View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2132_low_2 (Length: 625)
Name: NF2132_low_2
Description: NF2132
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2132_low_2 |
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Alignment Details
Target: chr8 (Bit Score: 509; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 509; E-Value: 0
Query Start/End: Original strand, 20 - 614
Target Start/End: Original strand, 30399433 - 30400026
Alignment:
| Q |
20 |
cttgtgtgctaggcgcaatcaattattgtccaatttatatttactatactctctataaaattgtaagttccatggtttcactaattgattgttctacnnn |
119 |
Q |
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| T |
30399433 |
cttgtgtgctaggcgcaatcaattattgtccaatttatatttactatactctctataaaattgtaagttccatggtttcactaattgattgt-ctacttt |
30399531 |
T |
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| Q |
120 |
nnnnaatgttggtaccaatatcctattgacaaattaattcaaaagcatttttgtattatgacggcagggacggaaagcaaaacatttataactatttaca |
219 |
Q |
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| T |
30399532 |
ttttaatgttggtaccaatatcctatggacaaattaattcaaaagcatttttgtatgatgacggcaaggacagaaagcaaaacatttataacgatttaca |
30399631 |
T |
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| Q |
220 |
tatttaagccataatcttatcttataatgagtttatctttaatacgaagatatcaaatactattttatattttatttttgtctagattaacttgcactaa |
319 |
Q |
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| T |
30399632 |
tatttaagccataatcttatattataatgagtttatctttaatacgaagatatcaaatactattttatattttatttttgtctaaattaacttgcactaa |
30399731 |
T |
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| Q |
320 |
aactgtgaatacccaaaataaatctacacttcaaatttatttaatgtaaatttcagaaacacgttacgttacaccaaagaaaaatgccaaaactagttta |
419 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
30399732 |
aactgtgaatacccaaaataaatctacacttcaaatttatttaatgtaaatttcagaaacacgttacattacaccaaagaaaaatgccaaaactagttta |
30399831 |
T |
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| Q |
420 |
aatctcagtcgtggcatgccactgttcctctgctttctcacacannnnnnnctctgacaactactgaagttgctctgtctctgtctctgtctcattcact |
519 |
Q |
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| T |
30399832 |
aatctcagtcgtggcatgccactgttcctctgctttctcacacatttttttctctgacaactactgaagttgctctgtctctgtctctgtctcattcact |
30399931 |
T |
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| Q |
520 |
catctacttccatcatcaccaacataaaaatgcaaccttttagtttcatcctctcattttctttcacccatttcaaccataacacttcatctcac |
614 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
30399932 |
catctacttccatcatcaccaacataaaaatgcaaccttttagtttcatcctctcattttctttcacccatttcaaccataacacttcatttcac |
30400026 |
T |
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