View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2132_low_5 (Length: 393)

Name: NF2132_low_5
Description: NF2132
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2132_low_5
NF2132_low_5
[»] chr7 (39 HSPs)
chr7 (18-358)||(28693828-28694198)
chr7 (159-329)||(3012304-3012477)
chr7 (150-297)||(38128932-38129082)
chr7 (187-360)||(19377349-19377534)
chr7 (187-329)||(4843298-4843443)
chr7 (143-292)||(21688146-21688299)
chr7 (228-329)||(35300445-35300549)
chr7 (205-360)||(41759602-41759769)
chr7 (174-289)||(814948-815066)
chr7 (228-329)||(26722955-26723059)
chr7 (192-283)||(21932760-21932854)
chr7 (177-256)||(42439540-42439619)
chr7 (172-251)||(41862319-41862398)
chr7 (235-329)||(7873232-7873329)
chr7 (143-204)||(35300393-35300454)
chr7 (235-332)||(5991432-5991529)
chr7 (39-75)||(47552261-47552297)
chr7 (39-77)||(11808084-11808122)
chr7 (22-75)||(21285342-21285400)
chr7 (146-204)||(23704437-23704495)
chr7 (22-75)||(29658261-29658319)
chr7 (43-77)||(33248817-33248851)
chr7 (39-77)||(43635634-43635672)
chr7 (39-74)||(14707341-14707376)
chr7 (22-72)||(34948157-34948212)
chr7 (17-67)||(38792268-38792323)
chr7 (22-75)||(4169124-4169182)
chr7 (266-332)||(5850724-5850790)
chr7 (40-74)||(10958082-10958116)
chr7 (39-77)||(30152787-30152825)
chr7 (43-77)||(31793514-31793548)
chr7 (22-75)||(33202543-33202601)
chr7 (42-75)||(28914891-28914924)
chr7 (39-75)||(2261495-2261531)
chr7 (39-75)||(8725149-8725185)
chr7 (39-75)||(14102509-14102545)
chr7 (39-75)||(14412526-14412562)
chr7 (39-75)||(36315985-36316021)
chr7 (43-75)||(40273869-40273901)
[»] chr6 (41 HSPs)
chr6 (143-329)||(2836132-2836321)
chr6 (228-329)||(15528941-15529045)
chr6 (228-328)||(9696051-9696154)
chr6 (271-331)||(28614434-28614494)
chr6 (214-288)||(339371-339448)
chr6 (228-329)||(9046932-9047036)
chr6 (143-204)||(9696145-9696206)
chr6 (228-328)||(15122039-15122142)
chr6 (228-292)||(34249030-34249097)
chr6 (178-220)||(31188312-31188354)
chr6 (187-253)||(34188856-34188922)
chr6 (143-204)||(2941312-2941373)
chr6 (143-204)||(15529036-15529097)
chr6 (38-74)||(6455502-6455538)
chr6 (39-75)||(9491746-9491782)
chr6 (39-71)||(12101938-12101970)
chr6 (22-73)||(25020517-25020573)
chr6 (39-70)||(3591340-3591371)
chr6 (38-77)||(30833063-30833102)
chr6 (22-71)||(12089149-12089203)
chr6 (39-77)||(20568268-20568306)
chr6 (42-76)||(29284165-29284199)
chr6 (158-220)||(31200137-31200199)
chr6 (143-204)||(9046880-9046941)
chr6 (38-75)||(19680258-19680295)
chr6 (48-77)||(22997385-22997414)
chr6 (48-77)||(23790987-23791016)
chr6 (38-75)||(30938439-30938476)
chr6 (43-75)||(3448400-3448432)
chr6 (43-75)||(4854321-4854353)
chr6 (39-75)||(5641701-5641737)
chr6 (43-75)||(6228275-6228307)
chr6 (39-75)||(6658554-6658590)
chr6 (39-71)||(7720514-7720546)
chr6 (38-74)||(9422882-9422918)
chr6 (43-75)||(18903382-18903414)
chr6 (43-75)||(22983628-22983660)
chr6 (43-75)||(23804748-23804780)
chr6 (38-74)||(26669669-26669705)
chr6 (42-74)||(33628955-33628987)
chr6 (22-77)||(35190809-35190869)
[»] chr5 (56 HSPs)
chr5 (143-292)||(15503947-15504099)
chr5 (154-359)||(17192601-17192818)
chr5 (187-332)||(16667458-16667606)
chr5 (150-329)||(21069003-21069185)
chr5 (187-327)||(12267374-12267517)
chr5 (174-259)||(8214615-8214700)
chr5 (187-291)||(36234547-36234654)
chr5 (143-259)||(6900801-6900917)
chr5 (187-332)||(13942744-13942895)
chr5 (187-326)||(767283-767421)
chr5 (235-332)||(43228655-43228755)
chr5 (235-332)||(32953680-32953780)
chr5 (228-309)||(33006921-33007005)
chr5 (228-329)||(15675307-15675411)
chr5 (228-329)||(34846361-34846465)
chr5 (143-204)||(2476454-2476515)
chr5 (228-292)||(34443997-34444064)
chr5 (143-204)||(34444055-34444116)
chr5 (22-77)||(18872567-18872625)
chr5 (235-332)||(7162096-7162196)
chr5 (143-197)||(14832776-14832830)
chr5 (172-210)||(39605815-39605853)
chr5 (143-204)||(30249054-30249115)
chr5 (143-204)||(35468992-35469053)
chr5 (39-75)||(843379-843415)
chr5 (39-75)||(3535947-3535983)
chr5 (39-75)||(8015883-8015919)
chr5 (39-75)||(38618692-38618728)
chr5 (42-77)||(4674829-4674864)
chr5 (22-72)||(24205486-24205539)
chr5 (38-77)||(31556864-31556903)
chr5 (42-77)||(36045148-36045183)
chr5 (271-334)||(37779665-37779728)
chr5 (43-77)||(4985805-4985839)
chr5 (267-329)||(9738378-9738440)
chr5 (22-75)||(10943764-10943822)
chr5 (43-77)||(15106902-15106936)
chr5 (143-197)||(15675409-15675463)
chr5 (262-332)||(16567794-16567864)
chr5 (22-75)||(19058993-19059051)
chr5 (39-77)||(20191487-20191525)
chr5 (22-71)||(29096297-29096351)
chr5 (22-75)||(32158403-32158461)
chr5 (42-75)||(1463919-1463952)
chr5 (42-75)||(28537183-28537216)
chr5 (39-72)||(35168643-35168676)
chr5 (22-73)||(1244716-1244772)
chr5 (22-77)||(2029117-2029177)
chr5 (76-112)||(12267266-12267302)
chr5 (39-75)||(18478051-18478087)
chr5 (38-74)||(22396998-22397034)
chr5 (37-77)||(24362542-24362582)
chr5 (43-75)||(31250195-31250227)
chr5 (39-75)||(33800941-33800977)
chr5 (43-75)||(38503272-38503304)
chr5 (43-75)||(43227914-43227946)
[»] chr2 (42 HSPs)
chr2 (143-329)||(25562930-25563123)
chr2 (143-255)||(304056-304168)
chr2 (149-292)||(12000554-12000701)
chr2 (187-297)||(17148808-17148920)
chr2 (143-292)||(41010507-41010663)
chr2 (149-284)||(15651247-15651385)
chr2 (150-288)||(17249354-17249495)
chr2 (187-292)||(33909317-33909425)
chr2 (150-240)||(45444404-45444494)
chr2 (178-259)||(16221007-16221088)
chr2 (25-77)||(36520777-36520829)
chr2 (143-204)||(6799850-6799911)
chr2 (22-77)||(11133122-11133182)
chr2 (22-77)||(37912475-37912528)
chr2 (41-76)||(1836635-1836670)
chr2 (22-75)||(8234781-8234839)
chr2 (39-77)||(19905666-19905704)
chr2 (143-197)||(29257463-29257517)
chr2 (143-204)||(41114834-41114895)
chr2 (39-75)||(580794-580830)
chr2 (38-74)||(1244618-1244654)
chr2 (39-75)||(3037633-3037669)
chr2 (22-77)||(11837035-11837095)
chr2 (39-75)||(17154697-17154733)
chr2 (43-75)||(33116222-33116254)
chr2 (38-77)||(25406660-25406699)
chr2 (43-77)||(9796943-9796977)
chr2 (39-77)||(10262785-10262823)
chr2 (39-77)||(23405245-23405283)
chr2 (38-76)||(32288423-32288461)
chr2 (39-77)||(33613616-33613654)
chr2 (172-210)||(34756828-34756866)
chr2 (172-210)||(35531901-35531939)
chr2 (143-204)||(18299107-18299168)
chr2 (22-77)||(24034050-24034102)
chr2 (42-75)||(29035024-29035057)
chr2 (42-75)||(34034398-34034431)
chr2 (45-77)||(2304336-2304368)
chr2 (45-77)||(9802938-9802970)
chr2 (48-76)||(34149672-34149700)
chr2 (41-77)||(41699148-41699184)
chr2 (22-77)||(44721693-44721753)
[»] chr3 (63 HSPs)
chr3 (143-292)||(33179057-33179208)
chr3 (174-292)||(53068279-53068400)
chr3 (187-332)||(41218347-41218495)
chr3 (228-329)||(37516642-37516746)
chr3 (228-329)||(26371038-26371142)
chr3 (228-292)||(44047621-44047688)
chr3 (187-259)||(41358590-41358662)
chr3 (229-292)||(53651935-53652001)
chr3 (228-329)||(7500956-7501060)
chr3 (228-292)||(14461102-14461169)
chr3 (228-292)||(28311314-28311381)
chr3 (143-204)||(7501051-7501112)
chr3 (18-71)||(14417920-14417978)
chr3 (146-204)||(14461160-14461218)
chr3 (20-77)||(32508781-32508843)
chr3 (22-75)||(46328913-46328971)
chr3 (143-204)||(12909923-12909984)
chr3 (228-292)||(25391841-25391908)
chr3 (235-331)||(26278361-26278460)
chr3 (143-204)||(28311372-28311433)
chr3 (22-74)||(33206806-33206863)
chr3 (143-204)||(43700158-43700219)
chr3 (143-204)||(44047679-44047740)
chr3 (21-77)||(49146130-49146191)
chr3 (42-75)||(52030169-52030202)
chr3 (143-204)||(53651993-53652054)
chr3 (21-77)||(54983693-54983754)
chr3 (39-75)||(24537875-24537911)
chr3 (22-77)||(36331715-36331775)
chr3 (39-75)||(42271024-42271060)
chr3 (22-77)||(43774231-43774291)
chr3 (39-74)||(2732712-2732747)
chr3 (21-75)||(3955356-3955415)
chr3 (39-70)||(18201488-18201519)
chr3 (42-77)||(24559435-24559470)
chr3 (38-77)||(32080101-32080140)
chr3 (39-77)||(16006517-16006555)
chr3 (39-73)||(27066660-27066694)
chr3 (39-77)||(31902216-31902254)
chr3 (39-77)||(35483315-35483353)
chr3 (20-77)||(36727450-36727512)
chr3 (39-73)||(45431677-45431711)
chr3 (18-71)||(48173338-48173396)
chr3 (39-73)||(49429510-49429544)
chr3 (22-75)||(49639076-49639134)
chr3 (40-77)||(7020820-7020857)
chr3 (42-75)||(9625031-9625064)
chr3 (42-75)||(10959181-10959214)
chr3 (38-75)||(11668279-11668316)
chr3 (259-292)||(12909857-12909890)
chr3 (22-74)||(18399641-18399698)
chr3 (17-73)||(20623761-20623822)
chr3 (38-75)||(24130607-24130644)
chr3 (42-75)||(27183695-27183728)
chr3 (39-72)||(30157053-30157086)
chr3 (22-74)||(50724416-50724473)
chr3 (22-74)||(50788375-50788432)
chr3 (21-77)||(28963010-28963066)
chr3 (43-75)||(29645842-29645874)
chr3 (22-77)||(36256668-36256728)
chr3 (22-77)||(43566785-43566845)
chr3 (39-75)||(50144617-50144653)
chr3 (39-75)||(53467996-53468032)
[»] chr8 (40 HSPs)
chr8 (143-327)||(39431594-39431781)
chr8 (187-332)||(13243085-13243233)
chr8 (143-291)||(34282825-34282980)
chr8 (228-329)||(3384036-3384140)
chr8 (18-77)||(14010757-14010821)
chr8 (22-77)||(574271-574325)
chr8 (223-301)||(8968364-8968440)
chr8 (37-75)||(4798550-4798588)
chr8 (143-204)||(3383984-3384045)
chr8 (180-237)||(31500794-31500851)
chr8 (21-77)||(33570417-33570478)
chr8 (39-75)||(9525005-9525041)
chr8 (39-75)||(15042376-15042412)
chr8 (39-75)||(24608494-24608530)
chr8 (22-77)||(43468694-43468754)
chr8 (21-72)||(44070356-44070412)
chr8 (18-72)||(8740641-8740700)
chr8 (38-73)||(17467327-17467362)
chr8 (42-77)||(31129348-31129383)
chr8 (42-77)||(35301177-35301212)
chr8 (39-77)||(14683922-14683960)
chr8 (39-77)||(23239170-23239208)
chr8 (143-197)||(36406454-36406508)
chr8 (43-77)||(43456667-43456701)
chr8 (42-75)||(2696581-2696614)
chr8 (42-75)||(2800067-2800100)
chr8 (42-75)||(17855697-17855730)
chr8 (39-72)||(19957332-19957365)
chr8 (39-72)||(25689399-25689432)
chr8 (143-204)||(28928149-28928210)
chr8 (42-75)||(33524444-33524477)
chr8 (39-72)||(34073250-34073283)
chr8 (25-73)||(2376568-2376615)
chr8 (19-74)||(5184873-5184933)
chr8 (39-75)||(8034578-8034614)
chr8 (39-75)||(11823010-11823046)
chr8 (18-77)||(13702337-13702401)
chr8 (43-75)||(41454842-41454874)
chr8 (22-77)||(42762021-42762079)
chr8 (39-75)||(43508459-43508495)
[»] chr4 (66 HSPs)
chr4 (150-360)||(25237531-25237753)
chr4 (143-332)||(2521863-2522054)
chr4 (187-256)||(49745110-49745179)
chr4 (188-299)||(36947543-36947657)
chr4 (191-292)||(41972417-41972521)
chr4 (143-292)||(50099872-50100021)
chr4 (228-329)||(4728553-4728657)
chr4 (187-292)||(52373770-52373878)
chr4 (174-292)||(8901835-8901955)
chr4 (262-329)||(46645598-46645665)
chr4 (228-292)||(4552217-4552284)
chr4 (39-77)||(33076576-33076614)
chr4 (228-292)||(2017454-2017521)
chr4 (143-204)||(4552275-4552336)
chr4 (143-204)||(10715746-10715807)
chr4 (143-204)||(10929516-10929577)
chr4 (25-77)||(35909161-35909212)
chr4 (235-333)||(9694090-9694191)
chr4 (18-75)||(36008323-36008385)
chr4 (143-204)||(2017402-2017463)
chr4 (43-76)||(29430544-29430577)
chr4 (38-75)||(53468744-53468781)
chr4 (37-77)||(9924902-9924942)
chr4 (38-74)||(29785199-29785235)
chr4 (39-75)||(47017957-47017993)
chr4 (38-74)||(49039455-49039491)
chr4 (38-73)||(6202653-6202688)
chr4 (42-77)||(8690260-8690295)
chr4 (39-70)||(41943960-41943991)
chr4 (38-77)||(49319439-49319478)
chr4 (22-71)||(3465635-3465689)
chr4 (22-75)||(3544421-3544479)
chr4 (39-77)||(12856230-12856268)
chr4 (22-75)||(20753114-20753172)
chr4 (22-75)||(26347034-26347085)
chr4 (39-73)||(28221318-28221352)
chr4 (143-197)||(32005980-32006034)
chr4 (22-75)||(36257742-36257800)
chr4 (39-77)||(37032190-37032228)
chr4 (39-77)||(38690712-38690750)
chr4 (262-292)||(40969256-40969286)
chr4 (43-77)||(43362183-43362217)
chr4 (39-77)||(45350322-45350360)
chr4 (39-77)||(45359801-45359839)
chr4 (143-204)||(4728648-4728709)
chr4 (42-75)||(7768802-7768835)
chr4 (42-75)||(9693010-9693043)
chr4 (42-75)||(14149841-14149874)
chr4 (42-75)||(28520745-28520778)
chr4 (22-74)||(30295562-30295619)
chr4 (22-74)||(30324464-30324521)
chr4 (39-72)||(36576315-36576348)
chr4 (143-204)||(40969314-40969375)
chr4 (43-76)||(45847941-45847974)
chr4 (42-75)||(48968224-48968257)
chr4 (39-75)||(3442891-3442927)
chr4 (39-71)||(10757786-10757818)
chr4 (39-71)||(10970957-10970989)
chr4 (22-77)||(12820394-12820454)
chr4 (38-74)||(21023362-21023398)
chr4 (18-77)||(32885734-32885798)
chr4 (43-75)||(37274628-37274660)
chr4 (45-77)||(42411471-42411503)
chr4 (43-75)||(46283170-46283202)
chr4 (39-75)||(53697991-53698027)
chr4 (42-74)||(53815745-53815777)
[»] chr1 (50 HSPs)
chr1 (143-292)||(4642002-4642154)
chr1 (150-259)||(49898443-49898552)
chr1 (187-304)||(24745431-24745551)
chr1 (228-329)||(31844637-31844741)
chr1 (187-259)||(24646120-24646192)
chr1 (179-259)||(34459176-34459256)
chr1 (228-329)||(8239285-8239391)
chr1 (228-329)||(14727324-14727428)
chr1 (172-257)||(6802057-6802142)
chr1 (178-258)||(9527113-9527193)
chr1 (214-331)||(48940419-48940539)
chr1 (228-292)||(37154007-37154074)
chr1 (228-292)||(44305443-44305510)
chr1 (228-329)||(6331680-6331784)
chr1 (18-77)||(11405502-11405566)
chr1 (18-77)||(15774297-15774361)
chr1 (229-292)||(25007495-25007561)
chr1 (38-77)||(9768819-9768858)
chr1 (43-77)||(14262736-14262770)
chr1 (39-77)||(19424092-19424130)
chr1 (143-204)||(14727419-14727480)
chr1 (143-204)||(25007553-25007614)
chr1 (143-204)||(27583978-27584039)
chr1 (143-204)||(37153955-37154016)
chr1 (143-204)||(44305501-44305562)
chr1 (38-75)||(50199486-50199523)
chr1 (38-74)||(9769590-9769626)
chr1 (43-75)||(37203236-37203268)
chr1 (39-75)||(37733803-37733839)
chr1 (38-77)||(2903037-2903076)
chr1 (42-77)||(29491516-29491551)
chr1 (39-74)||(32635189-32635224)
chr1 (38-77)||(41677106-41677145)
chr1 (38-77)||(48260199-48260238)
chr1 (22-75)||(32711133-32711191)
chr1 (42-76)||(33844664-33844698)
chr1 (42-76)||(33949280-33949314)
chr1 (39-77)||(49251406-49251444)
chr1 (143-204)||(1428384-1428445)
chr1 (38-75)||(3341746-3341783)
chr1 (38-75)||(9976394-9976431)
chr1 (42-75)||(17350109-17350142)
chr1 (39-76)||(27745204-27745241)
chr1 (40-77)||(41833547-41833584)
chr1 (42-74)||(12553243-12553275)
chr1 (43-75)||(15368853-15368885)
chr1 (43-75)||(17871096-17871128)
chr1 (43-75)||(24134639-24134671)
chr1 (39-75)||(24168590-24168626)
chr1 (39-75)||(29332332-29332368)
[»] scaffold0021 (2 HSPs)
scaffold0021 (178-327)||(112184-112333)
scaffold0021 (187-327)||(109275-109418)
[»] scaffold0638 (1 HSPs)
scaffold0638 (235-332)||(4102-4202)
[»] scaffold0191 (1 HSPs)
scaffold0191 (22-73)||(16896-16946)
[»] scaffold0075 (3 HSPs)
scaffold0075 (228-292)||(6942-7009)
scaffold0075 (228-292)||(11555-11622)
scaffold0075 (143-204)||(11613-11674)
[»] scaffold0618 (1 HSPs)
scaffold0618 (143-197)||(1792-1846)
[»] scaffold0343 (1 HSPs)
scaffold0343 (39-74)||(8609-8644)
[»] scaffold0219 (1 HSPs)
scaffold0219 (37-75)||(6642-6680)
[»] scaffold0178 (1 HSPs)
scaffold0178 (39-76)||(16112-16149)
[»] scaffold0119 (1 HSPs)
scaffold0119 (38-74)||(1088-1124)
[»] scaffold0001 (1 HSPs)
scaffold0001 (43-75)||(419760-419792)


