View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2132_low_11 (Length: 278)
Name: NF2132_low_11
Description: NF2132
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2132_low_11 |
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Alignment Details
Target: chr4 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 53070377 - 53070119
Alignment:
| Q |
1 |
cacatttattcaagaatagtattttctaccaagaattaggcatagatgattggaccttcctttcacacccgttgtgatttgggtttaagtcataagttct |
100 |
Q |
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| T |
53070377 |
cacatttattcaagaatagtattttctaccaagaaataggcttagatgattggaccttcctttcacacccgttgtgatttgggttaaagtcctaagttct |
53070278 |
T |
|
| Q |
101 |
acaattggtgggttatattaaaacccatacagatgccagtgtaatacaatacaaatacgttgatacacaannnnnnnnaaaattcaagacacgacatgtt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
53070277 |
acaattggtgggttatattaaaacccatacagatgccagtgtaatacaatacaaatacgttgatacacatttttttttaaaattcaagacacgacatgtt |
53070178 |
T |
|
| Q |
201 |
acgttaataacatttaataaataacttatgtacatatataatacttgtaaagaaacatc |
259 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
53070177 |
acgttaataacatttaatgaataacttatgtacatatataatacttgtaaagaaacatc |
53070119 |
T |
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