View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21338_low_5 (Length: 517)

Name: NF21338_low_5
Description: NF21338
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21338_low_5
NF21338_low_5
[»] chr3 (57 HSPs)
chr3 (126-517)||(16743991-16744382)
chr3 (130-393)||(17912483-17912745)
chr3 (142-467)||(13838905-13839232)
chr3 (130-467)||(14842487-14842825)
chr3 (126-467)||(12030073-12030415)
chr3 (130-467)||(2049809-2050147)
chr3 (126-419)||(15858996-15859292)
chr3 (227-393)||(2449238-2449404)
chr3 (131-403)||(51158008-51158281)
chr3 (331-507)||(19231982-19232161)
chr3 (126-386)||(15936634-15936895)
chr3 (134-386)||(15938476-15938729)
chr3 (347-467)||(19260749-19260869)
chr3 (261-393)||(13975722-13975853)
chr3 (261-393)||(45860937-45861068)
chr3 (246-393)||(13954890-13955036)
chr3 (126-468)||(15614829-15615170)
chr3 (130-359)||(16821138-16821369)
chr3 (432-507)||(15857123-15857198)
chr3 (126-381)||(55316214-55316471)
chr3 (435-507)||(3992873-3992945)
chr3 (435-507)||(55513193-55513265)
chr3 (126-381)||(41270070-41270327)
chr3 (435-507)||(2844514-2844586)
chr3 (435-507)||(54037984-54038056)
chr3 (435-490)||(17955861-17955916)
chr3 (126-240)||(47984645-47984759)
chr3 (126-240)||(48003219-48003333)
chr3 (1-61)||(2449402-2449462)
chr3 (435-507)||(7854305-7854377)
chr3 (1-61)||(16744447-16744507)
chr3 (435-496)||(45581954-45582016)
chr3 (126-240)||(47993932-47994046)
chr3 (126-240)||(48012505-48012619)
chr3 (336-377)||(14080715-14080756)
chr3 (126-207)||(15468520-15468601)
chr3 (451-507)||(17205019-17205075)
chr3 (297-467)||(54651625-54651796)
chr3 (453-507)||(12031849-12031903)
chr3 (127-466)||(12264710-12265053)
chr3 (126-207)||(22275204-22275285)
chr3 (435-467)||(13954804-13954836)
chr3 (451-507)||(17191879-17191935)
chr3 (451-507)||(38810869-38810925)
chr3 (435-467)||(45861122-45861154)
chr3 (296-386)||(11986173-11986263)
chr3 (435-467)||(2449152-2449184)
chr3 (451-507)||(3576291-3576347)
chr3 (127-242)||(11329098-11329214)
chr3 (451-507)||(13301324-13301380)
chr3 (451-507)||(13311980-13312036)
chr3 (435-467)||(16261777-16261809)
chr3 (435-467)||(16933869-16933901)
chr3 (435-467)||(17912398-17912430)
chr3 (435-467)||(23492696-23492728)
chr3 (435-467)||(38168237-38168269)
chr3 (435-467)||(53771365-53771397)
[»] chr8 (38 HSPs)
chr8 (126-393)||(22907214-22907481)
chr8 (130-507)||(16404860-16405236)
chr8 (131-467)||(16193643-16193979)
chr8 (126-467)||(43373392-43373736)
chr8 (142-467)||(24928716-24929043)
chr8 (227-393)||(5238184-5238350)
chr8 (227-393)||(24661248-24661414)
chr8 (227-393)||(43685643-43685809)
chr8 (126-381)||(6774258-6774514)
chr8 (142-393)||(17345581-17345832)
chr8 (126-381)||(24548977-24549233)
chr8 (126-377)||(21844576-21844829)
chr8 (126-377)||(21851969-21852222)
chr8 (130-381)||(30120721-30120974)
chr8 (435-507)||(274766-274838)
chr8 (435-507)||(641011-641083)
chr8 (435-507)||(826817-826889)
chr8 (435-507)||(24716722-24716794)
chr8 (1-61)||(5238126-5238186)
chr8 (1-61)||(24661412-24661472)
chr8 (126-318)||(222754-222948)
chr8 (126-318)||(736377-736571)
chr8 (126-318)||(860272-860466)
chr8 (1-61)||(22907546-22907606)
chr8 (1-61)||(43685585-43685645)
chr8 (126-381)||(16674392-16674649)
chr8 (435-507)||(39115598-39115670)
chr8 (153-242)||(23837219-23837308)
chr8 (451-507)||(17285543-17285599)
chr8 (451-507)||(21198006-21198062)
chr8 (11-57)||(22321608-22321654)
chr8 (336-377)||(23149985-23150026)
chr8 (336-377)||(23226076-23226117)
chr8 (435-467)||(5238404-5238436)
chr8 (435-467)||(22907128-22907160)
chr8 (435-467)||(24385652-24385684)
chr8 (435-467)||(24661162-24661194)
chr8 (435-467)||(43685863-43685895)
[»] chr4 (35 HSPs)
chr4 (126-393)||(26680196-26680463)
chr4 (126-505)||(54118130-54118512)
chr4 (126-467)||(13246425-13246769)
chr4 (130-467)||(15675009-15675353)
chr4 (261-467)||(122020-122226)
chr4 (227-393)||(10488659-10488825)
chr4 (227-393)||(16327926-16328092)
chr4 (195-467)||(10104170-10104449)
chr4 (130-366)||(31115628-31115865)
chr4 (246-393)||(13048221-13048368)
chr4 (126-377)||(10644214-10644467)
chr4 (331-467)||(33240901-33241043)
chr4 (126-381)||(47357649-47357906)
chr4 (435-507)||(25119067-25119139)
chr4 (1-61)||(26680071-26680131)
chr4 (195-377)||(40885570-40885753)
chr4 (130-229)||(111394-111493)
chr4 (1-61)||(10488601-10488661)
chr4 (435-507)||(5682388-5682460)
chr4 (361-467)||(31132545-31132657)
chr4 (130-176)||(10104449-10104495)
chr4 (16-61)||(16328090-16328135)
chr4 (153-242)||(41166083-41166172)
chr4 (451-507)||(41165809-41165865)
chr4 (451-507)||(47534934-47534990)
chr4 (155-242)||(7185981-7186068)
chr4 (155-242)||(15044851-15044938)
chr4 (261-467)||(7850131-7850346)
chr4 (336-376)||(13809511-13809551)
chr4 (435-467)||(14952085-14952117)
chr4 (435-467)||(15135907-15135939)
chr4 (435-467)||(15272211-15272243)
chr4 (435-467)||(16327840-16327872)
chr4 (435-467)||(16609013-16609045)
chr4 (435-467)||(26680517-26680549)
[»] scaffold0078 (4 HSPs)
scaffold0078 (126-393)||(37066-37333)
scaffold0078 (435-507)||(41632-41704)
scaffold0078 (17-61)||(37398-37442)
scaffold0078 (435-467)||(36980-37012)
[»] chr7 (41 HSPs)
chr7 (126-393)||(7293012-7293279)
chr7 (130-507)||(3059965-3060343)
chr7 (126-467)||(16211761-16212103)
chr7 (126-467)||(13036938-13037282)
chr7 (126-467)||(11580661-11581007)
chr7 (126-467)||(36052662-36053003)
chr7 (227-393)||(11516324-11516490)
chr7 (227-393)||(15441564-15441730)
chr7 (227-393)||(30262129-30262295)
chr7 (130-393)||(47481031-47481295)
chr7 (126-386)||(18253842-18254103)
chr7 (126-392)||(13321009-13321278)
chr7 (130-375)||(16478968-16479214)
chr7 (261-393)||(25292338-25292470)
chr7 (126-377)||(13572671-13572924)
chr7 (126-381)||(13911024-13911282)
chr7 (126-381)||(10989405-10989661)
chr7 (265-465)||(295893-296094)
chr7 (435-507)||(32493906-32493978)
chr7 (1-61)||(15441728-15441788)
chr7 (1-61)||(30262293-30262353)
chr7 (130-382)||(2437456-2437710)
chr7 (435-507)||(126738-126810)
chr7 (435-500)||(1936884-1936949)
chr7 (1-61)||(7292887-7292947)
chr7 (1-61)||(11516266-11516326)
chr7 (435-507)||(111129-111201)
chr7 (351-393)||(14113989-14114031)
chr7 (351-393)||(14423639-14423681)
chr7 (451-507)||(13377867-13377923)
chr7 (451-507)||(13389693-13389749)
chr7 (436-507)||(7283916-7283987)
chr7 (452-507)||(16919870-16919925)
chr7 (297-377)||(16914928-16915009)
chr7 (435-467)||(2029244-2029276)
chr7 (435-467)||(7293333-7293365)
chr7 (435-467)||(11516544-11516576)
chr7 (435-467)||(14113903-14113935)
chr7 (435-467)||(15441478-15441510)
chr7 (435-467)||(30262043-30262075)
chr7 (435-467)||(42056188-42056220)
[»] chr1 (23 HSPs)
chr1 (130-517)||(41394221-41394609)
chr1 (126-467)||(20445674-20446019)
chr1 (126-467)||(20931340-20931682)
chr1 (126-467)||(37844374-37844719)
chr1 (126-467)||(20531439-20531783)
chr1 (126-467)||(20913032-20913367)
chr1 (126-467)||(20893551-20893894)
chr1 (227-393)||(51452589-51452755)
chr1 (130-466)||(22227808-22228146)
chr1 (130-466)||(22232505-22232843)
chr1 (126-381)||(2116249-2116506)
chr1 (261-468)||(45051554-45051759)
chr1 (435-507)||(21860334-21860406)
chr1 (435-507)||(44034831-44034903)
chr1 (126-381)||(5072388-5072645)
chr1 (126-381)||(18601118-18601375)
chr1 (1-61)||(51452531-51452591)
chr1 (437-507)||(27675120-27675190)
chr1 (450-507)||(41218743-41218800)
chr1 (126-185)||(45051437-45051496)
chr1 (451-507)||(13376712-13376768)
chr1 (451-507)||(20177513-20177569)
chr1 (336-377)||(22143361-22143402)
[»] chr2 (32 HSPs)
chr2 (126-505)||(19794591-19794972)
chr2 (130-507)||(43642841-43643221)
chr2 (126-467)||(36982364-36982709)
chr2 (130-507)||(20627198-20627577)
chr2 (126-467)||(462733-463075)
chr2 (126-467)||(8891237-8891581)
chr2 (227-393)||(19689401-19689567)
chr2 (227-393)||(23820168-23820334)
chr2 (130-467)||(24341309-24341653)
chr2 (227-393)||(14906440-14906606)
chr2 (227-393)||(20015108-20015274)
chr2 (126-393)||(25265390-25265658)
chr2 (261-393)||(17396653-17396784)
chr2 (130-343)||(7507894-7508108)
chr2 (126-381)||(19886661-19886918)
chr2 (371-467)||(22863169-22863267)
chr2 (435-507)||(22275045-22275117)
chr2 (435-507)||(22284278-22284350)
chr2 (436-507)||(15633538-15633609)
chr2 (1-61)||(14906604-14906664)
chr2 (1-61)||(20015050-20015110)
chr2 (1-61)||(23820110-23820170)
chr2 (451-507)||(43646232-43646288)
chr2 (26-61)||(19689565-19689600)
chr2 (435-467)||(17396567-17396599)
chr2 (153-209)||(19669279-19669335)
chr2 (456-507)||(19660221-19660272)
chr2 (435-468)||(19689314-19689347)
chr2 (435-467)||(9652796-9652828)
chr2 (435-467)||(14906354-14906386)
chr2 (435-467)||(23820388-23820420)
chr2 (451-507)||(25305769-25305825)
[»] scaffold0266 (2 HSPs)
scaffold0266 (126-467)||(1119-1462)
scaffold0266 (128-467)||(3508-3848)
[»] scaffold0023 (2 HSPs)
scaffold0023 (126-467)||(48593-48935)
scaffold0023 (126-359)||(36088-36323)
[»] scaffold0077 (2 HSPs)
scaffold0077 (126-468)||(36836-37181)
scaffold0077 (451-507)||(15327-15383)
[»] scaffold0195 (2 HSPs)
scaffold0195 (126-464)||(19201-19543)
scaffold0195 (126-393)||(21285-21553)
[»] scaffold0001 (2 HSPs)
scaffold0001 (142-467)||(171916-172242)
scaffold0001 (142-467)||(177619-177945)
[»] chr5 (41 HSPs)
chr5 (126-467)||(23506960-23507302)
chr5 (126-467)||(27182471-27182815)
chr5 (130-467)||(18530988-18531331)
chr5 (130-467)||(22053753-22054097)
chr5 (227-393)||(20623066-20623232)
chr5 (227-393)||(21233528-21233694)
chr5 (230-393)||(37052844-37053007)
chr5 (227-393)||(16536294-16536460)
chr5 (227-391)||(25900408-25900571)
chr5 (142-393)||(34939289-34939540)
chr5 (126-381)||(4199985-4200242)
chr5 (126-381)||(22366481-22366738)
chr5 (126-381)||(25426623-25426880)
chr5 (126-378)||(18777995-18778249)
chr5 (126-381)||(12369-12626)
chr5 (261-381)||(29188284-29188404)
chr5 (126-381)||(19499894-19500151)
chr5 (126-381)||(21073595-21073852)
chr5 (126-377)||(27009836-27010089)
chr5 (129-378)||(43443398-43443649)
chr5 (1-61)||(20623008-20623068)
chr5 (1-61)||(21233692-21233752)
chr5 (1-60)||(37052783-37052842)
chr5 (1-61)||(25900569-25900629)
chr5 (1-61)||(16536236-16536296)
chr5 (126-179)||(29190478-29190531)
chr5 (451-507)||(11584389-11584445)
chr5 (126-207)||(17471768-17471849)
chr5 (127-242)||(19862203-19862319)
chr5 (451-507)||(21222463-21222519)
chr5 (127-242)||(23493913-23494029)
chr5 (296-386)||(32950861-32950951)
chr5 (336-377)||(21310709-21310750)
chr5 (336-377)||(23981516-23981557)
chr5 (297-377)||(29918131-29918212)
chr5 (451-507)||(5450696-5450752)
chr5 (435-467)||(16105967-16105999)
chr5 (435-467)||(20623286-20623318)
chr5 (435-467)||(21233442-21233474)
chr5 (435-467)||(25900320-25900352)
chr5 (435-467)||(37053061-37053093)
[»] scaffold0175 (1 HSPs)
scaffold0175 (130-467)||(882-1219)
[»] scaffold0302 (1 HSPs)
scaffold0302 (126-467)||(12110-12450)
[»] chr6 (28 HSPs)
chr6 (126-467)||(23153442-23153786)
chr6 (126-466)||(14626045-14626386)
chr6 (126-393)||(35009439-35009707)
chr6 (142-393)||(1657748-1657999)
chr6 (142-393)||(15862484-15862734)
chr6 (126-468)||(1650020-1650361)
chr6 (126-381)||(25175558-25175815)
chr6 (126-381)||(27653983-27654240)
chr6 (398-467)||(23148266-23148335)
chr6 (435-507)||(19983152-19983224)
chr6 (435-507)||(35015017-35015089)
chr6 (126-381)||(16825752-16826011)
chr6 (310-393)||(27751605-27751688)
chr6 (195-393)||(29665937-29666137)
chr6 (435-507)||(18583640-18583712)
chr6 (451-507)||(21623506-21623562)
chr6 (153-241)||(18381821-18381909)
chr6 (451-507)||(22361620-22361676)
chr6 (130-234)||(27740837-27740941)
chr6 (336-377)||(16887792-16887833)
chr6 (297-377)||(18629608-18629689)
chr6 (126-218)||(22361926-22362019)
chr6 (336-377)||(33324898-33324939)
chr6 (336-377)||(35136013-35136054)
chr6 (435-467)||(18002395-18002427)
chr6 (435-467)||(23995247-23995279)
chr6 (127-242)||(25367374-25367490)
chr6 (435-467)||(26090059-26090091)
[»] scaffold0413 (1 HSPs)
scaffold0413 (130-467)||(5990-6327)
[»] scaffold0106 (1 HSPs)
scaffold0106 (126-467)||(41724-42066)
[»] scaffold0012 (1 HSPs)
scaffold0012 (126-467)||(247366-247710)
[»] scaffold0162 (3 HSPs)
scaffold0162 (126-467)||(26340-26683)
scaffold0162 (126-393)||(8180-8445)
scaffold0162 (451-507)||(6878-6934)
[»] scaffold0009 (1 HSPs)
scaffold0009 (137-467)||(272031-272362)
[»] scaffold0008 (2 HSPs)
scaffold0008 (126-467)||(128095-128436)
scaffold0008 (126-359)||(31697-31933)
[»] scaffold0498 (1 HSPs)
scaffold0498 (126-467)||(8873-9215)
[»] scaffold0011 (1 HSPs)
scaffold0011 (126-467)||(123087-123432)
[»] scaffold0218 (1 HSPs)
scaffold0218 (126-457)||(4996-5329)
[»] scaffold0141 (6 HSPs)
scaffold0141 (227-393)||(26892-27058)
scaffold0141 (227-386)||(22637-22796)
scaffold0141 (1-61)||(22579-22639)
scaffold0141 (1-61)||(26834-26894)
scaffold0141 (435-467)||(22857-22889)
scaffold0141 (435-467)||(27112-27144)
[»] scaffold0124 (3 HSPs)
scaffold0124 (227-393)||(1582-1748)
scaffold0124 (1-61)||(1746-1806)
scaffold0124 (435-467)||(1496-1528)
[»] scaffold0018 (1 HSPs)
scaffold0018 (261-465)||(51110-51314)
[»] scaffold0025 (3 HSPs)
scaffold0025 (130-467)||(8848-9192)
scaffold0025 (126-425)||(148716-149018)
scaffold0025 (367-467)||(146838-146938)
[»] scaffold0049 (2 HSPs)
scaffold0049 (126-386)||(48182-48443)
scaffold0049 (436-507)||(20493-20564)
[»] scaffold0028 (4 HSPs)
scaffold0028 (261-467)||(89378-89586)
scaffold0028 (342-467)||(107708-107835)
scaffold0028 (127-209)||(79533-79616)
scaffold0028 (336-377)||(79745-79786)
[»] scaffold0132 (2 HSPs)
scaffold0132 (126-393)||(13501-13769)
scaffold0132 (435-507)||(42677-42746)
[»] scaffold0026 (3 HSPs)
scaffold0026 (130-386)||(107746-108003)
scaffold0026 (126-377)||(64527-64785)
scaffold0026 (336-378)||(89863-89905)
[»] scaffold0125 (1 HSPs)
scaffold0125 (126-393)||(41643-41911)
[»] scaffold1542 (1 HSPs)
scaffold1542 (126-393)||(534-802)
[»] scaffold0075 (1 HSPs)
scaffold0075 (130-393)||(34460-34725)
[»] scaffold0772 (2 HSPs)
scaffold0772 (261-386)||(5660-5785)
scaffold0772 (435-467)||(5846-5878)
[»] scaffold0529 (1 HSPs)
scaffold0529 (126-382)||(2957-3215)
[»] scaffold0215 (2 HSPs)
scaffold0215 (126-359)||(9371-9605)
scaffold0215 (126-359)||(16269-16503)
[»] scaffold0076 (1 HSPs)
scaffold0076 (126-358)||(42992-43226)
[»] scaffold0369 (1 HSPs)
scaffold0369 (130-343)||(3721-3936)
[»] scaffold0116 (2 HSPs)
scaffold0116 (126-377)||(30-283)
scaffold0116 (435-500)||(30417-30482)
[»] scaffold0022 (2 HSPs)
scaffold0022 (130-343)||(5254-5467)
scaffold0022 (336-376)||(102923-102963)
[»] scaffold0420 (1 HSPs)
scaffold0420 (261-381)||(13325-13445)
[»] scaffold0139 (2 HSPs)
scaffold0139 (130-382)||(21115-21368)
scaffold0139 (130-359)||(14083-14313)
[»] scaffold0034 (1 HSPs)
scaffold0034 (435-507)||(80187-80259)
[»] scaffold0622 (1 HSPs)
scaffold0622 (126-229)||(9377-9480)
[»] scaffold0016 (3 HSPs)
scaffold0016 (434-507)||(162038-162111)
scaffold0016 (434-507)||(166124-166197)
scaffold0016 (451-507)||(116411-116467)
[»] scaffold1711 (1 HSPs)
scaffold1711 (261-381)||(1304-1424)
[»] scaffold0686 (2 HSPs)
scaffold0686 (435-507)||(5737-5809)
scaffold0686 (435-507)||(5943-6015)
[»] scaffold0184 (1 HSPs)
scaffold0184 (435-507)||(31140-31212)
[»] scaffold0066 (3 HSPs)
scaffold0066 (127-343)||(54412-54630)
scaffold0066 (195-343)||(45094-45244)
scaffold0066 (127-171)||(45007-45051)
[»] scaffold0342 (1 HSPs)
scaffold0342 (434-507)||(312-385)
[»] scaffold0104 (1 HSPs)
scaffold0104 (130-220)||(48513-48603)
[»] scaffold0361 (1 HSPs)
scaffold0361 (304-393)||(3364-3453)
[»] scaffold1164 (1 HSPs)
scaffold1164 (436-507)||(1701-1772)
[»] scaffold0122 (2 HSPs)
scaffold0122 (436-507)||(19810-19881)
scaffold0122 (436-507)||(24114-24185)
[»] scaffold0876 (1 HSPs)
scaffold0876 (436-506)||(94-164)
[»] scaffold0084 (1 HSPs)
scaffold0084 (268-386)||(56106-56226)
[»] scaffold0013 (1 HSPs)
scaffold0013 (451-507)||(35816-35872)
[»] scaffold0467 (1 HSPs)
scaffold0467 (268-467)||(10256-10458)
[»] scaffold0310 (1 HSPs)
scaffold0310 (436-507)||(6264-6335)
[»] scaffold1560 (1 HSPs)
scaffold1560 (130-220)||(26-116)
[»] scaffold0456 (2 HSPs)
scaffold0456 (336-377)||(1546-1587)
scaffold0456 (336-377)||(8691-8732)
[»] scaffold0123 (1 HSPs)
scaffold0123 (336-377)||(8216-8257)
[»] scaffold0058 (2 HSPs)
scaffold0058 (336-377)||(70307-70348)
scaffold0058 (435-467)||(57392-57424)
[»] scaffold1295 (1 HSPs)
scaffold1295 (451-507)||(442-498)
[»] scaffold0507 (1 HSPs)
scaffold0507 (451-507)||(1364-1420)
[»] scaffold0053 (1 HSPs)
scaffold0053 (451-507)||(76700-76756)
[»] scaffold0409 (2 HSPs)
scaffold0409 (339-377)||(1348-1386)
scaffold0409 (339-377)||(9603-9641)
[»] scaffold0151 (1 HSPs)
scaffold0151 (336-377)||(22422-22463)
[»] scaffold0032 (3 HSPs)
scaffold0032 (336-377)||(93773-93814)
scaffold0032 (435-467)||(55904-55936)
scaffold0032 (435-467)||(108075-108107)
[»] scaffold0004 (1 HSPs)
scaffold0004 (435-468)||(193396-193429)
[»] scaffold1272 (1 HSPs)
scaffold1272 (451-507)||(632-688)
[»] scaffold0970 (1 HSPs)
scaffold0970 (153-209)||(2476-2532)
[»] scaffold0706 (1 HSPs)
scaffold0706 (435-467)||(6443-6475)
[»] scaffold0597 (1 HSPs)
scaffold0597 (435-467)||(878-910)
[»] scaffold0483 (1 HSPs)
scaffold0483 (451-507)||(6999-7055)
[»] scaffold0465 (1 HSPs)
scaffold0465 (435-467)||(9882-9914)
[»] scaffold0389 (1 HSPs)
scaffold0389 (336-376)||(10868-10908)
[»] scaffold0251 (1 HSPs)
scaffold0251 (435-467)||(13285-13317)
[»] scaffold0080 (1 HSPs)
scaffold0080 (451-507)||(43652-43708)
[»] scaffold0010 (1 HSPs)
scaffold0010 (451-507)||(31357-31413)


Alignment Details
Target: chr3 (Bit Score: 332; Significance: 0; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 126 - 517
Target Start/End: Complemental strand, 16744382 - 16743991
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
16744382 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagct 16744283  T
226 caattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacac 325  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||| ||||||||||||||||||||||    
16744282 caattcaactataacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacac 16744183  T
326 ttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattcac 425  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||    
16744182 ttattatcaattcatggatacaaacatatcatcaaagttggagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttac 16744083  T
426 aaaatgatgatgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctttgcttctcc 517  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||    
16744082 aaaatgatgatgattatggtaaagactaacctcgttaccttaattatctccaactattagctctagcttcactttagctcctatgattctcc 16743991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 130 - 393
Target Start/End: Complemental strand, 17912745 - 17912483
Alignment:
130 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 229  Q
    ||||||||||| |||||| ||| ||||||||||| |||||||||||| | |||||| |||| || ||| |||||| |||| ||| |||||||||||||||    
17912745 tcatcatcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataacatcgattgaacatgaatcatagctcaat 17912646  T
230 tcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacacttat 329  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||| ||||| ||||||||||||||| ||||    
17912645 tcaactacaacatatcaaattcatcaattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttcaccaacaatcatacaattat 17912546  T
330 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
     |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
17912545 catcaattcatgcatacaaacatatcatc-aagttggagcacgaatttagcaacaattatccat 17912483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 142 - 467
Target Start/End: Original strand, 13838905 - 13839232
Alignment:
142 catgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 241  Q
    |||||| ||| |||||||| ||||||||||||||| | |||||| |||| || | | ||||||||||| |||||||||||| |||||| |||| |||||     
13838905 catgaatatgcatacccaaacaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatccaaccacaact 13839004  T
242 tgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcat 340  Q
    |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||||| |||| |||||||||| |||| ||||||||||    
13839005 tagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcat 13839104  T
341 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaa-ttcacaaaatgatgatgat 439  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||    
13839105 gcatacaaacatatcatcacagttggagcacgaatttagcaacaattattcataatcaaaattcatacaacatttgaaaatttcacaaaatgatgatgat 13839204  T
440 tatggtaaagactaacccccttacctta 467  Q
    |||| | |||||||||||||||||||||    
13839205 tatgatgaagactaacccccttacctta 13839232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 130 - 467
Target Start/End: Complemental strand, 14842825 - 14842487
Alignment:
130 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 229  Q
    |||||||||||||||||| ||| | |||||| |||| |||||||||  |||||||| |||| |||| | ||||||||||| |||||||||| | |||||     
14842825 tcatcatcaatccatgaatatgcaaacccaatcaattattcatcaatcataacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaa 14842726  T
230 tcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacactta 328  Q
    | ||| ||||| |  |||| |||| | |||  |||||||||||||||||| |||||| |||| |||| |||||| ||||| ||||||||||||||| |||    
14842725 ttaacaacaacttagcaaaattcaccaattgagcacaattttcataacttatcatttttacacatttgaacatgcaatttcaccaacaatcatacaatta 14842626  T
329 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattcacaaa 428  Q
    |  |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||  ||||    
14842625 tcttcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgcaaa 14842526  T
429 atgatgatgattatggtaaagactaacccccttacctta 467  Q
     ||| |||||||||| |||||||||||||||||||||||    
14842525 gtgaagatgattatgataaagactaacccccttacctta 14842487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 126 - 467
Target Start/End: Complemental strand, 12030415 - 12030073
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||||||||| |||||| ||| |||||||||||||||||||||||| |||||||| |||| || | | | ||||||||| |||||||||| |  |    
12030415 attctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccataacatcaattaacaaccatagcatcaattgaacaagaatcaaatat 12030316  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    ||| | ||| | ||| |  |||| |||| | |||  |||||| ||||| ||||| ||| || ||||||||| |||||| ||||| |||||||||| ||||    
12030315 caaattaacaataacttagcaaaattcaccaattgagcacaactttcacaacttatcacttttacatatttgaacatgtaatttcaccaacaatcttaca 12030216  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattca 424  Q
     |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||| ||||    
12030215 attatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaagtcatacaacatttgaaatttca 12030116  T
425 caaaatgatgatgattatggtaaagactaacccccttacctta 467  Q
    ||||||||||||||||||| ||| || ||||||||||||||||    
12030115 caaaatgatgatgattatgataatgattaacccccttacctta 12030073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 130 - 467
Target Start/End: Original strand, 2049809 - 2050147
Alignment:
130 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 229  Q
    ||||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || | | | ||||||||| |||| ||||| | |||||     
2049809 tcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccatagcatcaattgaacaaaaatcaaatctcaaa 2049908  T
230 tcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacactta 328  Q
    | ||| ||||| |  |||| |||| | |||  |||||||||||| || || |||| | ||||||||| |||||| ||||| |||||||||| |||| |||    
2049909 ttaacaacaacttagcaaaattcaccaattgagcacaattttcacaagttatcatgtttacatatttgaacatgtaatttcaccaacaatcttacaatta 2050008  T
329 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattcacaaa 428  Q
    | ||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||| ||||||||    
2050009 tcatcaattcaggcatacaaacatatcgtcacagttggagcacgaatttagcaacaattatccataagcaaaattgatacaacatttgaaatttcacaaa 2050108  T
429 atgatgatgattatggtaaagactaacccccttacctta 467  Q
    ||||||||||||||| |||||||||||||||||||||||    
2050109 atgatgatgattatgataaagactaacccccttacctta 2050147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 126 - 419
Target Start/End: Complemental strand, 15859292 - 15858996
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || | | ||||||||||| |||||||||||| ||    
15859292 attctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataact 15859193  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    ||||||||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | ||||||| |||||| ||||| |||||||||||||||    
15859192 caattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcatatttgaacatgtaatttcaccaacaatcataca 15859093  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaa 419  Q
     |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||   ||||||||||||||| ||||||    
15859092 attatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacaattgaaa 15858996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 227 - 393
Target Start/End: Complemental strand, 2449404 - 2449238
Alignment:
227 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 326  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||| ||||||| ||||||||||||||||||||| |    
2449404 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 2449305  T
327 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
2449304 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 2449238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 131 - 403
Target Start/End: Complemental strand, 51158281 - 51158008
Alignment:
131 catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 230  Q
    |||| ||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || | | ||||||||||| |||||||||||| ||||||     
51158281 catcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatc 51158182  T
231 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacacttat 329  Q
     ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||||| ||||||||||||||| ||||    
51158181 taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattat 51158082  T
330 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaatt 403  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||    
51158081 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaatt 51158008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 331 - 507
Target Start/End: Original strand, 19231982 - 19232161
Alignment:
331 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatt-cacaa 427  Q
    ||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||| |||||| ||   ||||||||||||||||||||||||| |||||    
19231982 atcaattcatgaatataaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttcacaa 19232081  T
428 aatgatgatgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
19232082 aatgatgatgattaagataaagactaacccccttaccttaattatctccaactattagctctaacttcacttttgctcct 19232161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 126 - 386
Target Start/End: Complemental strand, 15936895 - 15936634
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||||||||||||||| ||| |||| || ||||| |||||||||  | |||||| |||| |||| | ||||||||||| |||||||||| | ||    
15936895 attctcatcatcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatct 15936796  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    ||| | ||| ||||| | ||||| |||| | |||  |||||||||||| ||||| |||||| |||| |||| |||||| ||||| |||||||||||||||    
15936795 caaattaacaacaacttatcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcataca 15936696  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 386  Q
     |||| ||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||    
15936695 attatcatcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaat 15936634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 134 - 386
Target Start/End: Complemental strand, 15938729 - 15938476
Alignment:
134 catcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaa 233  Q
    |||||||||||||| ||| |||| || ||||| |||||||||  | |||||| |||| |||| | ||||||||||| |||||||||| | ||||| | ||    
15938729 catcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaattaa 15938630  T
234 ctacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacacttattat 332  Q
    | ||||| | ||||| |||| | |||  |||||||||||| ||||| |||||| |||| |||| |||||| ||||| ||||||||||||||| |||| ||    
15938629 caacaacttatcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcat 15938530  T
333 caattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 386  Q
    |||||||||  |||||||||||||| | |||||||||||| |||||| ||||||    
15938529 caattcatgattacaaacatatcattacagttggagcacgtatttagtaacaat 15938476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 347 - 467
Target Start/End: Complemental strand, 19260869 - 19260749
Alignment:
347 aaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggta 446  Q
    ||||||||||||| | || ||||||||||||||||||||| ||||||||  ||||||||||||||||||||||| | |||||||||||||||||||| ||    
19260869 aaacatatcatcataattagagcacgaatttagcaacaattatccataaaaaaaattcatacaacatttgaaaacttacaaaatgatgatgattatgata 19260770  T
447 aagactaacccccttacctta 467  Q
    |||||||||||||||||||||    
19260769 aagactaacccccttacctta 19260749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 261 - 393
Target Start/End: Complemental strand, 13975853 - 13975722
Alignment:
261 gcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 360  Q
    ||||||| |||||||||| |||||| ||| |||||||||||| ||||  ||||||||||||||| | || | |||||||||||||| |||||||||||||    
13975853 gcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaa 13975755  T
361 agttggagcacgaatttagcaacaatcatccat 393  Q
    |||||||||||||||||||||||||| ||||||    
13975754 agttggagcacgaatttagcaacaattatccat 13975722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 261 - 393
Target Start/End: Original strand, 45860937 - 45861068
Alignment:
261 gcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 360  Q
    ||||||| |||||||||| |||||| ||| |||||||||||| ||||  ||||||||||||||| | || | |||||||||||||| |||||||||||||    
45860937 gcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaa 45861035  T
361 agttggagcacgaatttagcaacaatcatccat 393  Q
    |||||||||||||||||||||||||| ||||||    
45861036 agttggagcacgaatttagcaacaattatccat 45861068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 246 - 393
Target Start/End: Complemental strand, 13955036 - 13954890
Alignment:
246 aaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcata 345  Q
    ||||||||| |||  ||||||| |||||||||  |||||| ||| |||||||||||| ||||  ||||||||||||||| | || | |||||||||||||    
13955036 aaattcatcaattgagcacaatattcataactgatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcata 13954937  T
346 caaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
    | ||||||||||||||||||||||||||||||||||||||| ||||||    
13954936 c-aacatatcatcaaagttggagcacgaatttagcaacaattatccat 13954890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 126 - 468
Target Start/End: Original strand, 15614829 - 15615170