Alignment Details
Target: chr7 (Bit Score: 158; Significance: 6e-84; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 18 - 358
Target Start/End: Original strand, 28693828 - 28694198
Alignment:
Q  18 agcttagtggctagaattcacaaggtgaataagtagggtgtccggggttcgaaccccgacatacagtgacggagccagaaattttatagagcctgaacnn 117  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||  |      
T  28693828 agcttagtagctagaattcacaaggtgaataagtagggtgtccggggttcgaaccccggcatacagtgacggagccaggaattttatagagcctgggcaa 28693927  T
Q  118 nnnnnttattgcaaaactttacttc---------------ttcacatttcctgcagataacttcacaaatcctgcggatatatt----tttcctgcggat 198  Q
         |||| |||||||||||||||               |||||||||||| | ||||| |||||||||||||||||||  ||    ||||||||||||    
T  28693928 aaaaattatcgcaaaactttacttcctttctgcgaataatttcacatttcctccggataatttcacaaatcctgcggataatttcacatttcctgcggat 28694027  T
Q  199 cctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaaatctgcaggaa---catttcctgcagaatttacacaaaaatccgcagcta 295  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     ||||||||||||||||||||||||||||||||||    
T  28694028 cctaaaatcctatggtattacctcacctgggaacctaaatcctgggcaaaatctgcaggaaatgtgtttcctgcagaatttacacaaaaatccgcagcta 28694127  T
Q  296 aatccgtaggaaaaccttaaagttctagtaatggctga---------aaagaaagttggagctgagcctggg 358  Q
    |||||| ||| |||  ||||||||||||||||||| ||         |||||||||||||||||||||||||    
T  28694128 aatccg-aggcaaagtttaaagttctagtaatggcggaacttgctacaaagaaagttggagctgagcctggg 28694198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 159 - 329
Target Start/End: Complemental strand, 3012477 - 3012304
Alignment:
Q  159 ataacttcacaaatcctgcggatatatttttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaaatctgcagga 258  Q
    |||| ||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||    
T  3012477 ataatttcacatttcctgcggatatatctttcctgcggatcctaaaatcctatggtattacctcacctgggaacctatatccttggcaaaatctgcagga 3012378  T
Q  259 a---catttcctgcagaatttacacaaaaatccgcagctaaatccgtaggaaaaccttaaagttctagtaatgg 329  Q
    |     |||||||| |||| |||||||||||| |||| |||||||| ||||||| || ||||||||||||||||    
T  3012377 agtgtgtttcctgcggaatgtacacaaaaatcggcaggtaaatccgcaggaaaagctaaaagttctagtaatgg 3012304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 150 - 297
Target Start/End: Original strand, 38128932 - 38129082
Alignment:
Q  150 ttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaaa 249  Q
    ||||||||||||| ||||||  ||||||  |||||| |||||||||||||||||||||||||| |||| |||||||| |||||||||||||| |||||||    
T  38128932 ttcctgcagataatttcacatttcctgcacatatatctttcctgcggatcctaaaatcctatgatattgcctcacctgggaacctaaatccttggcaaaa 38129031  T
Q  250 tctgcaggaa---catttcctgcagaatttacacaaaaatccgcagctaaa 297  Q
    | ||||||||     |||||| |||||||||||||||||||||||| ||||    
T  38129032 tatgcaggaaatgtgtttccttcagaatttacacaaaaatccgcaggtaaa 38129082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 187 - 360
Target Start/End: Complemental strand, 19377534 - 19377349
Alignment:
Q  187 tttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaaatctgcaggaa---catttcctgcagaatttacacaaa 283  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||    ||||||| | |||||| ||||||    
T  19377534 tttcctgcggatcctaaaatcctaaggtattacctcacctagggacctaaatccttggcaaaatctgcaggaaatgtatttccttcggaatttccacaaa 19377435  T
Q  284 aatccgcagctaaatccgtaggaaaaccttaaagttctagtaatggctg---------aaaagaaagttggagctgagcctgggct 360  Q
     |||||||| |||||| | | |||||  | ||| | |||||||||||||          |||||||||||||||||||||||||||    
T  19377434 catccgcaggtaaatctgcaagaaaagttaaaactactagtaatggctggagttgttacaaagaaagttggagctgagcctgggct 19377349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 187 - 329
Target Start/End: Complemental strand, 4843443 - 4843298
Alignment:
Q  187 tttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaaatctgcaggaa---catttcctgcagaatttacacaaa 283  Q
    |||||||||||||||||||||| |  |||||||||||||| |||||||||||||| ||||||||||||| |||     |||| ||| |||| ||||||||    
T  4843443 tttcctgcggatcctaaaatcccaatgtattacctcacctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatgtacacaaa 4843344  T
Q  284 aatccgcagctaaatccgtaggaaaaccttaaagttctagtaatgg 329  Q
     ||||| || |||||||| ||||||| || |||||||||| |||||    
T  4843343 tatccgtaggtaaatccgaaggaaaagctaaaagttctagaaatgg 4843298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 143 - 292
Target Start/End: Complemental strand, 21688299 - 21688146
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcc-tgcggatatatttttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcct 241  Q
    |||||||||||||||||||| ||||||  |   | ||||||||| ||||||||||||| |||||||||| ||||||| |||||||   ||||||||||||    
T  21688299 ttcacatttcctgcagataatttcacattttaatacggatatatctttcctgcggatcttaaaatcctaaggtattatctcacctgataacctaaatcct 21688200  T
Q  242 gggcaaaatctgcaggaa---catttcctgcagaatttacacaaaaatccgcag 292  Q
      ||||||||||||||||     |||||||| ||||||||||||||||||||||    
T  21688199 tcgcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaaaatccgcag 21688146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 228 - 329
Target Start/End: Original strand, 35300445 - 35300549
Alignment:
Q  228 ggaacctaaatcctgggcaaaatctgcaggaa---catttcctgcagaatttacacaaaaatccgcagctaaatccgtaggaaaaccttaaagttctagt 324  Q
    |||||||||||||| |||||||||||||||||   |||||||||| |||||||||||||||||||||| |||||||| ||||||| || ||  |||||||    
T  35300445 ggaacctaaatccttggcaaaatctgcaggaaatacatttcctgcggaatttacacaaaaatccgcaggtaaatccgcaggaaaagctaaacattctagt 35300544  T
Q  325 aatgg 329  Q
    |||||    
T  35300545 aatgg 35300549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 205 - 360
Target Start/End: Original strand, 41759602 - 41759769
Alignment:
Q  205 atcctatggtattacctcacctaggaacctaaatcctgggcaaaatctgcaggaa---catttcctgcagaatttacacaaaaatccgcagctaaatccg 301  Q
    |||||||||| |||||||| || |||||||||||||| |||||||||||||||||     |||||||| |||||||||| ||||||| ||  |||||| |    
T  41759602 atcctatggtgttacctcaactcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacaccaaaatccacaagtaaatctg 41759701  T
Q  302 taggaaaaccttaaagttctagtaatggctg---------aaaagaaagttggagctgagcctgggct 360  Q
     | ||||| || |||||||||||||||||||          |||||||||||||||||||||||||||    
T  41759702 caagaaaagctaaaagttctagtaatggctgggcttgctacaaagaaagttggagctgagcctgggct 41759769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 174 - 289
Target Start/End: Original strand, 814948 - 815066
Alignment:
Q  174 ctgcggatatatttttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaaatctgcaggaa---catttcctgca 270  Q
    |||||||||||| |||| ||| ||||||||||| ||| ||||||||||||| | ||||||||||| || ||||||||||||| |||    |||| ||||     
T  814948 ctgcggatatatctttcgtgcagatcctaaaattctaaggtattacctcacttgggaacctaaattcttggcaaaatctgcaagaaatgtattttctgcg 815047  T
Q  271 gaatttacacaaaaatccg 289  Q
    |||||||||||||||||||    
T  815048 gaatttacacaaaaatccg 815066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 228 - 329
Target Start/End: Original strand, 26722955 - 26723059
Alignment:
Q  228 ggaacctaaatcctgggcaaaatctgcaggaaca---tttcctgcagaatttacacaaaaatccgcagctaaatccgtaggaaaaccttaaagttctagt 324  Q
    |||||||||||||| | |||||||||||||||     |||||||| ||||||||| |||||||||||| |||||||||||||||| || ||| |||||||    
T  26722955 ggaacctaaatccttgacaaaatctgcaggaaatgtgtttcctgcggaatttacataaaaatccgcaggtaaatccgtaggaaaagctaaaatttctagt 26723054  T
Q  325 aatgg 329  Q
    |||||    
T  26723055 aatgg 26723059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 192 - 283
Target Start/End: Original strand, 21932760 - 21932854
Alignment:
Q  192 tgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaaatctgcaggaa---catttcctgcagaatttacacaaa 283  Q
    ||||||||| ||||||||||||||||||||||||| | |||||||||||| | |||||||||||||||     |||||||| |||||||||||||    
T  21932760 tgcggatccaaaaatcctatggtattacctcacctggaaacctaaatccttgacaaaatctgcaggaaatgtgtttcctgcggaatttacacaaa 21932854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 256
Target Start/End: Original strand, 42439540 - 42439619
Alignment:
Q  177 cggatatatttttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaaatctgcag 256  Q
    ||||||||| |||| | || || ||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  42439540 cggatatatctttcatacgcattctaaaattctatggtattacctctcctaggaacctaaatccttggcaaaatctgcag 42439619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 172 - 251
Target Start/End: Original strand, 41862319 - 41862398
Alignment:
Q  172 tcctgcggatatatttttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaaatc 251  Q
    |||||||||||||  ||||||| |||||||||||||||| |||| ||||||| ||  ||||||||||||| |||||||||    
T  41862319 tcctgcggatatacctttcctgtggatcctaaaatcctaaggtaatacctcatctgagaacctaaatccttggcaaaatc 41862398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 329
Target Start/End: Original strand, 7873232 - 7873329
Alignment:
Q  235 aaatcctgggcaaaatctgcaggaaca---tttcctgcagaatttacacaaaaatccgcagctaaatccgtaggaaaaccttaaagttctagtaatgg 329  Q
    ||||||| |||||||||||||||||     |||||||| ||||||||| ||||| |||||| |||||||| || |||| || ||||||||||||||||    
T  7873232 aaatcctaggcaaaatctgcaggaaatgtgtttcctgcggaatttacataaaaacccgcaggtaaatccgcagaaaaagctaaaagttctagtaatgg 7873329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 204
Target Start/End: Original strand, 35300393 - 35300454
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaa 204  Q
    |||||||||||||||||||| ||||||  |||| ||||||||| ||||||||||| ||||||    
T  35300393 ttcacatttcctgcagataaattcacatttcctacggatatatctttcctgcggaacctaaa 35300454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 235 - 332
Target Start/End: Original strand, 5991432 - 5991529
Alignment:
Q  235 aaatcctgggcaaaatctgcaggaaca---tttcctgcagaatttacacaaaaatccgcagctaaatccgtaggaaaaccttaaagttctagtaatggct 331  Q
    ||||||| |||||||||||||||||     |||||||| ||||||||| |||   |||||| |||||||| ||||||| || ||||||||||||||||||    
T  5991432 aaatcctaggcaaaatctgcaggaaatgtgtttcctgcggaatttacataaa---ccgcaggtaaatccgcaggaaaaactaaaagttctagtaatggct 5991528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 39 - 75
Target Start/End: Complemental strand, 47552297 - 47552261
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||||||||||||||||||||||||||||||    
T  47552297 aaggtgaataagtagggtgtccggggttcgaaccccg 47552261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 77
Target Start/End: Complemental strand, 11808122 - 11808084
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  11808122 aaggtgaataagtggggtgtccggggttcgaaccccgac 11808084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 21285342 - 21285400
Alignment:
Q  22 tagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||||||||||     ||||||||||||| |||||||||||||||||||||||    
T  21285342 tagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccg 21285400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 204
Target Start/End: Original strand, 23704437 - 23704495
Alignment:
Q  146 acatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaa 204  Q
    ||||||||||||||||| ||||||  |||| ||||||||| ||||||||||| ||||||    
T  23704437 acatttcctgcagataatttcacatttcctacggatatatctttcctgcggaacctaaa 23704495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 29658261 - 29658319
Alignment:
Q  22 tagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||||||||||     ||||||||||||| |||||||||||||||||||||||    
T  29658261 tagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccg 29658319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 77
Target Start/End: Original strand, 33248817 - 33248851
Alignment:
Q  43 tgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||||||||||||||||||||||||||||    
T  33248817 tgaataagtagggtgtccggggttcgaaccccgac 33248851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 77
Target Start/End: Complemental strand, 43635672 - 43635634
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  43635672 aaggtgaataagtggggtgtccggggttcgaaccccgac 43635634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 74
Target Start/End: Complemental strand, 14707376 - 14707341
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaacccc 74  Q
    ||||||||||||| ||||||||||||||||||||||    
T  14707376 aaggtgaataagtggggtgtccggggttcgaacccc 14707341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 34948212 - 34948157
Alignment:
Q  22 tagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaacc 72  Q
    |||||||||||||||||     ||||||||||||| ||||||||||||||||||||    
T  34948212 tagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaacc 34948157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 38792323 - 38792268
Alignment:
Q  17 cagcttagtggctagaattcac-----aaggtgaataagtagggtgtccggggttc 67  Q
    |||| |||||||||||||||||     |||||||||||||||||||||||||||||    
T  38792323 cagcctagtggctagaattcaccttataaggtgaataagtagggtgtccggggttc 38792268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 4169182 - 4169124
Alignment:
Q  22 tagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||||||||||     ||||||||||||| ||||||||||||||| |||||||    
T  4169182 tagtggctagaattcactttataaggtgaataagtggggtgtccggggttcaaaccccg 4169124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 332
Target Start/End: Complemental strand, 5850790 - 5850724
Alignment:
Q  266 ctgcagaatttacacaaaaatccgcagctaaatccgtaggaaaaccttaaagttctagtaatggctg 332  Q
    ||||||||||||||||| | || |||| |||||||| |||||||  | ||| |||||||||||||||    
T  5850790 ctgcagaatttacacaacattctgcagataaatccgcaggaaaagttaaaacttctagtaatggctg 5850724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 74
Target Start/End: Complemental strand, 10958116 - 10958082
Alignment:
Q  40 aggtgaataagtagggtgtccggggttcgaacccc 74  Q
    |||||||||||| ||||||||||||||||||||||    
T  10958116 aggtgaataagtggggtgtccggggttcgaacccc 10958082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 77
Target Start/End: Complemental strand, 30152825 - 30152787
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  30152825 aaggtgaataagtggggtgttcggggttcgaaccccgac 30152787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 77
Target Start/End: Complemental strand, 31793548 - 31793514
Alignment:
Q  43 tgaataagtagggtgtccggggttcgaaccccgac 77  Q
    ||||||||| |||||||||||||||||||||||||    
T  31793548 tgaataagtggggtgtccggggttcgaaccccgac 31793514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 33202543 - 33202601
Alignment:
Q  22 tagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||||||||||     ||| ||||||||| |||||||||||||||||||||||    
T  33202543 tagtggctagaattcaccttataagatgaataagtggggtgtccggggttcgaaccccg 33202601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 75
Target Start/End: Original strand, 28914891 - 28914924
Alignment:
Q  42 gtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||| |||||||||||||||||||||||    
T  28914891 gtgaataagtggggtgtccggggttcgaaccccg 28914924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 2261495 - 2261531
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  2261495 aaggtgaataagttgggtgtccgggattcgaaccccg 2261531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 8725149 - 8725185
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  8725149 aaggtgaataagtggggtgttcggggttcgaaccccg 8725185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 75
Target Start/End: Complemental strand, 14102545 - 14102509
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  14102545 aaggtgaataagtggggtgtccggggttcaaaccccg 14102509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 75
Target Start/End: Complemental strand, 14412562 - 14412526
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  14412562 aaggtgaataagtggggtgtccggggttcaaaccccg 14412526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 36315985 - 36316021
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||||||| ||||||||| |||||||||||||    
T  36315985 aaggtgaataagtggggtgtccgaggttcgaaccccg 36316021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 40273901 - 40273869
Alignment:
Q  43 tgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||| |||||||||||||||||||||||    
T  40273901 tgaataagtggggtgtccggggttcgaaccccg 40273869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 2e-49; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 143 - 329
Target Start/End: Original strand, 2836132 - 2836321
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctg 242  Q
    |||||||||||||||||||| ||||||  |||||  |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||     
T  2836132 ttcacatttcctgcagataatttcacatttcctgtcgatatacttttcctgcggatcctaaaatcctatggtattacctcacctgggaacctaaatcctt 2836231  T
Q  243 ggcaaaatctgcaggaa---catttcctgcagaatttacacaaaaatccgcagctaaatccgtaggaaaaccttaaagttctagtaatgg 329  Q
    | |||||||||||||||    ||||||||| |||||||||| ||||||||||| | |||||| || |||| || |||||||||| |||||    
T  2836232 gacaaaatctgcaggaaatgtatttcctgcggaatttacacgaaaatccgcagatcaatccgcagaaaaagctaaaagttctaggaatgg 2836321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 228 - 329
Target Start/End: Complemental strand, 15529045 - 15528941
Alignment:
Q  228 ggaacctaaatcctgggcaaaatctgcaggaa---catttcctgcagaatttacacaaaaatccgcagctaaatccgtaggaaaaccttaaagttctagt 324  Q
    |||||||||||||| |||||||||||||||||   |||||||||| ||||||||||||| |||||||| |||||||| ||||||| || ||| ||||| |    
T  15529045 ggaacctaaatccttggcaaaatctgcaggaaatacatttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaaattctaat 15528946  T
Q  325 aatgg 329  Q
    |||||    
T  15528945 aatgg 15528941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 228 - 328
Target Start/End: Complemental strand, 9696154 - 9696051
Alignment:
Q  228 ggaacctaaatcctgggcaaaatctgcaggaaca---tttcctgcagaatttacacaaaaatccgcagctaaatccgtaggaaaaccttaaagttctagt 324  Q
    |||||||||||||| |||||||||||||||||     |||||||| ||||||||||||||||| |||| |||||||| ||||||| || ||| ||||| |    
T  9696154 ggaacctaaatccttggcaaaatctgcaggaaatatgtttcctgcggaatttacacaaaaatctgcaggtaaatccgcaggaaaatctaaaaattctaat 9696055  T
Q  325 aatg 328  Q
    ||||    
T  9696054 aatg 9696051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 271 - 331
Target Start/End: Original strand, 28614434 - 28614494
Alignment:
Q  271 gaatttacacaaaaatccgcagctaaatccgtaggaaaaccttaaagttctagtaatggct 331  Q
    ||||||||| |||||||||||| ||||||||||||||||  | ||||||||||||||||||    
T  28614434 gaatttacataaaaatccgcaggtaaatccgtaggaaaagttaaaagttctagtaatggct 28614494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 339448 - 339371
Alignment:
Q  214 tattacctcacctaggaacctaaatcctgggcaaaatctgcaggaa---catttcctgcagaatttacacaaaaatcc 288  Q
    ||||||||||||| |||||||||||||| || ||||||||||||||    ||||||| | ||||||||||||||||||    
T  339448 tattacctcacctgggaacctaaatccttggtaaaatctgcaggaaatgtatttcctacggaatttacacaaaaatcc 339371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 228 - 329
Target Start/End: Original strand, 9046932 - 9047036
Alignment:
Q  228 ggaacctaaatcctgggcaaaatctgcaggaaca---tttcctgcagaatttacacaaaaatccgcagctaaatccgtaggaaaaccttaaagttctagt 324  Q
    |||||||||||||| | |||||||||||||||     |||||||| |||| ||||||||||||  ||| |||||||| ||||||| || ||| |||||||    
T  9046932 ggaacctaaatccttgacaaaatctgcaggaaatgtgtttcctgcggaatctacacaaaaatctacaggtaaatccgcaggaaaagctaaaaattctagt 9047031  T
Q  325 aatgg 329  Q
    |||||    
T  9047032 aatgg 9047036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 9696206 - 9696145
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaa 204  Q
    |||||||||||||||||||| ||||||  |||| ||||||||| ||||||||||| ||||||    
T  9696206 ttcacatttcctgcagataatttcacatttcctacggatatatctttcctgcggaacctaaa 9696145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 328
Target Start/End: Complemental strand, 15122142 - 15122039
Alignment:
Q  228 ggaacctaaatcctgggcaaaatctgcaggaaca---tttcctgcagaatttacacaaaaatccgcagctaaatccgtaggaaaaccttaaagttctagt 324  Q
    ||||| |||||||| |||||||||||||||||     |||||||||||||||| ||| |||||||||| |||||||| || |||| || ||| ||||| |    
T  15122142 ggaacgtaaatccttggcaaaatctgcaggaaatgtgtttcctgcagaatttagacacaaatccgcaggtaaatccgcagaaaaagctaaaaattctaat 15122043  T
Q  325 aatg 328  Q
    ||||    
T  15122042 aatg 15122039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 292
Target Start/End: Original strand, 34249030 - 34249097
Alignment:
Q  228 ggaacctaaatcctgggcaaaatctgcaggaaca---tttcctgcagaatttacacaaaaatccgcag 292  Q
    |||||||||| ||| |||||||||||||||||     |||||||||||||||||||||||||||||||    
T  34249030 ggaacctaaacccttggcaaaatctgcaggaaatgtgtttcctgcagaatttacacaaaaatccgcag 34249097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 220
Target Start/End: Original strand, 31188312 - 31188354
Alignment:
Q  178 ggatatatttttcctgcggatcctaaaatcctatggtattacc 220  Q
    |||||||| |||||||||||||||||||||||| |||||||||    
T  31188312 ggatatatctttcctgcggatcctaaaatcctaaggtattacc 31188354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 34188922 - 34188856
Alignment:
Q  187 tttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaaatctg 253  Q
    |||||||||||||||||||||||| |||||||| ||||||  ||| ||||||| | || ||||||||    
T  34188922 tttcctgcggatcctaaaatcctaaggtattacttcacctgagaatctaaatcattggtaaaatctg 34188856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 2941373 - 2941312
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaa 204  Q
    |||||||||||||||||||| ||||||  |||| ||||||||| |||| |||||| ||||||    
T  2941373 ttcacatttcctgcagataatttcacatttcctacggatatatctttcatgcggaacctaaa 2941312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 15529097 - 15529036
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaa 204  Q
    |||||||||||||||||||| ||||||  |||| | ||||||| ||||||||||| ||||||    
T  15529097 ttcacatttcctgcagataaattcacatttcctacagatatatctttcctgcggaacctaaa 15529036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 6455538 - 6455502
Alignment:
Q  38 caaggtgaataagtagggtgtccggggttcgaacccc 74  Q
    ||||||||||||||||||||||||| |||||||||||    
T  6455538 caaggtgaataagtagggtgtccggagttcgaacccc 6455502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 9491746 - 9491782
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||||||| |||||||||||||||||||||||    
T  9491746 aaggtgaataagtggggtgtccggggttcgaaccccg 9491782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 71
Target Start/End: Complemental strand, 12101970 - 12101938
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaac 71  Q
    |||||||||||||||||||||||||||||||||    
T  12101970 aaggtgaataagtagggtgtccggggttcgaac 12101938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 25020517 - 25020573
Alignment:
Q  22 tagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaaccc 73  Q
    |||||||||||||||||     ||||||||||||| |||||||||||||||||||||    
T  25020517 tagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccc 25020573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 70
Target Start/End: Original strand, 3591340 - 3591371
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaa 70  Q
    ||||||||||||||||||||||||||||||||    
T  3591340 aaggtgaataagtagggtgtccggggttcgaa 3591371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 77
Target Start/End: Complemental strand, 30833102 - 30833063
Alignment:
Q  38 caaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    ||||| |||||||| |||||||||||||||||||||||||    
T  30833102 caaggagaataagtggggtgtccggggttcgaaccccgac 30833063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 12089203 - 12089149
Alignment:
Q  22 tagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaac 71  Q
    |||||||||||||||||     ||||||||||||| |||||||||||||||||||    
T  12089203 tagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaac 12089149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 77
Target Start/End: Original strand, 20568268 - 20568306
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  20568268 aaggtgaataagtggggtgttcggggttcgaaccccgac 20568306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 76
Target Start/End: Complemental strand, 29284199 - 29284165
Alignment:
Q  42 gtgaataagtagggtgtccggggttcgaaccccga 76  Q
    |||||||||| ||||||||||||||||||||||||    
T  29284199 gtgaataagtggggtgtccggggttcgaaccccga 29284165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 31200137 - 31200199
Alignment:
Q  158 gataacttcacaaatcctgcggatatatttttcctgcggatcctaaaatcctatggtattacc 220  Q
    ||||| ||||||  |||||| ||||||| || ||||||||| ||||||||||| |||||||||    
T  31200137 gataatttcacatttcctgcagatatatcttacctgcggattctaaaatcctaaggtattacc 31200199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 204
Target Start/End: Original strand, 9046880 - 9046941
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaa 204  Q
    |||||||||||||||||||| ||||||  |||| | ||||||| |||| |||||| ||||||    
T  9046880 ttcacatttcctgcagataatttcacatttcctacagatatatatttcttgcggaacctaaa 9046941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 75
Target Start/End: Original strand, 19680258 - 19680295
Alignment:
Q  38 caaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  19680258 caaggagaataagtggggtgtccggggttcgaaccccg 19680295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 77
Target Start/End: Complemental strand, 22997414 - 22997385
Alignment:
Q  48 aagtagggtgtccggggttcgaaccccgac 77  Q
    ||||||||||||||||||||||||||||||    
T  22997414 aagtagggtgtccggggttcgaaccccgac 22997385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 77
Target Start/End: Original strand, 23790987 - 23791016
Alignment:
Q  48 aagtagggtgtccggggttcgaaccccgac 77  Q
    ||||||||||||||||||||||||||||||    
T  23790987 aagtagggtgtccggggttcgaaccccgac 23791016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 75
Target Start/End: Complemental strand, 30938476 - 30938439
Alignment:
Q  38 caaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||| |||||||||||||||| |||||||||||||||    
T  30938476 caaggagaataagtagggtgtctggggttcgaaccccg 30938439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 3448432 - 3448400
Alignment:
Q  43 tgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||| |||||||||||||||||||||||    
T  3448432 tgaataagtggggtgtccggggttcgaaccccg 3448400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 75
Target Start/End: Original strand, 4854321 - 4854353
Alignment:
Q  43 tgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||| |||||||||||||||||||||||    
T  4854321 tgaataagtggggtgtccggggttcgaaccccg 4854353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 5641701 - 5641737
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  5641701 aaggtgaataagtggggtgtccggagttcgaaccccg 5641737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 75
