View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21326_high_37 (Length: 209)
Name: NF21326_high_37
Description: NF21326
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21326_high_37 |
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Alignment Details
Target: chr5 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 36284956 - 36284773
Alignment:
| Q |
10 |
acaaccattcatcttctattcgattaacctataaatctattaaattataacctgatcaattaactatctacacgaaatcgattaatagttcagcaaagca |
109 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36284956 |
acaaccattcatcttctattcgattaacctacaaatctattaaattataacctgatcaattaactatctacacgaaatcgattaatagttcagcaaagca |
36284857 |
T |
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| Q |
110 |
aaatacaaattaggnnnnnnnnntcgtcatcaataacaaaatcaattcataatcaacatataacatacatcatcaacagaaatt |
193 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36284856 |
aaatacaaattaggaaaaaaaaatcgtcatcaataacaaaatcaattcataatcaacatataacatacatcatcaacagaaatt |
36284773 |
T |
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