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||| |||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||| || | | |||||||||||  ||||||||| | |     
15614829 attctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaatcc 15614928  T
226 caattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    ||| | ||| | ||| | |  ||||||| | |||  |||| || |||| ||||| |||||| ||||||||| |||||| ||||| |||||||||| ||||    
15614929 caaattaacaataacttagcaaaattcaccaattgagcaccatattcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcctaca 15615028  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaattc 423  Q
     |||| ||||||||||||||||||| ||| || || |||  |||||| ||| |||||  |||  | ||| || | |  ||||||||||||  ||||||      
15615029 attatcatcaattcatgcatacaaatataacaccacagtaagagcacaaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaat-- 15615126  T
424 acaaaatgatgatgattatggtaaagactaacccccttaccttaa 468  Q
     |||||| |  ||||||||| ||||||||||||||||||||||||    
15615127 gcaaaatta-catgattatgataaagactaacccccttaccttaa 15615170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 130 - 359
Target Start/End: Original strand, 16821138 - 16821369
Alignment:
130 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 229  Q
    ||||||| |||||||||| ||| | ||||||||||| |||||||||  |||| ||| | || |||  | ||||||||||| ||| |||||| | |||||     
16821138 tcatcattaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaa 16821237  T
230 tcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacactt 327  Q
    ||||| ||||| |  |  ||||||| | |||| |||||||  ||||| |||  ||||| ||||||||| |||||| ||||| ||||||||||||||| ||    
16821238 tcaacaacaacttaggagaaattcaccaatttagcacaatactcatagcttaacatttttacatatttgaacatgtaatttcaccaacaatcatacaatt 16821337  T
328 attatcaattcatgcatacaaacatatcatca 359  Q
    || ||||||| ||||||||||||||| |||||    
16821338 atcatcaatttatgcatacaaacataacatca 16821369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 432 - 507
Target Start/End: Complemental strand, 15857198 - 15857123
Alignment:
432 atgatgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    |||||||||||| | |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
15857198 atgatgattatgatgaagactaacccccttaccttaattatctccaagtattagctctagcttcactttagctcct 15857123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 126 - 381
Target Start/End: Original strand, 55316214 - 55316471
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||||||||||||||| ||| | ||||||||||| |||||| ||  |||  ||| | || |||  | ||||||| ||| ||||| |||| | ||    
55316214 attctcatcatcaatccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattcataacatcatttgaacaagcatcacatct 55316313  T
226 caattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatac 323  Q
    ||| | ||| ||||| |  |  ||||||| | |||  ||||||| |||||||||| |||||| | ||||| | |||||| ||||| ||||||||||||||    
55316314 caacttaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatac 55316413  T
324 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 381  Q
    |  ||  ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
55316414 aactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 55316471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 435 - 507
Target Start/End: Original strand, 3992873 - 3992945
Alignment:
435 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
3992873 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 3992945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 435 - 507
Target Start/End: Original strand, 55513193 - 55513265
Alignment:
435 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
55513193 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 55513265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 126 - 381
Target Start/End: Original strand, 41270070 - 41270327
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||||||||||||||| ||| | ||||||||||| |||||| ||  |||  ||| | || |||  | ||||||| ||| ||||| |||| | ||    
41270070 attctcatcatcaatccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattcataacatcatttgaacaagcatcacatct 41270169  T
226 caattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatac 323  Q
    ||| | ||| ||||| |  |  ||||||| | |||  ||||||| |||||||||| |||||| | ||||| | |||||| ||||  ||||||||||||||    
41270170 caacttaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaattccaccaacaatcatac 41270269  T
324 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 381  Q
    |  ||  ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
41270270 aactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 41270327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 435 - 507
Target Start/End: Original strand, 2844514 - 2844586
Alignment:
435 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||| |||| |||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||    
2844514 atgattatgataaaaactaacccccttaccttaattatctcaaactattagctctagcttcacttttgctcct 2844586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 435 - 507
Target Start/End: Complemental strand, 54038056 - 54037984
Alignment:
435 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||| |||| |||||||||||||||||||||||| ||||||| |||||| ||||||||||| ||||||    
54038056 atgattatgataaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcct 54037984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 435 - 490
Target Start/End: Complemental strand, 17955916 - 17955861
Alignment:
435 atgattatggtaaagactaacccccttaccttaattatctccaactactagctcta 490  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
17955916 atgattatgataaagactaacccccttaccttaattatctccaactattagctcta 17955861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 126 - 240
Target Start/End: Original strand, 47984645 - 47984759
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||||||||| |||||| ||| |||||||||  ||||||||||||| | |||||| |||| || ||| ||||||||||| ||| |||||| | ||    
47984645 attctcatcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaaaaacatcaattgaacatgaatcacatct 47984744  T
226 caattcaactacaac 240  Q
    |||| |||| |||||    
47984745 caatccaacaacaac 47984759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 126 - 240
Target Start/End: Original strand, 48003219 - 48003333
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||||||||| |||||| ||| |||||||||  ||||||||||||| | |||||| |||| || ||| ||||||||||| ||| |||||| | ||    
48003219 attctcatcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaaaaacatcaattgaacatgaatcacatct 48003318  T
226 caattcaactacaac 240  Q
    |||| |||| |||||    
48003319 caatccaacaacaac 48003333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 2449462 - 2449402
Alignment:
1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactccatcataat 61  Q
    |||||||  ||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
2449462 atgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataat 2449402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 435 - 507
Target Start/End: Original strand, 7854305 - 7854377
Alignment:
435 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||| | || |||||||||||||||||||||||| ||||||| |||||| ||||||||||| ||||||    
7854305 atgattatgatgaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcct 7854377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 16744507 - 16744447
Alignment:
1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactccatcataat 61  Q
    |||||||  |||||| | |||||||||||||||||||||||||||||||||||||||||||    
16744507 atgagatcaacatcaactatcaaccacaatcataacatataatcatacactccatcataat 16744447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 435 - 496
Target Start/End: Original strand, 45581954 - 45582016
Alignment:
435 atgattatggtaaagactaacccc-cttaccttaattatctccaactactagctctagcttca 496  Q
    ||||||||| |||| ||||||||| ||||||||||||||||||||||| ||||||||||||||    
45581954 atgattatgataaaaactaaccccccttaccttaattatctccaactattagctctagcttca 45582016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 126 - 240
Target Start/End: Original strand, 47993932 - 47994046
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||||||||| |||||| ||| |||||||||  ||||||||||||| | || ||| |||| || ||| ||||||||||| ||| |||||| | ||    
47993932 attctcatcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaaaatcaattaacaacaaaaacatcaattgaacatgaatcacatct 47994031  T
226 caattcaactacaac 240  Q
    |||| |||| |||||    
47994032 caatccaacaacaac 47994046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 126 - 240
Target Start/End: Original strand, 48012505 - 48012619
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||||||||| |||||| ||| |||||||||  ||||||||||||| | || ||| |||| || ||| ||||||||||| ||| |||||| | ||    
48012505 attctcatcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaaaatcaattaacaacaaaaacatcaattgaacatgaatcacatct 48012604  T
226 caattcaactacaac 240  Q
    |||| |||| |||||    
48012605 caatccaacaacaac 48012619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 336 - 377
Target Start/End: Original strand, 14080715 - 14080756
Alignment:
336 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 377  Q
    |||||||||||||||||||||||| |||||||||||||||||    
14080715 ttcatgcatacaaacatatcatcatagttggagcacgaattt 14080756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 15468601 - 15468520
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaat 207  Q
    ||||||||||||||| |||||| ||| ||||||||||||||||||||  || ||||||||  ||| ||  ||||||||||||    
15468601 attctcatcatcaattcatgaatatgcatacccaagcaatgattcattcacaataacatcagttaacaataacaacatcaat 15468520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 451 - 507
Target Start/End: Original strand, 17205019 - 17205075
Alignment:
451 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||||||||||||||||| |||| | ||||| | ||||||||||||||||||    
17205019 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctcct 17205075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 297 - 467
Target Start/End: Original strand, 54651625 - 54651796
Alignment:
297 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat-aa 395  Q
    |||||| ||||| ||  ||||||||||| |||| ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||||||| || ||| ||    
54651625 aacatgcaatttcactcacaatcatacaattatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattattcatcaa 54651724  T
396 tcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctta 467  Q
     | |  ||||||||||||  |||| | || ||| |||  ||||||||| | ||||| |||||||||||||||    
54651725 cccattttcatacaacatgagaaattgcaaaaattgaacatgattatgatgaagacaaacccccttacctta 54651796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 453 - 507
Target Start/End: Original strand, 12031849 - 12031903
Alignment:
453 aacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||||||||||||||| |||| | ||||| | ||||||||||||||||||    
12031849 aacccccttaccttaattatcaccaattcctagcccaagcttcactttagctcct 12031903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 466
Target Start/End: Complemental strand, 12265053 - 12264710
Alignment:
127 ttctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctc 226  Q
    |||||||||||||||||| |  |||||||||||||  || ||||| | || | ||||||  |||  | ||||||||||||| | ||| |||||| | |||    
12265053 ttctcatcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctc 12264954  T
227 aattcaactacaacatgtcaaa--ttcatccattttgcacaattttcataacttctcatttctacata--tttaaacatggaatttaaccaacaatcata 322  Q
    | |||||| ||||||| |||||  |||||| |||  | | || | |||||||||  ||||| ||||||  || ||||||| ||||| ||| |||| ||||    
12264953 atttcaacaacaacatatcaaaatttcatcaattaagtataa-tctcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacata 12264855  T
323 cacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaat 421  Q
    |  | || ||||||||||||| |  || ||| ||||| ||   |||||||||||||||||||||  | ||| || | |  ||||||||||||  ||||||    
12264854 ccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaat 12264755  T
422 tcacaaaatgatgatgattatggtaaagactaacccccttacctt 466  Q
     || ||| ||   ||||||||| |||  |||||||||||||||||    
12264754 gcaaaaattgtacatgattatgataataactaacccccttacctt 12264710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 22275204 - 22275285
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaat 207  Q
    ||||||||||||||| |||||| ||| ||||| ||||||||||||||  || ||||||||  ||| ||  ||||||||||||    
22275204 attctcatcatcaattcatgaatatgcatacctaagcaatgattcattcacaataacatcagttaacaataacaacatcaat 22275285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 435 - 467
Target Start/End: Complemental strand, 13954836 - 13954804
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    |||||||||||||||||||||||||||||||||    
13954836 atgattatggtaaagactaacccccttacctta 13954804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 451 - 507
Target Start/End: Original strand, 17191879 - 17191935
Alignment:
451 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||||||||||||||||| |||| | ||||| | | ||||||||||||||||    
17191879 ctaacccccttaccttaattatcaccaattcctagcccaaacttcactttagctcct 17191935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 451 - 507
Target Start/End: Complemental strand, 38810925 - 38810869
Alignment:
451 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||||||||||| ||||| |||| | ||||| | ||||||||||||||||||    
38810925 ctaacccccttaccttagttatcaccaattcctagcccaagcttcactttagctcct 38810869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 435 - 467
Target Start/End: Original strand, 45861122 - 45861154
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    |||||||||||||||||||||||||||||||||    
45861122 atgattatggtaaagactaacccccttacctta 45861154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 296 - 386
Target Start/End: Complemental strand, 11986263 - 11986173
Alignment:
296 aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 386  Q
    ||||||| ||||| | | ||||||||||| |||| || || ||||||| || || ||| ||||| |||| ||||||||||||| |||||||    
11986263 aaacatgtaatttcaaccacaatcatacaattatcattaaatcatgcacacgaaaataacatcacagttagagcacgaatttaacaacaat 11986173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Complemental strand, 2449184 - 2449152
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
2449184 atgattatgataaagactaacccccttacctta 2449152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 451 - 507
Target Start/End: Complemental strand, 3576347 - 3576291
Alignment:
451 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||||||||||||||||| | || | ||||| | |||||||||||| |||||    
3576347 ctaacccccttaccttaattatcacaaattcctagcccaagcttcactttacctcct 3576291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 242
Target Start/End: Complemental strand, 11329214 - 11329098
Alignment:
127 ttctcatcatcaatccatgaa-catgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||| |||  |||||| |||| |||||||||| |||| | |||| | | ||||||  |||||| |||||||||||||||  || ||||| || |     
11329214 ttctcatcaacaaatcatgaatcatgcatacccaagccatgaattatcatcaacaacatcacttagcaacaacaacatcaattgatcatgaatcttatca 11329115  T
226 caattcaactacaacat 242  Q
    ||||||||| |||||||    
11329114 caattcaacaacaacat 11329098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 451 - 507
Target Start/End: Complemental strand, 13301380 - 13301324
Alignment:
451 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||||||||||||||| | | || | ||||| | ||||||||||||||||||    
13301380 ctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctcct 13301324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 451 - 507
Target Start/End: Complemental strand, 13312036 - 13311980
Alignment:
451 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||||||||||||||| | | || | ||||| | ||||||||||||||||||    
13312036 ctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctcct 13311980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Original strand, 16261777 - 16261809
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
16261777 atgattatgataaagactaacccccttacctta 16261809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Complemental strand, 16933901 - 16933869
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
16933901 atgattatgataaagactaacccccttacctta 16933869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Complemental strand, 17912430 - 17912398
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
17912430 atgattatgataaagactaacccccttacctta 17912398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Original strand, 23492696 - 23492728
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
23492696 atgattatgataaagactaacccccttacctta 23492728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Original strand, 38168237 - 38168269
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
38168237 atgattatgataaagactaacccccttacctta 38168269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Original strand, 53771365 - 53771397
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
53771365 atgattatgataaagactaacccccttacctta 53771397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 236; Significance: 1e-130; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 126 - 393
Target Start/End: Complemental strand, 22907481 - 22907214
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
22907481 attctcatcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 22907382  T
226 caattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacac 325  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||| |||||||||||||||||||||     
22907381 caattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaa 22907282  T
326 ttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
22907281 ttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 22907214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 130 - 507
Target Start/End: Complemental strand, 16405236 - 16404860
Alignment:
130 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 229  Q
    ||||||||||| ||||||  || ||||||||||| |||||||||||||| |||||| |||| || ||| ||||||||||| ||||||||||||  |||||    
16405236 tcatcatcaattcatgaatttgcatacccaagcagtgattcatcaactaaaacatcaattaacaacaataacatcaattgaacaagaatcatatgtcaat 16405137  T
230 tcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacactta 328  Q
    | |||   ||| |  |||| |||| | |||  |||||||||||| |||||  ||||| | | ||||| |||||| ||||| ||||||||||||||| |||    
16405136 ttaac---aacttagcaaaattcaccaattgagcacaattttcacaacttaacatttgttcctatttgaacatgtaatttcaccaacaatcatacaatta 16405040  T
329 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaattcaca 426  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||| ||   ||||||||||||||||||||||||| ||     
16405039 tcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaataattatccatcatgcaaaaattcatacaacatttgaaaatttac- 16404941  T
427 aaatgatgatgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    |||| |||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
16404940 aaataatgatgattatgatgaagactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 16404860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 131 - 467
Target Start/End: Complemental strand, 16193979 - 16193643
Alignment:
131 catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 230  Q
    |||| ||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || | | ||||||||||| |||||||||| | ||||| |    
16193979 catcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcaaatctcaaat 16193880  T
231 caactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacacttat 329  Q
     ||| ||||  || |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| |||||  |||||||||||||| ||||    
16193879 taacaacaatttggcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttccccaacaatcatacaattat 16193780  T
330 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattcacaaaa 429  Q
     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| || |||    
16193779 catcaattcatgcatacaaacatatcatcatagttggagcacgaatttagcaacaatcatccataagcaaaattcatacaatatttgaaaatttaccaaa 16193680  T
430 tgatgatgattatggtaaagactaacccccttacctta 467  Q
    |||||||||||||| |||||||||| ||||||||||||    
16193679 tgatgatgattatgataaagactaa-ccccttacctta 16193643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 126 - 467
Target Start/End: Complemental strand, 43373736 - 43373392
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||||||||| |||||| ||| ||||||||||||| |||||||||| | |||||| |||| || | | | ||||||||| |||||||||| | ||    
43373736 attctcatcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaaccatagcatcaattgaacaagaatcaaatct 43373637  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    ||| | ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||||| ||||||||||||| |    
43373636 caaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatata 43373537  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 422  Q
     |||| |||||||||||||||||||| |||||||| |||||||||||||||||||||  ||| |||||| ||   |||||||||||||||||||||| ||    
43373536 attatcatcaattcatgcatacaaacgtatcatcacagttggagcacgaatttagcattaattatccattatacaaaaattcatacaacatttgaaattt 43373437  T
423 cacaaaatgatgatgattatggtaaagactaacccccttacctta 467  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
43373436 cacaaaatgatgatgattatgataaagactaacccccttacctta 43373392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 142 - 467
Target Start/End: Complemental strand, 24929043 - 24928716
Alignment:
142 catgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 241  Q
    |||||| ||| |||||||||||||||||||||||  | |||||| |||| || | | ||| ||||||| ||||||  |||| |||||| |||| |||||     
24929043 catgaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacaaccataacctcaattgaacaagagacataactcaatccaaccacaact 24928944  T
242 tgtc-aaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcat 340  Q
    |  | ||||||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||||| ||||||||||||||| |||| ||||||||||    
24928943 tagcgaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcat 24928844  T
341 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaa-ttcacaaaatgatgatgat 439  Q
    |||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
24928843 gcatacaaacatataatcacagttggagcacgaatttagcaacaattatccataatcaaaattcatacaacatttgaaaatttcacaaaatgacgatgat 24928744  T
440 tatggtaaagactaacccccttacctta 467  Q
    |||| |||||||||||||| ||||||||    
24928743 tatgataaagactaaccccattacctta 24928716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 227 - 393
Target Start/End: Original strand, 5238184 - 5238350
Alignment:
227 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 326  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||| ||||||||||||||||||||| |    
5238184 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 5238283  T
327 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
5238284 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 5238350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 227 - 393
Target Start/End: Complemental strand, 24661414 - 24661248
Alignment:
227 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 326  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||| ||||||||||||||||||||| |    
24661414 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 24661315  T
327 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
24661314 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 24661248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 227 - 393
Target Start/End: Original strand, 43685643 - 43685809
Alignment:
227 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 326  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||| ||||||||||||||||||||| |    
43685643 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 43685742  T
327 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
43685743 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 43685809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 126 - 381
Target Start/End: Complemental strand, 6774514 - 6774258
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||| |||||| |||||| ||| ||||||||||| |||||||||||| | |||||| | || || ||| |||||||||||  ||||||||| | ||    
6774514 attctcataatcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatct 6774415  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    ||| | ||| | ||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||||| |||||||||||||||    
6774414 caaattaacaataacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcataca 6774315  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 381  Q
     |||| ||||||||||||||||||||||| ||||| |||  |||||||||| |||||    
6774314 attatcatcaattcatgcatacaaacataacatcacagtaagagcacgaatctagca 6774258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 142 - 393
Target Start/End: Original strand, 17345581 - 17345832
Alignment:
142 catgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 241  Q
    |||||| ||| ||||||||||| |||||||||||| | |||||| |||| || ||| || ||||| || |||||||||||| ||||||||| | | |||     
17345581 catgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataatatcaactgaacaagaatcataactcaattca-caataact 17345679  T
242 tgtcaaattc-atccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcat 340  Q
    |  |||| || ||| |||  ||||||||||||||||||| ||||| |||||| || ||||||  |||| ||||||||||||||| |||| ||||||||||    
17345680 tagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcat 17345779  T
341 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
    ||||| ||||||| ||||| |||| |||||||||||| |||||||| ||||||    
17345780 gcatataaacataacatcacagttagagcacgaatttcgcaacaattatccat 17345832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 126 - 381
Target Start/End: Original strand, 24548977 - 24549233
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||| |||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||| || | | |||||||||||  ||||||||| | |     
24548977 attctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaatcc 24549076  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    ||| | ||| | ||| |  |||| |||| | |||  |||| ||||||| ||||| |||||| ||||||||| |||||| ||||| |||||||||||||||    
24549077 caaattaacaataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcataca 24549176  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 381  Q
     |||| ||||||||||||||||||||||| ||||| |||  |||||||||| |||||    
24549177 attatcatcaattcatgcatacaaacataacatcacagtaagagcacgaatctagca 24549233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 126 - 377
Target Start/End: Complemental strand, 21844829 - 21844576
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||| ||||| ||||| ||| | ||||||||||| |||||||||  |||| ||| | || |||  | ||||||| ||| |||| ||||| | ||    
21844829 attctcatcaacaatcaatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaaaaatcacatct 21844730  T
226 caattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatac 323  Q
    ||| | ||| ||||| |  |  ||||||| | |||  ||||||| |||||||||| |||||| |||||||||||||||| ||||| ||||||||||||||    
21844729 caaattaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatac 21844630  T
324 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 377  Q
    | | || ||||||||||||||||||||||| ||||| ||   ||||||||||||    
21844629 aatcatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 21844576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 126 - 377
Target Start/End: Complemental strand, 21852222 - 21851969
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||| ||||| ||||| ||| | ||||||||||| |||||||||  |||| ||| | || |||  | ||||||| ||| |||||||||| | ||    
21852222 attctcatcaacaatcaatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacatct 21852123  T
226 caattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatac 323  Q
    ||| | ||| ||||| |  |  ||||||| | |||  ||||||| |||||||||| |||||| |||||||||||||||  ||||| ||||||||||||||    
21852122 caaattaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacatatttaaacatttaatttcaccaacaatcatac 21852023  T
324 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 377  Q
    | | || ||||||||||||||||||||||| ||||| ||   ||||||||||||    
21852022 aatcatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 21851969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 130 - 381
Target Start/End: Original strand, 30120721 - 30120974
Alignment:
130 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 229  Q
    |||||||||||| ||||| ||| | ||||||||||| |||||||||  |||| ||| | || |||  | ||||||||||| ||| |||||| | |||||     
30120721 tcatcatcaatcgatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaa 30120820  T
230 tcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacactt 327  Q
    | ||| ||||| |  |  ||||||| | |||  ||||||| |||||||||| |||||| | ||||| | |||||| ||||| |||||||||||||||  |    
30120821 ttaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaact 30120920  T
328 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 381  Q
    |  || |||||||||||||||||||| ||||| ||   ||||||||||||||||    
30120921 aacataaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 30120974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 435 - 507
Target Start/End: Original strand, 274766 - 274838
Alignment:
435 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
274766 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 274838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 435 - 507
Target Start/End: Complemental strand, 641083 - 641011
Alignment:
435 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
641083 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 641011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 435 - 507
Target Start/End: Complemental strand, 826889 - 826817
Alignment:
435 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
826889 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 826817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 435 - 507
Target Start/End: Complemental strand, 24716794 - 24716722
Alignment:
435 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||    
24716794 atgattatgataaagactaacccccttaccttaattatcaccaactattagctctagcttcacttttgctcct 24716722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 5238126 - 5238186
Alignment:
1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactccatcataat 61  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
5238126 atgagatcaacatcatcaatcaaccacaatcataacatataatcatacactccatcataat 5238186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 24661472 - 24661412
Alignment:
1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactccatcataat 61  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
24661472 atgagatcaacatcatcaatcaaccacaatcataacatataatcatacactccatcataat 24661412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 126 - 318
Target Start/End: Complemental strand, 222948 - 222754
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||||||||||||||| ||| ||||||||||||| |||||||||  |||| ||| | || |||  | ||||||| ||| |||||||||| | ||    