Target Start/End: Original strand, 6228275 - 6228307
Alignment:
Q  43 tgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||| |||||||||||||||||||||||    
T  6228275 tgaataagtggggtgtccggggttcgaaccccg 6228307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 6658554 - 6658590
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||| |||||||| |||||||||||||||||||||||    
T  6658554 aaggagaataagtggggtgtccggggttcgaaccccg 6658590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 71
Target Start/End: Original strand, 7720514 - 7720546
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaac 71  Q
    ||||||||||||| |||||||||||||||||||    
T  7720514 aaggtgaataagtggggtgtccggggttcgaac 7720546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 9422918 - 9422882
Alignment:
Q  38 caaggtgaataagtagggtgtccggggttcgaacccc 74  Q
    |||||||||||||| |||||||||| |||||||||||    
T  9422918 caaggtgaataagtggggtgtccggtgttcgaacccc 9422882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 75
Target Start/End: Original strand, 18903382 - 18903414
Alignment:
Q  43 tgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||| |||||||||||||||||||||||    
T  18903382 tgaataagtggggtgtccggggttcgaaccccg 18903414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 22983660 - 22983628
Alignment:
Q  43 tgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||| |||||||||||||||||||||||    
T  22983660 tgaataagtggggtgtccggggttcgaaccccg 22983628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 75
Target Start/End: Original strand, 23804748 - 23804780
Alignment:
Q  43 tgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||| |||||||||||||||||||||||    
T  23804748 tgaataagtggggtgtccggggttcgaaccccg 23804780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 26669669 - 26669705
Alignment:
Q  38 caaggtgaataagtagggtgtccggggttcgaacccc 74  Q
    |||||||||||||| ||||||| ||||||||||||||    
T  26669669 caaggtgaataagtggggtgtctggggttcgaacccc 26669705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 74
Target Start/End: Original strand, 33628955 - 33628987
Alignment:
Q  42 gtgaataagtagggtgtccggggttcgaacccc 74  Q
    |||||||||| ||||||||||||||||||||||    
T  33628955 gtgaataagtggggtgtccggggttcgaacccc 33628987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 35190869 - 35190809
Alignment:
Q  22 tagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||||||||||     ||||||||||||| |||||| |||||||||||| |||||    
T  35190869 tagtggctagaattcaccttataaggtgaataagtggggtgttcggggttcgaactccgac 35190809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 9e-49; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 143 - 292
Target Start/End: Complemental strand, 15504099 - 15503947
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctg 242  Q
    |||||||||||||||||||| ||||||  |||||||||||||| ||||| ||||||||||||||||||||||||||||||| || ||||||||||||||     
T  15504099 ttcacatttcctgcagataatttcacatttcctgcggatatatctttcccgcggatcctaaaatcctatggtattacctcatctgggaacctaaatcctt 15504000  T
Q  243 ggcaaaatctgcaggaa---catttcctgcagaatttacacaaaaatccgcag 292  Q
    |||||||||||||||||     |||||||||||||||||||||||||||||||    
T  15503999 ggcaaaatctgcaggaaatgtgtttcctgcagaatttacacaaaaatccgcag 15503947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 154 - 359
Target Start/End: Original strand, 17192601 - 17192818
Alignment:
Q  154 tgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaaatctg 253  Q
    ||||||||| ||||||  | ||||| |||||| |||||||||||||||||||||| |||||||||||||| || |||||||||||||| | |||||||||    
T  17192601 tgcagataatttcacattttctgcgaatatatctttcctgcggatcctaaaatccaatggtattacctcatctgggaacctaaatccttgacaaaatctg 17192700  T
Q  254 caggaa---catttcctgcagaatttacacaaaaatccgcagctaaatccgtaggaaaaccttaaagttctagtaatggctga---------aaagaaag 341  Q
    ||||||    ||||||||| ||||| |||||||||||||| | |||||||| ||||| | || ||||||||||||||||||||         ||||||||    
T  17192701 caggaaatgtatttcctgcggaattgacacaaaaatccgccggtaaatccgcaggaagagctaaaagttctagtaatggctgagcttgctacaaagaaag 17192800  T
Q  342 ttggagctgagcctgggc 359  Q
    ||||||||||||||||||    
T  17192801 ttggagctgagcctgggc 17192818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 187 - 332
Target Start/End: Original strand, 16667458 - 16667606
Alignment:
Q  187 tttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaaatctgcaggaa---catttcctgcagaatttacacaaa 283  Q
    |||| ||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||     |||||||| |||||||||||||    
T  16667458 tttcttgcggatcctaaaatcctatggtattacctcacatgggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaa 16667557  T
Q  284 aatccgcagctaaatccgtaggaaaaccttaaagttctagtaatggctg 332  Q
    ||||||||| |||||||| ||||||| || |||||||||||||||||||    
T  16667558 aatccgcaggtaaatccgcaggaaaagctaaaagttctagtaatggctg 16667606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 150 - 329
Target Start/End: Complemental strand, 21069185 - 21069003
Alignment:
Q  150 ttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaaa 249  Q
    |||||| | |||| ||||||  |||||| ||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||| | |||||||    
T  21069185 ttcctggaaataatttcacatttcctgcagatatatctttcctgtggatcctaaaatcctatggtataacctcacctaggaacctaaatctttggcaaaa 21069086  T
Q  250 tctgcaggaa---catttcctgcagaatttacacaaaaatccgcagctaaatccgtaggaaaaccttaaagttctagtaatgg 329  Q
    ||||||||||     |||| ||| |||| ||||||||||| ||||| |||||||| ||||||  || ||| ||||||||||||    
T  21069085 tctgcaggaaatgtgtttcttgcggaatatacacaaaaatgcgcaggtaaatccgcaggaaaggctaaaaattctagtaatgg 21069003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 187 - 327
Target Start/End: Original strand, 12267374 - 12267517
Alignment:
Q  187 tttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaaatctgcaggaa---catttcctgcagaatttacacaaa 283  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||| |  |||||||||| ||||||     |||| ||| ||||||||| |||    
T  12267374 tttcctgcggatcctaaaatcctatggtattacctcacctacgaatctaaattcgtggcaaaatctacaggaaatgtgtttcttgcggaatttacataaa 12267473  T
Q  284 aatccgcagctaaatccgtaggaaaaccttaaagttctagtaat 327  Q
    ||||||||| |||||||  ||||||| || ||||||||||||||    
T  12267474 aatccgcaggtaaatccacaggaaaagctaaaagttctagtaat 12267517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 174 - 259
Target Start/End: Original strand, 8214615 - 8214700
Alignment:
Q  174 ctgcggatatatttttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaaatctgcaggaa 259  Q
    |||||||||||| ||||||||||||||||||||||||  ||||||||||||||| ||||||||||||| | |||||||||||||||    
T  8214615 ctgcggatatatctttcctgcggatcctaaaatcctaaagtattacctcacctaagaacctaaatccttgacaaaatctgcaggaa 8214700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 187 - 291
Target Start/End: Original strand, 36234547 - 36234654
Alignment:
Q  187 tttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaaatctgcaggaa---catttcctgcagaatttacacaaa 283  Q
    ||||||||||||||||||||  |||||||| ||||||||||||||| |||| ||| || ||||||||||||||   | |||||||| ||||||||| |||    
T  36234547 tttcctgcggatcctaaaatgttatggtatcacctcacctaggaacttaaacccttggtaaaatctgcaggaaatgcgtttcctgctgaatttacataaa 36234646  T
Q  284 aatccgca 291  Q
    ||||||||    
T  36234647 aatccgca 36234654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 143 - 259
Target Start/End: Complemental strand, 6900917 - 6900801
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctg 242  Q
    |||||||||||||| ||||| ||||||  || ||||||||||| ||||| ||||||||||||||||||   ||||| || | || ||||||||||||||     
T  6900917 ttcacatttcctgcggataatttcacatttcttgcggatatatctttcccgcggatcctaaaatcctaaaatattatctaatctgggaacctaaatcctt 6900818  T
Q  243 ggcaaaatctgcaggaa 259  Q
    | |||||||||||||||    
T  6900817 gacaaaatctgcaggaa 6900801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 187 - 332
Target Start/End: Original strand, 13942744 - 13942895
Alignment:
Q  187 tttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaaatctgcaggaa------catttcctgcagaatttacac 280  Q
    |||||||||||||||||||||||| |||||||||||||||   || ||||||||| |||||||||||||||||        |||  ||  |||| |||||    
T  13942744 tttcctgcggatcctaaaatcctaaggtattacctcacctgataatctaaatccttggcaaaatctgcaggaaatgtggtgtttattgtggaatctacac 13942843  T
Q  281 aaaaatccgcagctaaatccgtaggaaaaccttaaagttctagtaatggctg 332  Q
    ||||||| |||| |||||| ||||||||| || ||||||||||||| |||||    
T  13942844 aaaaatctgcaggtaaatcggtaggaaaagctcaaagttctagtaaaggctg 13942895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 187 - 326
Target Start/End: Complemental strand, 767421 - 767283
Alignment:
Q  187 tttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaaatctgcaggaa---catttcctgcagaatttacacaaa 283  Q
    |||||||| ||||||||||||||| ||||||||||||||| |||| ||||||||| ||||||| ||| |||||     |||||||| ||||||| |||||    
T  767421 tttcctgcagatcctaaaatcctaaggtattacctcacctgggaatctaaatccttggcaaaacctgtaggaaatgtgtttcctgcggaatttatacaaa 767322  T
Q  284 aatccgcagctaaatccgtaggaaaaccttaaagttctagtaa 326  Q
    ||||||    |||||||| ||||||| || |||||||| ||||    
T  767321 aatccg----taaatccgcaggaaaagctaaaagttcttgtaa 767283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 235 - 332
Target Start/End: Original strand, 43228655 - 43228755
Alignment:
Q  235 aaatcctgggcaaaatctgcaggaaca---tttcctgcagaatttacacaaaaatccgcagctaaatccgtaggaaaaccttaaagttctagtaatggct 331  Q
    ||||||| |||||||||||||||||     |||||||| ||||||||| ||| |||||||| |||||||||||||||| || ||||||||||||||||||    
T  43228655 aaatcctaggcaaaatctgcaggaaatgtgtttcctgcggaatttacataaacatccgcaggtaaatccgtaggaaaagctaaaagttctagtaatggct 43228754  T
Q  332 g 332  Q
    |    
T  43228755 g 43228755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 332
Target Start/End: Original strand, 32953680 - 32953780
Alignment:
Q  235 aaatcctgggcaaaatctgcaggaaca---tttcctgcagaatttacacaaaaatccgcagctaaatccgtaggaaaaccttaaagttctagtaatggct 331  Q
    ||||||| |||||||||||||||||     |||||| | ||||||||| ||||||  |||| |||||||||||||||| || ||||||||||||||||||    
T  32953680 aaatcctaggcaaaatctgcaggaaatgtgtttcctacggaatttacataaaaatttgcaggtaaatccgtaggaaaagctaaaagttctagtaatggct 32953779  T
Q  332 g 332  Q
    |    
T  32953780 g 32953780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 228 - 309
Target Start/End: Complemental strand, 33007005 - 33006921
Alignment:
Q  228 ggaacctaaatcctgggcaaaatctgcaggaaca---tttcctgcagaatttacacaaaaatccgcagctaaatccgtaggaaaa 309  Q
    |||||||||||||| |||||||||||||||||     |||||| | |||||||||||||||||||||| |||||||| |||||||    
T  33007005 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctacggaatttacacaaaaatccgcaggtaaatccgcaggaaaa 33006921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 228 - 329
Target Start/End: Complemental strand, 15675411 - 15675307
Alignment:
Q  228 ggaacctaaatcctgggcaaaatctgcaggaaca---tttcctgcagaatttacacaaaaatccgcagctaaatccgtaggaaaaccttaaagttctagt 324  Q
    ||||| |||||||| |||||||||||||||||     |||||||| |||||||||||||| ||||||| |||||||| || ||||  | ||| |||||||    
T  15675411 ggaacttaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaaactccgcaggtaaatccgcagaaaaagttaaaaattctagt 15675312  T
Q  325 aatgg 329  Q
    |||||    
T  15675311 aatgg 15675307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 228 - 329
Target Start/End: Complemental strand, 34846465 - 34846361
Alignment:
Q  228 ggaacctaaatcctgggcaaaatctgcaggaaca---tttcctgcagaatttacacaaaaatccgcagctaaatccgtaggaaaaccttaaagttctagt 324  Q
    |||||||||||||| ||||||||||| |||||     ||| |||| ||||||||||||||||||| || |||||||| |||| || || ||| |||||||    
T  34846465 ggaacctaaatccttggcaaaatctgtaggaaatgtgtttactgcggaatttacacaaaaatccggaggtaaatccgcaggataagctaaaaattctagt 34846366  T
Q  325 aatgg 329  Q
    |||||    
T  34846365 aatgg 34846361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 2476515 - 2476454
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaa 204  Q
    |||||||||||||||||||| ||||||  |||| ||||||||| ||||||||||| ||||||    
T  2476515 ttcacatttcctgcagataaattcacatttcctacggatatatctttcctgcggaacctaaa 2476454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 292
Target Start/End: Complemental strand, 34444064 - 34443997
Alignment:
Q  228 ggaacctaaatcctgggcaaaatctgcaggaa---catttcctgcagaatttacacaaaaatccgcag 292  Q
    |||||||||||||| |||||||||||||||||   |||||| ||| ||||||| ||||||||||||||    
T  34444064 ggaacctaaatccttggcaaaatctgcaggaaatgcatttcttgcggaatttagacaaaaatccgcag 34443997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 34444116 - 34444055
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaa 204  Q
    |||||||||||||||||||| ||||||  |||| ||||||||| ||||||||||| ||||||    
T  34444116 ttcacatttcctgcagataaattcacatttcctacggatatatctttcctgcggaacctaaa 34444055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 18872625 - 18872567
Alignment:
Q  22 tagtggctagaattcac---aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||||||||||   ||||||||||||| |||||| ||||||||||||||||||    
T  18872625 tagtggctagaattcaccttaaggtgaataagtggggtgttcggggttcgaaccccgac 18872567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 332
Target Start/End: Original strand, 7162096 - 7162196
Alignment:
Q  235 aaatcctgggcaaaatctgcaggaaca---tttcctgcagaatttacacaaaaatccgcagctaaatccgtaggaaaaccttaaagttctagtaatggct 331  Q
    ||||||| |||||||||||||||||     |||||||  ||||||||| |||||||| ||| |||||||| ||||||| || ||| || |||||||||||    
T  7162096 aaatcctaggcaaaatctgcaggaaatgtgtttcctgtggaatttacataaaaatcctcaggtaaatccgcaggaaaagctaaaatttttagtaatggct 7162195  T
Q  332 g 332  Q
    |    
T  7162196 g 7162196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 197
Target Start/End: Original strand, 14832776 - 14832830
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcgga 197  Q
    |||||||||||||||||||| ||||||  |||| ||||||||| |||||||||||    
T  14832776 ttcacatttcctgcagataatttcacatttcctacggatatatctttcctgcgga 14832830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 39605815 - 39605853
Alignment:
Q  172 tcctgcggatatatttttcctgcggatcctaaaatccta 210  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  39605815 tcctgcggatatatctttcctgcggatcctaaaatccta 39605853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 30249115 - 30249054
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaa 204  Q
    ||||||||| |||||||||| ||||||  |||| ||||||||| ||||||||||| ||||||    
T  30249115 ttcacattttctgcagataatttcacatttcctacggatatatctttcctgcggaacctaaa 30249054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 35469053 - 35468992
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaa 204  Q
    |||||||||||||||||||| ||||||  | || ||||||||| ||||||||||| ||||||    
T  35469053 ttcacatttcctgcagataatttcacattttctacggatatatctttcctgcggaacctaaa 35468992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 843379 - 843415
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||||||| |||||||||||||||||||||||    
T  843379 aaggtgaataagtggggtgtccggggttcgaaccccg 843415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 3535947 - 3535983
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||||||| |||||||||||||||||||||||    
T  3535947 aaggtgaataagtggggtgtccggggttcgaaccccg 3535983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 75
Target Start/End: Complemental strand, 8015919 - 8015883
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||||||| |||||||||||||||||||||||    
T  8015919 aaggtgaataagtggggtgtccggggttcgaaccccg 8015883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 38618692 - 38618728
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||||||| |||||||||||||||||||||||    
T  38618692 aaggtgaataagtggggtgtccggggttcgaaccccg 38618728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 42 - 77
Target Start/End: Original strand, 4674829 - 4674864
Alignment:
Q  42 gtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||| |||||||||||||||||||||||||    
T  4674829 gtgaataagtggggtgtccggggttcgaaccccgac 4674864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 24205539 - 24205486
Alignment:
Q  22 tagtggctagaattcac---aaggtgaataagtagggtgtccggggttcgaacc 72  Q
    |||||||||||||||||   ||||| ||||||| ||||||||||||||||||||    
T  24205539 tagtggctagaattcaccttaaggtaaataagtggggtgtccggggttcgaacc 24205486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 77
Target Start/End: Complemental strand, 31556903 - 31556864
Alignment:
Q  38 caaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||||||| ||||||||||||||||||| |||||    
T  31556903 caaggtgaataagtggggtgtccggggttcgaactccgac 31556864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 42 - 77
Target Start/End: Original strand, 36045148 - 36045183
Alignment:
Q  42 gtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||| |||||||||||||||||||||||||    
T  36045148 gtgaataagtggggtgtccggggttcgaaccccgac 36045183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 37779728 - 37779665
Alignment:
Q  271 gaatttacacaaaaatccgcagctaaatccgtaggaaaaccttaaagttctagtaatggctgaa 334  Q
    ||||||||| ||| || ||||| |||||||| || |||| || |||||||||||||||||||||    
T  37779728 gaatttacataaatattcgcaggtaaatccgcagaaaaaactaaaagttctagtaatggctgaa 37779665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 77
Target Start/End: Complemental strand, 4985839 - 4985805
Alignment:
Q  43 tgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||||||||||| ||||||||||||||||    
T  4985839 tgaataagtagggtgtccagggttcgaaccccgac 4985805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 329
Target Start/End: Complemental strand, 9738440 - 9738378
Alignment:
Q  267 tgcagaatttacacaaaaatccgcagctaaatccgtaggaaaaccttaaagttctagtaatgg 329  Q
    ||||||||||||||||||||| |||| |||||||| ||||||  |   |||||||||||||||    
T  9738440 tgcagaatttacacaaaaatctgcaggtaaatccgcaggaaatgcgagaagttctagtaatgg 9738378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 10943822 - 10943764
Alignment:
Q  22 tagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||||||||||     || |||||||||| |||||||||||||||||||||||    
T  10943822 tagtggctagaattcactttttaaagtgaataagtggggtgtccggggttcgaaccccg 10943764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 77
Target Start/End: Original strand, 15106902 - 15106936
Alignment:
Q  43 tgaataagtagggtgtccggggttcgaaccccgac 77  Q
    ||||||||| |||||||||||||||||||||||||    
T  15106902 tgaataagtggggtgtccggggttcgaaccccgac 15106936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 15675463 - 15675409
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcgga 197  Q
    ||||||||||||| |||||| ||||||  |||| ||||||||| |||||||||||    
T  15675463 ttcacatttcctgtagataatttcacatttccttcggatatatctttcctgcgga 15675409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 332
Target Start/End: Complemental strand, 16567864 - 16567794
Alignment:
Q  262 tttcctgcagaatttacacaaaaatccgcagctaaatccgtaggaaaaccttaaagttctagtaatggctg 332  Q
    ||||||||  |||||||| || ||| ||||| |||||||| | ||||| || |||||||||||||||||||    
T  16567864 tttcctgcgaaatttacataacaattcgcaggtaaatccgcaagaaaagctaaaagttctagtaatggctg 16567794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 19058993 - 19059051
Alignment:
Q  22 tagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||||||||||     ||||||||||||| |||||||| ||||||||||||||    
T  19058993 tagtggctagaattcaccttataaggtgaataagtggggtgtccagggttcgaaccccg 19059051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 77
Target Start/End: Complemental strand, 20191525 - 20191487
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    ||||||||||||| | |||||||||||||||||||||||    
T  20191525 aaggtgaataagtggagtgtccggggttcgaaccccgac 20191487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 29096297 - 29096351
Alignment:
Q  22 tagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaac 71  Q
    |||||||||||||||||     ||||||||||||| |||||||||||||||||||    
T  29096297 tagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaac 29096351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 32158403 - 32158461
Alignment:
Q  22 tagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||||||||||     ||||||||||||| |||||| ||||||||||||||||    
T  32158403 tagtggctagaattcaccttataaggtgaataagtggggtgttcggggttcgaaccccg 32158461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 75
Target Start/End: Complemental strand, 1463952 - 1463919
Alignment:
Q  42 gtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||| |||||||||||||||||||||||    
T  1463952 gtgaataagtggggtgtccggggttcgaaccccg 1463919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 75
Target Start/End: Complemental strand, 28537216 - 28537183
Alignment:
Q  42 gtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||| |||||||||||||||||||||||    
T  28537216 gtgaataagtggggtgtccggggttcgaaccccg 28537183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 72
Target Start/End: Original strand, 35168643 - 35168676
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaacc 72  Q
    ||||||||||||| ||||||||||||||||||||    
T  35168643 aaggtgaataagtggggtgtccggggttcgaacc 35168676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 1244716 - 1244772
Alignment:
Q  22 tagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaaccc 73  Q
    |||||||||||||||||     ||||||||||||| ||||||| |||||||||||||    
T  1244716 tagtggctagaattcaccttataaggtgaataagtggggtgtctggggttcgaaccc 1244772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 2029117 - 2029177
Alignment:
Q  22 tagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||||||||||     ||||||||||||| |||||| ||||||||||| ||||||    
T  2029117 tagtggctagaattcaccttataaggtgaataagtggggtgttcggggttcgaatcccgac 2029177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 112
Target Start/End: Original strand, 12267266 - 12267302
Alignment:
Q  76 acatacagtgacggagccagaaattttatagagcctg 112  Q
    |||||||||| |||||||||| |||||||||||||||    
T  12267266 acatacagtggcggagccagacattttatagagcctg 12267302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 75
Target Start/End: Complemental strand, 18478087 - 18478051
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  18478087 aaggtgaataagtggggtgtccagggttcgaaccccg 18478051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 22396998 - 22397034
Alignment:
Q  38 caaggtgaataagtagggtgtccggggttcgaacccc 74  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  22396998 caagatgaataagtggggtgtccggggttcgaacccc 22397034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 24362582 - 24362542
Alignment:
Q  37 acaaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||| ||||| ||||||||||||| ||||||||||||||||    
T  24362582 acaacgtgaacaagtagggtgtccagggttcgaaccccgac 24362542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 31250227 - 31250195
Alignment:
Q  43 tgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||| |||||||||||||||||||||||    
T  31250227 tgaataagtggggtgtccggggttcgaaccccg 31250195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 75
Target Start/End: Complemental strand, 33800977 - 33800941
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  33800977 aaggtgaataagtggggtgtctggggttcgaaccccg 33800941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 75
Target Start/End: Original strand, 38503272 - 38503304
Alignment:
Q  43 tgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||| |||||||||||||||||||||||    
T  38503272 tgaataagtggggtgtccggggttcgaaccccg 38503304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 43227946 - 43227914
Alignment:
Q  43 tgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||| |||||||||||||||||||||||    
T  43227946 tgaataagtggggtgtccggggttcgaaccccg 43227914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 5e-44; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 143 - 329
Target Start/End: Complemental strand, 25563123 - 25562930
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatt----tttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaat 238  Q
    |||| ||||||||||||||| ||||||  ||||| |||||  ||    ||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  25563123 ttcatatttcctgcagataatttcacatttcctggggataatttcacatttcctgtggatcctaaaatcctatggtattacctcacctgggaacctaaat 25563024  T
Q  239 cctgggcaaaatctgcaggaa---catttcctgcagaatttacacaaaaatccgcagctaaatccgtaggaaaaccttaaagttctagtaatgg 329  Q
    ||| |||||||||||||||||    ||||||||| ||||||||| || ||||||||| |||||||| ||||||| || ||||||||||||||||    
T  25563023 ccttggcaaaatctgcaggaaatgtatttcctgcggaatttacaaaacaatccgcagataaatccgcaggaaaagctaaaagttctagtaatgg 25562930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 143 - 255
Target Start/End: Original strand, 304056 - 304168
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctg 242  Q
    |||||||||||||||||||| ||||||  |||||||||||||| ||||||||||||||||||||| |||||| ||||||||| | ||||||||||||||     
T  304056 ttcacatttcctgcagataatttcacatttcctgcggatatatctttcctgcggatcctaaaatcttatggtgttacctcacatgggaacctaaatcctt 304155  T
Q  243 ggcaaaatctgca 255  Q
    |||||||||||||    
T  304156 ggcaaaatctgca 304168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 149 - 292
Target Start/End: Complemental strand, 12000701 - 12000554
Alignment:
Q  149 tttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaa 248  Q
    ||||| || ||||| ||||||  |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||| ||||| ||||||    
T  12000701 tttccggcggataatttcacatttcctgcggatatatctttcctgcggatcctaaaatcctaaggtattacctcacctagggacctatatccttggcaaa 12000602  T
Q  249 atctgcaggaa---catttcctgcagaatttacacaaaa-atccgcag 292  Q
    |||||||||||     |||||||| |||||||||||||| ||||||||    
T  12000601 atctgcaggaaatgtgtttcctgcggaatttacacaaaacatccgcag 12000554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 187 - 297
Target Start/End: Complemental strand, 17148920 - 17148808
Alignment:
Q  187 tttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaaatctgcaggaa---catttcctgcagaatttacacaaa 283  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||  ||||||||||||||||     |||||||| |||||||||||||    
T  17148920 tttcctgcggatcctaaaatcctatggtattccctcacctgggaacctaaatcct-tgcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaa 17148822  T
Q  284 aatccgcagctaaa 297  Q
    ||||||||| ||||    
T  17148821 aatccgcaggtaaa 17148808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 143 - 292
Target Start/End: Complemental strand, 41010663 - 41010507
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatt----tttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaat 238  Q
    ||||||||||||||||| || ||||||  |||| ||||||  ||    ||||||||||||||||||||| | |||||||||||||| | |||||||||||    
T  41010663 ttcacatttcctgcagaaaatttcacatttcctacggataatttcacatttcctgcggatcctaaaatcttgtggtattacctcacatgggaacctaaat 41010564  T
