa |
3262761 |
T |
|
| Q |
212 |
a |
212 |
Q |
| |
|
| |
|
|
| T |
3262760 |
a |
3262760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 170
Target Start/End: Complemental strand, 7164968 - 7164828
Alignment:
| Q |
31 |
attggacatctcaagaaaattcttttgataaatttgaaagattgtatcagtctttgtaaccttccaagaaacatctat-acgttgaaatctctgaaaact |
129 |
Q |
| |
|
|||||| |||||||||| |||| | ||||||||||| || |||| |||||| | || || ||||| || |||||| | ||||||||| |||||||| |
|
|
| T |
7164968 |
attggagatctcaagaatgttctactaataaatttgaaggactgtacaagtcttagcaatctcccaaggaatatctatcaagttgaaatcattgaaaact |
7164869 |
T |
|
| Q |
130 |
ctcattctatctggatgtttaaagattgacaagttagaaga |
170 |
Q |
| |
|
||||| || ||||| |||| |||||||| | |||| ||||| |
|
|
| T |
7164868 |
ctcatcctttctggttgttcaaagattgcctagttggaaga |
7164828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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