222948 attctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaact 222849  T
226 caattcaactacaac--atgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaat 318  Q
    ||| | ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||||| |||||||||    
222848 caaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 222754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 126 - 318
Target Start/End: Complemental strand, 736571 - 736377
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||||||||||||||| ||| ||||||||||||| |||||||||  |||| ||| | || |||  | ||||||| ||| |||||||||| | ||    
736571 attctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaact 736472  T
226 caattcaactacaac--atgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaat 318  Q
    ||| | ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||||| |||||||||    
736471 caaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 736377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 126 - 318
Target Start/End: Complemental strand, 860466 - 860272
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||||||||||||||| ||| ||||||||||||| |||||||||  |||| ||| | || |||  | ||||||| ||| |||||||||| | ||    
860466 attctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaact 860367  T
226 caattcaactacaac--atgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaat 318  Q
    ||| | ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||||| |||||||||    
860366 caaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 860272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 22907606 - 22907546
Alignment:
1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactccatcataat 61  Q
    |||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||    
22907606 atgagatcaacatcaacaatcaaccacaatcataacatataatcatacactccatcataat 22907546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 43685585 - 43685645
Alignment:
1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactccatcataat 61  Q
    |||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||    
43685585 atgagatcaacatcaacaatcaaccacaatcataacatataatcatacactccatcataat 43685645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 126 - 381
Target Start/End: Complemental strand, 16674649 - 16674392
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||||||||||||||| ||| | || |||||||| |||||| ||  |||  ||| | || |||  | ||||||| ||| ||||| |||| | ||    
16674649 attctcatcatcaatccatgaatatgcaaactcaagcaattattcattaatcatattatcaaataacattcataacatcatttgaacaagcatcacatct 16674550  T
226 caattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatac 323  Q
    ||| | ||| ||||| |  |  ||||||| | |||  ||||||| |||||||||| |||||| | ||||| | |||||| ||||| ||||||||||||||    
16674549 caacttaacaacaacttaggagaaattcaccaattaagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatac 16674450  T
324 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 381  Q
    |  ||  || |||||||||||| ||||||| ||||| ||   ||||||||||||||||    
16674449 aactaacataaattcatgcataaaaacataacatcacagaaagagcacgaatttagca 16674392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 435 - 507
Target Start/End: Original strand, 39115598 - 39115670
Alignment:
435 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||| | || |||||| ||||||||||||||||  ||||||| |||||| ||||||||||| ||||||    
39115598 atgattatgatgaaaactaacacccttaccttaattattaccaactattagctcaagcttcacttttgctcct 39115670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 153 - 242
Target Start/End: Original strand, 23837219 - 23837308
Alignment:
153 atacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 242  Q
    |||||||||| |||| |||||||| | ||||||  |||||| ||||||||||||||| ||| || || || | ||||||||| |||||||    
23837219 atacccaagccatgaatcatcaacaacaacatcacttagcaacaacaacatcaattgaacatgactcttaccacaattcaacaacaacat 23837308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 451 - 507
Target Start/End: Original strand, 17285543 - 17285599
Alignment:
451 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||||||||||||||||| |||| | ||| | | ||||||||||||||||||    
17285543 ctaacccccttaccttaattatcaccaattcctaacccaagcttcactttagctcct 17285599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 451 - 507
Target Start/End: Complemental strand, 21198062 - 21198006
Alignment:
451 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    |||||||||||| |||||||||| |||| | ||||| | ||||||||||||||||||    
21198062 ctaacccccttatcttaattatcaccaattcctagcccaagcttcactttagctcct 21198006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 22321654 - 22321608
Alignment:
11 catcatcaatcaaccacaatcataacatataatcatacactccatca 57  Q
    ||||| |||||||||||||||| ||||||||||||| || |||||||    
22321654 catcaacaatcaaccacaatcacaacatataatcatgcattccatca 22321608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 377
Target Start/End: Original strand, 23149985 - 23150026
Alignment:
336 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 377  Q
    ||||||||| |||||||||||||| | |||||||||||||||    
23149985 ttcatgcattcaaacatatcatcataattggagcacgaattt 23150026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 377
Target Start/End: Complemental strand, 23226117 - 23226076
Alignment:
336 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 377  Q
    |||||||||||||||||||||||| |||| |||||| |||||    
23226117 ttcatgcatacaaacatatcatcatagttagagcacaaattt 23226076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Original strand, 5238404 - 5238436
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
5238404 atgattatgataaagactaacccccttacctta 5238436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Complemental strand, 22907160 - 22907128
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
22907160 atgattatgataaagactaacccccttacctta 22907128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Complemental strand, 24385684 - 24385652
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
24385684 atgattatgataaagactaacccccttacctta 24385652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Complemental strand, 24661194 - 24661162
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
24661194 atgattatgataaagactaacccccttacctta 24661162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Original strand, 43685863 - 43685895
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
43685863 atgattatgataaagactaacccccttacctta 43685895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 236; Significance: 1e-130; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 126 - 393
Target Start/End: Original strand, 26680196 - 26680463
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
26680196 attctcatcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 26680295  T
226 caattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacac 325  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||     
26680296 caattcaactacaacatgtcaaattcatctattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaa 26680395  T
326 ttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
26680396 ttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 26680463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 126 - 505
Target Start/End: Complemental strand, 54118512 - 54118130
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || | | ||||||||||| |||||||||||| ||    
54118512 attctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaactataacatcaattgaacaagaatcataact 54118413  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
     |||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| ||| || | | ||||| |||||| ||||| |||||||||||||||    
54118412 aaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcaattgttcctatttgaacatgtaatttcaccaacaatcataca 54118313  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatt 422  Q
     |||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||    
54118312 attatcatcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatt 54118213  T
423 cacaaaatgatgatgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctc 505  Q
    |||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
54118212 cacaaaataatgatgattatgatgaagactaacccccttaccttaattatctccaactattagctctagcttcacttttgctc 54118130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 126 - 467
Target Start/End: Original strand, 13246425 - 13246769
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||| ||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || | | ||||||||||| |||||||||||| ||    
13246425 attctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataact 13246524  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    ||||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||||| |||||||||||||||    
13246525 caatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcataca 13246624  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 422  Q
     |||| || |||||||||||||||||||||||||| ||||| |||||||||||| ||||||| |||||| ||   |||||||||||||||||||||||||    
13246625 attatcattaattcatgcatacaaacatatcatcacagttgtagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatt 13246724  T
423 cacaaaatgatgatgattatggtaaagactaacccccttacctta 467  Q
     |||||||||||||||||||| |||||||||||||||||||||||    
13246725 tacaaaatgatgatgattatgataaagactaacccccttacctta 13246769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 130 - 467
Target Start/End: Complemental strand, 15675353 - 15675009
Alignment:
130 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 229  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||| | |||||| |||| || ||| ||||||||||| ||| |||||||| ||||||    
15675353 tcatcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaat 15675254  T
230 tcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacactta 328  Q
    ||||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||| ||||| ||||||||||||||| |||    
15675253 tcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaatta 15675154  T
329 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaattcaca 426  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||  ||   ||||||||||| ||||||||||| |  ||    
15675153 tcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgca 15675054  T
427 aa----atgatgatgattatggtaaagactaacccccttacctta 467  Q
    ||    ||||||||||||||| | |||||||||||||||||||||    
15675053 aaaatgatgatgatgattatgatgaagactaacccccttacctta 15675009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 261 - 467
Target Start/End: Original strand, 122020 - 122226
Alignment:
261 gcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 360  Q
    |||||||||||| ||||| |||||| ||||||||| |||||| ||||| |||||||||| |||| |||| |||||||||||||||||||||||||||||     
122020 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 122119  T
361 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaaccccct 460  Q
    ||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||    
122120 agttggagcacaaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaatcccct 122219  T
461 tacctta 467  Q
    |||||||    
122220 tacctta 122226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 227 - 393
Target Start/End: Original strand, 10488659 - 10488825
Alignment:
227 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 326  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||| ||||||| ||||||||||||||||||||| |    
10488659 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 10488758  T
327 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
10488759 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 10488825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 227 - 393
Target Start/End: Complemental strand, 16328092 - 16327926
Alignment:
227 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 326  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||| ||||||| ||||||||||||||||||||| |    
16328092 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 16327993  T
327 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
16327992 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 16327926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 195 - 467
Target Start/End: Complemental strand, 10104449 - 10104170
Alignment:
195 caacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatat 293  Q
    ||||||||||||||| ||| |||||||| ||||||||||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| ||||||     
10104449 caacaacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataa 10104350  T
294 ttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca- 392  Q
    || |||||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||     
10104349 ttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacggatttagcaacaattatccaa 10104250  T
393 -taatcaaaattcatacaacatttgaaaattcacaaa----atgatgatgattatggtaaagactaacccccttacctta 467  Q
     ||   ||||||||||| ||||||||||| |   |||    ||||||||||||||| | |||||||||||||||||||||    
10104249 ttatgaaaaattcataccacatttgaaaaattgtaaaaatgatgatgatgattatgatgaagactaacccccttacctta 10104170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 130 - 366
Target Start/End: Original strand, 31115628 - 31115865
Alignment:
130 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 229  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||| | |||||| |||| || ||| ||||||||||| ||| |||||||| ||||||    
31115628 tcatcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaat 31115727  T
230 tcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacactta 328  Q
    ||||| ||||| | |  ||||||| | |||  ||| |||||||| |||||| ||||| |||||| |  |||||| ||||| ||||||||||||||| |||    
31115728 tcaacaacaacttaggaaaattcaccaattgagcataattttcacaacttcacatttttacataatggaacatgtaatttcaccaacaatcatacaatta 31115827  T
329 ttatcaattcatgcatacaaacatatcatcaaagttgg 366  Q
    | ||||||||||||||||||||||||||||| ||||||    
31115828 tcatcaattcatgcatacaaacatatcatcacagttgg 31115865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 246 - 393
Target Start/End: Complemental strand, 13048368 - 13048221
Alignment:
246 aaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcata 345  Q
    ||||||||| |||  ||||||| |||||||||| || ||| |||||||||||||||| ||||| ||||||||||||||| | || ||||| |||||||||    
13048368 aaattcatcaattgagcacaatattcataacttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaaatcatgcata 13048269  T
346 caaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
    ||||||||||||  ||||||||||| ||||||||||||||| ||||||    
13048268 caaacatatcattgaagttggagcatgaatttagcaacaattatccat 13048221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 126 - 377
Target Start/End: Original strand, 10644214 - 10644467
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||||||||||||||| ||| | ||||||||||| |||||||||  |||| ||| | || |||  | ||||||||||| ||| |||||| | ||    
10644214 attctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatct 10644313  T
226 caattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatac 323  Q
    ||| ||||| ||||| |  |  ||||||| | |||| |||||||  |||||||||  ||||| ||||||||| |||||| ||||| || |||||||||||    
10644314 caaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcactaacaatcatac 10644413  T
324 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 377  Q
    | |||| ||||||||||||||||||||||| ||||| ||   ||||||||||||    
10644414 aattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 10644467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 331 - 467
Target Start/End: Original strand, 33240901 - 33241043
Alignment:
331 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaattcacaaa 428  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||  ||   ||||||||||| ||||||||||| |  ||||    
33240901 atcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaa 33241000  T
429 ----atgatgatgattatggtaaagactaacccccttacctta 467  Q
        ||||||||||||||| | |||||||||||||||||||||    
33241001 aatgatgatgatgattatgatgaagactaacccccttacctta 33241043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 126 - 381
Target Start/End: Original strand, 47357649 - 47357906
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||||||||||||||| ||  |||||||| |||| |||||||||  |||| ||| | || |||  | ||||||| ||| |||||||||| | ||    
47357649 attctcatcatcaatccatgaatatacatacccaatcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaact 47357748  T
226 caattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatac 323  Q
    ||| | ||| ||||| |  |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||||| ||||||||| ||||    
47357749 caaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatac 47357848  T
324 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 381  Q
    |  ||  |||||| |||||||||||||||| ||||| ||   ||||||||||||||||    
47357849 aactaacatcaatccatgcatacaaacataacatcacagcaagagcacgaatttagca 47357906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 435 - 507
Target Start/End: Complemental strand, 25119139 - 25119067
Alignment:
435 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||| |||| |||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||    
25119139 atgattatgataaaaactaactcccttaccttaattatctccaactattagctctagcttcacttttgctcct 25119067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 26680071 - 26680131
Alignment:
1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactccatcataat 61  Q
    |||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||    
26680071 atgagatcaacatcaacaatcaaccacaatcataacatataatcatacactccatcataat 26680131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 195 - 377
Target Start/End: Complemental strand, 40885753 - 40885570
Alignment:
195 caacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacata- 292  Q
    ||||||||||||||| ||| |||||||| ||||||||||| | ||| |  |||| |||| | |||  ||| ||||| ||||||||  ||||| ||||||     
40885753 caacaacatcaattgaacatgaatcatatctcaattcaacaataacttagcaaagttcaccaattgagcataattt-cataacttgacatttatacatac 40885655  T
293 tttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 377  Q
    ||| |||||| ||||| |||||||| ||| || |||| | ||||||||||||||||||||| || || |||||||| ||||||||    
40885654 tttgaacatgtaatttcaccaacaaacattcaattatcaccaattcatgcatacaaacatagcaccacagttggagtacgaattt 40885570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 130 - 229
Target Start/End: Original strand, 111394 - 111493
Alignment:
130 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 229  Q
    ||||| ||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || | | ||||||||||| |||||||||||| ||||||    
111394 tcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcataactcaat 111493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 10488601 - 10488661
Alignment:
1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactccatcataat 61  Q
    |||||||  ||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
10488601 atgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataat 10488661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 435 - 507
Target Start/End: Complemental strand, 5682460 - 5682388
Alignment:
435 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||| |||| |||||||| ||||||||||||||| ||||||| ||||||  |||||||||| ||||||    
5682460 atgattatgataaaaactaacccacttaccttaattatcaccaactattagctcatgcttcacttttgctcct 5682388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 361 - 467
Target Start/End: Original strand, 31132545 - 31132657
Alignment:
361 agttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaattcacaaa----atgatgatgattatggtaaagactaa 454  Q
    |||||||||||||||||||||||||| |||||  ||   ||||||||||| ||||||||||| |  ||||    |||||||| |||||| | ||||||||    
31132545 agttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaaaatgatgatgataattatgatgaagactaa 31132644  T
455 cccccttacctta 467  Q
    |||||||||||||    
31132645 cccccttacctta 31132657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 10104495 - 10104449
Alignment:
130 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcaac 176  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||    
10104495 tcatcatcaattcatgaatatgtatacccaagcaatgattcatcaac 10104449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 16328135 - 16328090
Alignment:
16 tcaatcaaccacaatcataacatataatcatacactccatcataat 61  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||    
16328135 tcaatcaactacaatcataacatataatcataccctccatcataat 16328090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 153 - 242
Target Start/End: Complemental strand, 41166172 - 41166083
Alignment:
153 atacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 242  Q
    |||||||||| ||||||||||||| | ||||||  |||||| ||||||||||||||| ||| || || |  | ||||||||| |||||||    
41166172 atacccaagccatgattcatcaacaacaacatcacttagcaacaacaacatcaattgaacatgactcttgccacaattcaacaacaacat 41166083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 451 - 507
Target Start/End: Complemental strand, 41165865 - 41165809
Alignment:
451 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||||||| ||||||||| |||| | ||||| | ||||||||||||||||||    
41165865 ctaacccccttacgttaattatcaccaattcctagcccaagcttcactttagctcct 41165809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 451 - 507
Target Start/End: Complemental strand, 47534990 - 47534934
Alignment:
451 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||||||||||||||||| |||| | || || | ||||||||||||||||||    
47534990 ctaacccccttaccttaattatcaccaattcctcgcccaagcttcactttagctcct 47534934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 242
Target Start/End: Complemental strand, 7186068 - 7185981
Alignment:
155 acccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 242  Q
    |||||||| |||| |||||||| |||| |||| |||||| ||||||||||||||  ||| |||||  | | ||||||||| |||||||    
7186068 acccaagccatgaatcatcaacaataatatctcttagcaacaacaacatcaattaaacatgaatctcatcacaattcaacaacaacat 7185981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 242
Target Start/End: Original strand, 15044851 - 15044938
Alignment:
155 acccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 242  Q
    |||||||| |||| |||||| | | ||||||  |||||| ||||||||||||||| ||| ||||| || | ||||||||| |||||||    
15044851 acccaagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacat 15044938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 467
Target Start/End: Original strand, 7850131 - 7850346
Alignment:
261 gcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 360  Q
    ||||||||||||||||||| |||||  ||||| ||  ||||  ||||  ||||||||||| ||| || | |||||| ||| ||| |||||||| ||||      
7850131 gcacaattttcataacttcacattttcacataattggacatacaattccaccaacaatcacacagttttcatcaatacattcattcaaacataacatctc 7850230  T
361 agttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaattcaca----aaatgatga---tgattatggtaaagac 451  Q
      |||||||||||||||| || |||| || ||| ||   |||||||||| ||  ||||||  |||| |    | |||||||   |||||||||| |||||    
7850231 cattggagcacgaatttaacagcaattatgcattatacaaaaattcatataatctttgaattttcaaatgaaagatgatgaacatgattatggtgaagac 7850330  T
452 taacccccttacctta 467  Q
    ||||||||||||||||    
7850331 taacccccttacctta 7850346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 336 - 376
Target Start/End: Complemental strand, 13809551 - 13809511
Alignment:
336 ttcatgcatacaaacatatcatcaaagttggagcacgaatt 376  Q
    ||||||||| |||||||||||||| | ||||||||||||||    
13809551 ttcatgcattcaaacatatcatcataattggagcacgaatt 13809511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Original strand, 14952085 - 14952117
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
14952085 atgattatgataaagactaacccccttacctta 14952117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Complemental strand, 15135939 - 15135907
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
15135939 atgattatgataaagactaacccccttacctta 15135907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Complemental strand, 15272243 - 15272211
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
15272243 atgattatgataaagactaacccccttacctta 15272211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Complemental strand, 16327872 - 16327840
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
16327872 atgattatgataaagactaacccccttacctta 16327840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Complemental strand, 16609045 - 16609013
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
16609045 atgattatgataaagactaacccccttacctta 16609013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Original strand, 26680517 - 26680549
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
26680517 atgattatgataaagactaacccccttacctta 26680549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 228; Significance: 1e-125; HSPs: 4)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 126 - 393
Target Start/End: Complemental strand, 37333 - 37066
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
37333 attctcatcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 37234  T
226 caattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacac 325  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||| ||||||| |||||||||||||||||||||     
37233 caatccaactacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaa 37134  T
326 ttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
37133 ttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 37066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 435 - 507
Target Start/End: Original strand, 41632 - 41704
Alignment:
435 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    |||||| || |||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
41632 atgattgtgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 41704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 37442 - 37398
Alignment:
17 caatcaaccacaatcataacatataatcatacactccatcataat 61  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
37442 caatcaaccacaatcacaacatataatcatacactccatcataat 37398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Complemental strand, 37012 - 36980
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
37012 atgattatgataaagactaacccccttacctta 36980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 228; Significance: 1e-125; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 126 - 393
Target Start/End: Original strand, 7293012 - 7293279
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
7293012 attctcatcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagct 7293111  T
226 caattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacac 325  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||| |||||||||||||||||||||     
7293112 caattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaa 7293211  T
326 ttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
7293212 ttattattaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 7293279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 130 - 507
Target Start/End: Original strand, 3059965 - 3060343
Alignment:
130 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 229  Q
    ||||| ||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| ||   | ||||||||||| |||||||||||| ||||||    
3059965 tcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagtcataacatcaattgaacaagaatcataactcaat 3060064  T
230 tcaactacaacatgtcaaa-ttcatccatttt-gcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacactt 327  Q
      ||| ||||| |  |||| |||| ||||||  ||| |||||||| || || |||||| ||||||||| |||||| ||||| ||||||| |  |||| ||    
3060065 ctaacaacaacttaacaaaattca-ccatttgagcataattttcacaatttatcatttttacatatttgaacatgtaatttcaccaacagtattacaatt 3060163  T
328 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattcacaa 427  Q
    || ||||||| ||||||||||| |||| |||| |||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||    
3060164 atcatcaattaatgcatacaaatatattatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatataacatttgaaaatttacaa 3060263  T
428 aatgatgatgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    |||||||||||||||| |||||||| ||||||||||||| |||||||||||||| |||||||||||||||||| ||||||    
3060264 aatgatgatgattatgataaagacttacccccttaccttcattatctccaactattagctctagcttcacttttgctcct 3060343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 126 - 467
Target Start/End: Original strand, 16211761 - 16212103
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||| |||| ||| |||||| ||| ||||||||||||||| |||||||| | |||||| |||| || | | ||||||||||  |||||||||| | ||    
16211761 attctcttcattaattcatgaatatgcatacccaagcaatgaatcatcaaccacaacatcaattaacaaccataacatcaatttaacaagaatcaaatct 16211860  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    ||| | ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||||| || ||||||| ||||    
16211861 caaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgcaatttcacaaacaatcttaca 16211960  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattca 424  Q
     |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||| ||||    
16211961 attatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattgtccataagcaaaattcatacaacatttgaaatttca 16212060  T
425 caaaatgatgatgattatggtaaagactaacccccttacctta 467  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
16212061 caaaatgatgatgattatgataaagactaacccccttacctta 16212103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 126 - 467
Target Start/End: Complemental strand, 13037282 - 13036938
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||| ||||| |||||| ||| |||||||||||||||||||||||| | |||||| ||||  ||  | ||||| ||||| |||||||||||| ||    
13037282 attctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatattcataacattaattgaacaagaatcataact 13037183  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    ||||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||||| | |||||||||||||    
13037182 caatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgcaatttcatcaacaatcataca 13037083  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 422  Q
     |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||    
13037082 attatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatt 13036983  T
423 cacaaaatgatgatgattatggtaaagactaacccccttacctta 467  Q
     |||||||||||||||||||||| |||||||||||||||||||||    
13036982 tacaaaatgatgatgattatggtgaagactaacccccttacctta 13036938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 126 - 467
Target Start/End: Complemental strand, 11581007 - 11580661
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||| || ||||| |||||| |||||||||||||||||||||||||||| | |||||| |||| || | | ||||||||||| |||||||||||| ||    
11581007 attctcgtcctcaattcatgaatatgtatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataact 11580908  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    ||||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||||| |||||||||||||||    
11580907 caatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcataca 11580808  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat---caaaattcatacaacatttgaaaat 421  Q