Q  239 cctgggcaaaatctgcaggaa---catttcctgcagaatttacacaaaaatccgcag 292  Q
    |||  | ||||||||||||||     |||||||||||||||| ||||||||||||||    
T  41010563 ccttagtaaaatctgcaggaaatgtgtttcctgcagaatttatacaaaaatccgcag 41010507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 149 - 284
Target Start/End: Complemental strand, 15651385 - 15651247
Alignment:
Q  149 tttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaa 248  Q
    |||||||| ||||| ||||||  ||||| |||||||| |||||| | ||||||||||||||| || ||||||||||||||| ||||||||||| ||||||    
T  15651385 tttcctgcggataatttcacatttcctggggatatatctttcctactgatcctaaaatcctaaggcattacctcacctagggacctaaatccttggcaaa 15651286  T
Q  249 atctgcaggaa---catttcctgcagaatttacacaaaa 284  Q
    ||  |||||||     |||||||| ||||||||||||||    
T  15651285 atacgcaggaaatgtgtttcctgcggaatttacacaaaa 15651247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 150 - 288
Target Start/End: Complemental strand, 17249495 - 17249354
Alignment:
Q  150 ttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaaa 249  Q
    |||||||  |||| ||||||  |||||||||||||| |||  ||||||||||||||||||| |||||||||||||||  ||||||||||||| |||||||    
T  17249495 ttcctgcgaataatttcacatttcctgcggatatatctttaatgcggatcctaaaatcctaaggtattacctcacctgagaacctaaatccttggcaaaa 17249396  T
Q  250 tctgcaggaa---catttcctgcagaatttacacaaaaatcc 288  Q
    ||| || |||     |||||||  ||||||||||||||||||    
T  17249395 tctacaagaaatgtgtttcctgtggaatttacacaaaaatcc 17249354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 187 - 292
Target Start/End: Original strand, 33909317 - 33909425
Alignment:
Q  187 tttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaaatctgcaggaa---catttcctgcagaatttacacaaa 283  Q
    ||||||| ||||||||||||||||||||||||||||||||  ||||||||||| | || ||||||||||||||     | ||||||||||||| ||||||    
T  33909317 tttcctgtggatcctaaaatcctatggtattacctcacctgagaacctaaatctttggaaaaatctgcaggaaatgtttctcctgcagaattttcacaaa 33909416  T
Q  284 aatccgcag 292  Q
    ||| |||||    
T  33909417 aattcgcag 33909425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 240
Target Start/End: Original strand, 45444404 - 45444494
Alignment:
Q  150 ttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcc 240  Q
    |||||||  |||| ||||||  |||||  ||||||| |||| ||| |||||||||||||||||||||||||||||||  ||||||||||||    
T  45444404 ttcctgcgaataatttcacatttcctgtagatatatctttcttgcagatcctaaaatcctatggtattacctcacctgtgaacctaaatcc 45444494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 16221007 - 16221088
Alignment:
Q  178 ggatatatttttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaaatctgcaggaa 259  Q
    |||||||  |||||||| ||||||||||||||| ||||||| ||||||| ||||| ||||||||  |||||||| |||||||    
T  16221007 ggatatacctttcctgcagatcctaaaatcctaaggtattatctcacctgggaacttaaatccttagcaaaatccgcaggaa 16221088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 36520777 - 36520829
Alignment:
Q  25 tggctagaattcacaaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    ||||||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  36520777 tggctagaattcacctggtgaataagtggggtgtccggggttcgaaccccgac 36520829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 204
Target Start/End: Original strand, 6799850 - 6799911
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaa 204  Q
    |||||||||||||||||||| ||||||  |||| ||||||||| ||||||||||| ||||||    
T  6799850 ttcacatttcctgcagataatttcacatttcctacggatatatctttcctgcggaacctaaa 6799911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 11133182 - 11133122
Alignment:
Q  22 tagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||||||||||     ||||||||||||| |||||||||||||||||||||||||    
T  11133182 tagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccgac 11133122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 37912528 - 37912475
Alignment:
Q  22 tagtggctagaattcacaaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    ||||||||||||||||  |||||||||||| |||||||||||||| ||||||||||    
T  37912528 tagtggctagaattca--aggtgaataagtggggtgtccggggtttgaaccccgac 37912475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 76
Target Start/End: Complemental strand, 1836670 - 1836635
Alignment:
Q  41 ggtgaataagtagggtgtccggggttcgaaccccga 76  Q
    ||||||||||||||||||||||||||||||||||||    
T  1836670 ggtgaataagtagggtgtccggggttcgaaccccga 1836635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 8234781 - 8234839
Alignment:
Q  22 tagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||||||||||     ||||||||||||| |||||||||||||||||||||||    
T  8234781 tagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccg 8234839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 77
Target Start/End: Original strand, 19905666 - 19905704
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  19905666 aaggtgaataagtcgggtgtccggggttcgaaccccgac 19905704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 29257517 - 29257463
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcgga 197  Q
    |||||||||||||||||||| ||||||  |||| ||||||||| |||||||||||    
T  29257517 ttcacatttcctgcagataagttcacatttcctacggatatatctttcctgcgga 29257463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 204
Target Start/End: Original strand, 41114834 - 41114895
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaa 204  Q
    |||||||||||||||||||| ||||||  |||| ||||||||| |||| |||||| ||||||    
T  41114834 ttcacatttcctgcagataatttcacatttcctacggatatatctttcttgcggaacctaaa 41114895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 580794 - 580830
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||||||| |||||||||||||||||||||||    
T  580794 aaggtgaataagtggggtgtccggggttcgaaccccg 580830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 1244654 - 1244618
Alignment:
Q  38 caaggtgaataagtagggtgtccggggttcgaacccc 74  Q
    |||||||||||||| ||||||||||||||||||||||    
T  1244654 caaggtgaataagtggggtgtccggggttcgaacccc 1244618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 3037633 - 3037669
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||||||| |||||||||||||||||||||||    
T  3037633 aaggtgaataagtggggtgtccggggttcgaaccccg 3037669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 11837095 - 11837035
Alignment:
Q  22 tagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||||||||||     |||||||||||||  ||||||||||||||||||||||||    
T  11837095 tagtggctagaattcactttataaggtgaataagtgaggtgtccggggttcgaaccccgac 11837035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 75
Target Start/End: Complemental strand, 17154733 - 17154697
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||||||| |||||||||||||||||||||||    
T  17154733 aaggtgaataagtggggtgtccggggttcgaaccccg 17154697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 75
Target Start/End: Original strand, 33116222 - 33116254
Alignment:
Q  43 tgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||||||||||||||||||||||||||    
T  33116222 tgaataagtagggtgtccggggttcgaaccccg 33116254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 77
Target Start/End: Original strand, 25406660 - 25406699
Alignment:
Q  38 caaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||||||| |||||||||| ||||||||||||||    
T  25406660 caaggtgaataagtggggtgtccggagttcgaaccccgac 25406699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 77
Target Start/End: Complemental strand, 9796977 - 9796943
Alignment:
Q  43 tgaataagtagggtgtccggggttcgaaccccgac 77  Q
    ||||||||| |||||||||||||||||||||||||    
T  9796977 tgaataagtggggtgtccggggttcgaaccccgac 9796943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 77
Target Start/End: Complemental strand, 10262823 - 10262785
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    ||||||||||||| ||||||| |||||||||||||||||    
T  10262823 aaggtgaataagtggggtgtctggggttcgaaccccgac 10262785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 77
Target Start/End: Complemental strand, 23405283 - 23405245
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    ||||||||||||| |||||||| ||||||||||||||||    
T  23405283 aaggtgaataagtggggtgtccagggttcgaaccccgac 23405245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 76
Target Start/End: Complemental strand, 32288461 - 32288423
Alignment:
Q  38 caaggtgaataagtagggtgtccggggttcgaaccccga 76  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  32288461 caaggtgaataagtggggtgtccgaggttcgaaccccga 32288423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 77
Target Start/End: Original strand, 33613616 - 33613654
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    ||||||||||||| ||||||||||||||||||| |||||    
T  33613616 aaggtgaataagtggggtgtccggggttcgaactccgac 33613654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 34756866 - 34756828
Alignment:
Q  172 tcctgcggatatatttttcctgcggatcctaaaatccta 210  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  34756866 tcctgcggatatacctttcctgcggatcctaaaatccta 34756828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 35531939 - 35531901
Alignment:
Q  172 tcctgcggatatatttttcctgcggatcctaaaatccta 210  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  35531939 tcctgcggatataactttcctgcggatcctaaaatccta 35531901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 204
Target Start/End: Original strand, 18299107 - 18299168
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaa 204  Q
    |||||||||||||||||||| ||||||  |||| | ||||||| |||| |||||| ||||||    
T  18299107 ttcacatttcctgcagataatttcacatttcctacagatatatctttcttgcggaacctaaa 18299168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 24034050 - 24034102
Alignment:
Q  22 tagtggctagaattcacaaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||||||||||   |||||||||| | ||||||| |||||||||||||||    
T  24034050 tagtggctagaattcac---gtgaataagtggagtgtccgaggttcgaaccccgac 24034102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 75
Target Start/End: Complemental strand, 29035057 - 29035024
Alignment:
Q  42 gtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||| |||||||||||||||||||||||    
T  29035057 gtgaataagtggggtgtccggggttcgaaccccg 29035024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 75
Target Start/End: Complemental strand, 34034431 - 34034398
Alignment:
Q  42 gtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||| |||||||||||||||||||||||    
T  34034431 gtgaataagtggggtgtccggggttcgaaccccg 34034398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 2304368 - 2304336
Alignment:
Q  45 aataagtagggtgtccggggttcgaaccccgac 77  Q
    ||||||| |||||||||||||||||||||||||    
T  2304368 aataagtggggtgtccggggttcgaaccccgac 2304336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 9802970 - 9802938
Alignment:
Q  45 aataagtagggtgtccggggttcgaaccccgac 77  Q
    ||||||| |||||||||||||||||||||||||    
T  9802970 aataagtggggtgtccggggttcgaaccccgac 9802938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 76
Target Start/End: Original strand, 34149672 - 34149700
Alignment:
Q  48 aagtagggtgtccggggttcgaaccccga 76  Q
    |||||||||||||||||||||||||||||    
T  34149672 aagtagggtgtccggggttcgaaccccga 34149700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 77
Target Start/End: Complemental strand, 41699184 - 41699148
Alignment:
Q  41 ggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  41699184 ggtgaataagtggggtgttcggggttcgaaccccgac 41699148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 44721693 - 44721753
Alignment:
Q  22 tagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||||||||||     ||||||||||| | ||||||||| |||||||||||||||    
T  44721693 tagtggctagaattcaccttataaggtgaataaatggggtgtccgaggttcgaaccccgac 44721753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 3e-39; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 143 - 292
Target Start/End: Original strand, 33179057 - 33179208
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctg 242  Q
    ||||||||| |||||||||| ||||||  | |||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||     
T  33179057 ttcacattttctgcagataatttcacattttctgcggatatatctttcctgcg-atcctaaaatcctatggtattacctcacctgggaacctaaatcctt 33179155  T
Q  243 ggcaaaatctgcaggaa---catttcctgcagaatttacacaaaaatccgcag 292  Q
    |||||||||||||||||     |||||||| |||||||||||||||| |||||    
T  33179156 ggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaaaattcgcag 33179208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 174 - 292
Target Start/End: Complemental strand, 53068400 - 53068279
Alignment:
Q  174 ctgcggatatatttttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaaatctgcaggaa---catttcctgca 270  Q
    |||||||||||||||| ||||| |||||||||||||| ||||||| ||||||||||||||||||| || |||||||||||||||||     |||||||      
T  53068400 ctgcggatatatttttactgcgaatcctaaaatcctaaggtattatctcacctaggaacctaaattcttggcaaaatctgcaggaaatgtgtttcctgtg 53068301  T
Q  271 gaatttacacaaaaatccgcag 292  Q
    ||||||||||||||||||||||    
T  53068300 gaatttacacaaaaatccgcag 53068279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 187 - 332
Target Start/End: Original strand, 41218347 - 41218495
Alignment:
Q  187 tttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaaatctgcaggaa---catttcctgcagaatttacacaaa 283  Q
    |||||||||||||||||||||||| ||||||||||||| |  |||||||||| || ||||||||| |||||||     |||||||| ||||||| |||||    
T  41218347 tttcctgcggatcctaaaatcctaaggtattacctcacatgagaacctaaattcttggcaaaatcggcaggaaatgtgtttcctgcggaatttagacaaa 41218446  T
Q  284 aatccgcagctaaatccgtaggaaaaccttaaagttctagtaatggctg 332  Q
    ||| ||||  |||||||| ||||||| || |||||||||||||||||||    
T  41218447 aatgcgcaagtaaatccgcaggaaaagctaaaagttctagtaatggctg 41218495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 228 - 329
Target Start/End: Complemental strand, 37516746 - 37516642
Alignment:
Q  228 ggaacctaaatcctgggcaaaatctgcaggaaca---tttcctgcagaatttacacaaaaatccgcagctaaatccgtaggaaaaccttaaagttctagt 324  Q
    |||||||| ||||| |||||||||||||||||     ||||||||||||||||||||||| ||||||| |||||||| ||||||| || ||| |||||||    
T  37516746 ggaacctagatccttggcaaaatctgcaggaaatgtgtttcctgcagaatttacacaaaattccgcaggtaaatccgcaggaaaagctaaaaattctagt 37516647  T
Q  325 aatgg 329  Q
    |||||    
T  37516646 aatgg 37516642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 228 - 329
Target Start/End: Original strand, 26371038 - 26371142
Alignment:
Q  228 ggaacctaaatcctgggcaaaatctgcaggaaca---tttcctgcagaatttacacaaaaatccgcagctaaatccgtaggaaaaccttaaagttctagt 324  Q
    |||||||||||||| |||||||||||||||||     |||||||| |||||||||||||||||||||| |||||||| || |||  || ||| |||||||    
T  26371038 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaaaatccgcaggtaaatccgcagaaaatgctaaaatttctagt 26371137  T
Q  325 aatgg 329  Q
    |||||    
T  26371138 aatgg 26371142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 228 - 292
Target Start/End: Complemental strand, 44047688 - 44047621
Alignment:
Q  228 ggaacctaaatcctgggcaaaatctgcaggaa---catttcctgcagaatttacacaaaaatccgcag 292  Q
    |||||||||||||| |||||||||||||||||   |||||||||| ||||||||||||||||||||||    
T  44047688 ggaacctaaatccttggcaaaatctgcaggaaatacatttcctgcggaatttacacaaaaatccgcag 44047621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 41358590 - 41358662
Alignment:
Q  187 tttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaaatctgcaggaa 259  Q
    |||||||||||||| ||||||||| |||||||||||||||  ||||||||||| | ||||||||| |||||||    
T  41358590 tttcctgcggatccaaaaatcctaaggtattacctcacctgagaacctaaatcattggcaaaatccgcaggaa 41358662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 229 - 292
Target Start/End: Complemental strand, 53652001 - 53651935
Alignment:
Q  229 gaacctaaatcctgggcaaaatctgcaggaa---catttcctgcagaatttacacaaaaatccgcag 292  Q
    ||||||||||||| |||||||||||||||||   |||||||||| ||||||||||||||||||||||    
T  53652001 gaacctaaatccttggcaaaatctgcaggaaatgcatttcctgcggaatttacacaaaaatccgcag 53651935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 228 - 329
Target Start/End: Complemental strand, 7501060 - 7500956
Alignment:
Q  228 ggaacctaaatcctgggcaaaatctgcaggaaca---tttcctgcagaatttacacaaaaatccgcagctaaatccgtaggaaaaccttaaagttctagt 324  Q
    |||||||||||||| ||||||||||| |||||     |||||||| ||||||||||||| |||||||  |||||||| ||||||| || ||| |||||||    
T  7501060 ggaacctaaatccttggcaaaatctgtaggaaatgtgtttcctgcggaatttacacaaacatccgcatgtaaatccgcaggaaaagctaaaaattctagt 7500961  T
Q  325 aatgg 329  Q
    |||||    
T  7500960 aatgg 7500956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 228 - 292
Target Start/End: Complemental strand, 14461169 - 14461102
Alignment:
Q  228 ggaacctaaatcctgggcaaaatctgcagga---acatttcctgcagaatttacacaaaaatccgcag 292  Q
    |||||||||||||| ||||||||||||||||   ||||||||||| ||||||||| ||||||||||||    
T  14461169 ggaacctaaatccttggcaaaatctgcaggacatacatttcctgcggaatttacataaaaatccgcag 14461102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 228 - 292
Target Start/End: Complemental strand, 28311381 - 28311314
Alignment:
Q  228 ggaacctaaatcctgggcaaaatctgcaggaa---catttcctgcagaatttacacaaaaatccgcag 292  Q
    |||||||||||||| |||||||||| ||||||   |||||||||| ||||||||||||||||||||||    
T  28311381 ggaacctaaatccttggcaaaatctacaggaaatacatttcctgcggaatttacacaaaaatccgcag 28311314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 7501112 - 7501051
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaa 204  Q
    |||||||||||||||||||| ||||||  |||| ||||||||| ||||||||||| ||||||    
T  7501112 ttcacatttcctgcagataatttcacatttcctacggatatatctttcctgcggaacctaaa 7501051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 14417978 - 14417920
Alignment:
Q  18 agcttagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaac 71  Q
    |||||||||||||||||||||     ||||||||||||| |||||||||||||||||||    
T  14417978 agcttagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaac 14417920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 204
Target Start/End: Complemental strand, 14461218 - 14461160
Alignment:
Q  146 acatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaa 204  Q
    ||||||||||||||||| ||||||  |||| ||||||||| ||||||||||| ||||||    
T  14461218 acatttcctgcagataaattcacatttcctacggatatatctttcctgcggaacctaaa 14461160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 32508781 - 32508843
Alignment:
Q  20 cttagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||||||||||||     ||||||||||||| |||||| ||||||||||||||||||    
T  32508781 cttagtggctagaattcaccttataaggtgaataagtggggtgttcggggttcgaaccccgac 32508843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 46328913 - 46328971
Alignment:
Q  22 tagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||||||||||     ||||||||||||| |||||||||||||||||||||||    
T  46328913 tagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccg 46328971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 12909984 - 12909923
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaa 204  Q
    ||||||||||||| |||||| ||||||  |||| ||||||||| ||||||||||| ||||||    
T  12909984 ttcacatttcctgtagataaattcacatttcctacggatatatctttcctgcggaacctaaa 12909923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 292
Target Start/End: Original strand, 25391841 - 25391908
Alignment:
Q  228 ggaacctaaatcctgggcaaaatctgcaggaa---catttcctgcagaatttacacaaaaatccgcag 292  Q
    |||||||||||||| |||||||| |||| |||   |||||| ||| ||||||||||||||||||||||    
T  25391841 ggaacctaaatccttggcaaaatttgcaagaaatacatttcttgcggaatttacacaaaaatccgcag 25391908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 235 - 331
Target Start/End: Complemental strand, 26278460 - 26278361
Alignment:
Q  235 aaatcctgggcaaaatctgcaggaaca---tttcctgcagaatttacacaaaaatccgcagctaaatccgtaggaaaaccttaaagttctagtaatggct 331  Q
    ||||||| |||||||||||||||||     |||||| | ||||||||| ||||||||| || |||||||| | ||||| || ||| ||||||||||||||    
T  26278460 aaatcctaggcaaaatctgcaggaaatgtgtttcctccggaatttacataaaaatccgtaggtaaatccgcatgaaaagctaaaaattctagtaatggct 26278361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 28311433 - 28311372
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaa 204  Q
    |||||||||||||||||||| ||||||  |||| ||||||||| ||||| ||||| ||||||    
T  28311433 ttcacatttcctgcagataaattcacatttcctacggatatatctttccagcggaacctaaa 28311372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 33206863 - 33206806
Alignment:
Q  22 tagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaacccc 74  Q
    |||||||||||||||||     ||||||||||||| ||||||||||||||||||||||    
T  33206863 tagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaacccc 33206806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 204
Target Start/End: Original strand, 43700158 - 43700219
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaa 204  Q
    |||||||||||||||||||| ||||||  |||  ||||||||| ||||||||||| ||||||    
T  43700158 ttcacatttcctgcagataatttcacatttccaacggatatatctttcctgcggaacctaaa 43700219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 44047740 - 44047679
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaa 204  Q
    |||||||||||||||||||| ||||||  |||| ||||||||| |||| |||||| ||||||    
T  44047740 ttcacatttcctgcagataaattcacatttcctacggatatatctttcttgcggaacctaaa 44047679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 49146191 - 49146130
Alignment:
Q  21 ttagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    ||||||||||||||||||     || |||||||||| |||||||||||||||||||||||||    
T  49146191 ttagtggctagaattcaccttataaagtgaataagtggggtgtccggggttcgaaccccgac 49146130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 42 - 75
Target Start/End: Complemental strand, 52030202 - 52030169
Alignment:
Q  42 gtgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||||||||||||||||||||||||||||    
T  52030202 gtgaataagtagggtgtccggggttcgaaccccg 52030169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 53652054 - 53651993
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaa 204  Q
    |||||||||||||||||||| ||||||  |||| ||||||||| |||||||| || ||||||    
T  53652054 ttcacatttcctgcagataaattcacatttcctacggatatatctttcctgcagaacctaaa 53651993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 54983693 - 54983754
Alignment:
Q  21 ttagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    ||||||||||||||||||     ||||||||||| | |||||||||||||||||||||||||    
T  54983693 ttagtggctagaattcaccttataaggtgaataaatggggtgtccggggttcgaaccccgac 54983754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 75
Target Start/End: Complemental strand, 24537911 - 24537875
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||||||| |||||||||||||||||||||||    
T  24537911 aaggtgaataagtggggtgtccggggttcgaaccccg 24537875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 36331715 - 36331775
Alignment:
Q  22 tagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||||||||||     || |||||||||| |||||||||||||||||||||||||    
T  36331715 tagtggctagaattcactttttaaagtgaataagtggggtgtccggggttcgaaccccgac 36331775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 42271024 - 42271060
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||||||||||||||||| ||||||||||||    
T  42271024 aaggtgaataagtagggtgtccggagttcgaaccccg 42271060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 43774291 - 43774231
Alignment:
Q  22 tagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||||||||||     ||||||||||||| ||||||| |||||||||||||||||    
T  43774291 tagtggctagaattcaccttataaggtgaataagtggggtgtctggggttcgaaccccgac 43774231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 74
Target Start/End: Complemental strand, 2732747 - 2732712
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaacccc 74  Q
    ||||||||||||| ||||||||||||||||||||||    
T  2732747 aaggtgaataagtggggtgtccggggttcgaacccc 2732712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 3955415 - 3955356
Alignment:
Q  21 ttagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||||||||||||     || |||||||||| |||||||||||||||||||||||    
T  3955415 ttagtggctagaattcactttttaaagtgaataagtggggtgtccggggttcgaaccccg 3955356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 70
Target Start/End: Original strand, 18201488 - 18201519
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaa 70  Q
    ||||||||||||||||||||||||||||||||    
T  18201488 aaggtgaataagtagggtgtccggggttcgaa 18201519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 42 - 77
Target Start/End: Complemental strand, 24559470 - 24559435
Alignment:
Q  42 gtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||| |||||||||||||||||||||||||    
T  24559470 gtgaataagtggggtgtccggggttcgaaccccgac 24559435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 77
Target Start/End: Complemental strand, 32080140 - 32080101
Alignment:
Q  38 caaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  32080140 caaggtgaataagtggggtgttcggggttcgaaccccgac 32080101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 77
Target Start/End: Original strand, 16006517 - 16006555
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    ||||||||||||| ||||||| |||||||||||||||||    
T  16006517 aaggtgaataagtggggtgtctggggttcgaaccccgac 16006555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 73
Target Start/End: Complemental strand, 27066694 - 27066660
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccc 73  Q
    ||||||||||||| |||||||||||||||||||||    
T  27066694 aaggtgaataagtggggtgtccggggttcgaaccc 27066660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 77
Target Start/End: Original strand, 31902216 - 31902254
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    ||||||||||||| |||||||||| ||||||||||||||    
T  31902216 aaggtgaataagtggggtgtccggagttcgaaccccgac 31902254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 77
Target Start/End: Complemental strand, 35483353 - 35483315
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    ||||||||||||| ||||||||||| |||||||||||||    
T  35483353 aaggtgaataagtggggtgtccgggattcgaaccccgac 35483315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 36727450 - 36727512
Alignment:
Q  20 cttagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||||||||||||     ||| ||||||||| ||||||||| |||||||||||||||    
T  36727450 cttagtggctagaattcaccttataagatgaataagtggggtgtccgaggttcgaaccccgac 36727512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 73
Target Start/End: Complemental strand, 45431711 - 45431677
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccc 73  Q
    ||||||||||||| |||||||||||||||||||||    
T  45431711 aaggtgaataagtggggtgtccggggttcgaaccc 45431677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 48173396 - 48173338
Alignment:
Q  18 agcttagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaac 71  Q
