View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21333_low_9 (Length: 271)
Name: NF21333_low_9
Description: NF21333
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21333_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 19 - 269
Target Start/End: Complemental strand, 5974111 - 5973861
Alignment:
| Q |
19 |
ggaacaagccactggccactgcttgtgtttggttttcttctttcaaaacttcaatttttctttcaagccttatcaagattctagaatctagactctatgc |
118 |
Q |
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| T |
5974111 |
ggaacaagccactggccactgcttgtgtttggttttcttctttcaaaccttcgatatttctttcaagccttattaagattctagaatctagactctatgc |
5974012 |
T |
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| Q |
119 |
tttacataaaaggtacagtttagcttcactctgcaagttaataactaattcctccataaaaaccacttatgttgcttccttgtttcaacaaacaacacca |
218 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
5974011 |
tttacataaaaggtacagtttagcttcactctgcaagttaataactaattcctccataaaaaccacttatgttgcttccttgtttcaacaaaccacacca |
5973912 |
T |
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| Q |
219 |
tcatctcacatcaattgaattcaccacaaatccagcagtattatctaccca |
269 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||| ||||| |
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| T |
5973911 |
tcatctcacatcaattgaattcaccacaaatccagcagtgttatccaccca |
5973861 |
T |
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