     |||| |||||||||||||||||||||||| |||| |||||||||||||||||||||| ||| |||||| ||    ||||||||||||||||||||||||    
11580807 attatcatcaattcatgcatacaaacatattatcacagttggagcacgaatttagcaataattatccattatgcaaaaaattcatacaacatttgaaaat 11580708  T
422 tcac-aaaatgatgatgattatggtaaagactaacccccttacctta 467  Q
    | || |||||||||||||||||| |||||||||| ||||||||||||    
11580707 ttacaaaaatgatgatgattatgataaagactaatccccttacctta 11580661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 126 - 467
Target Start/End: Original strand, 36052662 - 36053003
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||||||||| |||||| ||| ||||||||||||| |||||||||| | |||||| |||| || | ||||||||||||| |||||||||| | ||    
36052662 attctcatcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaaccacaacatcaattgaacaagaatcaaatct 36052761  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    ||| | |||   ||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||||| ||||||||||||| |    
36052762 caaattaac---aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaattttaccaacaatcatata 36052858  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 422  Q
     |||| |||||||||||||||||||| |||||||| |||||||| |  |||||||||||||| |||||| ||   |||||||||||||||||||||| ||    
36052859 attatcatcaattcatgcatacaaacgtatcatcacagttggagtataaatttagcaacaattatccattatacaaaaattcatacaacatttgaaattt 36052958  T
423 cacaaaatgatgatgattatggtaaagactaacccccttacctta 467  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
36052959 cacaaaatgatgatgattatgataaagactaacccccttacctta 36053003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 227 - 393
Target Start/End: Original strand, 11516324 - 11516490
Alignment:
227 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 326  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||| ||||||||||||||||||||| |    
11516324 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 11516423  T
327 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
11516424 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 11516490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 227 - 393
Target Start/End: Complemental strand, 15441730 - 15441564
Alignment:
227 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 326  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||| ||||||||||||||||||||| |    
15441730 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 15441631  T
327 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
15441630 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 15441564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 227 - 393
Target Start/End: Complemental strand, 30262295 - 30262129
Alignment:
227 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 326  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||| ||||||||||||||||||||| |    
30262295 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 30262196  T
327 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
30262195 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 30262129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 130 - 393
Target Start/End: Complemental strand, 47481295 - 47481031
Alignment:
130 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 229  Q
    ||||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| ||||  | | | ||||||||||| |||||||||||| ||||||    
47481295 tcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaaaaacatcaattaagagcgataacatcaattgaacaagaatcataactcaat 47481196  T
230 tcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacactta 328  Q
    ||||| ||||| |  |||| |||| | |||   ||||||||||| ||||| |||||| ||||||||| |||||| ||||| || |||||||||||| |||    
47481195 tcaacaacaacttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaatta 47481096  T
329 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
    | ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||| ||||||    
47481095 tcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattatccat 47481031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 126 - 386
Target Start/End: Complemental strand, 18254103 - 18253842
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||||||||||||||| ||| |||| || ||||| |||||||||  | |||||| |||| |||| | ||||||||||| |||||||||| | ||    
18254103 attctcatcatcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatct 18254004  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    ||| | ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| |||| |||| |||||| ||||| |||||||||||||||    
18254003 caaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcataca 18253904  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 386  Q
     |||| ||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||    
18253903 attatcatcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaat 18253842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 126 - 392
Target Start/End: Original strand, 13321009 - 13321278
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||||||||| ||||||  || | |||||||  ||||||||||||| | |||||| |||| || ||| ||||||||||| ||| |||||||| ||    
13321009 attctcatcatcaattcatgaatgtgcaaacccaagtcatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatct 13321108  T
226 caattcaacta-caacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatattt--aaacatggaatttaaccaacaatcat 321  Q
    ||||||||| | |||| |  |||| |||| | |||  ||||||||| ||||||||  ||||| |||||| ||  ||||||| ||||| ||||||||||||    
13321109 caattcaacaatcaacttagcaaaattcaccaattgagcacaattt-cataacttgacatttatacatactttgaaacatgtaatttcaccaacaatcat 13321207  T
322 acacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca 392  Q
    ||| |||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||| |||||    
13321208 acaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattatcca 13321278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 130 - 375
Target Start/End: Complemental strand, 16479214 - 16478968
Alignment:
130 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 229  Q
    |||||||||||||||||| ||| ||||||||||| |||||||||||| | |||||| | || || ||| |||||||||||  ||||||||| | |||||     
16479214 tcatcatcaatccatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatctcaaa 16479115  T
230 tcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacactta 328  Q
    | ||  | ||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||||| ||||||||||||||| |||    
16479114 ttaaaaataacttaacaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaatta 16479015  T
329 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaat 375  Q
    | ||||||||||||||||||||||| ||||  |||  ||||||||||    
16479014 tcatcaattcatgcatacaaacataacatcgcagtaagagcacgaat 16478968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 261 - 393
Target Start/End: Complemental strand, 25292470 - 25292338
Alignment:
261 gcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 360  Q
    ||||||| |||||| ||| || ||| |||||||||||||||| ||||| ||||||||||||||| | || | |||||||| |||||||||||||||||||    
25292470 gcacaatattcatagcttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatacatacaaacatatcatcaa 25292371  T
361 agttggagcacgaatttagcaacaatcatccat 393  Q
    ||||||||||| |||||||||||||| ||||||    
25292370 agttggagcacaaatttagcaacaattatccat 25292338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 126 - 377
Target Start/End: Original strand, 13572671 - 13572924
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||| ||||||||||| ||| | ||||||||||| |||||| ||  |||| ||| | || |||  | ||||||| ||| ||||| |||| | ||    
13572671 attctcatcaacaatccatgaatatgcaaacccaagcaattattcattaatcataatatcaaataacattcataacatcatttgaacaagcatcacatct 13572770  T
226 caattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatac 323  Q
    ||| | ||| ||||| |  |  ||||||| | |||  ||||||| |||||||||| |||||| |||||||||||||||| ||||| ||||||||||| ||    
13572771 caaattaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcacac 13572870  T
324 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 377  Q
    | | || ||||||||||||||||||||||| ||||| ||   ||||||||||||    
13572871 aatcatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 13572924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 126 - 381
Target Start/End: Complemental strand, 13911282 - 13911024
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||||||||||||||| ||| | ||||||| ||| |||||||||  |||| ||| | || |||  | ||||||||||| ||| |||||| | ||    
13911282 attctcatcatcaatccatgaatatgcaaacccaagaaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatct 13911183  T
226 caattcaactacaacat---gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcata 322  Q
    ||| ||||| ||||| |   |  ||||||| | |||  ||| ||| |||||||||| |||||| | ||||| | |||||| ||||| |||||||||||||    
13911182 caaatcaacaacaactttaggagaaattcaccaattgagcataatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcata 13911083  T
323 cacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 381  Q
    || |||  ||||||||||||||||||||||| ||||| |    ||||||||||||||||    
13911082 caattaacatcaattcatgcatacaaacataacatcacaacaagagcacgaatttagca 13911024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 126 - 381
Target Start/End: Original strand, 10989405 - 10989661
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||||||||||||||| ||| | ||||||||||| |||||||||  |||| ||| | || |||  | ||||||| ||| |||||||||| | ||    
10989405 attctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaact 10989504  T
226 caattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatac 323  Q
    ||| | | | ||||| |  |  ||||||| | |||  ||||||| |||||||||| |||||| | ||||| | |||||| ||||| ||||||||||||||    
10989505 caaatta-caacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatac 10989603  T
324 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 381  Q
    |  ||  ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
10989604 aactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 10989661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 265 - 465
Target Start/End: Complemental strand, 296094 - 295893
Alignment:
265 aattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagtt 364  Q
    |||||| |||||||||||||| |||||| || |||||| ||||| |||||||||||||   |||| ||| ||||||||| ||||||||| || |  | ||    
296094 aatttttataacttctcatttttacataattcaacatgaaatttcaccaacaatcataacattatcatcgattcatgcacacaaacataacacctcaatt 295995  T
365 ggagcacgaatttagcaacaatcatccataat-caaaa-ttcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaaccccctta 462  Q
     || |||||||||||||||||| || ||| || ||||| |||||||||  ||||||||| || ||||||||||  |||||| | ||||| ||||||||||    
295994 agaacacgaatttagcaacaattattcattatgcaaaatttcatacaaagtttgaaaatgca-aaaatgatgagaattatgttgaagacaaaccccctta 295896  T
463 cct 465  Q
    |||    
295895 cct 295893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 435 - 507
Target Start/End: Complemental strand, 32493978 - 32493906
Alignment:
435 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
32493978 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 32493906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 15441788 - 15441728
Alignment:
1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactccatcataat 61  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
15441788 atgagatcaacatcatcaatcaaccacaatcataacatataatcatacactccatcataat 15441728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 30262353 - 30262293
Alignment:
1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactccatcataat 61  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
30262353 atgagatcaacatcatcaatcaaccacaatcataacatataatcatacactccatcataat 30262293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 130 - 382
Target Start/End: Original strand, 2437456 - 2437710
Alignment:
130 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 229  Q
    |||||||||||||||||| ||| | || |||||||| |||||||||  |||| ||| | || |||  | ||||||| ||| |||||||||| | ||||      
2437456 tcatcatcaatccatgaatatgcaaactcaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcaaatctcata 2437555  T
230 tcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacactt 327  Q
    | ||| ||||| |  |  ||||||| | |||   |||||| |||||||||| |||||| | ||||| | |||||| ||||| |||||||||||||||  |    
2437556 ttaacaacaacttaggaaaaattcaccaattgaacacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaact 2437655  T
328 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaa 382  Q
    |  ||||||||||||||||||||||| ||||| |    |||||||||||||||||    
2437656 aacatcaattcatgcatacaaacataacatcacaacaagagcacgaatttagcaa 2437710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 435 - 507
Target Start/End: Original strand, 126738 - 126810
Alignment:
435 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||| |||||||| ||||| ||| ||||||    
126738 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctaacttcatttttgctcct 126810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 435 - 500
Target Start/End: Complemental strand, 1936949 - 1936884
Alignment:
435 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 500  Q
    ||||||||| |||| ||||||| |||||||||||||||||||||||| || |||||||||||||||    
1936949 atgattatgataaaaactaacctccttaccttaattatctccaactattaactctagcttcacttt 1936884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7292887 - 7292947
Alignment:
1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactccatcataat 61  Q
    |||||||  |||||| |||||||||||||||| ||||||||||||||||||||||||||||    
7292887 atgagatcaacatcaacaatcaaccacaatcacaacatataatcatacactccatcataat 7292947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11516266 - 11516326
Alignment:
1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactccatcataat 61  Q
    |||||||  |||||| ||||||||||||||||||||||||| |||||||||||||||||||    
11516266 atgagatcaacatcaacaatcaaccacaatcataacatatactcatacactccatcataat 11516326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 435 - 507
Target Start/End: Complemental strand, 111201 - 111129
Alignment:
435 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||| | || |||||||||||||||||||||||| ||||||  |||||| ||||||||||| ||||||    
111201 atgattatgatgaaaactaacccccttaccttaattatcaccaacttttagctcaagcttcacttttgctcct 111129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 351 - 393
Target Start/End: Complemental strand, 14114031 - 14113989
Alignment:
351 atatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
14114031 atatcatcaaagttggagcacgaatttagcaacaattatccat 14113989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 351 - 393
Target Start/End: Complemental strand, 14423681 - 14423639
Alignment:
351 atatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
14423681 atatcatcaaagttggagcacgaatttagcaacaattatccat 14423639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 451 - 507
Target Start/End: Original strand, 13377867 - 13377923
Alignment:
451 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||||||||||||||||| |||| | ||||| | ||||||||||||||||||    
13377867 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctcct 13377923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 451 - 507
Target Start/End: Original strand, 13389693 - 13389749
Alignment:
451 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||||||||||||||||| |||| | ||||| | ||||||||||||||||||    
13389693 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctcct 13389749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 436 - 507
Target Start/End: Complemental strand, 7283987 - 7283916
Alignment:
436 tgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    |||||||| | || |||||||||||||||||||||||| |||| || || ||| ||||||||||| ||||||    
7283987 tgattatgatgaaaactaacccccttaccttaattatcaccaattattaactcaagcttcacttttgctcct 7283916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 452 - 507
Target Start/End: Original strand, 16919870 - 16919925
Alignment:
452 taacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||||| |||||||||| |||| | ||||| | ||||||||||||||||||    
16919870 taacccccttatcttaattatcaccaattcctagcccaagcttcactttagctcct 16919925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 377
Target Start/End: Complemental strand, 16915009 - 16914928
Alignment:
297 aacatggaatttaaccaacaatcatacacttattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 377  Q
    |||||| ||||| ||||||||  || || |||| ||||||| ||||||| |||||||||||||| | || ||||||||||||    
16915009 aacatgcaatttcaccaacaacaattcaattatcatcaatttcatgcattcaaacatatcatcataattagagcacgaattt 16914928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Original strand, 2029244 - 2029276
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
2029244 atgattatgataaagactaacccccttacctta 2029276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Original strand, 7293333 - 7293365
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
7293333 atgattatgataaagactaacccccttacctta 7293365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Original strand, 11516544 - 11516576
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
11516544 atgattatgataaagactaacccccttacctta 11516576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Complemental strand, 14113935 - 14113903
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
14113935 atgattatgataaagactaacccccttacctta 14113903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Complemental strand, 15441510 - 15441478
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
15441510 atgattatgataaagactaacccccttacctta 15441478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Complemental strand, 30262075 - 30262043
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
30262075 atgattatgataaagactaacccccttacctta 30262043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Complemental strand, 42056220 - 42056188
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
42056220 atgattatgataaagactaacccccttacctta 42056188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 209; Significance: 1e-114; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 130 - 517
Target Start/End: Original strand, 41394221 - 41394609
Alignment:
130 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 229  Q
    |||||||||||||||||| ||| |||||||| || |||||||||||| | |||||| | || || ||| |||||||||||  ||||||||| | |||||     
41394221 tcatcatcaatccatgaatatgcatacccaatcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatctcaac 41394320  T
230 tcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacactta 328  Q
      ||| | ||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| || || ||||||||||||||| |||    
41394321 ataacaataacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaacttcaccaacaatcatacaatta 41394420  T
329 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattcacaaa 428  Q
    | ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
41394421 tcatcaatttatgcatacaaacatatcatcatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaa 41394520  T
429 atgatgatgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctttgcttctcc 517  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||    
41394521 atgatgatgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgattctcc 41394609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 126 - 467
Target Start/End: Original strand, 20445674 - 20446019
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||| ||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||| || | | |||||||||||  ||||||||||| |     
20445674 attctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacagccataacatcaattgatcaagaatcataaca 20445773  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    ||||||||| ||||| |  |||| |||| | |||  ||||||||||||  |||| |||||| | | || || |||||| ||||| |||||||||||||||    
20445774 caattcaacaacaacttagcaaaattcaccaattgagcacaattttcaccacttatcatttgttcctacttgaacatgtaatttcaccaacaatcataca 20445873  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaa-t 421  Q
     |||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||   ||||||||||||||||||||||| |    
20445874 attatcatcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatt 20445973  T
422 tcacaaaatgatgatgattatggtaaagactaacccccttacctta 467  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||    
20445974 tcacaaaatgatgatgattatgataaagactaactcccttacctta 20446019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 126 - 467
Target Start/End: Original strand, 20931340 - 20931682
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||||| ||| |||||| ||| ||||||||| ||| |||||||||| | |||||| |||| || | | ||||||||||| |||||||||| | ||    
20931340 attctcatcattaattcatgaatatgcatacccaagaaattattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcaaatct 20931439  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    ||| | ||| ||||  |  |||| |||| | |||| |||||||||||||||||| |||||| ||||||| | |||||| ||||| |||||||||| ||||    
20931440 caaattaacaacaatttagcaaaattcaccaatttagcacaattttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttaca 20931539  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattca 424  Q
     |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||| ||||||||||| |||||||||      
20931540 attatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaacttcatacaacaattgaaaatttg 20931639  T
425 caaaatgatgatgattatggtaaagactaacccccttacctta 467  Q
    |||||||| |||||||||| ||||| |||||||||||||||||    
20931640 caaaatgaggatgattatgataaaggctaacccccttacctta 20931682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 126 - 467
Target Start/End: Complemental strand, 37844719 - 37844374
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||| ||||| |||||| ||| ||||||||||||||| |||||||| | |||||| |||| || | | ||||||||||| |||||||||||| ||    
37844719 attctcatcctcaattcatgaatatgcatacccaagcaatgactcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcataact 37844620  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttca-taacttctcatttctacatatttaaacatggaatttaaccaacaatcatac 323  Q
    ||||  ||| ||||| |  |||| |||||  |||  |||||||||||| ||  || |||||| | | || || |||||| ||||| ||||||||||||||    
37844619 caatctaacaacaacttagcaaaattcattaattgagcacaattttcactattttatcatttgttcctacttgaacatgtaatttcaccaacaatcatac 37844520  T
324 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaat 421  Q
    | |||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||| ||   ||||||||||||||||||||||||    
37844519 aattatcatcaattcatgcatacaaacatatcatcatagttggagcatgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaat 37844420  T
422 tcacaaaatgatgatgattatggtaaagactaacccccttacctta 467  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
37844419 tcacaaaatgatgatgattatgataaagactaacccccttacctta 37844374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 126 - 467
Target Start/End: Original strand, 20531439 - 20531783
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||| ||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||| || | | |||||||||||  ||||||||||| |     
20531439 attctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacagccataacatcaattgatcaagaatcataaca 20531538  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    ||||||||| ||||| |  |||| |||| | |||  ||||||||||||  |||| |||||| | | || || |||||| ||||| |||||||||||||||    
20531539 caattcaacaacaacttagcaaaattcaccaattgagcacaattttcaccacttatcatttgttcctacttgaacatgtaatttcaccaacaatcataca 20531638  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 422  Q
     |||| |||||||||||||||||||||||| |||| | |||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||    
20531639 attatcatcaattcatgcatacaaacatattatcacatttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatt 20531738  T
423 cacaaaatgatgatgattatggtaaagactaacccccttacctta 467  Q
    ||||||||||||||||||||| ||||||||||   ||||||||||    
20531739 cacaaaatgatgatgattatgataaagactaatttccttacctta 20531783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 126 - 467
Target Start/End: Original strand, 20913032 - 20913367
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||||||||| |||||| ||| ||||||||||||| |||||||||| | || ||| |||| || | | ||||||||||| ||||||||||         
20913032 attctcatcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaagatcaattaacaaccataacatcaattgaacaagaatca----- 20913126  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
     |||| ||| ||||| |  |||| |||| | |||  |||||||||||||||||| |||||| ||||||| | |||||| ||||| |||||||||| ||||    
20913127 -aatt-aacaacaactttgcaaaattcaccaattgagcacaattttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttaca 20913224  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattca 424  Q
     |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||||||      
20913225 attatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccgtaagcaaaattcatacaacaattgaaaatttg 20913324  T
425 caaaatgatgatgattatggtaaagactaacccccttacctta 467  Q
    |||||||| |||||||| | |||||||||||||||||||||||    
20913325 caaaatgaggatgattacgataaagactaacccccttacctta 20913367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 126 - 467
Target Start/End: Complemental strand, 20893894 - 20893551
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||||||||  ||||| ||| |||||||| ||||||||||||||| | |||||| |||| ||   | ||||||||||| ||||||||||||  |    
20893894 attctcatcatcaatttatgaatatgcatacccaaacaatgattcatcaaccacaacatcaattaacagtcataacatcaattgaacaagaatcataaat 20893795  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    ||||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||||| | |||||||||||||    
20893794 caatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaacaacaatcataca 20893695  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 422  Q
     |||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||| ||   |||||||||||||||||||||||||    
20893694 attatcatcaattcatgcatacaaacatatcatcacagttggagcaagaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatt 20893595  T
423 cacaaaatgatgatgattatggtaaagactaacccccttacctta 467  Q
     |||||||||||||||||||| | |||||||||||||||||||||    
20893594 -acaaaatgatgatgattatgatgaagactaacccccttacctta 20893551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 227 - 393
Target Start/End: Original strand, 51452589 - 51452755
Alignment:
227 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 326  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||| ||||||||||||||||||||| |    
51452589 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 51452688  T
327 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
51452689 tattatcaattcatgcatacaaacatatcatcaaagttgaagcacgaatttagcaacaattatccat 51452755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 130 - 466
Target Start/End: Original strand, 22227808 - 22228146
Alignment:
130 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 229  Q
    |||||||||||||||||| ||| | ||||||||||| |||||||||  |||||||| |||| |||  | ||||||||||| |||||||||| | |||||     
22227808 tcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctcaaa 22227907  T
230 tcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacactta 328  Q
    | ||| ||||| |  |||| |||| | |||   ||||||||||||||||| |||||| ||||||||| |||||| ||||| || |||||||||||| |||    
22227908 ttaacaacaacttagcaaaattcaacaattggacacaattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaatta 22228007  T
329 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaattcacaa 427  Q
    | ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||| |||  | ||| || | |  ||||||||||||  |||||| || ||    
22228008 tcatcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgcaaaa 22228107  T
428 aatgatgatgattatggtaaagactaacccccttacctt 466  Q
    | ||   ||||||||| |||  |||||||||||||||||    
22228108 attgtacatgattatgataataactaacccccttacctt 22228146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 130 - 466
Target Start/End: Original strand, 22232505 - 22232843
Alignment:
130 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 229  Q
    |||||||||||||||||| ||| | ||||||||||| |||||||||  |||||||| |||| |||  | ||||||||||| |||||||||| | |||||     
22232505 tcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctcaaa 22232604  T
230 tcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacactta 328  Q
    | ||| ||||| |  |||| |||| | |||   ||||||||||||||||| |||||| ||||||||| |||||| ||||| || |||||||||||| |||    
22232605 ttaacaacaacttagcaaaattcaacaattggacacaattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaatta 22232704  T
329 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaattcacaa 427  Q
    | ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||| |||  | ||| || | |  ||||||||||||  |||||| || ||    
22232705 tcatcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgcaaaa 22232804  T
428 aatgatgatgattatggtaaagactaacccccttacctt 466  Q
    | ||   ||||||||| |||  |||||||||||||||||    
22232805 attgtacatgattatgataataactaacccccttacctt 22232843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 126 - 381
Target Start/End: Original strand, 2116249 - 2116506
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagc- 224  Q
    |||||||| |||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||| || | | |||||||||||  ||||||||| |       
2116249 attctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaaata 2116348  T
225 tcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatac 323  Q
    |||| | ||| | ||| |  |||| |||| | |||  |||| ||||||| ||||| |||||| ||||||||| |||||| ||||| ||||||||||||||    
2116349 tcaaattaacaataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatac 2116448  T
324 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 381  Q
    | |||| ||||||||||||||||||||||| ||||| |||   ||||||||| |||||    
2116449 aattatcatcaattcatgcatacaaacataacatcacagtaaaagcacgaatctagca 2116506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 261 - 468
Target Start/End: Original strand, 45051554 - 45051759
Alignment:
261 gcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 360  Q
    |||||||||||| ||||| |||||| ||||||||| |||||| ||||| ||||||||||||||| |||| |||||||||||||||||||| || |||||     
45051554 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatcac 45051653  T
361 agttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaaccccc 459  Q
    |||  || ||||||| |||||  |||  | ||| || | |  ||||||||||||  ||||||   |||||| |  ||||||||| |||||||||||||||    
45051654 agtaagaacacgaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaat--gcaaaatca-catgattatgataaagactaaccccc 45051750  T
460 ttaccttaa 468  Q
    |||||||||    
45051751 ttaccttaa 45051759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 435 - 507
Target Start/End: Original strand, 21860334 - 21860406
Alignment:
435 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
21860334 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 21860406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 435 - 507
Target Start/End: Complemental strand, 44034903 - 44034831