    |||||||||||||||||||||     |||||||||||||  ||||||||||||||||||    
T  48173396 agcttagtggctagaattcaccttataaggtgaataagtgaggtgtccggggttcgaac 48173338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 73
Target Start/End: Complemental strand, 49429544 - 49429510
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccc 73  Q
    ||||||||||||| |||||||||||||||||||||    
T  49429544 aaggtgaataagtggggtgtccggggttcgaaccc 49429510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 49639134 - 49639076
Alignment:
Q  22 tagtggctagaattc-----acaaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||||||||     ||||||||||||||| |||||| ||||||||||||||||    
T  49639134 tagtggctagaattcaccttacaaggtgaataagtggggtgttcggggttcgaaccccg 49639076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 77
Target Start/End: Complemental strand, 7020857 - 7020820
Alignment:
Q  40 aggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||||| ||||| |||||||||||||||||||    
T  7020857 aggtgaataagttgggtgaccggggttcgaaccccgac 7020820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 75
Target Start/End: Complemental strand, 9625064 - 9625031
Alignment:
Q  42 gtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||| |||||||||||||||||||||||    
T  9625064 gtgaataagtggggtgtccggggttcgaaccccg 9625031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 75
Target Start/End: Complemental strand, 10959214 - 10959181
Alignment:
Q  42 gtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||| |||||||||||||||||||||||    
T  10959214 gtgaataagtggggtgtccggggttcgaaccccg 10959181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 75
Target Start/End: Original strand, 11668279 - 11668316
Alignment:
Q  38 caaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  11668279 caaggtgaataagtggggtgtccgtggttcgaaccccg 11668316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 292
Target Start/End: Complemental strand, 12909890 - 12909857
Alignment:
Q  259 acatttcctgcagaatttacacaaaaatccgcag 292  Q
    ||||||||||| ||||||||||||||||||||||    
T  12909890 acatttcctgcggaatttacacaaaaatccgcag 12909857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 18399641 - 18399698
Alignment:
Q  22 tagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaacccc 74  Q
    |||||||||||||||||     ||||||||| ||||| ||||||||||||||||||||    
T  18399641 tagtggctagaattcaccttttaaggtgaatgagtagcgtgtccggggttcgaacccc 18399698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 20623761 - 20623822
Alignment:
Q  17 cagcttagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaaccc 73  Q
    ||||||||||||||||||||||     ||||||||||||| |||||||| | ||||||||||    
T  20623761 cagcttagtggctagaattcaccttataaggtgaataagtggggtgtcctgagttcgaaccc 20623822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 75
Target Start/End: Complemental strand, 24130644 - 24130607
Alignment:
Q  38 caaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||||||| ||||||||||||||| |||||||    
T  24130644 caaggtgaataagtggggtgtccggggttcaaaccccg 24130607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 75
Target Start/End: Original strand, 27183695 - 27183728
Alignment:
Q  42 gtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||| |||||||||||||||||||||||    
T  27183695 gtgaataagtggggtgtccggggttcgaaccccg 27183728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 72
Target Start/End: Complemental strand, 30157086 - 30157053
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaacc 72  Q
    ||||||||||||| ||||||||||||||||||||    
T  30157086 aaggtgaataagttgggtgtccggggttcgaacc 30157053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 50724473 - 50724416
Alignment:
Q  22 tagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaacccc 74  Q
    |||||||||||||||||     ||||||||||||| ||||||||| ||||||||||||    
T  50724473 tagtggctagaattcactttttaaggtgaataagtggggtgtccgaggttcgaacccc 50724416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 50788375 - 50788432
Alignment:
Q  22 tagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaacccc 74  Q
    |||||||||||||||||     ||||||||||||| ||||||||| ||||||||||||    
T  50788375 tagtggctagaattcactttttaaggtgaataagtggggtgtccgaggttcgaacccc 50788432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 28963066 - 28963010
Alignment:
Q  21 ttagtggctagaattcacaaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||| |||||||  ||||||||||| || ||| |||| |||||||||||||    
T  28963066 ttagtggctaaaattcacctggtgaataagtgggatgttcgggattcgaaccccgac 28963010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 75
Target Start/End: Original strand, 29645842 - 29645874
Alignment:
Q  43 tgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||| |||||||||||||||||||||||    
T  29645842 tgaataagtggggtgtccggggttcgaaccccg 29645874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 36256668 - 36256728
Alignment:
Q  22 tagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||||||||||     ||||||||||||||||||||  | |||||||||||||||    
T  36256668 tagtggctagaattcaccttataaggtgaataagtagggtgtatgaggttcgaaccccgac 36256728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 43566785 - 43566845
Alignment:
Q  22 tagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||||||||||     ||||||||||||| ||||||| | |||||||||||||||    
T  43566785 tagtggctagaattcaccttataaggtgaataagtggggtgtctgaggttcgaaccccgac 43566845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 50144617 - 50144653
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||||||| | |||||||||||||||||||||    
T  50144617 aaggtgaataagtggagtgtccggggttcgaaccccg 50144653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 75
Target Start/End: Complemental strand, 53468032 - 53467996
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||||||| ||||||||| |||||||||||||    
T  53468032 aaggtgaataagtggggtgtccgaggttcgaaccccg 53467996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 1e-38; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 143 - 327
Target Start/End: Original strand, 39431594 - 39431781
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctg 242  Q
    ||||||||||||| |||||| ||||||  || ||||||||||| |||| ||||| ||| |||||||||||||||||||||||||||||||||||||| |     
T  39431594 ttcacatttcctgtagataatttcacatttcatgcggatatatctttcttgcgggtccgaaaatcctatggtattacctcacctaggaacctaaatcttt 39431693  T
Q  243 ggcaaaatctgcaggaa---catttcctgcagaatttacacaaaaatccgcagctaaatccgtaggaaaaccttaaagttctagtaat 327  Q
    ||||||||||||| |||     |||||| | |||||||||||||| ||||||| |||||||| | ||||| || ||||||| ||||||    
T  39431694 ggcaaaatctgcacgaaatgtgtttcctacggaatttacacaaaactccgcaggtaaatccgcaagaaaagctaaaagttcaagtaat 39431781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 187 - 332
Target Start/End: Complemental strand, 13243233 - 13243085
Alignment:
Q  187 tttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaaatctgcaggaa---catttcctgcagaatttacacaaa 283  Q
    |||| ||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||| ||||||     |||||||| |||||||||||||    
T  13243233 tttcttgcggatcctaaaatcctaaggtattacctcacctgggaacctaaatccttggcaaaatctacaggaaatgtgtttcctgcggaatttacacaaa 13243134  T
Q  284 aatccgcagctaaatccgtaggaaaaccttaaagttctagtaatggctg 332  Q
    | ||||||| |||||| | ||||||| || ||||||||| |||||||||    
T  13243133 actccgcagataaatctgcaggaaaagctaaaagttctaataatggctg 13243085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 143 - 291
Target Start/End: Original strand, 34282825 - 34282980
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatt----tttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaat 238  Q
    ||||||||||||||| |||| ||||||  || ||||||||  ||    |||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  34282825 ttcacatttcctgcaaataatttcacatttcatgcggataatttcacatttcctgcggatcctaaaatcctatggtattacctcacctcggaacttaaat 34282924  T
Q  239 cctgggcaaaatctgcaggaa---catttcctgcagaatttacacaaaaatccgca 291  Q
    ||| |||||||||||||||||     ||||||||||||||||||| ||||||||||    
T  34282925 ccttggcaaaatctgcaggaaatgtgtttcctgcagaatttacactaaaatccgca 34282980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 228 - 329
Target Start/End: Original strand, 3384036 - 3384140
Alignment:
Q  228 ggaacctaaatcctgggcaaaatctgcaggaa---catttcctgcagaatttacacaaaaatccgcagctaaatccgtaggaaaaccttaaagttctagt 324  Q
    |||||||||||||| |||||||||| || |||   |||||  |||||||||||||||||||||||||| |||||||| || |||| || ||| ||||| |    
T  3384036 ggaacctaaatccttggcaaaatctacatgaaatacattttttgcagaatttacacaaaaatccgcaggtaaatccgcagaaaaagctaaaaattctaat 3384135  T
Q  325 aatgg 329  Q
    |||||    
T  3384136 aatgg 3384140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 14010757 - 14010821
Alignment:
Q  18 agcttagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||||||||||| ||     ||||||||||||| |||||||||||||||||||||||||    
T  14010757 agcttagtggctagaatttaccttataaggtgaataagtggggtgtccggggttcgaaccccgac 14010821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 574325 - 574271
Alignment:
Q  22 tagtggctagaattcacaaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||| |||||||  |||||||||||||| |||||||||||||||||||||||||    
T  574325 tagtggttagaattttcaaggtgaataagt-gggtgtccggggttcgaaccccgac 574271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 223 - 301
Target Start/End: Complemental strand, 8968440 - 8968364
Alignment:
Q  223 acctaggaacctaaatcctgggcaaaatctgcaggaacatttcctgcagaatttacacaaaaatccgcagctaaatccg 301  Q
    |||| |||||||||||||| ||||||||| |||||  | |||||||| |||||||||| || |||||||| ||||||||    
T  8968440 acctgggaacctaaatccttggcaaaatccgcagg--cgtttcctgcggaatttacaccaatatccgcaggtaaatccg 8968364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 75
Target Start/End: Original strand, 4798550 - 4798588
Alignment:
Q  37 acaaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  4798550 acaaggtgaataagtggggtgtccggggttcgaaccccg 4798588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 204
Target Start/End: Original strand, 3383984 - 3384045
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaa 204  Q
    ||||| |||||||||||||| ||||||  |||| ||||||||| ||||||||||| ||||||    
T  3383984 ttcacgtttcctgcagataaattcacatttcctacggatatatctttcctgcggaacctaaa 3384045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 31500794 - 31500851
Alignment:
Q  180 atatatttttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaa 237  Q
    |||||| |||||  ||||||||||||||||| ||||||||||||||| |||| |||||    
T  31500794 atatatctttccaacggatcctaaaatcctaaggtattacctcaccttggaatctaaa 31500851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 33570417 - 33570478
Alignment:
Q  21 ttagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    ||||||||||||||||||     ||||||||||||| ||||||||| |||||||||||||||    
T  33570417 ttagtggctagaattcaccttataaggtgaataagtggggtgtccgaggttcgaaccccgac 33570478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 75
Target Start/End: Complemental strand, 9525041 - 9525005
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||||||||||||||| |||||||||||||||    
T  9525041 aaggtgaataagtagggtgtctggggttcgaaccccg 9525005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 15042376 - 15042412
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||||||| |||||||||||||||||||||||    
T  15042376 aaggtgaataagtggggtgtccggggttcgaaccccg 15042412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 24608494 - 24608530
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||||||||||||||| |||||||||||||||    
T  24608494 aaggtgaataagtagggtgtctggggttcgaaccccg 24608530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 43468694 - 43468754
Alignment:
Q  22 tagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||||||||||     ||||||||||||| |||||||||| ||||||||||||||    
T  43468694 tagtggctagaattcaccttataaggtgaataagtggggtgtccggagttcgaaccccgac 43468754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 44070356 - 44070412
Alignment:
Q  21 ttagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaacc 72  Q
    ||||||||||||||||||     ||||||||||||||||||||||| ||||||||||    
T  44070356 ttagtggctagaattcaccttataaggtgaataagtagggtgtccgaggttcgaacc 44070412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 8740641 - 8740700
Alignment:
Q  18 agcttagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaacc 72  Q
    |||||||||||||||||||||     ||| |||||||||||||||||||| |||||||||    
T  8740641 agcttagtggctagaattcaccttataagatgaataagtagggtgtccggagttcgaacc 8740700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 17467362 - 17467327
Alignment:
Q  38 caaggtgaataagtagggtgtccggggttcgaaccc 73  Q
    |||||||||||||| |||||||||||||||||||||    
T  17467362 caaggtgaataagtggggtgtccggggttcgaaccc 17467327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 42 - 77
Target Start/End: Complemental strand, 31129383 - 31129348
Alignment:
Q  42 gtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||| |||||||||||||||||||||||||    
T  31129383 gtgaataagtggggtgtccggggttcgaaccccgac 31129348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 42 - 77
Target Start/End: Original strand, 35301177 - 35301212
Alignment:
Q  42 gtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    ||||||||||||||||||||| ||||||||||||||    
T  35301177 gtgaataagtagggtgtccggagttcgaaccccgac 35301212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 77
Target Start/End: Complemental strand, 14683960 - 14683922
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    ||||||||||||| || ||||||||||||||||||||||    
T  14683960 aaggtgaataagtgggatgtccggggttcgaaccccgac 14683922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 77
Target Start/End: Complemental strand, 23239208 - 23239170
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  23239208 aaggtgaataagtggggtgtccggggttcaaaccccgac 23239170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 197
Target Start/End: Original strand, 36406454 - 36406508
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcgga 197  Q
    |||||||||| ||||||||| ||||||  |||| ||||||||| |||||||||||    
T  36406454 ttcacatttcttgcagataatttcacatttcctacggatatatctttcctgcgga 36406508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 77
Target Start/End: Original strand, 43456667 - 43456701
Alignment:
Q  43 tgaataagtagggtgtccggggttcgaaccccgac 77  Q
    ||||||||| |||||||||||||||||||||||||    
T  43456667 tgaataagtggggtgtccggggttcgaaccccgac 43456701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 75
Target Start/End: Complemental strand, 2696614 - 2696581
Alignment:
Q  42 gtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||| |||||||||||||||||||||||    
T  2696614 gtgaataagtggggtgtccggggttcgaaccccg 2696581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 75
Target Start/End: Complemental strand, 2800100 - 2800067
Alignment:
Q  42 gtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||| |||||||||||||||||||||||    
T  2800100 gtgaataagtggggtgtccggggttcgaaccccg 2800067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 75
Target Start/End: Complemental strand, 17855730 - 17855697
Alignment:
Q  42 gtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||| |||||||||||||||||||||||    
T  17855730 gtgaataagtggggtgtccggggttcgaaccccg 17855697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 72
Target Start/End: Original strand, 19957332 - 19957365
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaacc 72  Q
    ||||||||||||| ||||||||||||||||||||    
T  19957332 aaggtgaataagtggggtgtccggggttcgaacc 19957365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 72
Target Start/End: Original strand, 25689399 - 25689432
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaacc 72  Q
    ||||||| ||||||||||||||||||||||||||    
T  25689399 aaggtgattaagtagggtgtccggggttcgaacc 25689432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 28928210 - 28928149
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaa 204  Q
    ||||||||| |||||||||| ||||||  |||| | ||||||| ||||||||||| ||||||    
T  28928210 ttcacattttctgcagataatttcacatttcctacagatatatctttcctgcggaacctaaa 28928149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 75
Target Start/End: Complemental strand, 33524477 - 33524444
Alignment:
Q  42 gtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||| |||||||||||||||||||||||    
T  33524477 gtgaataagtggggtgtccggggttcgaaccccg 33524444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 72
Target Start/End: Original strand, 34073250 - 34073283
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaacc 72  Q
    ||||||||||||| ||||||||||||||||||||    
T  34073250 aaggtgaataagtggggtgtccggggttcgaacc 34073283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 2376615 - 2376568
Alignment:
Q  25 tggctagaattcacaaggtgaataagtagggtgtccggggttcgaaccc 73  Q
    ||||||||||||||| ||||||||||| | ||||||| |||||||||||    
T  2376615 tggctagaattcaca-ggtgaataagtggagtgtccgaggttcgaaccc 2376568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 5184873 - 5184933
Alignment:
Q  19 gcttagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaacccc 74  Q
    ||||||||| ||||||||||     ||||||||||||| |||||||| |||||||||||||    
T  5184873 gcttagtggttagaattcaccttataaggtgaataagtggggtgtccagggttcgaacccc 5184933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 75
Target Start/End: Complemental strand, 8034614 - 8034578
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  8034614 aaggtgaataagtggggtgttcggggttcgaaccccg 8034578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 75
Target Start/End: Complemental strand, 11823046 - 11823010
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  11823046 aaggtgaataagtggggtgtccggggttcaaaccccg 11823010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 13702337 - 13702401
Alignment:
Q  18 agcttagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||||||||||||||     |||||||||||||  |||||| | |||||||||||||||    
T  13702337 agcttagtggctagaattcaccttataaggtgaataagtgaggtgtctgaggttcgaaccccgac 13702401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 75
Target Start/End: Original strand, 41454842 - 41454874
Alignment:
Q  43 tgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||| |||||||||||||||||||||||    
T  41454842 tgaataagtggggtgtccggggttcgaaccccg 41454874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 42762021 - 42762079
Alignment:
Q  22 tagtggctagaattcac---aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||||||||||   ||||||||||||| ||||||||||| || ||||| ||||    
T  42762021 tagtggctagaattcaccttaaggtgaataagtggggtgtccgggatttgaacctcgac 42762079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 43508459 - 43508495
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  43508459 aaggtgaataagtggggtgtccggggttcaaaccccg 43508495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 5e-38; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 150 - 360
Target Start/End: Complemental strand, 25237753 - 25237531
Alignment:
Q  150 ttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaaa 249  Q
    |||||||  |||| ||||||  ||||||||||| || ||||||||| ||||||||||| || ||||||||||||||| |||||||||||||| |||||||    
T  25237753 ttcctgcgaataatttcacatttcctgcggatacatctttcctgcgaatcctaaaatcataaggtattacctcacctgggaacctaaatccttggcaaaa 25237654  T
Q  250 tctgcaggaa---catttcctgcagaatttacacaaaaatccgcagctaaatccgtaggaaaaccttaaagttctagtaatggctg---------aaaag 337  Q
    ||||||||||     |||||||| |||||||||||||| ||||||| |||||||| || |||  || ||||||||||||||| |||          ||||    
T  25237653 tctgcaggaaatgtgtttcctgcggaatttacacaaaattccgcaggtaaatccgcagaaaacgctaaaagttctagtaatgactggacttactacaaag 25237554  T
Q  338 aaagttggagctgagcctgggct 360  Q
    |||||||||||||||||||||||    
T  25237553 aaagttggagctgagcctgggct 25237531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 143 - 332
Target Start/End: Original strand, 2521863 - 2522054
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctg 242  Q
    |||||||||||||| |||||  |||||  | |||||||||| | |||||||||||||||||||||||| | ||||||||||||| ||||||||||||||     
T  2521863 ttcacatttcctgcggataatatcacattttctgcggatatgtctttcctgcggatcctaaaatcctaagatattacctcacctgggaacctaaatcctt 2521962  T
Q  243 ggcaaaatctgcaggaa---catttcctgcagaatttacacaaaaatccgcagctaaatccgtaggaaaaccttaaagttctagtaatggctg 332  Q
    |  ||||||| ||||||     |||||||| || ||||||||||||||||||| |||||||  ||||||| || ||||||| |||||||||||    
T  2521963 gataaaatctacaggaaatgtgtttcctgcggactttacacaaaaatccgcaggtaaatcc-caggaaaagctaaaagttcaagtaatggctg 2522054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 187 - 256
Target Start/End: Complemental strand, 49745179 - 49745110
Alignment:
Q  187 tttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaaatctgcag 256  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  49745179 tttcctgcggatcctaaaatcctaaggtattacctcacctaggaacctaaatccttggcaaaatctgcag 49745110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 188 - 299
Target Start/End: Complemental strand, 36947657 - 36947543
Alignment:
Q  188 ttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaaatctgcagga---acatttcctgcagaatttacacaaaa 284  Q
    ||||||||||||||||||||||| ||||||||| ||||| ||||||||||| || ||||||||| ||||||   |  |||||||||||||||| ||||||    
T  36947657 ttcctgcggatcctaaaatcctaaggtattaccacacctgggaacctaaattcttggcaaaatccgcaggaaatatgtttcctgcagaatttatacaaaa 36947558  T
Q  285 atccgcagctaaatc 299  Q
    |||||||| ||||||    
T  36947557 atccgcaggtaaatc 36947543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 191 - 292
Target Start/End: Original strand, 41972417 - 41972521
Alignment:
Q  191 ctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaaatctgcaggaa---catttcctgcagaatttacacaaaaatc 287  Q
    ||||||||||||||||| || | ||||||||||||| ||||||| |||||| |||||||||||||||||     |||||||| |||||||||||||||||    
T  41972417 ctgcggatcctaaaatcttaagatattacctcacctgggaaccttaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaaaatc 41972516  T
Q  288 cgcag 292  Q
    |||||    
T  41972517 cgcag 41972521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 143 - 292
Target Start/End: Complemental strand, 50100021 - 50099872
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctg 242  Q
    |||||||||||||| ||||| ||||||  ||||||  |||||| |    ||||||||||||||||||| |||||||| |||||| ||||||||||||||     
T  50100021 ttcacatttcctgcggataatttcacatttcctgcaaatatatat---atgcggatcctaaaatcctaaggtattacttcacctgggaacctaaatcctt 50099925  T
Q  243 ggcaaaatctgcaggaa---catttcctgcagaatttacacaaaaatccgcag 292  Q
     ||||||| ||||| ||    ||||||| | ||||||||||||||||||||||    
T  50099924 agcaaaatttgcagaaaatgaatttcctacggaatttacacaaaaatccgcag 50099872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 228 - 329
Target Start/End: Complemental strand, 4728657 - 4728553
Alignment:
Q  228 ggaacctaaatcctgggcaaaatctgcaggaaca---tttcctgcagaatttacacaaaaatccgcagctaaatccgtaggaaaaccttaaagttctagt 324  Q
    |||||||||||||| |||||||||||||||||     |||||||| |||||||| ||||||||||||| |||||||| ||||||| || ||| |||||||    
T  4728657 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttactcaaaaatccgcaggtaaatccgcaggaaaagctaaaaattctagt 4728558  T
Q  325 aatgg 329  Q
    |||||    
T  4728557 aatgg 4728553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 187 - 292
Target Start/End: Complemental strand, 52373878 - 52373770
Alignment:
Q  187 tttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaaatctgcagga---acatttcctgcagaatttacacaaa 283  Q
    |||| ||||||||||||||||||| ||||||||||||||| |||||||||||||  | ||||||||||| ||   || ||| |||| |||||||||||||    
T  52373878 tttcatgcggatcctaaaatcctaaggtattacctcacctgggaacctaaatccctgacaaaatctgcaagaaatacgttttctgcggaatttacacaaa 52373779  T
Q  284 aatccgcag 292  Q
    |||| ||||    
T  52373778 aatctgcag 52373770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 174 - 292
Target Start/End: Complemental strand, 8901955 - 8901835
Alignment:
Q  174 ctgcggatatatttttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaaatctgcaggaa---catttcctgca 270  Q
    |||||||| ||| ||||| | |||||||||||||||| |||||||||||| || | || ||||||||| |||||||||||||||||     ||||||||     
T  8901955 ctgcggatgtatctttcccgtggatcctaaaatcctaaggtattacctca-ctggaaatctaaatccttggcaaaatctgcaggaaatgtgtttcctgcg 8901857  T
Q  271 gaatttacacaaaaatccgcag 292  Q
    || |||||||||||||| ||||    
T  8901856 gagtttacacaaaaatctgcag 8901835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 262 - 329
Target Start/End: Complemental strand, 46645665 - 46645598
Alignment:
Q  262 tttcctgcagaatttacacaaaaatccgcagctaaatccgtaggaaaaccttaaagttctagtaatgg 329  Q
    ||||||||||||||||||||||||||||||| |||||||| || |||| || ||| ||||||||||||    
T  46645665 tttcctgcagaatttacacaaaaatccgcaggtaaatccgcagaaaaagctaaaaattctagtaatgg 46645598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 228 - 292
Target Start/End: Complemental strand, 4552284 - 4552217
Alignment:
Q  228 ggaacctaaatcctgggcaaaatctgcagga---acatttcctgcagaatttacacaaaaatccgcag 292  Q
    |||||||||||||| ||||||||||||||||   ||||||||||| ||||||||||| ||||||||||    
T  4552284 ggaacctaaatccttggcaaaatctgcaggaaatacatttcctgcggaatttacacacaaatccgcag 4552217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 39 - 77
Target Start/End: Complemental strand, 33076614 - 33076576
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||||||||||||||||||||||||||||||||    
T  33076614 aaggtgaataagtagggtgtccggggttcgaaccccgac 33076576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 292
Target Start/End: Original strand, 2017454 - 2017521
Alignment:
Q  228 ggaacctaaatcctgggcaaaatctgcaggaa---catttcctgcagaatttacacaaaaatccgcag 292  Q
    ||||||||||| || |||||||||||| ||||   |||||||||| ||||||||||||||||||||||    
T  2017454 ggaacctaaatacttggcaaaatctgcgggaaatacatttcctgcggaatttacacaaaaatccgcag 2017521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 4552336 - 4552275
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaa 204  Q
    |||||||||||||||||||| ||||||  |||| ||||||||| ||||||||||| ||||||    
T  4552336 ttcacatttcctgcagataaattcacatttcctacggatatatctttcctgcggaacctaaa 4552275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 10715807 - 10715746
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaa 204  Q
    |||||||||||||||||||| ||||||  |||| ||||||||| ||||||||||| ||||||    
T  10715807 ttcacatttcctgcagataatttcacatttcctacggatatatctttcctgcggaacctaaa 10715746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 10929577 - 10929516
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaa 204  Q
    |||||||||||||||||||| ||||||  |||| ||||||||| ||||||||||| ||||||    
T  10929577 ttcacatttcctgcagataatttcacatttcctacggatatatctttcctgcggaacctaaa 10929516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 35909161 - 35909212
