View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21326_low_31 (Length: 239)
Name: NF21326_low_31
Description: NF21326
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21326_low_31 |
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Alignment Details
Target: chr8 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 13 - 223
Target Start/End: Complemental strand, 35176103 - 35175893
Alignment:
| Q |
13 |
cacagacataaaaccggtaacaaggtttaattggttgattaatcatcttgagaatggaaatggaaaagttctataaagaagccatgtgtccataaaacac |
112 |
Q |
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| T |
35176103 |
cacaaacataaaaccggtaacaaggtttaattggttgattaatcatcttgaggatggaaatggaaaagttctataaagaagccatgtgtccataaaacac |
35176004 |
T |
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| Q |
113 |
tccttgatcaccacgtgtcttacattacattgaaccaaataccaaacaatccgaaaacaaagtttgttttcttatttatagcactaaggatggaacaaaa |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35176003 |
tccttgatcaccacgtgtcttacattacattgaaccaaataccaaacaatccgaaaacaaagtttgttttcttatttatagcactaaggatggaacaaaa |
35175904 |
T |
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| Q |
213 |
gaggaggttgt |
223 |
Q |
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||||||||||| |
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| T |
35175903 |
gaggaggttgt |
35175893 |
T |
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