Alignment:
435 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
44034903 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 44034831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 126 - 381
Target Start/End: Complemental strand, 5072645 - 5072388
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||||||||||||||| ||| | ||||||||||| |||||| ||  |||  ||| | || |||  | ||||||| ||| ||||| |||| | ||    
5072645 attctcatcatcaatccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattcataacatcatttgaacaagcatcacatct 5072546  T
226 caattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatac 323  Q
    ||| | ||| ||||| |  |  ||||||| | |||  ||||||| |||||||||| |||||| | ||||| | |||||| ||||| ||||||||||||||    
5072545 caacttaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatac 5072446  T
324 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 381  Q
    |  ||  ||||||||||||||| ||||||| ||||| ||   ||||||||||||||||    
5072445 aactaacatcaattcatgcatataaacataacatcacagcaagagcacgaatttagca 5072388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 126 - 381
Target Start/End: Complemental strand, 18601375 - 18601118
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||||||||||||||| ||| | ||||||||||| |||||| ||  |||  ||| | || |||  | ||||||| ||| ||||| |||| | ||    
18601375 attctcatcatcaatccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattcataacatcatttgaacaagcatcacatct 18601276  T
226 caattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatac 323  Q
    ||| | ||| ||||| |  |  ||||||| | |||  ||||||| |||||||||| |||||| | ||||| | |||||| ||||| ||||||||||||||    
18601275 caacttaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatac 18601176  T
324 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 381  Q
    |  ||  ||||||||||||||||||||||| ||||| ||   ||||| ||||||||||    
18601175 aactaacatcaattcatgcatacaaacataacatcacagcaagagcatgaatttagca 18601118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 51452531 - 51452591
Alignment:
1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactccatcataat 61  Q
    |||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
51452531 atgagatcaacatcatcaatcaactacaatcataacatataatcatacactccatcataat 51452591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 437 - 507
Target Start/End: Original strand, 27675120 - 27675190
Alignment:
437 gattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||| ||||  |||||||||||||||||||||||||||| | ||||| | ||||||||||||||||||    
27675120 gattatgataaattctaacccccttaccttaattatctccaattcctagcccaagcttcactttagctcct 27675190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 450 - 507
Target Start/End: Original strand, 41218743 - 41218800
Alignment:
450 actaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    |||||||||||||||||||||||| ||||||| |||||| ||||||||||| ||||||    
41218743 actaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcct 41218800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 45051437 - 45051496
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatc 185  Q
    |||||||| |||||| |||||| ||| ||||||||||| |||||||||||| ||||||||    
45051437 attctcataatcaattcatgaatatgcatacccaagcagtgattcatcaacaataacatc 45051496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 451 - 507
Target Start/End: Complemental strand, 13376768 - 13376712
Alignment:
451 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||||||||||||||||| |||| | ||||| | | ||||||||||||||||    
13376768 ctaacccccttaccttaattatcaccaattcctagcccaaacttcactttagctcct 13376712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 451 - 507
Target Start/End: Original strand, 20177513 - 20177569
Alignment:
451 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    |||||||| |||||||||||||| |||| | ||||| | ||||||||||||||||||    
20177513 ctaaccccattaccttaattatcaccaattcctagcccaagcttcactttagctcct 20177569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 377
Target Start/End: Complemental strand, 22143402 - 22143361
Alignment:
336 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 377  Q
    |||||||||||||||| ||||||| |||| ||||||||||||    
22143402 ttcatgcatacaaacacatcatcatagttagagcacgaattt 22143361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 200; Significance: 1e-109; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 126 - 505
Target Start/End: Complemental strand, 19794972 - 19794591
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||| |   || ||||||||||| |||||||||||| ||    
19794972 attctcatcatcaatccatgaatatgcatacccaagcaatgattcatcaactataacatcaattaacggaaataacatcaattgaacaagaatcataact 19794873  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    ||||||||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||||| |||||||||||||||    
19794872 caattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcataca 19794773  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 422  Q
     |||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||| |||||| ||   ||||||||||||||||||| |||||    
19794772 attattatcaattcatgcatacaaacatatcatcacagttggagcacgaatttaacgacaattatccattatgcaaaaattcatacaacatttg-aaatt 19794674  T
423 cacaaaatgatgatgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctc 505  Q
     ||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
19794673 tacaaaataatgatgattatgatgaagactaacccccttaccttaattatctccaactattagctctagcttcacttttgctc 19794591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 178; E-Value: 9e-96
Query Start/End: Original strand, 130 - 507
Target Start/End: Complemental strand, 43643221 - 43642841
Alignment:
130 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 229  Q
    ||||||||||| |||||| ||| ||||||||||| |||||||||||||| |||||| |||| || ||| | ||||||||| |||||||||||| |||||     
43643221 tcatcatcaattcatgaatatgcatacccaagcagtgattcatcaactacaacatcaattaacagcaatagcatcaattgaacaagaatcatatctcaaa 43643122  T
230 tcaactacaac-atgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacactta 328  Q
    | ||  ||||| | |  ||||||| | |||  |||||||||||| |||||  ||||| | | ||||| |||||| ||||| ||||||||||||||| |||    
43643121 ttaataacaactaagaaaaattcaccaattgagcacaattttcacaacttaacatttgttcctatttgaacatgtaatttcaccaacaatcatacaatta 43643022  T
329 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaattcaca 426  Q
    | ||||||||||||||||||||||||||||| | ||||||||| |||||||||||||| |||||  ||   |||||||||||||||||||||||||||||    
43643021 tcatcaattcatgcatacaaacatatcatcacaattggagcacaaatttagcaacaattatccactatgcaaaaattcatacaacatttgaaaattcaca 43642922  T
427 aaatgatgatgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||||||||||| |||||||||||| |||| ||||||||||||||||||| |||||||||||||||||| ||||||    
43642921 aaatgatgatgattatgataaagactaacctccttcccttaattatctccaactattagctctagcttcacttttgctcct 43642841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 126 - 467
Target Start/End: Complemental strand, 36982709 - 36982364
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||||||||| |||||| ||| |||||||| ||||||||||||||| | |||||| |||| || ||| ||||||||||| ||| |||||||| ||    
36982709 attctcatcatcaattcatgaatatgcatacccaaacaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacaggaatcataact 36982610  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    ||||||||| ||||| || |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||||| |||| ||||| ||||    
36982609 caattcaacaacaacttggcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccagcaatcttaca 36982510  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 422  Q
     |||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||    
36982509 attatcatcaattcatgaatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatt 36982410  T
423 cac-aaaatgatgatgattatggtaaagactaacccccttacctta 467  Q
     || |||||||||||||||||| |||||||||||||||||||||||    
36982409 tacaaaaatgatgatgattatgataaagactaacccccttacctta 36982364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 130 - 507
Target Start/End: Complemental strand, 20627577 - 20627198
Alignment:
130 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 229  Q
    ||||| ||||| |||||| ||  |||||||||||||||||||||||| | |||| | |||| || | | || |||||||| |||||||| | | |||||     
20627577 tcatcctcaattcatgaatatccatacccaagcaatgattcatcaaccacaacaccaattaacaaccataaaatcaattgaacaagaattaaatctcaaa 20627478  T
230 tcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacactta 328  Q
    | ||| ||||| |  |||| |||| | |||  |||||||||||| || || |||||| |||||||||  ||||| ||||| ||||||||||||||| |||    
20627477 ttaacaacaacttaacaaaattcaccaattgagcacaattttcacaagttatcatttttacatatttggacatgtaatttcaccaacaatcatacaatta 20627378  T
329 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaa-ttcacaa 427  Q
    | |||||||| |||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||| ||||||||||| ||||||||| || ||||    
20627377 tcatcaattcgtgcatacaaacatatcatcacagttggagcacgaatttaacaacaattatccataatcataattcatacaatatttgaaaattttacaa 20627278  T
428 aatgatgatgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||    
20627277 aatgatgatgattatgataaagactaaccccgttaccttaattatctccaactattagctctagcttcacttttgctcct 20627198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 126 - 467
Target Start/End: Original strand, 462733 - 463075
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||| ||| ||||| |||||| ||| |||||||||||||||||||||||  |  ||||| |||| || | | ||||||||||| |||||||||||| ||    
462733 attcttatcctcaattcatgaatatgcatacccaagcaatgattcatcaatcacgacatcaattaacagccataacatcaattgaacaagaatcataact 462832  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    ||||  ||| ||||| |  |||| |||| | |||   ||||||||||| ||||| |||||| ||||||||| |||||| ||||| |||||||||| ||||    
462833 caatctaacaacaacttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttaca 462932  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattca 424  Q
     |||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |    
462933 attatcatcaattcatgcatacaaatatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaattta 463032  T
425 caaaatgatgatgattatggtaaagactaacccccttacctta 467  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
463033 caaaatgatgatgattatgataaagactaacccccttacctta 463075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 126 - 467
Target Start/End: Original strand, 8891237 - 8891581
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||| ||||| |||||| ||| |||||||||||||||||||||||| | |||||| ||||  | | | ||||||||||| |||||||||||| ||    
8891237 attctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatagccataacatcaattgaacaagaatcataact 8891336  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    ||||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| |||||  ||||||||||||||    
8891337 caatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcgccaacaatcataca 8891436  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 422  Q
     |||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||    
8891437 attatcatcaattcatgcatacaaacatattatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatt 8891536  T
423 cacaaaatgatgatgattatggtaaagactaacccccttacctta 467  Q
     |||||||||||||||||||| |||||||||||||| ||||||||    
8891537 tacaaaatgatgatgattatgataaagactaacccctttacctta 8891581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 227 - 393
Target Start/End: Complemental strand, 19689567 - 19689401
Alignment:
227 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 326  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||| ||||||||||||||||||||| |    
19689567 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 19689468  T
327 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
19689467 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 19689401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 227 - 393
Target Start/End: Original strand, 23820168 - 23820334
Alignment:
227 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 326  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||| ||||||||||||||||||||| |    
23820168 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 23820267  T
327 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
23820268 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 23820334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 130 - 467
Target Start/End: Complemental strand, 24341653 - 24341309
Alignment:
130 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 229  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||   |||||| |||| || ||| ||||||||||| ||| |||||||| ||||||    
24341653 tcatcatcaattcatgaatatgtatacccaagcaatgattcatcaacaggaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaat 24341554  T
230 tcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacactta 328  Q
    ||||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||  ||||| ||||||||||||||| |||    
24341553 tcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatataatttcaccaacaatcatacaatta 24341454  T
329 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaattcaca 426  Q
    | ||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||| |||||  ||   ||||||||||| ||||||||||| |  ||    
24341453 tcatcaattcatgcatacaaacatatcatcacagttgaagcatgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgca 24341354  T
427 aa----atgatgatgattatggtaaagactaacccccttacctta 467  Q
    ||    ||||||||||||||| | |||||||||||||||||||||    
24341353 aaaatgatgatgatgattatgatgaagactaacccccttacctta 24341309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 227 - 393
Target Start/End: Complemental strand, 14906606 - 14906440
Alignment:
227 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 326  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||| ||||||| ||||||||||||||||||||| |    
14906606 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 14906507  T
327 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
14906506 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 14906440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 227 - 393
Target Start/End: Original strand, 20015108 - 20015274
Alignment:
227 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 326  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||| ||||||| ||||||||||||||||| ||| |    
20015108 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcacacaat 20015207  T
327 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
20015208 tattatcaattcatgcatgcaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 20015274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 126 - 393
Target Start/End: Complemental strand, 25265658 - 25265390
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||||||||| |||||| ||| |||||||||| ||||||||| ||| | |||||| |||| || ||||||||||||||| ||| |  ||  | |     
25265658 attctcatcatcaattcatgaatatgcatacccaagccatgattcataaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatca 25265559  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
     |||||||| |||||||  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||| ||||| |||||||||||||||    
25265558 taattcaacaacaacatagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcataca 25265459  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
     |||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||    
25265458 attatcatcaattcatgcatacaaacataacatcaaagttagagcacgaatttagcaacaattatccat 25265390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 261 - 393
Target Start/End: Complemental strand, 17396784 - 17396653
Alignment:
261 gcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 360  Q
    ||||||| |||||||||| |||||| ||| |||||||||||| ||||| ||||||||||||||| | || | |||||||||||||| |||||||||||||    
17396784 gcacaatattcataacttatcatttttacttatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaa 17396686  T
361 agttggagcacgaatttagcaacaatcatccat 393  Q
    |||||||||||||||||||||||||| ||||||    
17396685 agttggagcacgaatttagcaacaattatccat 17396653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 130 - 343
Target Start/End: Complemental strand, 7508108 - 7507894
Alignment:
130 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgca-caagaatcatagctcaa 228  Q
    |||||||||||||||||| ||| ||||||||||| |||||||||||| | |||||| | || || ||| ||||||||||  | || |||||||| |||||    
7508108 tcatcatcaatccatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattaaaacatgaatcatatctcaa 7508009  T
229 ttcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacactt 327  Q
    || ||| ||||| | | |||||||| | |||   ||||||||||||||||| | |||| ||||||||| |||||| ||||| ||||||||||||||| ||    
7508008 tt-aacaacaacttagccaaattcaccaattgaacacaattttcataacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaatt 7507910  T
328 attatcaattcatgca 343  Q
    || |||||||||||||    
7507909 atcatcaattcatgca 7507894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 126 - 381
Target Start/End: Complemental strand, 19886918 - 19886661
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||||||||||||||| ||| ||||||||||||| |||||||||  |||| ||| | || |||  | ||||||| ||| |||||||||| | ||    
19886918 attctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaact 19886819  T
226 caattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatac 323  Q
    ||| | ||| ||||| |  |  ||||||| |  ||| ||||||| |||||||||| ||| || | ||||| | |||||| ||||| ||||||||| ||||    
19886818 caaattaacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatac 19886719  T
324 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 381  Q
    |  ||  ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
19886718 aactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 19886661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 371 - 467
Target Start/End: Original strand, 22863169 - 22863267
Alignment:
371 cgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctta 467  Q
    |||||||||||||||| |||||| ||   ||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
22863169 cgaatttagcaacaattatccattatgcaaaaattcatacaacaattgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 22863267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 435 - 507
Target Start/End: Original strand, 22275045 - 22275117
Alignment:
435 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
22275045 atgattatgataaaggctaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 22275117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 435 - 507
Target Start/End: Original strand, 22284278 - 22284350
Alignment:
435 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
22284278 atgattatgataaagactaacccccttaccttaattatctccaactattagctctaacttcacttttgctcct 22284350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 436 - 507
Target Start/End: Original strand, 15633538 - 15633609
Alignment:
436 tgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    |||||||| |||||||||||| |||||||||||||||||||||||| || ||||||||||||||| ||||||    
15633538 tgattatgataaagactaacctccttaccttaattatctccaactattaactctagcttcacttttgctcct 15633609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 14906664 - 14906604
Alignment:
1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactccatcataat 61  Q
    |||||||  ||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
14906664 atgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataat 14906604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 20015050 - 20015110
Alignment:
1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactccatcataat 61  Q
    |||||||  ||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
20015050 atgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataat 20015110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 23820110 - 23820170
Alignment:
1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactccatcataat 61  Q
    |||||||  ||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
23820110 atgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataat 23820170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 451 - 507
Target Start/End: Original strand, 43646232 - 43646288
Alignment:
451 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||||||||||||||||| |||| | ||||| | ||||||||||||||||||    
43646232 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctcct 43646288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 26 - 61
Target Start/End: Complemental strand, 19689600 - 19689565
Alignment:
26 acaatcataacatataatcatacactccatcataat 61  Q
    ||||||||||||||||||||||||||||||||||||    
19689600 acaatcataacatataatcatacactccatcataat 19689565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 435 - 467
Target Start/End: Complemental strand, 17396599 - 17396567
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    |||||||||||||||||||||||||||||||||    
17396599 atgattatggtaaagactaacccccttacctta 17396567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 19669335 - 19669279
Alignment:
153 atacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattg 209  Q
    |||||||||| |||| |||||||| ||||||||  |||||| |||||||||||||||    
19669335 atacccaagccatgaatcatcaacaataacatcacttagcaacaacaacatcaattg 19669279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 507
Target Start/End: Original strand, 19660221 - 19660272
Alignment:
456 ccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    |||||||||||||||||| |||| | ||||| | ||||||||||||||||||    
19660221 ccccttaccttaattatcaccaattcctagcccaagcttcactttagctcct 19660272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 468
Target Start/End: Complemental strand, 19689347 - 19689314
Alignment:
435 atgattatggtaaagactaacccccttaccttaa 468  Q
    ||||||||| ||||||||||||||||||||||||    
19689347 atgattatgataaagactaacccccttaccttaa 19689314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Complemental strand, 9652828 - 9652796
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
9652828 atgattatgataaagactaacccccttacctta 9652796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Complemental strand, 14906386 - 14906354
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
14906386 atgattatgataaagactaacccccttacctta 14906354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Original strand, 23820388 - 23820420
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
23820388 atgattatgataaagactaacccccttacctta 23820420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 451 - 507
Target Start/End: Original strand, 25305769 - 25305825
Alignment:
451 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||||||||||||||||| |||| |  |||| | |||||||||||| |||||    
25305769 ctaacccccttaccttaattatcaccaattcatagcccaagcttcactttaactcct 25305825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 176; Significance: 1e-94; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 126 - 467
Target Start/End: Original strand, 1119 - 1462
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||||||||| |||||| ||| | ||||||||||| |||||||||| | || ||| |||| || | | ||||||||||| |||||||||| | ||    
1119 attctcatcatcaattcatgaatatgcacacccaagcaattattcatcaaccacaatatcaattaacaaccataacatcaattgaacaagaatcaaatct 1218  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    ||| | ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||||| |||||||||||||||    
1219 caaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcataca 1318  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaa-ttc 423  Q
     ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||| |||    
1319 attattatcaattcatgcatactaacatatcatcaaagttggagcacgaatttagcaacaattatccataagaaaaattcatacaacatttgaaaatttc 1418  T
424 acaaaatgatgatgattatggtaaagactaacccccttacctta 467  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
1419 acaaaatgatgatgattatgataaagactaacccccttacctta 1462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 128 - 467
Target Start/End: Complemental strand, 3848 - 3508
Alignment:
128 tctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctca 227  Q
    |||| |||||||||||| || ||| ||||||||||||| |||| ||||  | |||||| |||| |||| | ||||||||||| |||||||||| | ||||    
3848 tctcctcatcaatccatcaatatgcatacccaagcaattattcctcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctca 3749  T
228 attcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 326  Q
    | | ||| ||||| |  |||| || | | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||||| ||||||||||||||| |    
3748 aattaacaacaacttagcaaaatttaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaat 3649  T
327 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattcaca 426  Q
    ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||| |||    
3648 tatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatctataatcaaaattcatacaacttttgaaaatttaca 3549  T
427 aaatgatgatgattatggtaaagactaacccccttacctta 467  Q
    |||||| ||||||||||  ||||||||||||||||||||||    
3548 aaatgaagatgattatgacaaagactaacccccttacctta 3508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 175; Significance: 5e-94; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 126 - 467
Target Start/End: Original strand, 48593 - 48935
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| ||||  | | | ||||||||||| |||||||||||| ||    
48593 attctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatagccataacatcaattgaacaagaatcataact 48692  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    ||||  | | ||||| |  |||| |||| | | |  |||||||||||| ||||| |||||| | | ||||| |||||| ||||| |||||||||||||||    
48693 caatctagcaacaacttagcaaaattcaccaactgagcacaattttcacaacttatcattttttcctatttgaacatgtaatttcaccaacaatcataca 48792  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattca 424  Q
     |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |    
48793 attatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaattta 48892  T
425 caaaatgatgatgattatggtaaagactaacccccttacctta 467  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
48893 caaaatgatgatgattatgataaagactaacccccttacctta 48935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 126 - 359
Target Start/End: Original strand, 36088 - 36323
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||||||||||||||| ||| | ||||||||||| |||||||||  |||  ||| | || |||  | |||||| |||| ||| |||||| | ||    
36088 attctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcatattatcaaataacattcataacatctattgaacatgaatcacatct 36187  T
226 caattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatac 323  Q
    ||| | ||| ||||| |  |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | || ||| ||||| ||||||||||||||    
36188 caaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatac 36287  T
324 acttattatcaattcatgcatacaaacatatcatca 359  Q
    |  ||  |||||||||| |||||||||||| |||||    
36288 aactaacatcaattcatacatacaaacataacatca 36323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 171; Significance: 1e-91; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 126 - 468
Target Start/End: Complemental strand, 37181 - 36836
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || | | ||| ||||||| |||||| ||||| ||    
37181 attctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacgtcaattgaacaagattcataact 37082  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    |||| |||| ||||| |  |||| |||| | |||| |||||||||||| ||||| |||||| ||||||||| |||||| ||||| |||||||| | ||||    
37081 caatccaaccacaacttagcaaaattcaccaatttagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaagcttaca 36982  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 422  Q
     |||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||| ||   |||||||||||||||||||||| ||    
36981 attatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaattt 36882  T
423 cacaaaatgatgatgattatggtaaagactaacccccttaccttaa 468  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
36881 cacaaaatgatgatgattatgataaagactaacccccttaccttaa 36836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 451 - 507
Target Start/End: Complemental strand, 15383 - 15327
Alignment:
451 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||||||||||||||||||||||||| |||| | ||||||||||| ||||||    
15383 ctaacccccttaccttaattatctccaactattagcccaagcttcacttttgctcct 15327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 168; Significance: 8e-90; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 126 - 464
Target Start/End: Original strand, 19201 - 19543
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || ||| ||||||||||| ||| |||||||| ||    
19201 attctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacaggaatcataact 19300  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    ||||||||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||||| |||||||||| ||||    
19301 caattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttaca 19400  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 422  Q
     |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||    
19401 attatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatt 19500  T
423 cac-aaaatgatgatgattatggtaaagactaacccccttacc 464  Q
     || ||||| |||||||||||| | ||||||||||||||||||    
19501 tacaaaaattatgatgattatgatgaagactaacccccttacc 19543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 126 - 393
Target Start/End: Original strand, 21285 - 21553
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || ||| ||||||||||| ||| |||||||| ||    
21285 attctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacaggaatcataact 21384  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    ||||||||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||||| |||||||||| ||||    
21385 caattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttaca 21484  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
     |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
21485 attatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccat 21553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 163; Significance: 8e-87; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 142 - 467
Target Start/End: Original strand, 171916 - 172242
Alignment:
142 catgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 241  Q
    |||||| ||| ||||| |||||||||||||||||| | |||||| |||| || | | ||||||||||| ||||||||| || ||||||||||| |||||     
171916 catgaatatgcatacctaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcgtaactcaattcaaccacaact 172015  T
242 tgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcat 340  Q
    |  |||| |||| | |||| |||||||||||| ||||| |||||| | | ||||| |||||| ||||| |||| |||||||||| |||| ||||||||||    
172016 tagcaaaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcat 172115  T
341 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattcacaaaatgatgatgatt 440  Q
     |||||||||||||||||| |||||||||||| ||||||||||| | |||||||||||||||| |||||||||||||||||| |||||||||||||||||    
172116 ccatacaaacatatcatcacagttggagcacgtatttagcaacagttatccataatcaaaatttatacaacatttgaaaatttacaaaatgatgatgatt 172215  T