Alignment:
Q  25 tggctagaattcacaaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    ||||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  35909161 tggctagaattcacaaggtgaataaat-gggagtccggggttcgaaccccgac 35909212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 235 - 333
Target Start/End: Complemental strand, 9694191 - 9694090
Alignment:
Q  235 aaatcctgggcaaaatctgcaggaaca---tttcctgcagaatttacacaaaaatccgcagctaaatccgtaggaaaaccttaaagttctagtaatggct 331  Q
    ||||||| |||||||||||||||||     |||||||| ||||||||| |||| ||||||  |||||||| || ||||  | ||||||||||||||||||    
T  9694191 aaatcctaggcaaaatctgcaggaaatgtgtttcctgcggaatttacataaaattccgcaaataaatccgcagaaaaagttaaaagttctagtaatggct 9694092  T
Q  332 ga 333  Q
    ||    
T  9694091 ga 9694090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 36008385 - 36008323
Alignment:
Q  18 agcttagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||||||||||||||     ||||||||||||| |||||| ||||||||||||||||    
T  36008385 agcttagtggctagaattcaccttataaggtgaataagtggggtgttcggggttcgaaccccg 36008323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 204
Target Start/End: Original strand, 2017402 - 2017463
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaa 204  Q
    |||||||||||| ||||||| ||||||  |||| ||||||||| ||||||||||| ||||||    
T  2017402 ttcacatttcctacagataaattcacatttcctacggatatatctttcctgcggaacctaaa 2017463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 43 - 76
Target Start/End: Complemental strand, 29430577 - 29430544
Alignment:
Q  43 tgaataagtagggtgtccggggttcgaaccccga 76  Q
    ||||||||||||||||||||||||||||||||||    
T  29430577 tgaataagtagggtgtccggggttcgaaccccga 29430544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 75
Target Start/End: Complemental strand, 53468781 - 53468744
Alignment:
Q  38 caaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||| |||||||||||||||||||||||||||||||    
T  53468781 caaggtaaataagtagggtgtccggggttcgaaccccg 53468744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 9924942 - 9924902
Alignment:
Q  37 acaaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  9924942 acaaggtgaataagtggagtgtccggggttcgaaccccgac 9924902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 29785235 - 29785199
Alignment:
Q  38 caaggtgaataagtagggtgtccggggttcgaacccc 74  Q
    |||||||||||||| ||||||||||||||||||||||    
T  29785235 caaggtgaataagtggggtgtccggggttcgaacccc 29785199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 47017957 - 47017993
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||||||| |||||||||||||||||||||||    
T  47017957 aaggtgaataagtggggtgtccggggttcgaaccccg 47017993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 49039455 - 49039491
Alignment:
Q  38 caaggtgaataagtagggtgtccggggttcgaacccc 74  Q
    |||||||||||||| ||||||||||||||||||||||    
T  49039455 caaggtgaataagtggggtgtccggggttcgaacccc 49039491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 6202688 - 6202653
Alignment:
Q  38 caaggtgaataagtagggtgtccggggttcgaaccc 73  Q
    |||| |||||||||||||||||||||||||||||||    
T  6202688 caagatgaataagtagggtgtccggggttcgaaccc 6202653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 42 - 77
Target Start/End: Complemental strand, 8690295 - 8690260
Alignment:
Q  42 gtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||| |||||||||||||||||||||||||    
T  8690295 gtgaataagtggggtgtccggggttcgaaccccgac 8690260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 70
Target Start/End: Complemental strand, 41943991 - 41943960
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaa 70  Q
    ||||||||||||||||||||||||||||||||    
T  41943991 aaggtgaataagtagggtgtccggggttcgaa 41943960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 77
Target Start/End: Complemental strand, 49319478 - 49319439
Alignment:
Q  38 caaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||||||| |||||||||||||| ||||||||||    
T  49319478 caaggtgaataagtggggtgtccggggttggaaccccgac 49319439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 3465689 - 3465635
Alignment:
Q  22 tagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaac 71  Q
    |||||||||||||||||     ||||||||||||| |||||||||||||||||||    
T  3465689 tagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaac 3465635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 3544421 - 3544479
Alignment:
Q  22 tagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||||||||||     || |||||||||||||| |||||||||||||||||||    
T  3544421 tagtggctagaattcaccttataatgtgaataagtagggagtccggggttcgaaccccg 3544479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 77
Target Start/End: Complemental strand, 12856268 - 12856230
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    ||||||||||||| ||||||||||||||||||| |||||    
T  12856268 aaggtgaataagtggggtgtccggggttcgaactccgac 12856230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 20753114 - 20753172
Alignment:
Q  22 tagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||||||||||     |||||||||||||  ||||||||||||||||||||||    
T  20753114 tagtggctagaattcaccttataaggtgaataagtgtggtgtccggggttcgaaccccg 20753172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 26347034 - 26347085
Alignment:
Q  22 tagtggctagaattcacaaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||||| ||||||  | || ||||||||||||||||||||||||||||    
T  26347034 tagtggctagaactcacaa--ttaaaaagtagggtgtccggggttcgaaccccg 26347085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 73
Target Start/End: Original strand, 28221318 - 28221352
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccc 73  Q
    ||||||||||||| |||||||||||||||||||||    
T  28221318 aaggtgaataagtggggtgtccggggttcgaaccc 28221352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 32006034 - 32005980
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcgga 197  Q
    ||||||||||||||| |||| ||||||  |||| ||||||||| |||||||||||    
T  32006034 ttcacatttcctgcaaataaattcacatttcctacggatatatctttcctgcgga 32005980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 36257800 - 36257742
Alignment:
Q  22 tagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||||||||||     || |||||||||| |||||||||||||||||||||||    
T  36257800 tagtggctagaattcactttttaaagtgaataagtggggtgtccggggttcgaaccccg 36257742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 77
Target Start/End: Original strand, 37032190 - 37032228
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    ||||||||||||| |||||||||||||||||| ||||||    
T  37032190 aaggtgaataagtggggtgtccggggttcgaatcccgac 37032228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 77
Target Start/End: Complemental strand, 38690750 - 38690712
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  38690750 aaggagaataagtggggtgtccggggttcgaaccccgac 38690712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 292
Target Start/End: Complemental strand, 40969286 - 40969256
Alignment:
Q  262 tttcctgcagaatttacacaaaaatccgcag 292  Q
    |||||||||||||||||||||||||||||||    
T  40969286 tttcctgcagaatttacacaaaaatccgcag 40969256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 77
Target Start/End: Original strand, 43362183 - 43362217
Alignment:
Q  43 tgaataagtagggtgtccggggttcgaaccccgac 77  Q
    ||||||||| |||||||||||||||||||||||||    
T  43362183 tgaataagtggggtgtccggggttcgaaccccgac 43362217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 77
Target Start/End: Complemental strand, 45350360 - 45350322
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    ||||||||||||| ||||||||||||||||||| |||||    
T  45350360 aaggtgaataagtggggtgtccggggttcgaactccgac 45350322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 77
Target Start/End: Complemental strand, 45359839 - 45359801
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    ||||||||||||| ||||||||||||||||||| |||||    
T  45359839 aaggtgaataagtggggtgtccggggttcgaactccgac 45359801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 4728709 - 4728648
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaa 204  Q
    ||||||||| |||||||||| ||||||  |||| | ||||||| ||||||||||| ||||||    
T  4728709 ttcacattttctgcagataatttcacatttcctacagatatatctttcctgcggaacctaaa 4728648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 75
Target Start/End: Original strand, 7768802 - 7768835
Alignment:
Q  42 gtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||| |||||||||||||||||||||||    
T  7768802 gtgaataagtggggtgtccggggttcgaaccccg 7768835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 75
Target Start/End: Complemental strand, 9693043 - 9693010
Alignment:
Q  42 gtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||| |||||||||||||||||||||||    
T  9693043 gtgaataagtggggtgtccggggttcgaaccccg 9693010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 75
Target Start/End: Complemental strand, 14149874 - 14149841
Alignment:
Q  42 gtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||| |||||||||||||||||||||||    
T  14149874 gtgaataagtggggtgtccggggttcgaaccccg 14149841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 75
Target Start/End: Original strand, 28520745 - 28520778
Alignment:
Q  42 gtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||| |||||||||||||||||||||||    
T  28520745 gtgaataagtggggtgtccggggttcgaaccccg 28520778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 30295619 - 30295562
Alignment:
Q  22 tagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaacccc 74  Q
    |||||||||||||||||     ||||||||||||| ||||||| ||||||||||||||    
T  30295619 tagtggctagaattcaccttctaaggtgaataagtggggtgtctggggttcgaacccc 30295562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 30324521 - 30324464
Alignment:
Q  22 tagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaacccc 74  Q
    |||||||||||||||||     ||||||||||||| ||||||| ||||||||||||||    
T  30324521 tagtggctagaattcaccttctaaggtgaataagtggggtgtctggggttcgaacccc 30324464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 72
Target Start/End: Complemental strand, 36576348 - 36576315
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaacc 72  Q
    ||||||||||||| ||||||||||||||||||||    
T  36576348 aaggtgaataagtggggtgtccggggttcgaacc 36576315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 40969375 - 40969314
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaa 204  Q
    |||| |||| |||||||||| ||||||  |||| ||||||||| ||||||||||| ||||||    
T  40969375 ttcatattttctgcagataatttcacatttcctacggatatatctttcctgcggaacctaaa 40969314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 76
Target Start/End: Original strand, 45847941 - 45847974
Alignment:
Q  43 tgaataagtagggtgtccggggttcgaaccccga 76  Q
    ||||||||| ||||||||||||||||||||||||    
T  45847941 tgaataagtggggtgtccggggttcgaaccccga 45847974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 75
Target Start/End: Original strand, 48968224 - 48968257
Alignment:
Q  42 gtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||| |||||||||||||||||||||||    
T  48968224 gtgaataagtggggtgtccggggttcgaaccccg 48968257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 75
Target Start/End: Complemental strand, 3442927 - 3442891
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  3442927 aaggtgaataagtggggtgtctggggttcgaaccccg 3442891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 71
Target Start/End: Original strand, 10757786 - 10757818
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaac 71  Q
    ||||||||||||| |||||||||||||||||||    
T  10757786 aaggtgaataagtggggtgtccggggttcgaac 10757818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 71
Target Start/End: Original strand, 10970957 - 10970989
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaac 71  Q
    ||||||||||||| |||||||||||||||||||    
T  10970957 aaggtgaataagtggggtgtccggggttcgaac 10970989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 12820394 - 12820454
Alignment:
Q  22 tagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||||||||||     ||||||||||||| |||||||| |||||| |||||||||    
T  12820394 tagtggctagaattcaccttataaggtgaataagtggggtgtccagggttctaaccccgac 12820454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 21023362 - 21023398
Alignment:
Q  38 caaggtgaataagtagggtgtccggggttcgaacccc 74  Q
    |||||||||||||| ||||||| ||||||||||||||    
T  21023362 caaggtgaataagtggggtgtcgggggttcgaacccc 21023398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 32885798 - 32885734
Alignment:
Q  18 agcttagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||| ||||||||||     ||||||||||||| ||||||||| ||||||||| |||||    
T  32885798 agcttagtggatagaattcaccttataaggtgaataagtggggtgtccgaggttcgaactccgac 32885734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 37274660 - 37274628
Alignment:
Q  43 tgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||| |||||||||||||||||||||||    
T  37274660 tgaataagtggggtgtccggggttcgaaccccg 37274628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 77
Target Start/End: Original strand, 42411471 - 42411503
Alignment:
Q  45 aataagtagggtgtccggggttcgaaccccgac 77  Q
    ||||||| |||||||||||||||||||||||||    
T  42411471 aataagtggggtgtccggggttcgaaccccgac 42411503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 46283202 - 46283170
Alignment:
Q  43 tgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||| |||||||||||||||||||||||    
T  46283202 tgaataagtggggtgtccggggttcgaaccccg 46283170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 53697991 - 53698027
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  53697991 aaggtaaataagtggggtgtccggggttcgaaccccg 53698027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 74
Target Start/End: Complemental strand, 53815777 - 53815745
Alignment:
Q  42 gtgaataagtagggtgtccggggttcgaacccc 74  Q
    |||||||||| ||||||||||||||||||||||    
T  53815777 gtgaataagtggggtgtccggggttcgaacccc 53815745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 5e-32; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 143 - 292
Target Start/End: Original strand, 4642002 - 4642154
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctg 242  Q
    |||||||||||||| ||||| |||| |  |||||||||||||| |||||||||||||||||||||||| ||||||||||||||| | ||||||||||||     
T  4642002 ttcacatttcctgcggataatttcatatttcctgcggatatatctttcctgcggatcctaaaatcctaaggtattacctcacctcgaaacctaaatcctt 4642101  T
Q  243 ggcaaaatctgcaggaa---catttcctgcagaatttacacaaaaatccgcag 292  Q
    | ||||||||||| |||    ||||||||   |||||||| ||||||||||||    
T  4642102 gacaaaatctgcaagaaatgtatttcctgtgaaatttacataaaaatccgcag 4642154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 150 - 259
Target Start/End: Complemental strand, 49898552 - 49898443
Alignment:
Q  150 ttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaaa 249  Q
    |||||||  |||| ||||||  ||||| |||||||| |||| ||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||    
T  49898552 ttcctgcgaataatttcacatttcctgtggatatatctttcttgcggatcctaaaatcctaaggtattacctcacctagggacctaaatccttggcaaaa 49898453  T
Q  250 tctgcaggaa 259  Q
    ||||||||||    
T  49898452 tctgcaggaa 49898443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 187 - 304
Target Start/End: Complemental strand, 24745551 - 24745431
Alignment:
Q  187 tttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaaatctgcaggaa---catttcctgcagaatttacacaaa 283  Q
    |||||||||||||||||||||||| |||||||||||||||   |||||||||||| |||||||||||||| ||     ||||||||||||||||||||||    
T  24745551 tttcctgcggatcctaaaatcctagggtattacctcaccttaaaacctaaatccttggcaaaatctgcagaaaatgtgtttcctgcagaatttacacaaa 24745452  T
Q  284 aatccgcagctaaatccgtag 304  Q
    || || ||| |||||||||||    
T  24745451 aaaccacaggtaaatccgtag 24745431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 228 - 329
Target Start/End: Original strand, 31844637 - 31844741
Alignment:
Q  228 ggaacctaaatcctgggcaaaatctgcaggaaca---tttcctgcagaatttacacaaaaatccgcagctaaatccgtaggaaaaccttaaagttctagt 324  Q
    |||||||||||||| |||||||||||||||||     |||||||| ||||||||||||||||| |||| |||||||||||||||| || ||| |||||||    
T  31844637 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaaaatctgcaggtaaatccgtaggaaaagctaaaatttctagt 31844736  T
Q  325 aatgg 329  Q
    |||||    
T  31844737 aatgg 31844741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 24646192 - 24646120
Alignment:
Q  187 tttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaaatctgcaggaa 259  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||||||||||||| |||||||||||||||||    
T  24646192 tttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatccttggcaaaatctgcaggaa 24646120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 179 - 259
Target Start/End: Complemental strand, 34459256 - 34459176
Alignment:
Q  179 gatatatttttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaaatctgcaggaa 259  Q
    ||||||| |||| ||||||||||||||||||| |||||||||||||||  |||| |||||||| |||||||||||||||||    
T  34459256 gatatatctttcttgcggatcctaaaatcctaaggtattacctcacctgagaacttaaatccttggcaaaatctgcaggaa 34459176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 228 - 329
Target Start/End: Complemental strand, 8239391 - 8239285
Alignment:
Q  228 ggaacctaaatcctgggcaaaatctgcaggaac-----atttcctgcagaatttacacaaaaatccgcagctaaatccgtaggaaaaccttaaagttcta 322  Q
    |||||||||||||| |||||||||||||||||      ||||||||| |||||||||||||||||||||| |||||| | ||||||| || ||| |||||    
T  8239391 ggaacctaaatccttggcaaaatctgcaggaaatatatatttcctgcggaatttacacaaaaatccgcaggtaaatctgcaggaaaagctaaaaattcta 8239292  T
Q  323 gtaatgg 329  Q
    |||||||    
T  8239291 gtaatgg 8239285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 228 - 329
Target Start/End: Complemental strand, 14727428 - 14727324
Alignment:
Q  228 ggaacctaaatcctgggcaaaatctgcaggaaca---tttcctgcagaatttacacaaaaatccgcagctaaatccgtaggaaaaccttaaagttctagt 324  Q
    |||||||||||||| |||||||||||||||||     |||||||| |||||||||||||| ||||||| |||||||| ||||||| || ||| |||||||    
T  14727428 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaaactccgcaggtaaatccgcaggaaaagctaaaaattctagt 14727329  T
Q  325 aatgg 329  Q
    |||||    
T  14727328 aatgg 14727324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 172 - 257
Target Start/End: Original strand, 6802057 - 6802142
Alignment:
Q  172 tcctgcggatatatttttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaaatctgcagg 257  Q
    |||||| ||||||  ||||||| ||||||||||||| || ||||||||||||||| |||||||||||||| ||||||||| |||||    
T  6802057 tcctgcagatatacctttcctgaggatcctaaaatcgtaaggtattacctcacctgggaacctaaatccttggcaaaatccgcagg 6802142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 178 - 258
Target Start/End: Complemental strand, 9527193 - 9527113
Alignment:
Q  178 ggatatatttttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaaatctgcagga 258  Q
    |||||||| ||||  | |||||||||||||||| | ||||||||||||| |||||||||||||| ||||||||||||||||    
T  9527193 ggatatatctttctggaggatcctaaaatcctaagatattacctcacctgggaacctaaatccttggcaaaatctgcagga 9527113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 214 - 331
Target Start/End: Original strand, 48940419 - 48940539
Alignment:
Q  214 tattacctcacctaggaacctaaatcctgggcaaaatctgcaggaaca---tttcctgcagaatttacacaaaaatccgcagctaaatccgtaggaaaac 310  Q
    |||||||||||||   || ||||||||| | ||||||||||| |||     |||||||| |||||||||||||||||||||  |||||||| |||||||     
T  48940419 tattacctcacctgaaaagctaaatccttgacaaaatctgcatgaaatgtgtttcctgcggaatttacacaaaaatccgcaaataaatccgcaggaaaag 48940518  T
Q  311 cttaaagttctagtaatggct 331  Q
    || ||||||||||||||||||    
T  48940519 ctaaaagttctagtaatggct 48940539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 228 - 292
Target Start/End: Original strand, 37154007 - 37154074
Alignment:
Q  228 ggaacctaaatcctgggcaaaatctgcaggaa---catttcctgcagaatttacacaaaaatccgcag 292  Q
    |||||||||||||| |||||||||||||||||   |||||||||| ||||||||||||||||||||||    
T  37154007 ggaacctaaatccttggcaaaatctgcaggaaatacatttcctgcggaatttacacaaaaatccgcag 37154074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 228 - 292
Target Start/End: Complemental strand, 44305510 - 44305443
Alignment:
Q  228 ggaacctaaatcctgggcaaaatctgcaggaa---catttcctgcagaatttacacaaaaatccgcag 292  Q
    |||||||||||||| |||||||||||||||||   |||||||||| ||||||||||||||||||||||    
T  44305510 ggaacctaaatccttggcaaaatctgcaggaaatacatttcctgcggaatttacacaaaaatccgcag 44305443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 228 - 329
Target Start/End: Complemental strand, 6331784 - 6331680
Alignment:
Q  228 ggaacctaaatcctgggcaaaatctgcaggaaca---tttcctgcagaatttacacaaaaatccgcagctaaatccgtaggaaaaccttaaagttctagt 324  Q
    |||||||||||||| ||||||||||| |||||     |||||||| ||||||||||||||||||| || |||| ||| ||||||| || ||| |||||||    
T  6331784 ggaacctaaatccttggcaaaatctgtaggaaatgtgtttcctgcggaatttacacaaaaatccggaggtaaacccgcaggaaaagctaaaatttctagt 6331685  T
Q  325 aatgg 329  Q
    |||||    
T  6331684 aatgg 6331680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 11405566 - 11405502
Alignment:
Q  18 agcttagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||||||||||||||     ||||||||||||| |||||||||||||||||||||||||    
T  11405566 agcttagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccgac 11405502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 15774297 - 15774361
Alignment:
Q  18 agcttagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||||||||||||||     ||||||||||||| |||||||||||||||||||||||||    
T  15774297 agcttagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccgac 15774361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 229 - 292
Target Start/End: Complemental strand, 25007561 - 25007495
Alignment:
Q  229 gaacctaaatcctgggcaaaatctgcagga---acatttcctgcagaatttacacaaaaatccgcag 292  Q
    ||||||||||||| ||||||||||||||||   ||||||| ||| ||||||||||||||||||||||    
T  25007561 gaacctaaatccttggcaaaatctgcaggaaatacatttcttgcggaatttacacaaaaatccgcag 25007495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 77
Target Start/End: Original strand, 9768819 - 9768858
Alignment:
Q  38 caaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  9768819 caaggtgaataagtggggtgtccggggttcgaaccccgac 9768858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 77
Target Start/End: Original strand, 14262736 - 14262770
Alignment:
Q  43 tgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||||||||||||||||||||||||||||    
T  14262736 tgaataagtagggtgtccggggttcgaaccccgac 14262770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 77
Target Start/End: Complemental strand, 19424130 - 19424092
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  19424130 aaggtgaataagtggggtgtccggggttcgaaccccgac 19424092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 14727480 - 14727419
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaa 204  Q
    |||||||||||||||||||| ||||||  |||| | ||||||| ||||||||||| ||||||    
T  14727480 ttcacatttcctgcagataatttcacatttcctacagatatatctttcctgcggaacctaaa 14727419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 25007614 - 25007553
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaa 204  Q
    |||||||||||||||||||| ||||||  |||| ||||||||| |||||||| || ||||||    
T  25007614 ttcacatttcctgcagataaattcacatttcctacggatatatctttcctgcagaacctaaa 25007553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 204
Target Start/End: Original strand, 27583978 - 27584039
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaa 204  Q
    |||||||||||||||||||| ||||||  |||| ||||||||| ||||||| ||| ||||||    
T  27583978 ttcacatttcctgcagataatttcacatttcctacggatatatctttcctggggaacctaaa 27584039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 204
Target Start/End: Original strand, 37153955 - 37154016
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaa 204  Q
    |||||||||||||||||||| ||||||  |||| ||||||||| ||||||| ||| ||||||    
T  37153955 ttcacatttcctgcagataaattcacatttcctacggatatatctttcctgtggaacctaaa 37154016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 44305562 - 44305501
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaa 204  Q
    |||||||||||||||||||| ||||||  |||| ||||||||| ||||||| ||| ||||||    
T  44305562 ttcacatttcctgcagataaattcacatttcctacggatatatctttcctgtggaacctaaa 44305501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 75
Target Start/End: Original strand, 50199486 - 50199523
Alignment:
Q  38 caaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||||||| |||||||||||||||||||||||    
T  50199486 caaggtgaataagtggggtgtccggggttcgaaccccg 50199523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 9769590 - 9769626
Alignment:
Q  38 caaggtgaataagtagggtgtccggggttcgaacccc 74  Q
    |||||||||||||| ||||||||||||||||||||||    
T  9769590 caaggtgaataagtggggtgtccggggttcgaacccc 9769626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 37203268 - 37203236
Alignment:
Q  43 tgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||||||||||||||||||||||||||    
T  37203268 tgaataagtagggtgtccggggttcgaaccccg 37203236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 75
Target Start/End: Complemental strand, 37733839 - 37733803
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||||||| |||||||||||||||||||||||    
T  37733839 aaggtgaataagtggggtgtccggggttcgaaccccg 37733803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 77
Target Start/End: Original strand, 2903037 - 2903076
Alignment:
Q  38 caaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  2903037 caaggtgaataagtggggtgttcggggttcgaaccccgac 2903076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 42 - 77
Target Start/End: Complemental strand, 29491551 - 29491516
Alignment:
Q  42 gtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||| |||||||||||||||||||||||||    
T  29491551 gtgaataagtggggtgtccggggttcgaaccccgac 29491516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 74
Target Start/End: Complemental strand, 32635224 - 32635189
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaacccc 74  Q
    ||||||||||||| ||||||||||||||||||||||    
T  32635224 aaggtgaataagtggggtgtccggggttcgaacccc 32635189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 77
Target Start/End: Complemental strand, 41677145 - 41677106
Alignment:
Q  38 caaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||||||| |||||||||| ||||||||||||||    
T  41677145 caaggtgaataagtggggtgtccggagttcgaaccccgac 41677106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 77
Target Start/End: Original strand, 48260199 - 48260238
Alignment:
Q  38 caaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||||||| ||||||||||||||||||| |||||    
T  48260199 caaggtgaataagtggggtgtccggggttcgaactccgac 48260238  T

