View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21328_low_2 (Length: 291)
Name: NF21328_low_2
Description: NF21328
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21328_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 17 - 285
Target Start/End: Complemental strand, 22071822 - 22071554
Alignment:
| Q |
17 |
agtgctttcaagttgcaaccatatagtgtttctaagagcttgaaagtgaatggaactaaaagatggtatactgtcaagaacacaacctttttaacagaag |
116 |
Q |
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| T |
22071822 |
agtgctttcaaattgcaaccatatagtgtttctaagagcttgaaagtgaatggaactaaaagatggtatactgtcaagaacacaacctttttaaaagaag |
22071723 |
T |
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| Q |
117 |
ccgaaaccacatcattttcgactgatgaaaataaacattaacatgttgttgatttggaagccctccttctaacccattaccatcaagaatctctctttta |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22071722 |
ccgaaaccacatcattttcgactgatgaaaataaacattaacatgttgttgatttggaagccctccttctaacccattaccatcaagaatctctctttta |
22071623 |
T |
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| Q |
217 |
atggaaaatcatttccaaacctccatttcatcagtgtttgtttttgcaccaaagcacaggttctgctcg |
285 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| |
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| T |
22071622 |
atggaaaatcatttccaaacctccatttcatcagtgtttgtttttgcaccaaagcatagcttcagctcg |
22071554 |
T |
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