441 atggtaaagactaacccccttacctta 467  Q
    ||| |||||||||||||||||||||||    
172216 atgataaagactaacccccttacctta 172242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 142 - 467
Target Start/End: Original strand, 177619 - 177945
Alignment:
142 catgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 241  Q
    |||||| ||| ||||| |||||||||||||||||| | |||||| |||| || | | ||||||||||| ||||||||| || ||||||||||| |||||     
177619 catgaatatgcatacctaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcgtaactcaattcaaccacaact 177718  T
242 tgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcat 340  Q
    |  |||| |||| | |||| |||||||||||| ||||| |||||| | | ||||| |||||| ||||| |||| |||||||||| |||| ||||||||||    
177719 tagcaaaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcat 177818  T
341 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattcacaaaatgatgatgatt 440  Q
     |||||||||||||||||| |||||||||||| ||||||||||| | |||||||||||||||| |||||||||||||||||| |||||||||||||||||    
177819 ccatacaaacatatcatcacagttggagcacgtatttagcaacagttatccataatcaaaatttatacaacatttgaaaatttacaaaatgatgatgatt 177918  T
441 atggtaaagactaacccccttacctta 467  Q
    ||| |||||||||||||||||||||||    
177919 atgataaagactaacccccttacctta 177945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 163; Significance: 8e-87; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 126 - 467
Target Start/End: Original strand, 23506960 - 23507302
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||||||||| |||||| ||| ||||||||||||| |||||||||| | |||||| |||| || | | ||||||||||| |||||||||| | ||    
23506960 attctcatcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcaaatct 23507059  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    ||| | ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||||| |||||||||||||||    
23507060 caaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcataca 23507159  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattca 424  Q
     |||| ||||||||||||||||||||||||||||| |  ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||  | |    
23507160 attatcatcaattcatgcatacaaacatatcatcacaaatggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaatctta 23507259  T
425 caaaatgatgatgattatggtaaagactaacccccttacctta 467  Q
    |||||||  |||||||||| |||||||||||||||||||||||    
23507260 caaaatggagatgattatgataaagactaacccccttacctta 23507302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 126 - 467
Target Start/End: Complemental strand, 27182815 - 27182471
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||||||||| |||||| ||| |||| ||||||||||||||||||| | |||||| |||| || | | ||||||||||| |||||||||||| ||    
27182815 attctcatcatcaattcatgaatatgcatactcaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataact 27182716  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    ||||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||||| | |||||||||||||    
27182715 caatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcatcaacaatcataca 27182616  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 422  Q
     |||| |||| |||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||| ||   |||||||||||||||||||||||||    
27182615 attatcatcagttcatgcatacaaacatatcatcacagttggagcatgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatt 27182516  T
423 cacaaaatgatgatgattatggtaaagactaacccccttacctta 467  Q
     |||||||||||||||||||| | |||||||||||||||||||||    
27182515 tacaaaatgatgatgattatgatgaagactaacccccttacctta 27182471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 130 - 467
Target Start/End: Complemental strand, 18531331 - 18530988
Alignment:
130 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 229  Q
    ||||||||||| |||||| |||||||||| ||||||||||||||||| | |||||| |||| || ||| ||||||||||| ||| |||||||| ||||||    
18531331 tcatcatcaattcatgaatatgtatacccgagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacatgaatcatatctcaat 18531232  T
230 tcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacactta 328  Q
    ||||| ||||| |  |||| |||| | |||   ||||||||||| |||||| ||||| |||||| || |||||| ||||| ||||||||||||||| |||    
18531231 tcaacaacaacttagcaaaattcaccaattgaacacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaatta 18531132  T
329 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcc-ataatcaaa-attcatacaacatttgaaaattcaca 426  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| || || ||| |||||||| ||||||||||| |  ||    
18531131 tcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaacattcataccacatttgaaaaattgca 18531032  T
427 aaatgatgat---gattatggtaaagactaacccccttacctta 467  Q
    ||||||||||   ||||||| | |||||||||||||||||||||    
18531031 aaatgatgatgacgattatgatgaagactaacccccttacctta 18530988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 130 - 467
Target Start/End: Complemental strand, 22054097 - 22053753
Alignment:
130 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 229  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||||| | |||||| |||| || ||| ||||||||||| ||| |||||||| ||||||    
22054097 tcatcatcaattcatgaatatgtagacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacatgaatcatatctcaat 22053998  T
230 tcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacactta 328  Q
    ||||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||| ||||| |||||||||||||||  ||    
22053997 tcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaacta 22053898  T
329 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaa--ttca 424  Q
    | |||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||  ||   ||||||||||| |||||||||||  ||||    
22053897 tcatcaattcatacatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaatttca 22053798  T
425 caaa--atgatgatgattatggtaaagactaacccccttacctta 467  Q
     |||  ||||||||||||||| | |||||||||||||||||||||    
22053797 aaaatgatgatgatgattatgatgaagactaacccccttacctta 22053753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 227 - 393
Target Start/End: Original strand, 20623066 - 20623232
Alignment:
227 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 326  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||| ||||||||||||||||||||| |    
20623066 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 20623165  T
327 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
20623166 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 20623232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 227 - 393
Target Start/End: Complemental strand, 21233694 - 21233528
Alignment:
227 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 326  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||| ||||||||||||||||||||| |    
21233694 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 21233595  T
327 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
21233594 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 21233528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 230 - 393
Target Start/End: Original strand, 37052844 - 37053007
Alignment:
230 tcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacacttat 329  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||||||||||||||||| ||||    
37052844 tcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcatttccacatattcaaacatgtaatttaaccaacaatcatacaattat 37052943  T
330 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
37052944 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 37053007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 227 - 393
Target Start/End: Original strand, 16536294 - 16536460
Alignment:
227 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 326  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||| ||||||| ||||||||||||||||||||| |    
16536294 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 16536393  T
327 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
16536394 tattataaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 16536460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 227 - 391
Target Start/End: Complemental strand, 25900571 - 25900408
Alignment:
227 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 326  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||  ||||||| ||||||  ||||||||||||||||||||| |    
25900571 aattcaacaacaacatgtcaa-ttcatccattttgcacaattttcataacttttcattttcacatattcaaacatataatttaaccaacaatcatacaat 25900473  T
327 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcc 391  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
25900472 tatcatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatcc 25900408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 142 - 393
Target Start/End: Original strand, 34939289 - 34939540
Alignment:
142 catgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 241  Q
    |||||| ||| ||||||||||| |||||||||||| | |||||| |||| || ||| |||||||| || |||||||||||| ||||||||| | |  ||     
34939289 catgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacagcaataacatcaactgaacaagaatcataactcaattca-caatgact 34939387  T
242 tgtcaaattc-atccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcat 340  Q
    |  |||| || ||| |||  ||||||||||||||||||| ||||| |||||| || ||||||  |||| ||||||||||||||| |||| ||||||||||    
34939388 tagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcat 34939487  T
341 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
    ||||||||||||| ||||| |||| ||||||||||||||||||| | ||||||    
34939488 gcatacaaacataacatcacagttagagcacgaatttagcaacagttatccat 34939540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 126 - 381
Target Start/End: Complemental strand, 4200242 - 4199985
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||||||| ||||||| ||| | ||||||||||| |||||||||  |||| ||| | || |||  | ||||||||||| ||| |||||| | ||    
4200242 attctcatcatcaacccatgaatatgcaaacccaagcaatcattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatct 4200143  T
226 caattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatac 323  Q
    ||| ||||| |||||||  |  ||||||| | |||| ||| ||| |||||||||| |||||| | ||||| | |||||| ||||| ||||||||||||||    
4200142 caaatcaacaacaacataagagaaattcaccaatttagcataatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatac 4200043  T
324 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 381  Q
    |  ||  ||||||||||||||||||||||| ||||| |    ||||||||||||||||    
4200042 aactaacatcaattcatgcatacaaacataacatcacaacaagagcacgaatttagca 4199985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 126 - 381
Target Start/End: Complemental strand, 22366738 - 22366481
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||||||||||||||| ||| ||||||||||||| |||||||||  |||| ||| | || |||  | ||||||| ||| ||||| |||| | ||    
22366738 attctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagcatcacaact 22366639  T
226 caattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatac 323  Q
    ||| | ||| ||||| |  |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||||| ||||||||| ||||    
22366638 caaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatac 22366539  T
324 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 381  Q
    |  ||  ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
22366538 aactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 22366481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 126 - 381
Target Start/End: Original strand, 25426623 - 25426880
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||||||||||||||| ||| ||||||||||||| |||||||||  |||| ||| | || |||  | ||||||| ||| |||||||||| | ||    
25426623 attctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaact 25426722  T
226 caattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatac 323  Q
    ||| | ||| ||||| |  |  ||||||| |  ||| ||||||| |||||||||| |||||| | ||||| | |||||| ||||| ||||||||| ||||    
25426723 caaattaacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatac 25426822  T
324 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 381  Q
    |  ||  ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
25426823 aactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 25426880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 126 - 378
Target Start/End: Complemental strand, 18778249 - 18777995
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||||||||||||||| ||| ||||||||||||| |||||||||  |||| ||| | ||  ||  | ||||||| ||| |||||||||| | ||    
18778249 attctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataatattcataacatcatttgaacaagaatcacaact 18778150  T
226 caattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatac 323  Q
    ||| | ||| ||||| |  |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||||| ||||||||| ||||    
18778149 caaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatac 18778050  T
324 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattta 378  Q
    |  ||  ||||||||||||||||||||||| ||||| ||   |||||||||||||    
18778049 aactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaattta 18777995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 126 - 381
Target Start/End: Original strand, 12369 - 12626
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||||||||||||||| ||| ||||||||||||| |||||||||  |||| ||| | || |||  | ||||||| ||| |||||||||| | ||    
12369 attctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaact 12468  T
226 caattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatac 323  Q
    ||| | ||| ||||| |  |  ||||||| |  ||| ||||||| |||||||||| ||| || | ||||| | |||||| ||||| ||||||||| ||||    
12469 caaattaacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatac 12568  T
324 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 381  Q
    |  ||  ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
12569 aactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 12626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 261 - 381
Target Start/End: Complemental strand, 29188404 - 29188284
Alignment:
261 gcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 360  Q
    |||| ||||||| ||||| |||||| ||||||||| |||||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||| |||||     
29188404 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 29188305  T
361 agttggagcacgaatttagca 381  Q
    |||  |||||||||| |||||    
29188304 agtaagagcacgaatctagca 29188284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 126 - 381
Target Start/End: Original strand, 19499894 - 19500151
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||||||||||||||| ||| ||||| ||||||| ||| |||||  |||| ||| | || |||  | ||||||| ||| |||||||||| | ||    
19499894 attctcatcatcaatccatgaatatgcataccaaagcaattattaatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaact 19499993  T
226 caattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatac 323  Q
    ||| | ||| ||||| |  |  ||||||| |  ||| ||||||| |||||||||| |||||| | ||||| | |||||| ||||| ||||||||| ||||    
19499994 caaattaacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatac 19500093  T
324 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 381  Q
    |  ||  ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
19500094 aactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 19500151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 126 - 381
Target Start/End: Complemental strand, 21073852 - 21073595
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||||||||||||||| ||| ||||||||||||| |||||||||  |||| ||| | || |||  | ||||||| ||| |||||||||| | ||    
21073852 attctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattgataacatcatttgaacaagaatcacaact 21073753  T
226 caattcaactacaacatgtca--aattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatac 323  Q
    ||| | ||| ||||| |   |  |||||| |  ||| ||||||| |||||||||| |||||| | ||||| | |||||| ||||| ||||||||| ||||    
21073752 caaattaacaacaacttagaagaaattcaccactttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatac 21073653  T
324 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 381  Q
    |  ||  ||| ||||||||||||||||||| ||||| ||   ||||||||||||||||    
21073652 aactaacatccattcatgcatacaaacataacatcacagcaagagcacgaatttagca 21073595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 126 - 377
Target Start/End: Original strand, 27009836 - 27010089
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||| ||||||||||| ||| | ||||||||||| |||||| ||  |||| ||| | || |||  | ||||||| ||| ||||| |||| | ||    
27009836 attctcatcaacaatccatgaatatgcaaacccaagcaattattcattaatcataatatcaaataacattcataacatcatttgaacaagcatcacatct 27009935  T
226 caattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatac 323  Q
    ||| | ||| ||||| |  |  ||||||| | |||  | ||||| |||||||||| |||||| |||||||||||||||| ||||| ||||||| ||||||    
27009936 caaattaacaacaacttaggagaaattcaccaattgagtacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacactcatac 27010035  T
324 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 377  Q
    | | || ||||||||||||||||||||||| ||||| ||   ||||||||||||    
27010036 aatcatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 27010089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 129 - 378
Target Start/End: Complemental strand, 43443649 - 43443398
Alignment:
129 ctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaa 228  Q
    ||||||||||||||||||| ||| | ||||||||||| |||||||||  |||| ||| | || |||  | ||||||| ||| |||||| ||| | |||||    
43443649 ctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagactcacatctcaa 43443550  T
229 ttcaactacaacatgtca--aattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 326  Q
     ||||| ||||| |   |  |||||| | |||  ||||||| |||||||||| |||||| | ||||| | |||||| ||||| |||||||||||||||      
43443549 atcaacaacaacttagaagaaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaac 43443450  T
327 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattta 378  Q
    ||  ||||||||||||||||||||||| ||||| ||   |||||||||||||    
43443449 taacatcaattcatgcatacaaacataacatcacagcaagagcacgaattta 43443398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 20623008 - 20623068
Alignment:
1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactccatcataat 61  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
20623008 atgagatcaacatcatcaatcaaccacaatcataacatataatcatacactccatcataat 20623068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 21233752 - 21233692
Alignment:
1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactccatcataat 61  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
21233752 atgagatcaacatcatcaatcaaccacaatcataacatataatcatacactccatcataat 21233692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 37052783 - 37052842
Alignment:
1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactccatcataa 60  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||    
37052783 atgagatcaacatcatcaatcaaccacaatcataacatataatcataccctccatcataa 37052842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 25900629 - 25900569
Alignment:
1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactccatcataat 61  Q
    |||||||  ||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
25900629 atgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataat 25900569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 16536236 - 16536296
Alignment:
1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactccatcataat 61  Q
    |||||||  ||||||||||||||| |||||||||||||| |||||||| ||||||||||||    
16536236 atgagatcaacatcatcaatcaactacaatcataacatacaatcataccctccatcataat 16536296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 29190531 - 29190478
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactat 179  Q
    |||||||| |||||| |||||| ||| |||||||||||||||||||||||||||    
29190531 attctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactat 29190478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 451 - 507
Target Start/End: Original strand, 11584389 - 11584445
Alignment:
451 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||||||||||||||||| ||||||| || ||| ||||||||||| ||||||    
11584389 ctaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcct 11584445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 17471849 - 17471768
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaat 207  Q
    ||||||||||||||| |||||| |||  |||||||||||||||||||  || ||||||||  ||| ||  ||||||||||||    
17471849 attctcatcatcaattcatgaatatgcgtacccaagcaatgattcattcacaataacatcagttaacaataacaacatcaat 17471768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 242
Target Start/End: Original strand, 19862203 - 19862319
Alignment:
127 ttctcatcatcaatccatgaac-atgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||||||  ||||||  ||| | |||||||  |||| |||||||| |||| |||  |||||| ||||||||||||||||||| || || || |     
19862203 ttctcatcatcaaatcatgaattatgaacacccaagtcatgaatcatcaacaataatatcacttagcaacaacaacatcaattgcacatgattcttatca 19862302  T
226 caattcaactacaacat 242  Q
    ||||||||| |||||||    
19862303 caattcaacaacaacat 19862319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 451 - 507
Target Start/End: Complemental strand, 21222519 - 21222463
Alignment:
451 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||| ||||||||||||| |||| | ||||| | ||||||||||||||||||    
21222519 ctaacccccataccttaattatcaccaattcctagcccaagcttcactttagctcct 21222463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 242
Target Start/End: Original strand, 23493913 - 23494029
Alignment:
127 ttctcatcatcaatccatgaac-atgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||||||  ||||||  ||| | |||||||| |||| |||||| | | ||||||  |||||| ||||||||||||||| ||| ||||| || |     
23493913 ttctcatcatcaaatcatgaattatgaacacccaagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaattgaacatgaatcttatca 23494012  T
226 caattcaactacaacat 242  Q
    ||||||||| |||||||    
23494013 caattcaacaacaacat 23494029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 296 - 386
Target Start/End: Original strand, 32950861 - 32950951
Alignment:
296 aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 386  Q
    ||||||| ||||| | | ||||||||||| |||| ||||| |||| || || || ||| ||||| |||| ||||||||||||| |||||||    
32950861 aaacatgtaatttcaaccacaatcatacaattatcatcaaatcatacacacgaaaataacatcacagttagagcacgaatttaacaacaat 32950951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 377
Target Start/End: Complemental strand, 21310750 - 21310709
Alignment:
336 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 377  Q
    ||||||||| |||||||||||||| |||| ||||||||||||    
21310750 ttcatgcattcaaacatatcatcatagttagagcacgaattt 21310709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 377
Target Start/End: Complemental strand, 23981557 - 23981516
Alignment:
336 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 377  Q
    |||||||||||||||||||||||| | || ||||||||||||    
23981557 ttcatgcatacaaacatatcatcataattagagcacgaattt 23981516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 377
Target Start/End: Original strand, 29918131 - 29918212
Alignment:
297 aacatggaatttaaccaacaatcatacacttattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 377  Q
    |||||| ||||| ||||||||  || || |||| ||||||| |||| || |||||||||||||| | |||||||||||||||    
29918131 aacatgcaatttcaccaacaacaattcaattatcatcaatttcatgtattcaaacatatcatcataattggagcacgaattt 29918212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 451 - 507
Target Start/End: Complemental strand, 5450752 - 5450696
Alignment:
451 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||||||||||||||||   ||| | ||||| | ||||||||||||||||||    
5450752 ctaacccccttaccttaattattatcaattcctagcccaagcttcactttagctcct 5450696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Original strand, 16105967 - 16105999
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
16105967 atgattatgataaagactaacccccttacctta 16105999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Original strand, 20623286 - 20623318
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
20623286 atgattatgataaagactaacccccttacctta 20623318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Complemental strand, 21233474 - 21233442
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
21233474 atgattatgataaagactaacccccttacctta 21233442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Complemental strand, 25900352 - 25900320
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
25900352 atgattatgataaagactaacccccttacctta 25900320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Original strand, 37053061 - 37053093
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
37053061 atgattatgataaagactaacccccttacctta 37053093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 159; Significance: 2e-84; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 130 - 467
Target Start/End: Complemental strand, 1219 - 882
Alignment:
130 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 229  Q
    |||||||||||||||||| ||| ||||||||||||| |||||||||  |||||||  |||| |||| | ||||||| ||| |||||||| | | ||||||    
1219 tcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataacataaattaacatccataacatcacttgaacaagaataaaatctcaat 1120  T
230 tcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacactta 328  Q
    | ||| ||||| | |  ||||||||| |||  |||||||||||| ||||| | |||| ||||||||| |||||| ||||| ||||||||||||||| |||    
1119 t-aacaacaacttagcaaaattcatcaattgagcacaattttcacaacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaatta 1021  T
329 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattcacaaa 428  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||   |||    
1020 tcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgtaaa 921  T
429 atgatgatgattatggtaaagactaacccccttacctta 467  Q
     ||| |||||||||| |||||||||||||||||||||||    
920 gtgaagatgattatgataaagactaacccccttacctta 882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 157; Significance: 3e-83; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 126 - 467
Target Start/End: Original strand, 12110 - 12450
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||||||||||||||| ||| ||||||||||||| |||||| ||  |||||||| |||| |||  | ||||||||||| |||||||||| | ||    
12110 attctcatcatcaatccatgaatatgcatacccaagcaattattcatgaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatct 12209  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    |||||  || ||||| |  |||| |||| | |||| |||||||||||| ||||| |||||| |||| ||||||||||| | ||| |||||||||||||||    
12210 caatt--acaacaacttaacaaaattcaccaatttagcacaattttcacaacttatcatttttacacatttaaacatgtattttcaccaacaatcataca 12307  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaa-ttcatacaacatttgaaaattc 423  Q
     |||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||| |||||||| ||||||||| ||     
12308 attatcatcaattcatgcatacaaacatatcatcacagttagagcacgaatttagcaacaattatccataatcaaaatttcatacagcatttgaaagtt- 12406  T
424 acaaaatgatgatgattatggtaaagactaacccccttacctta 467  Q
    ||||||| | |||||||||| |||||||||||||||||||||||    
12407 acaaaattaagatgattatgataaagactaacccccttacctta 12450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 154; Significance: 2e-81; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 126 - 467
Target Start/End: Original strand, 23153442 - 23153786
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||| | ||| |||||| ||||||||||||| |||||||||||||| | |||||| |||| || | | || |||||||| |||||||||||| ||    
23153442 attctcatccttaattcatgaatatgtatacccaagtaatgattcatcaaccacaacatcaattaacagccataatatcaattgaacaagaatcataact 23153541  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    ||||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||||| |||||||||||||||    
23153542 caatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcataca 23153641  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 422  Q
     |||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||| ||   |||||||||||||||||||||||||    
23153642 attatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagaaacaattatccattatgcaaaaattcatacaacatttgaaaatt 23153741  T
423 cacaaaatgatgatgattatggtaaagactaacccccttacctta 467  Q
     |||||||||||||||||||| | |||||||||||||||||||||    
23153742 tacaaaatgatgatgattatgatgaagactaacccccttacctta 23153786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 126 - 466
Target Start/End: Complemental strand, 14626386 - 14626045
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||| |||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||| || | | |||||||||||  ||||||||| | ||    
14626386 attctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaatct 14626287  T
226 caattcaactacaacatgtca-aattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    ||| | ||| ||||| |  || |||||| | |||   ||||||||||||||||| |||||| ||||||||| |||||| ||||| |||||||||||||||    
14626286 caagttaacaacaacttagcataattcaccaattgcacacaattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcataca 14626187  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattca 424  Q
     |||| ||||||||||||||||||||||| ||||| ||   ||||||||||||||||| ||| ||||||||||| |||||| ||||||||||| ||||      
14626186 attatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcaataattatccataatcacaattcaaacaacatttgagaatttg 14626087  T
425 caaaatgatgatgattatggtaaagactaacccccttacctt 466  Q
     ||| ||| ||||||| || |||  |||||||||||||||||    
14626086 taaagtgaagatgattgtgataataactaacccccttacctt 14626045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 126 - 393
Target Start/End: Complemental strand, 35009707 - 35009439
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || ||||||||||||||| ||| |  ||  | |     
35009707 attctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatca 35009608  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
     |||||||| |||||||  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||| ||||| |||||||||||||||    
35009607 taattcaacaacaacatagcaaaattcaccaattgagcacaattttcaaaacttcacatttttacataattgaacatgtaatttcaccaacaatcataca 35009508  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
     |||| |||||||||||||||||||| || ||||| |||| ||||||||||||||||||||| ||||||    
35009507 attatcatcaattcatgcatacaaacttaacatcacagttagagcacgaatttagcaacaattatccat 35009439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 142 - 393
Target Start/End: Complemental strand, 1657999 - 1657748
Alignment:
142 catgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 241  Q
    |||||| ||| ||||||||||| |||||||||||| | |||||| |||| || ||| |||||||| || |||||||||||| ||||||||| | | |||     
1657999 catgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataacatcaactgaacaagaatcataactcaattca-caataact 1657901  T
242 tgtcaaattc-atccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcat 340  Q
    |  |||| || ||| |||  ||||||||||||||||||| ||||| |||||| || ||||||  |||| ||||||||||||||| |||| ||||||||||    
1657900 tagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcat 1657801  T