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Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 32711133 - 32711191
Alignment:
Q  22 tagtggctagaattcac-----aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||||||||||     ||||||||||||| ||||||| |||||||||||||||    
T  32711133 tagtggctagaattcaccttataaggtgaataagtggggtgtctggggttcgaaccccg 32711191  T

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Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 76
Target Start/End: Complemental strand, 33844698 - 33844664
Alignment:
Q  42 gtgaataagtagggtgtccggggttcgaaccccga 76  Q
    |||||||||| ||||||||||||||||||||||||    
T  33844698 gtgaataagtggggtgtccggggttcgaaccccga 33844664  T

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Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 76
Target Start/End: Original strand, 33949280 - 33949314
Alignment:
Q  42 gtgaataagtagggtgtccggggttcgaaccccga 76  Q
    |||||||||| ||||||||||||||||||||||||    
T  33949280 gtgaataagtggggtgtccggggttcgaaccccga 33949314  T

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Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 77
Target Start/End: Original strand, 49251406 - 49251444
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    ||||||||||||| ||||||| |||||||||||||||||    
T  49251406 aaggtgaataagtggggtgtctggggttcgaaccccgac 49251444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 204
Target Start/End: Original strand, 1428384 - 1428445
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaa 204  Q
    ||||||||| |||||||||  ||||||  |||| ||||||||| ||||||||||| ||||||    
T  1428384 ttcacattttctgcagatagattcacatttcctacggatatatctttcctgcggaacctaaa 1428445  T

