View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21332_high_4 (Length: 290)
Name: NF21332_high_4
Description: NF21332
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21332_high_4 |
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Alignment Details
Target: chr2 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 17 - 232
Target Start/End: Original strand, 15889709 - 15889924
Alignment:
| Q |
17 |
actttcatccaataaaatccaagaattgattaaaatttaacaaataatcaatacaagtatattcaaattgatgaaactctagaagaacctggtttgtttc |
116 |
Q |
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||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |
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| T |
15889709 |
actttcatccaataaaatcagaaaattgattaaaatttaacaaataatcaatacaagtatgttcaaattgatgaaactctagaagaacctgctttgtttc |
15889808 |
T |
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| Q |
117 |
ttggagctcgacgagagataagcccgaaaacttgcttaatattaatttgatgacctctgagaaaacaactctcatttgatgaaaatcttctattacctgc |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15889809 |
ttggagctcgacgagagataagcccgaaaacttgcttaatattaatttgatgacctctgagaaaacaactctcatttgatgaaaatcttctattacctgc |
15889908 |
T |
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| Q |
217 |
tataagattcttcaag |
232 |
Q |
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|||||||||||||||| |
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| T |
15889909 |
tataagattcttcaag |
15889924 |
T |
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