341 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
    |||| |||||||| ||||| |||| ||||||||||||||||||||| ||||||    
1657800 gcatccaaacataacatcacagttagagcacgaatttagcaacaattatccat 1657748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 142 - 393
Target Start/End: Original strand, 15862484 - 15862734
Alignment:
142 catgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 241  Q
    |||||| ||| ||||||||||| |||||||||||| | |||||| |||| || ||| ||||| ||| | |||||||||||| ||||||||| | | |||     
15862484 catgaatatgcatacccaagcagtgattcatcaacaacaacatcaattatcagcaataacataaat-gaacaagaatcataactcaattca-caataact 15862581  T
242 tgtcaaattc-atccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcat 340  Q
    |  |||| || ||| |||  ||||||||||||||||||| ||||| |||||| || ||||||  |||| ||||||||||||||| |||| ||||||||||    
15862582 tagcaaaatccatcaattgagcacaattttcataacttcacatttatacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcat 15862681  T
341 gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
    ||||||||||||| ||||| |||| |||||||||||||| |||||| ||||||    
15862682 gcatacaaacataacatcacagttagagcacgaatttagtaacaattatccat 15862734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 126 - 468
Target Start/End: Complemental strand, 1650361 - 1650020
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||| |||||| |||||| ||| ||||||||||| |||||||||||| | |||||| | || || ||| |||||||||||  ||||||||| | ||    
1650361 attctcataatcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatct 1650262  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    ||| | ||| | ||| |  |||| |||| | |||  |||||||||||| ||||| |||||  ||||||||| |||||| ||||| |||||||||||||||    
1650261 caaattaaccataacttagcaaaattcaccaattgagcacaattttcacaacttatcattcttacatatttgaacatgtaatttcaccaacaatcataca 1650162  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaattc 423  Q
     |||| |||||||||||||||||||| || ||||| |||  |||||||||| |||||  |||  | ||| || | |  ||||||||||||  ||||||      
1650161 attatcatcaattcatgcatacaaacgtaacatcacagtaagagcacgaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaat-- 1650064  T
424 acaaaatgatgatgattatggtaaagactaacccccttaccttaa 468  Q
     |||||| |  ||||||||| ||||||||||||||||||||||||    
1650063 gcaaaatta-catgattatgataaagactaacccccttaccttaa 1650020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 126 - 381
Target Start/End: Original strand, 25175558 - 25175815
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||||||||||||||| ||| ||||||||||||| |||||||||  |||| ||| | || |||  | ||||||| ||| |||||||||| | ||    
25175558 attctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaact 25175657  T
226 caattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatac 323  Q
    ||| | ||| ||||| |  |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||||| ||||||||| ||||    
25175658 caaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatac 25175757  T
324 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 381  Q
    |  ||  ||||||||||||||||||||||| || || ||   ||||||||||||||||    
25175758 aactaacatcaattcatgcatacaaacataacaacacagcaagagcacgaatttagca 25175815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 126 - 381
Target Start/End: Complemental strand, 27654240 - 27653983
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||||| |||||||||| ||| ||||||||||||| |||||||||  |||| ||| | || |||  | ||||||| | | |||||||||| | ||    
27654240 attctcatcattaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcattggaacaagaatcacaact 27654141  T
226 caattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatac 323  Q
    ||| | ||| ||||| |  |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||||| ||||||||| ||||    
27654140 caaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatac 27654041  T
324 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 381  Q
    |  ||  |||||||||||||||||| |||| ||||| ||   ||||||||||||||||    
27654040 aactaacatcaattcatgcatacaagcataacatcacagcaagagcacgaatttagca 27653983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 398 - 467
Target Start/End: Original strand, 23148266 - 23148335
Alignment:
398 aaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctta 467  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||    
23148266 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaacccccttacctta 23148335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 435 - 507
Target Start/End: Complemental strand, 19983224 - 19983152
Alignment:
435 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
19983224 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 19983152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 435 - 507
Target Start/End: Complemental strand, 35015089 - 35015017
Alignment:
435 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
35015089 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 35015017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 126 - 381
Target Start/End: Complemental strand, 16826011 - 16825752
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||||||||||||||| ||| ||| | ||||||| |||||||||  |||| |||   || |||  | ||||||| ||| |||||||||| | ||    
16826011 attctcatcatcaatccatgaatatgcataacaaagcaattattcatcaatcataatatcagataacattcataacatcatttgaacaagaatcacaact 16825912  T
226 caattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatca--t 321  Q
    ||| | ||| ||||  |  |  |||| || | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||||| ||||||||| |  |    
16825911 caaattaacaacaaattaggagaaatccaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattaatt 16825812  T
322 acacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 381  Q
    |||  ||  ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
16825811 acaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 16825752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 310 - 393
Target Start/End: Original strand, 27751605 - 27751688
Alignment:
310 accaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
    ||||||||||||||| || | ||||||||||||||||||||||| ||||| | || ||||||||||||||| ||| | ||||||    
27751605 accaacaatcatacaattgtcatcaattcatgcatacaaacataacatcacaattagagcacgaatttagctacatttatccat 27751688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 195 - 393
Target Start/End: Original strand, 29665937 - 29666137
Alignment:
195 caacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatat 293  Q
    ||||||||||||||| ||| |||||||| |||| |||||| ||||| |  |||| |||| | |||  | ||||||| ||||||||  ||||| | ||||     
29665937 caacaacatcaattgaacatgaatcatatctcatttcaacaacaacttagcaaaattcaccaattgagtacaattt-cataacttgacatttatgcatac 29666035  T
294 tt--aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcc 391  Q
    ||  ||||||| ||||| ||| ||||||||||| |||| |||||||||| ||||  || ||| ||||| || | ||||||||||||| ||||||| ||||    
29666036 tttgaaacatgtaatttcacccacaatcatacaattatcatcaattcatacataagaaaataacatcacagctagagcacgaatttaacaacaattatcc 29666135  T
392 at 393  Q
    ||    
29666136 at 29666137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 435 - 507
Target Start/End: Original strand, 18583640 - 18583712
Alignment:
435 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||| | || |||||||||||||||||||||||| ||||||| || ||| ||||||||||| ||||||    
18583640 atgattatgatgaaaactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcct 18583712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 451 - 507
Target Start/End: Original strand, 21623506 - 21623562
Alignment:
451 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||||||||||||||||| |||| | ||||| | ||||||||||||||||||    
21623506 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctcct 21623562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 241
Target Start/End: Complemental strand, 18381909 - 18381821
Alignment:
153 atacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 241  Q
    |||||||||| |||| |||||||| | ||||||  |||||| ||||||||||||||| ||| || || || | ||||||||| ||||||    
18381909 atacccaagccatgaatcatcaacaacaacatcacttagcaacaacaacatcaattgaacatgactcttatcacaattcaacaacaaca 18381821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 451 - 507
Target Start/End: Complemental strand, 22361676 - 22361620
Alignment:
451 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||||||||||||||||| |||| | ||||  | ||||||||||||||||||    
22361676 ctaacccccttaccttaattatcaccaattcctaggccaagcttcactttagctcct 22361620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 234
Target Start/End: Original strand, 27740837 - 27740941
Alignment:
130 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 229  Q
    ||||||||||| |||||| ||| |||||||| | |||||||||| || | ||||||   ||  | |||| |||||||||| ||| |||||||| ||||||    
27740837 tcatcatcaattcatgaatatgcatacccaaaccatgattcatccacaacaacatcagataatagcaaccacatcaattgaacatgaatcatatctcaat 27740936  T
230 tcaac 234  Q
    |||||    
27740937 tcaac 27740941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 377
Target Start/End: Complemental strand, 16887833 - 16887792
Alignment:
336 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 377  Q
    ||||||||||||||||||| |||| |||| ||||||||||||    
16887833 ttcatgcatacaaacatattatcatagttagagcacgaattt 16887792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 377
Target Start/End: Complemental strand, 18629689 - 18629608
Alignment:
297 aacatggaatttaaccaacaatcatacacttattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 377  Q
    |||||| ||||| ||||||||  || || |||| ||||||| ||||||| |||||||||||||| | || ||||||||||||    
18629689 aacatgcaatttcaccaacaacaattcaattatcatcaatttcatgcattcaaacatatcatcataattagagcacgaattt 18629608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 218
Target Start/End: Complemental strand, 22362019 - 22361926
Alignment:
126 attctcatcatcaatccatgaac-atgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaat 218  Q
    ||||||||||||||| ||||||  ||| | |||||||| |||| |||||||| | || |||  |||||| ||||||||||||||| ||| ||||    
22362019 attctcatcatcaattcatgaattatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaat 22361926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 377
Target Start/End: Original strand, 33324898 - 33324939
Alignment:
336 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 377  Q
    |||||||||||||||||||||||  |||| ||||||||||||    
33324898 ttcatgcatacaaacatatcatcctagttagagcacgaattt 33324939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 377
Target Start/End: Complemental strand, 35136054 - 35136013
Alignment:
336 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 377  Q
    |||||||||||||||||||||||  |||| ||||||||||||    
35136054 ttcatgcatacaaacatatcatcctagttagagcacgaattt 35136013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Complemental strand, 18002427 - 18002395
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
18002427 atgattatgataaagactaacccccttacctta 18002395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Original strand, 23995247 - 23995279
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
23995247 atgattatgataaagactaacccccttacctta 23995279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 242
Target Start/End: Complemental strand, 25367490 - 25367374
Alignment:
127 ttctcatcatcaatccatgaa-catgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||| |||| |||||| |||| | |||||||| |||| | ||| |  | ||||||  |||||| ||||||||||||||| ||| ||||| || |     
25367490 ttctcatcaacaattcatgaatcatgcacacccaagccatgaattatcgataacaacatcacttagcaacaacaacatcaattgaacatgaatcttatca 25367391  T
226 caattcaactacaacat 242  Q
    ||||||||| |||||||    
25367390 caattcaacaacaacat 25367374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Original strand, 26090059 - 26090091
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
26090059 atgattatgataaagactaacccccttacctta 26090091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 151; Significance: 1e-79; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 130 - 467
Target Start/End: Complemental strand, 6327 - 5990
Alignment:
130 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 229  Q
    |||||||||||||||||| ||| ||||||||||||| |||||||||  ||||||   |||| |||| | ||||||| ||| |||||||||| | ||||||    
6327 tcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataacaaaaattaacatccataacatcacttgaacaagaatcaaatctcaat 6228  T
230 tcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacactta 328  Q
    | ||| ||||| |  |||| |||| | |||  |||||||||| | ||||| | |||| ||||||||| |||||| ||||| ||||||||||||||| |||    
6227 t-aacaacaacttagcaaaattcaccaattcagcacaatttttacaacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaatta 6129  T
329 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattcacaaa 428  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||  ||||    
6128 tcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgcaaa 6029  T
429 atgatgatgattatggtaaagactaacccccttacctta 467  Q
     |||  ||||||||| |||||||||||||||||||||||    
6028 gtgaaaatgattatgataaagactaacccccttacctta 5990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 151; Significance: 1e-79; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 126 - 467
Target Start/End: Original strand, 41724 - 42066
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||| || |||||| |||||| ||| |||||||| ||||||||||||| ||| |||| | |||| || | | | ||||||||| |||||||||||| ||    
41724 attctaataatcaattcatgaatatgcatacccaaccaatgattcatcatctacaacaacaattaacagccatagcatcaattgaacaagaatcataact 41823  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    ||||  ||| ||||| |  |||| |||| | |||  |||||||||||| || || |||||| ||||||||| | |||| ||||| |||||||||   |||    
41824 caatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaaattatcatttttacatatttgagcatgtaatttcaccaacaatatgaca 41923  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattca 424  Q
     |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |    
41924 attatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaattta 42023  T
425 caaaatgatgatgattatggtaaagactaacccccttacctta 467  Q
    ||||||||||||||||||| ||||||| |||||||||||||||    
42024 caaaatgatgatgattatgataaagaccaacccccttacctta 42066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 146; Significance: 1e-76; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 126 - 467
Target Start/End: Complemental strand, 247710 - 247366
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||| ||| | |||||| ||| |||||||||||||||||||||||| | |||||| |||| ||   | ||||||||||| |||||||||||| ||    
247710 attctcatcctcagttcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagtcataacatcaattgaacaagaatcataact 247611  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    ||||  ||| ||||| |  |||| || | | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||||| |||  ||||||||||    
247610 caatctaacaacaacttagcaaaatttaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgaaatttcaccctcaatcataca 247511  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 422  Q
     |||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||    
247510 attatcatcaattcatgcatacaaacatatcattacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatt 247411  T
423 cacaaaatgatgatgattatggtaaagactaacccccttacctta 467  Q
     |||||||||||||||||||| |||||||||||||||||||||||    
247410 tacaaaatgatgatgattatgataaagactaacccccttacctta 247366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 144; Significance: 2e-75; HSPs: 3)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 126 - 467
Target Start/End: Complemental strand, 26683 - 26340
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||| ||||| ||| || ||| |||||||||||||||||||||||  | |||||| |||| || | | ||||||||||| |||||||||||| ||    
26683 attctcatcctcaattcatcaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacagccataacatcaattgaacaagaatcataact 26584  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    || |  ||| ||||| |  |||| |||| | |||  | |||||||||| ||||| |||||| ||||||||| |||||| | ||| ||||| |||| ||||    
26583 cattctaacaacaacttagcaaaattcaccaattgagaacaattttcacaacttatcatttttacatatttgaacatgtactttcaccaataatcttaca 26484  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat-caaaattcatacaacatttgaaaattc 423  Q
     |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||| ||  |||||||||||||||||||||||||     
26483 attatcatcaattcacgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatacattatgaaaaattcatacaacatttgaaaattt 26384  T
424 acaaaatgatgatgattatggtaaagactaacccccttacctta 467  Q
    |||||||||| ||||||||| |||||||||||||||||||||||    
26383 acaaaatgatcatgattatgataaagactaacccccttacctta 26340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 126 - 393
Target Start/End: Complemental strand, 8445 - 8180
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||||||||| |||| | ||| |||||||||| ||||||||| ||| | |||||| |||| || ||||||||||||||| ||| |  ||  | |     
8445 attctcatcatcaattcatgtatatgcatacccaagccatgattcataaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatca 8346  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
     ||||||||   |||||  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || ||| || ||||| |||||||||||||||    
8345 taattcaac---aacatagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacctgtaatttcaccaacaatcataca 8249  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
     |||| | ||||||||||||||||||||| ||||| |||| ||||||||||||||||||||| ||||||    
8248 attatcaccaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattatccat 8180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 451 - 507
Target Start/End: Complemental strand, 6934 - 6878
Alignment:
451 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||| |||||    
6934 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttaactcct 6878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 144; Significance: 2e-75; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 137 - 467
Target Start/End: Original strand, 272031 - 272362
Alignment:
137 caatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaacta 236  Q
    |||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || | | |||| |||||| |||||||||||| |||||| |||| |    
272031 caattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagctataacaccaattgaacaagaatcataactcaatccaacca 272130  T
237 caacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacacttattatcaa 335  Q
    |||| |  |||| |||| | |||| |||||||||||| ||||| |||||| | | ||||| |||||| |||||  ||| |||||||||| |||| |||||    
272131 caacttagcaaaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttctccatcaatcatacaattatcatcaa 272230  T
336 ttcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattcacaaaatgatga 435  Q
    ||||| |||||||||||||||| | |||||||| ||| ||||||||| | | |||||||||||||||| |||||| ||||||||||| ||||||||||||    
272231 ttcattcatacaaacatatcattacagttggagtacgtatttagcaatatttatccataatcaaaatttatacaatatttgaaaatttacaaaatgatga 272330  T
436 tgattatggtaaagactaacccccttacctta 467  Q
    |||||||| |||||||||||||||||||||||    
272331 tgattatgataaagactaacccccttacctta 272362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 143; Significance: 7e-75; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 126 - 467
Target Start/End: Complemental strand, 128436 - 128095
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||||||||| |||||| ||| |||||||| |||| |||||||||  | |||||| |||| |||| | ||||||||||| |||||||||| | ||    
128436 attctcatcatcaattcatgaatatgcatacccaatcaattattcatcaatcacaacatccattaacatccataacatcaattgaacaagaatcaaatct 128337  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    ||||| ||| ||||| |  |||| |||  | |||  |||||||||||| |||||  ||  | |||| |||| |||||| ||||| |||||||||| ||||    
128336 caatt-aacaacaacctaacaaaattcgccaattgagcacaattttcacaacttaacacctttacacatttgaacatgtaatttcaccaacaatcttaca 128238  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattca 424  Q
     |||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||      
128237 attatcatcaattcatgcatacaaacatatcatcacagttgaagcacgaatttagcaacaattatccataagcaaaattcatacaacttttgaaaatttg 128138  T
425 caaaatgatgatgattatggtaaagactaacccccttacctta 467  Q
    |||||||| |||||||||| |||||||||||||||||||||||    
128137 caaaatgaagatgattatgataaagactaacccccttacctta 128095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 126 - 359
Target Start/End: Complemental strand, 31933 - 31697
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||||| |||||||||| ||| | ||||||||||| |||||||||  |||| ||  | || |||  | ||||||||||| ||| |||||| | ||    
31933 attctcatcattaatccatgaatatgcaaacccaagcaattattcatcaatcataatattaaataacattcataacatcaattgaacatgaatcacatct 31834  T
226 caattcaactacaacat---gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcata 322  Q
    ||| ||||| ||||| |   |  ||||||| | |||  ||| ||| |||||||||| |||||| | ||||| | || ||| ||||| |||||||||||||    
31833 caaatcaacaacaactttaggagaaattcaccaattgagcataatattcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcata 31734  T
323 cacttattatcaattcatgcatacaaacatatcatca 359  Q
    ||  ||  |||||||||||||| |||||||| |||||    
31733 caactaacatcaattcatgcattcaaacataacatca 31697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 139; Significance: 2e-72; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 126 - 467
Target Start/End: Original strand, 8873 - 9215
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||||||||| |||||| ||| ||||||||||||| |||||||||  | |||||| |||| |||| | ||||||||||| |||||||||| | ||    
8873 attctcatcatcaatacatgaatatgcatacccaagcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatct 8972  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    ||| | ||| ||||| |  |||| |||| | |||  |||||||||||| |||||  ||||| |||||| || |||||| ||||| |||||||||| ||||    
8973 caaattaacaacaacttaacaaaattcaccaattgagcacaattttcacaacttaacatttttacataattgaacatgtaatttcaccaacaatcttaca 9072  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattca 424  Q
     |||| ||| ||||||||||||||||||| ||||| |  |||||||||||||||||||||||  ||||||| |||||||| |||||| ||||||||||      
9073 attatcatcgattcatgcatacaaacataacatcacaaatggagcacgaatttagcaacaattttccataagcaaaattcgtacaacttttgaaaatttg 9172  T
425 caaaatgatgatgattatggtaaagactaacccccttacctta 467  Q
    |||||||| |||||||||| |||||||||||||||||||||||    
9173 caaaatgaagatgattatgataaagactaacccccttacctta 9215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 139; Significance: 2e-72; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 126 - 467
Target Start/End: Complemental strand, 123432 - 123087
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||| ||||| |||||| ||| |||||||||| || |||||||||| | |||||| |||| || | | ||||||||||| |||||||||||| ||    
123432 attctcatcttcaattcatgaatatgcatacccaagccattattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcataact 123333  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
     |||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | ||||| |||||| ||||| |||||||||||||||    
123332 taatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcataca 123233  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 422  Q
     |||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||   ||||||||||||||||||| |||||    
123232 attatcatcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgcaaatt 123133  T
423 cac-aaaatgatgatgattatggtaaagactaacccccttacctta 467  Q
     || ||||| |||||||||||||| |||||||||||||||||||||    
123132 tacaaaaattatgatgattatggtgaagactaacccccttacctta 123087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 138; Significance: 6e-72; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 126 - 457
Target Start/End: Complemental strand, 5329 - 4996
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||| ||||| |||||| ||| |||||||||||||||||||||||  | |||||| |||| || | | ||||||||||| |||||||||||| ||    
5329 attctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacagccataacatcaattgaacaagaatcataact 5230  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    || |  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| | ||| |||||||||| ||||    
5229 cattctaacaacaactttgcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtactttcaccaacaatcttaca 5130  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat-caaaattcatacaacatttgaaaattc 423  Q
     |||| ||||||||| ||||||||||||||| ||| |||||||| ||||||||||||||||| |||||| ||  |||||||||||||||||||||||||     
5129 attatcatcaattcacgcatacaaacatatcgtcacagttggagtacgaatttagcaacaattatccattatgaaaaattcatacaacatttgaaaattt 5030  T
424 acaaaatgatgatgattatggtaaagactaaccc 457  Q
    |||||||||| ||||||||| |||||||||||||    
5029 acaaaatgataatgattatgataaagactaaccc 4996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 135; Significance: 4e-70; HSPs: 6)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 227 - 393
Target Start/End: Original strand, 26892 - 27058
Alignment:
227 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 326  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||| ||||||| ||||||||||||||||||||| |    
26892 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 26991  T
327 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
26992 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 27058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 227 - 386
Target Start/End: Original strand, 22637 - 22796
Alignment:
227 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 326  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||| ||||||| ||||||||||||||||||||| |    
22637 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 22736  T
327 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 386  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
22737 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 22796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 22579 - 22639
Alignment:
1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactccatcataat 61  Q
    |||||||  ||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
22579 atgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataat 22639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 26834 - 26894
Alignment:
1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactccatcataat 61  Q
    |||||||  ||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
26834 atgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataat 26894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Original strand, 22857 - 22889
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
22857 atgattatgataaagactaacccccttacctta 22889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Original strand, 27112 - 27144
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
27112 atgattatgataaagactaacccccttacctta 27144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 135; Significance: 4e-70; HSPs: 3)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 227 - 393
Target Start/End: Complemental strand, 1748 - 1582
Alignment:
227 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 326  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||| ||||||| ||||||||||||||||||||| |    
1748 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 1649  T
327 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
1648 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 1582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 1806 - 1746
Alignment:
1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactccatcataat 61  Q
    |||||||  ||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
1806 atgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataat 1746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Complemental strand, 1528 - 1496
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
1528 atgattatgataaagactaacccccttacctta 1496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 133; Significance: 6e-69; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 261 - 465
Target Start/End: Complemental strand, 51314 - 51110
Alignment:
261 gcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 360  Q
    |||||||||||| ||||| |||||| ||| ||||| |||||| ||||| |||||||||| |||| |||| ||||||||||||||||||| |||||||||     
51314 gcacaattttcacaacttatcatttttacctatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaatatatcatcac 51215  T
361 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaaccccct 460  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| | |||    
51214 agttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaatctcct 51115  T
461 tacct 465  Q
    |||||    
51114 tacct 51110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 129; Significance: 2e-66; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 130 - 467
Target Start/End: Original strand, 8848 - 9192
Alignment:
130 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 229  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||| | |||||| ||||  | ||| ||||||||||| |||  ||||||| ||||||    
8848 tcatcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaatagcaataacatcaattgaacattaatcatatctcaat 8947  T
230 tcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacactta 328  Q
    ||||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||| ||||| ||||||||||||||| |||    
8948 tcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaatta 9047  T
329 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaattcaca 426  Q
    | ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||  ||   ||||| ||||| ||||||||||| |  ||    
9048 tcatcaattcatgcatacaaacatatcatcacagatggagcacgaatttagcaacaattatccaattatgaaaaatacataccacatttgaaaaattgca 9147  T
427 aa----atgatgatgattatggtaaagactaacccccttacctta 467  Q
    ||    ||||||||||||||| | ||||||||| | |||||||||    
9148 aaaatgatgatgatgattatgatgaagactaacacacttacctta 9192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 126 - 425
Target Start/End: Original strand, 148716 - 149018
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||||||||| |||||| ||  |||||||||||||||||||||||| | ||| || |||| || | | ||||||||||| |||||||||| | ||    
148716 attctcatcatcaattcatgaatatacatacccaagcaatgattcatcaaccacaacttcaattaacaaccataacatcaattgaacaagaatcaaatct 148815  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    ||| | ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| |||||| ||||| |||||||||| ||||    
148816 caaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttaca 148915  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 422  Q
     |||| ||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||| ||| || ||   |||||||||||||||||||||| ||    
148916 attatcatcaattcatgcatacaaacatatcatcacagttggagcacaaatttaacaacaattatcaattatgcaaaaattcatacaacatttgaaattt 149015  T
423 cac 425  Q
    |||    
149016 cac 149018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 367 - 467
Target Start/End: Original strand, 146838 - 146938
Alignment:
367 agcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctt 466  Q
    |||| |||||||| |||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
