View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21330_high_2 (Length: 635)
Name: NF21330_high_2
Description: NF21330
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21330_high_2 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 577; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 577; E-Value: 0
Query Start/End: Original strand, 47 - 635
Target Start/End: Original strand, 42406588 - 42407176
Alignment:
| Q |
47 |
caatacaagaaatcaagctaggaacacatcctttgctccacaactcataaataacctctaaagctttaaaagcctctcctttcccacacaaaatttccac |
146 |
Q |
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| T |
42406588 |
caatacaagaaatcaagctagggacacatcctttgctccacaactcataaataacctctaaagctttaaaagcctctcctttcccacacaaaatttccac |
42406687 |
T |
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| Q |
147 |
caaaacaaaataatcataacctttaggcaaaacccctctcttagaaaactccatcaacaaatcacacacctgcgaaaccctcccttccttacaaagccca |
246 |
Q |
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| T |
42406688 |
caaaacaaaataatcataacctttaggcaaaacccctctcttagaaaactccatcaacaaatcacacacctgcgaaaccctcccttccttacaaagccca |
42406787 |
T |
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| Q |
247 |
tcaaccaaaatctcacaagtaacatcagaaagctgacatcccaattcaatcatctcataaaccatcccaatcccttcatcaactctacattccctaaaca |
346 |
Q |
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| T |
42406788 |
tcaaccaaaatctcacaagtaacatcagaaagctgacatcccaattcaatcatctcataaaccatcccaatcccttcatcaactctacattccctaaaca |
42406887 |
T |
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| Q |
347 |
accctttaatcaaagtattaaaagtaacaacatttggatgacaccccattttcctcatttcatcaaacatctccaatgcaaaaccaaatttaaaatccct |
446 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42406888 |
accctttaatcaaagtattaaaagtaacaacatttggatgacaccccattttcctcatttcatcaaacatctccaatgcaaaaccaaatttaaaatccct |
42406987 |
T |
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| Q |
447 |
acaataaccactaatcaaaatattaaaagtaaacacatcaggtttaatcctatccttaaccatctgattataaaactcaaaagctctatcaaatctacca |
546 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42406988 |
acaataaccactaatcaaaatattaaaagtaaacacatcaggcttaatcctatccttaaccatctgattataaaactcaaaagctctatcaaatctacca |
42407087 |
T |
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| Q |
547 |
gatttaacaaacccatgaatcaaaatattacaaaccgaaacactcggttttccgtcaattaacctacgcataacattaaaagcataaac |
635 |
Q |
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| T |
42407088 |
gatttaacaaacccatgaatcaaaatattacaaaccgaaacactcggttttccgtcaattaacctgcgcataacattaaaagcataaac |
42407176 |
T |
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