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Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 75
Target Start/End: Original strand, 3341746 - 3341783
Alignment:
Q  38 caaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  3341746 caaggtgaataagtggggtgtccggggttcgatccccg 3341783  T

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Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 75
Target Start/End: Original strand, 9976394 - 9976431
Alignment:
Q  38 caaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  9976394 caaggtgaataagtggggtgtccggagttcgaaccccg 9976431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 75
Target Start/End: Complemental strand, 17350142 - 17350109
Alignment:
Q  42 gtgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||| |||||||||||||||||||||||    
T  17350142 gtgaataagtggggtgtccggggttcgaaccccg 17350109  T

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Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 76
Target Start/End: Complemental strand, 27745241 - 27745204
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccga 76  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  27745241 aaggtgaataaatggggtgtccggggttcgaaccccga 27745204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 77
Target Start/End: Original strand, 41833547 - 41833584
Alignment:
Q  40 aggtgaataagtagggtgtccggggttcgaaccccgac 77  Q
    |||||||||||| |||||| ||||||||||||||||||    
T  41833547 aggtgaataagtggggtgttcggggttcgaaccccgac 41833584  T

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Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 74
Target Start/End: Complemental strand, 12553275 - 12553243
Alignment:
Q  42 gtgaataagtagggtgtccggggttcgaacccc 74  Q
    |||||||||| ||||||||||||||||||||||    
T  12553275 gtgaataagtggggtgtccggggttcgaacccc 12553243  T

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Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 15368885 - 15368853
Alignment:
Q  43 tgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||| |||||||||||||||||||||||    
T  15368885 tgaataagtggggtgtccggggttcgaaccccg 15368853  T

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Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 75
Target Start/End: Original strand, 17871096 - 17871128
Alignment:
Q  43 tgaataagtagggtgtccggggttcgaaccccg 75  Q
    |||||||||||||||| ||||||||||||||||    
T  17871096 tgaataagtagggtgttcggggttcgaaccccg 17871128  T

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Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 75
Target Start/End: Original strand, 24134639 - 24134671
Alignment:
Q  43 tgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||| |||||||||||||||||||||||    
T  24134639 tgaataagtggggtgtccggggttcgaaccccg 24134671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 24168590 - 24168626
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  24168590 aaggtgaataagtggggtgtctggggttcgaaccccg 24168626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 75
Target Start/End: Complemental strand, 29332368 - 29332332
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  29332368 aaggtgaataagtggggtgtccggggttcaaaccccg 29332332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 178 - 327
Target Start/End: Original strand, 112184 - 112333
Alignment:
Q  178 ggatatatttttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaaatctgcaggaacatttcctgcagaattta 277  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||| ||  ||| ||||||||| ||   |  |||  |||||||    
T  112184 ggatatatctttcctgcggatcctaaaatcctatggtattacctcatctgggaacctaaattcttagcagaatctgcagaaaatgtgtctgtggaattta 112283  T
Q  278 cacaaaaatccgcagctaaatccgtaggaaaaccttaaagttctagtaat 327  Q
    ||||||||| ||||| ||||||||||||||||  | ||||||||||||||    
T  112284 cacaaaaattcgcaggtaaatccgtaggaaaagttaaaagttctagtaat 112333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 187 - 327
Target Start/End: Original strand, 109275 - 109418
Alignment:
Q  187 tttcctgcggatcctaaaatcctatggtattacctcacctaggaacctaaatcctgggcaaaatctgcaggaacat----ttcctgcagaatttacacaa 282  Q
    ||||||| |||||||||||||||||||||||| ||||||| ||||||||||| ||  ||||||||||||| |||||    || |||| ||||||||||||    
T  109275 tttcctgtggatcctaaaatcctatggtattatctcacctgggaacctaaattcttagcaaaatctgcag-aacatgtgttttctgcggaatttacacaa 109373  T
Q  283 aaatccgcagctaaatccgtaggaaaaccttaaagttctagtaat 327  Q
    |||| ||||| |||||||  |||||||  | ||||||||||||||    
T  109374 aaattcgcaggtaaatccacaggaaaagttaaaagttctagtaat 109418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 332
Target Start/End: Complemental strand, 4202 - 4102
Alignment:
Q  235 aaatcctgggcaaaatctgcaggaaca---tttcctgcagaatttacacaaaaatccgcagctaaatccgtaggaaaaccttaaagttctagtaatggct 331  Q
    |||||||||||||||||||||||||     |||||| | ||||||||| ||| |||||||| ||||| || ||||||| || ||||||||||||||||||    
T  4202 aaatcctgggcaaaatctgcaggaaatgtgtttcctacggaatttacataaacatccgcaggtaaattcgcaggaaaagctaaaagttctagtaatggct 4103  T
Q  332 g 332  Q
    |    
T  4102 g 4102  T

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Target: scaffold0191 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 16946 - 16896
Alignment:
Q  22 tagtggctagaattcacaaggtgaataagtagggtgtccggggttcgaaccc 73  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  16946 tagtggctagaattca-aaggtgaataagtagggtgttcggggttcgaaccc 16896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 292
Target Start/End: Complemental strand, 7009 - 6942
Alignment:
Q  228 ggaacctaaatcctgggcaaaatctgcaggaa---catttcctgcagaatttacacaaaaatccgcag 292  Q
    |||||||||||||| |||||||||||||||||   |||||||| | |||||||||||| |||||||||    
T  7009 ggaacctaaatccttggcaaaatctgcaggaaatgcatttccttcggaatttacacaataatccgcag 6942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 292
Target Start/End: Complemental strand, 11622 - 11555
Alignment:
Q  228 ggaacctaaatcctgggcaaaatctgcaggaa---catttcctgcagaatttacacaaaaatccgcag 292  Q
    |||||||||||||| |||||||||||||||||   ||||| |||| |||||||||||| |||||||||    
T  11622 ggaacctaaatccttggcaaaatctgcaggaaatgcattttctgcggaatttacacaataatccgcag 11555  T

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Target: scaffold0075; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 11674 - 11613
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcggatcctaaa 204  Q
    |||||||||||||||||||| ||||||  |||| ||||||||| ||||||||||| ||||||    
T  11674 ttcacatttcctgcagataaattcacatttcctacggatatatctttcctgcggaacctaaa 11613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 1846 - 1792
Alignment:
Q  143 ttcacatttcctgcagataacttcacaaatcctgcggatatatttttcctgcgga 197  Q
    |||||||||||||||||||| ||||||  |||| ||||||||| |||||||||||    
T  1846 ttcacatttcctgcagataagttcacatttcctacggatatatctttcctgcgga 1792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 74
Target Start/End: Complemental strand, 8644 - 8609
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaacccc 74  Q
    |||||||||||||||||||| |||||||||||||||    
T  8644 aaggtgaataagtagggtgttcggggttcgaacccc 8609  T

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Target: scaffold0219 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 75
Target Start/End: Original strand, 6642 - 6680
Alignment:
Q  37 acaaggtgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||||||| | |||||||||||||||||||||||    
T  6642 acaaggtgaataattggggtgtccggggttcgaaccccg 6680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 76
Target Start/End: Complemental strand, 16149 - 16112
Alignment:
Q  39 aaggtgaataagtagggtgtccggggttcgaaccccga 76  Q
    |||||||||||||||| |||||||||||||||| ||||    
T  16149 aaggtgaataagtaggatgtccggggttcgaactccga 16112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 1124 - 1088
Alignment:
Q  38 caaggtgaataagtagggtgtccggggttcgaacccc 74  Q
    |||||||||||||| ||||||| ||||||||||||||    
T  1124 caaggtgaataagtggggtgtctggggttcgaacccc 1088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 419792 - 419760
Alignment:
Q  43 tgaataagtagggtgtccggggttcgaaccccg 75  Q
    ||||||||| |||||||||||||||||||||||    
T  419792 tgaataagtggggtgtccggggttcgaaccccg 419760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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