View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21326_low_10 (Length: 385)
Name: NF21326_low_10
Description: NF21326
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21326_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 366; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 366; E-Value: 0
Query Start/End: Original strand, 1 - 378
Target Start/End: Complemental strand, 38261722 - 38261345
Alignment:
| Q |
1 |
gtcagagagggagggctatggtctgtatgaatgaggtgagtgattatgttctttcttgttataggtgttggctatgtcgaagcccgacatgttaggaatg |
100 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38261722 |
gtcagagagggagggctatggtctttatgaatgaggtgagtgattatgttctttcttgttataggtgttggctatgtcgaagcccgacatgttaggaatg |
38261623 |
T |
|
| Q |
101 |
caaacaaagttttaagcagaactctttttgtacataacagtgttgttgttagacacaaaaagcagacttcacagaatgggagcttttgctgaaatgagcg |
200 |
Q |
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||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38261622 |
caaacaaagttttcagcagaactctttttgtacataacagtgttgttgttggacacaaaaagcagacttcacagaatgggagcttttgctgaaatgagcg |
38261523 |
T |
|
| Q |
201 |
tgcttatatacgtcatcagctacaacttttaacataatatgatcaataccctcttcaattctatgaagaaaggtgcaaaaagagaagagaaaccacagct |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38261522 |
tgcttatatacgtcatcagctacaacttttaacataatatgatcaataccctcttcaattctatgaagaaaggtgcaaaaagagaagagaaaccacagct |
38261423 |
T |
|
| Q |
301 |
tttgcttttaggtttggaagtattttgttttgtacttcataattactgacaaaaggttaaagcattattccctttgct |
378 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38261422 |
tttgcttttaggtttggaagtattttgttttgtacttcataattactgacaaaaggttaaagcattattccctttgct |
38261345 |
T |
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