146838 agcatgaatttaggaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctt 146937  T
467 a 467  Q
    |    
146938 a 146938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 114; Significance: 1e-57; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 126 - 386
Target Start/End: Original strand, 48182 - 48443
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||||||||||||||| ||| ||||||| ||||| |||||||||  | |||||| |||| |||| | ||||||||||| |||||||||| | ||    
48182 attctcatcatcaatccatgaatatgcatacccaggcaattattcatcaatcacaacatcaattaacatctataacatcaattgaacaagaatcaaatct 48281  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    ||| | ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| |||| |||| |||||| ||||| |||||||||||||||    
48282 caaattaacaacaacttaacaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcataca 48381  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 386  Q
     |||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
48382 attatcatcaattcatgcatacaaacatatcattacagttggagcacgaatttagcaacaat 48443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 436 - 507
Target Start/End: Original strand, 20493 - 20564
Alignment:
436 tgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    |||||||| | || |||||||||||||||||||||||| ||||||| || ||| ||||||| ||| ||||||    
20493 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcatttttgctcct 20564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 114; Significance: 1e-57; HSPs: 4)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 261 - 467
Target Start/End: Complemental strand, 89586 - 89378
Alignment:
261 gcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 360  Q
    |||||||||||| ||||| | |||| | | ||||| |||||| ||||| ||||||||||||||| |||| ||||||||||||||||||| |||||||||     
89586 gcacaattttcacaacttataatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaatatatcatcac 89487  T
361 agttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccc 458  Q
    |||||||||||||||||||||||||| |||||| ||   |||||||||| |||||||||||||| |||||||||||||||| ||| | ||||||||||||    
89486 agttggagcacgaatttagcaacaattatccattatgcaaaaattcatagaacatttgaaaatttacaaaatgatgatgatcatgatgaagactaacccc 89387  T
459 cttacctta 467  Q
    |||||||||    
89386 cttacctta 89378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 342 - 467
Target Start/End: Complemental strand, 107835 - 107708
Alignment:
342 catacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaattcacaaaatgatgatgat 439  Q
    |||||||| ||||||||| |||||||||||||||||||||| ||| |||||| ||   ||||||||||||||||||||||||| ||||||||||||||||    
107835 catacaaatatatcatcacagttggagcacgaatttagcaaaaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 107736  T
440 tatggtaaagactaacccccttacctta 467  Q
     ||| | |||||||||||||||||||||    
107735 catgatgaagactaacccccttacctta 107708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 209
Target Start/End: Original strand, 79533 - 79616
Alignment:
127 ttctcatcatcaatccatgaac-atgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattg 209  Q
    ||||||||| |||| ||||||  ||| |||||||||| |||| |||||||| |||| |||  |||||| |||||||||||||||    
79533 ttctcatcaccaattcatgaattatgaatacccaagccatgaatcatcaacaataatatcacttagcaacaacaacatcaattg 79616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 377
Target Start/End: Original strand, 79745 - 79786
Alignment:
336 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 377  Q
    |||||||||||||||||||||||| |||| | ||||||||||    
79745 ttcatgcatacaaacatatcatcatagttagtgcacgaattt 79786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 109; Significance: 1e-54; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 126 - 393
Target Start/End: Original strand, 13501 - 13769
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||| ||||| |||||| ||| |||||||||  ||||||||||||| | |||||| |||| || ||||||||||||||| ||| |  ||  | |     
13501 attctcatcgtcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatca 13600  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
     |||||||| |||||||  |||| |||||| |||  |||||||||||| |||||| ||||| |||||| || |||||| ||||| |||||||||||||||    
13601 taattcaacaacaacatagcaaaattcatcaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcataca 13700  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
     |||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||    
13701 attatcatcaattcatgcatacaaacataacatcaaagttagagcacgaatttagcaacaattatccat 13769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 435 - 507
Target Start/End: Original strand, 42677 - 42746
Alignment:
435 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||| |||| |||||||||||||||||   |||||||||||| |||||||||||||||||| ||||||    
42677 atgattatgataaaaactaacccccttacctt---tatctccaactattagctctagcttcacttttgctcct 42746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 102; Significance: 2e-50; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 130 - 386
Target Start/End: Original strand, 107746 - 108003
Alignment:
130 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 229  Q
    |||||||||||||||||| ||| | ||||||||||| |||||||||  | |||||| |||| |||| | ||||||||||| |||||||||| | |||||     
107746 tcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaa 107845  T
230 tcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacactta 328  Q
    | ||| ||||| | ||||| |||| | |||  |||||||||| | ||||| |||||| | || |||| |||||| ||||| ||||||||||||||| |||    
107846 ttaacaacaacttatcaaaattcaccaattgagcacaatttttacaacttatcatttttgcacatttgaacatgtaatttcaccaacaatcatacaatta 107945  T
329 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 386  Q
    | ||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||    
107946 tcatcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaat 108003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 126 - 377
Target Start/End: Complemental strand, 64785 - 64527
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||| ||||||||||| ||| | ||||||||||| |||||| ||  |||| ||| | || |||  | ||||||| ||| ||||| |||| | ||    
64785 attctcatcaacaatccatgaatatgcaaacccaagcaattattcattaatcataatatcaaataacattcataacatcatttgaacaagcatcacatct 64686  T
226 caattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatac 323  Q
    ||| | ||| ||||| |  |  ||||||| | |||  ||||||| |||||||||| |||||| |||||||||||||||| ||||| ||||||||||||||    
64685 caaattaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatac 64586  T
324 acttattatc-----aattcatgcatacaaacatatcatcaaagttggagcacgaattt 377  Q
    | | || |||     |||||||||||| ||||||| ||||| ||   ||||||||||||    
64585 aatcatcatcaatataattcatgcatataaacataacatcacagcaagagcacgaattt 64527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 336 - 378
Target Start/End: Complemental strand, 89905 - 89863
Alignment:
336 ttcatgcatacaaacatatcatcaaagttggagcacgaattta 378  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
89905 ttcatgcatacaaacatatcatcatagttggagcacgaattta 89863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 101; Significance: 8e-50; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 126 - 393
Target Start/End: Original strand, 41643 - 41911
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||||||||| |||||| ||| |||||||||||||||||||||||| | ||||||  ||| || ||||||||||||||| ||| |  ||  | |     
41643 attctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcatttaacaacaacaacatcaattgaacatggttctcatca 41742  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
     |||||||| |||||||  |||| |||| | |||   ||||||||||| |||||| ||||| |||||| || |||||| ||||| |||||||||||||||    
41743 taattcaacaacaacatagcaaaattcaccaattgaacacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcataca 41842  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
     |||| ||||||||||||||||||||||| ||||| |||| ||||||||||||| ||||||| ||||||    
41843 attatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttaacaacaattatccat 41911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 126 - 393
Target Start/End: Complemental strand, 802 - 534
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||| ||||| | |||| ||| |||||||||||||||||||||||| | |||||| ||||||| | | ||||||||||  |||||||||||| ||    
802 attctcatcctcaattcctgaatatgcatacccaagcaatgattcatcaaccacaacatcaattagcagccataacatcaattaaacaagaatcataact 703  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
     |||  |||   ||| |  |||| |||| | |||  | |||||||||| ||||  |||||| | | ||||| |||||| ||||| |||||||||||||||    
702 taatctaacagtaacttagcaaaattcaccaattgagtacaattttcacaactcatcatttgttcctatttgaacatgtaatttcaccaacaatcataca 603  T
325 cttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
     |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
602 attatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccat 534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 130 - 393
Target Start/End: Complemental strand, 34725 - 34460
Alignment:
130 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgca-caagaatcatagctcaa 228  Q
    |||||||||||||||||| ||| ||||||||| | |||||||||||| | |||||| | || || ||| ||||||||||  | || |||||||| |||||    
34725 tcatcatcaatccatgaatatgcatacccaagtagtgattcatcaacaacaacatcaaataacaacaataacatcaattaaaacatgaatcatatctcaa 34626  T
229 ttcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacactt 327  Q
    |||||| ||||| |  |||| |||| | |||  | |||||||||| ||||||  |||| |||| | || |||||| ||||| ||||||||||||||| ||    
34625 ttcaacaacaacttagcaaaattcacctattgagaacaattttcacaacttcatatttttacacaattgaacatgtaatttcaccaacaatcatacaatt 34526  T
328 attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
    || ||||||||||||||||||||||| ||||| |||| ||||||||||||||||| ||| ||||||    
34525 atcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaataattatccat 34460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 86; Significance: 7e-41; HSPs: 2)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 261 - 386
Target Start/End: Original strand, 5660 - 5785
Alignment:
261 gcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 360  Q
    ||||||| ||||| |||| |||||| |||||||||||||||| ||||| ||||||||||||||| | || ||||||||||||||||||||||| ||||||    
5660 gcacaatattcatgacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcaa 5759  T
361 agttggagcacgaatttagcaacaat 386  Q
    ||||||||||||||||||||||||||    
5760 agttggagcacgaatttagcaacaat 5785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 435 - 467
Target Start/End: Original strand, 5846 - 5878
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    |||||||||||||||||||||||||||||||||    
5846 atgattatggtaaagactaacccccttacctta 5878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 83; Significance: 4e-39; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 126 - 382
Target Start/End: Original strand, 2957 - 3215
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgca-caagaatcatagc 224  Q
    |||||||| |||||| |||||| ||| |||| |||||| |||||||||||| | |||||| | || || ||| ||||||||||  | || |||||||| |    
2957 attctcataatcaattcatgaatatgcatacacaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattaaaacatgaatcatatc 3056  T
225 tcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatac 323  Q
    |||||||||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || |||||| ||||| ||||||||||||||    
3057 tcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatac 3156  T
324 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaa 382  Q
    | |||| ||||||||||| ||||||||||| ||||| ||   |||||||||||||||||    
3157 aattatcatcaattcatggatacaaacataacatcacagcaagagcacgaatttagcaa 3215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 83; Significance: 4e-39; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 126 - 359
Target Start/End: Complemental strand, 9605 - 9371
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||| |||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||| || | | ||||||| |||  ||||||||| | ||    
9605 attctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcatttgagcaagaatcaaatct 9506  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    ||| | ||| | ||| |  |||| |||| | |||  |||| ||||||| ||||| |||||| ||||||||| |||||| ||||| |||||||||||||||    
9505 caaattaacaataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcataca 9406  T
325 cttattatcaattcatgcatacaaacatatcatca 359  Q
     |||| ||||||||||||||||||||||| |||||    
9405 attatcatcaattcatgcatacaaacataacatca 9371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 126 - 359
Target Start/End: Complemental strand, 16503 - 16269
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||| |||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||| || | | ||||||| |||  ||||||||| | ||    
16503 attctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcatttgagcaagaatcaaatct 16404  T
226 caattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcataca 324  Q
    ||| | ||| | ||| |  |||| |||| | |||  |||| ||||||| ||||| |||||| ||||||||| |||||| ||||| |||||||||||||||    
16403 caaattaacaataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcataca 16304  T
325 cttattatcaattcatgcatacaaacatatcatca 359  Q
     |||| ||||||||||||||||||||||| |||||    
16303 attatcatcaattcatgcatacaaacataacatca 16269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 126 - 358
Target Start/End: Original strand, 42992 - 43226
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||||||||||||||| ||| | ||||||||||| |||||||||  |||| ||| | || |||  | ||||||| ||| ||| |||||| | ||    
42992 attctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcacttgaacacgaatcacatct 43091  T
226 caattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatac 323  Q
    ||| | ||| ||||| |  |  ||||||| | |||| ||||||| ||||||||||  ||||| ||||||||| |||||| ||||| ||||||||||||||    
43092 caaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcatac 43191  T
324 acttattatcaattcatgcatacaaacatatcatc 358  Q
    | |||| ||||||||||||||| ||||||| ||||    
43192 aattatcatcaattcatgcatagaaacataacatc 43226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 64; Significance: 9e-28; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 130 - 343
Target Start/End: Original strand, 3721 - 3936
Alignment:
130 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 229  Q
    |||||||||||||||||| ||| | ||||||| ||| |||||||||  |||||||| |||| |||  | ||||||||||| |||||||||| | |||||     
3721 tcatcatcaatccatgaatatgcaaacccaagtaattattcatcaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctcaaa 3820  T
230 tcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttct-acatatttaaacatggaatttaaccaacaatcatacactt 327  Q
    | ||| ||||| |  |||| |||| | |||   |||||||| |||||||| |||||| | |||||||| |||||| ||||| ||||||||||||||| ||    
3821 ttaacaacaacttagcaaaattcaccaattggacacaatttccataacttatcattttttacatatttgaacatgtaatttcaccaacaatcatacaatt 3920  T
328 attatcaattcatgca 343  Q
    || |||||||||||||    
3921 atcatcaattcatgca 3936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 63; Significance: 4e-27; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 126 - 377
Target Start/End: Original strand, 30 - 283
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    |||||||||| |||| |||||| ||| | ||||||||||| |||||| ||  |||| ||| | || |||  | ||||||| ||| ||||| |||| | ||    
30 attctcatcaacaattcatgaatatgcaaacccaagcaattattcattaatcataatatcaaataacattcataacatcatttgaacaagcatcacatct 129  T
226 caattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatac 323  Q
    ||| | ||| ||||| |  |  ||||||| | |||  ||||||| | |||||||| |||||| |||||||||||||||| ||||| ||||||||||||||    
130 caaattaacaacaacttaggagaaattcaccaattgagcacaatatacataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatac 229  T
324 acttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 377  Q
    | | || ||||||||||||||||||||||| ||||| ||   ||||||||||||    
230 aatcatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 500
Target Start/End: Original strand, 30417 - 30482
Alignment:
435 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 500  Q
    ||||||||| | || | |||||||||||||||||||||| |||| || || ||| |||||||||||    
30417 atgattatgatgaaaaataacccccttaccttaattatcaccaattattaactcaagcttcacttt 30482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 63; Significance: 4e-27; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 130 - 343
Target Start/End: Complemental strand, 5467 - 5254
Alignment:
130 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 229  Q
    |||||||||||||||||| ||| | ||||||||||| |||||| ||  | |||||| |||| |||  | ||||||||||| |||||||||| | |||||     
5467 tcatcatcaatccatgaatatgca-acccaagcaattattcattaatcacaacatcaattaacattcataacatcaattgaacaagaatcaaatctcaaa 5369  T
230 tcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacactta 328  Q
    | ||| |||||    |||| |||| | |||   ||||||||||||||||| |||||| ||||||||| |||||| ||||| ||||||||||||||| |||    
5368 ttaacaacaactcagcaaaattcaccaattgaacacaattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaatta 5269  T
329 ttatcaattcatgca 343  Q
    | |||||||||||||    
5268 tcatcaattcatgca 5254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 336 - 376
Target Start/End: Complemental strand, 102963 - 102923
Alignment:
336 ttcatgcatacaaacatatcatcaaagttggagcacgaatt 376  Q
    ||||||||| |||||||||||||| | ||||||||||||||    
102963 ttcatgcattcaaacatatcatcataattggagcacgaatt 102923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 261 - 381
Target Start/End: Complemental strand, 13445 - 13325
Alignment:
261 gcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 360  Q
    |||| ||||||| ||||| |||||| ||||||||| |||||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||| |||||     
13445 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 13346  T
361 agttggagcacgaatttagca 381  Q
    | |  |||||||||| |||||    
13345 actaagagcacgaatctagca 13325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 58; Significance: 4e-24; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 130 - 382
Target Start/End: Complemental strand, 21368 - 21115
Alignment:
130 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 229  Q
    ||||||| |||||||||| ||| | || |||||||| |||||||||  |||||||| | || |||  | ||||||||||| |||||||||  | |||||     
21368 tcatcattaatccatgaatatgcaaactcaagcaattattcatcaatcataacatcaaataacattcataacatcaattgaacaagaatccaatctcaaa 21269  T
230 tcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacactta 328  Q
    | ||| ||||| | |  ||||||| | |||  || |||| |||||||||| |||||| ||||||||| |||||| ||||| || |||||||||| | |||    
21268 ttaacaacaacttaggaaaattcaccaattgagctcaatcttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatataatta 21169  T
329 ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaa 382  Q
    | ||||||| ||| ||||||||||| ||||| |    |||||||||||||||||    
21168 tcatcaattaatggatacaaacataacatcacaacaagagcacgaatttagcaa 21115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 130 - 359
Target Start/End: Complemental strand, 14313 - 14083
Alignment:
130 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 229  Q
    |||||||||||||||||| ||| | || |||||||| |||||||||  |||||||| |  | |||  | ||||| ||||| |||||||||  | |||||     
14313 tcatcatcaatccatgaatatgcaaactcaagcaattattcatcaatcataacatcaaacaacattcataacattaattgaacaagaatccaatctcaaa 14214  T
230 tcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacactta 328  Q
    | | | ||||| | |  ||||||| | |||  ||||||| |||||||||| |||||| ||||||||| |||||| ||||| || |||||||||| | |||    
14213 ttatcaacaacttaggaaaattcaccaattgagcacaatcttcataacttatcatttttacatatttcaacatgtaatttcactaacaatcatataatta 14114  T
329 ttatcaattcatgcatacaaacatatcatca 359  Q
    | ||||||||||||||||| ||||| |||||    
14113 tcatcaattcatgcatacagacataacatca 14083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 435 - 507
Target Start/End: Original strand, 80187 - 80259
Alignment:
435 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||    
80187 atgattatgataaagactaacccccttaccttaattatctccaactattagctcaagcttcacttttgctcct 80259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 9377 - 9480
Alignment:
126 attctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 225  Q
    ||||||||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || | | ||||||||||| |||||||||||| ||    
9377 attctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataact 9476  T
226 caat 229  Q
    ||||    
9477 caat 9480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 54; Significance: 9e-22; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 434 - 507
Target Start/End: Complemental strand, 162111 - 162038
Alignment:
434 gatgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    |||||||||| | || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
162111 gatgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 162038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 434 - 507
Target Start/End: Complemental strand, 166197 - 166124
Alignment:
434 gatgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    |||||||||| | || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
166197 gatgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 166124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 451 - 507
Target Start/End: Complemental strand, 116467 - 116411
Alignment:
451 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||||||||||||||||| |||| | ||||| | ||||||||||||||||||    
116467 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctcct 116411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 261 - 381
Target Start/End: Complemental strand, 1424 - 1304
Alignment:
261 gcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 360  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||||| |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
1424 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 1325  T
361 agttggagcacgaatttagca 381  Q
    ||   ||||||||||||||||    
1324 agcaagagcacgaatttagca 1304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 435 - 507
Target Start/End: Complemental strand, 5809 - 5737
Alignment:
435 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||| | || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
5809 atgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 5737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 435 - 507
Target Start/End: Complemental strand, 6015 - 5943
Alignment:
435 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||| | || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
6015 atgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 5943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 435 - 507
Target Start/End: Complemental strand, 31212 - 31140
Alignment:
435 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    |||||| || |||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
31212 atgattgtgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 31140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 49; Significance: 8e-19; HSPs: 3)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 127 - 343
Target Start/End: Original strand, 54412 - 54630
Alignment:
127 ttctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctc 226  Q
    |||||||||||||||||| || ||||||||||||   |||||||| | || | ||||||  |||  | ||||||||||||| | ||| |||||| | |||    
54412 ttctcatcatcaatccataaatatgtatacccaactcatgattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctc 54511  T
227 aattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatattt--aaacatggaatttaaccaacaatcatac 323  Q
    | |||||| ||||||| ||||| |||| | |||  | ||||||| ||||||||  ||||| |||||| ||  ||||||| ||||| ||| ||||||||||    
54512 atttcaacaacaacatatcaaaattcaccaattgagtacaattt-cataacttgacatttatacatactttgaaacatgcaatttcacccacaatcatac 54610  T
324 acttattatcaattcatgca 343  Q
    | |||| |||||||||||||    
54611 aattatcatcaattcatgca 54630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 195 - 343
Target Start/End: Original strand, 45094 - 45244
Alignment:
195 caacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatat 293  Q
    ||||||||||||| | ||| |||||| | |||| |||||| ||||||| ||||| |||| | |||  | ||||||| || |||||  ||||| ||||||     
45094 caacaacatcaatggaacatgaatcacatctcatttcaacaacaacatatcaaaattcaccaattgagtacaattt-caaaacttgacatttatacatac 45192  T
294 tt--aaacatggaatttaaccaacaatcatacacttattatcaattcatgca 343  Q
    ||  ||||||| ||||| ||| ||||||||||| |||| |||||||||||||    
45193 tttgaaacatgtaatttcacccacaatcatacaattatcatcaattcatgca 45244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 45007 - 45051
Alignment:
127 ttctcatcatcaatccatgaacatgtatacccaagcaatgattca 171  Q
    |||||||||||||||||| || |||||||||||||  ||||||||    
45007 ttctcatcatcaatccataaatatgtatacccaagtcatgattca 45051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 434 - 507
Target Start/End: Complemental strand, 385 - 312
Alignment:
434 gatgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    |||||||||| |||||| ||||||| |||||||||||||| ||||||| |||||| ||||||||||| ||||||    
385 gatgattatgataaagaataaccccgttaccttaattatcaccaactattagctcaagcttcacttttgctcct 312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 130 - 220
Target Start/End: Original strand, 48513 - 48603
Alignment:
130 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatca 220  Q
    |||||||||||||||||| ||| | ||||||||||| |||||||||  |||||||| |||| |||| | |||||||| || ||||||||||    
48513 tcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacatccataacatcaagtgaacaagaatca 48603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 393
Target Start/End: Original strand, 3364 - 3453
Alignment:
304 aatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 393  Q
    ||||| |||||||||||||||  ||| || ||||||||||||||||| || ||||| || | |||||||||||||||| |||| ||||||    
3364 aatttcaccaacaatcatacaaatatcattaattcatgcatacaaacttaacatcacagctagagcacgaatttagcatcaattatccat 3453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 436 - 507
Target Start/End: Original strand, 1701 - 1772
Alignment:
436 tgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    |||||||| | || |||||||||||||||||||||||| ||||||| || ||| ||||||||||| ||||||    
1701 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcct 1772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 436 - 507
Target Start/End: Complemental strand, 19881 - 19810
Alignment:
436 tgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    |||||||| | || |||||||||||||||||||||||| ||||||| || ||| ||||||||||| ||||||    
19881 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcct 19810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 436 - 507
Target Start/End: Complemental strand, 24185 - 24114
Alignment:
436 tgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    |||||||| | || |||||||||||||||||||||||| ||||||| || ||| ||||||| ||| ||||||    
24185 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcatttttgctcct 24114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 436 - 506
Target Start/End: Original strand, 94 - 164
Alignment:
436 tgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcc 506  Q
    |||||||| | || |||||||||||||||||||||||| ||||||| || ||| ||||||||||| |||||    
94 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcc 164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 386
Target Start/End: Complemental strand, 56226 - 56106
Alignment:
268 tttcataacttctcatttctacatattt--aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttg 365  Q
    |||||||||||  ||||| |||||| ||  ||||||| ||||| | | ||||||||||| |||| ||||| ||||||| || || ||| ||||| ||||     
56226 tttcataacttgacatttatacatactttaaaacatgtaatttcagccacaatcatacaattatcatcaaatcatgcacacgaaaataacatcacagtta 56127  T
366 gagcacgaatttagcaacaat 386  Q
    ||||||||||||| |||||||    
56126 gagcacgaatttaacaacaat 56106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 451 - 507
Target Start/End: Original strand, 35816 - 35872
Alignment:
451 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||||||||||||||||| |||| | ||||| | ||||||||||||||||||    
35816 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctcct 35872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 268 - 467
Target Start/End: Complemental strand, 10458 - 10256
Alignment:
268 tttcataacttctcatttctacatattt--aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttg 365  Q
    |||||||||||  ||||| |||||| ||  ||||||| ||||| ||| |||| |||||  | || ||||||||||||| |  || ||||||||| ||       
10458 tttcataacttagcatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatatcatcacagcaa 10359  T
366 gagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacc 464  Q
    ||||||||||||||||||||| || ||| || | |  ||||||||||||  |||||| || ||| |||  |||||||||   ||||| ||||||||||||    
10358 gagcacgaatttagcaacaattattcatcaacccattttcatacaacatgagaaaatgcaaaaattgaacatgattatgaagaagacaaacccccttacc 10259  T
465 tta 467  Q
    |||    
10258 tta 10256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 436 - 507
Target Start/End: Complemental strand, 6335 - 6264
Alignment:
436 tgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    |||||||| | || |||||||||||||||||||||||| || |||| || ||| ||||||||||| ||||||    
6335 tgattatgatgaacactaacccccttaccttaattatcacccactattaactcaagcttcacttttgctcct 6264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1560 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1560
Description:

Target: scaffold1560; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 220
Target Start/End: Complemental strand, 116 - 26
Alignment:
130 tcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatca 220  Q
    |||||||||||||||||| ||| | ||||||||||| |||||||||  |||||||| |||| |||  | || |||| ||| ||||||||||    
116 tcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattcataatatcatttgaacaagaatca 26  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 336 - 377
Target Start/End: Complemental strand, 1587 - 1546
Alignment:
336 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 377  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
1587 ttcatgcatacaaacatatcatcatagttagagcacgaattt 1546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 336 - 377
Target Start/End: Complemental strand, 8732 - 8691
Alignment:
336 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 377  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
8732 ttcatgcatacaaacatatcatcatagttagagcacgaattt 8691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 336 - 377
Target Start/End: Original strand, 8216 - 8257
Alignment:
336 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 377  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
8216 ttcatgcatacaaacatatcatcatagttagagcacgaattt 8257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 336 - 377
Target Start/End: Complemental strand, 70348 - 70307
Alignment:
336 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 377  Q
    |||||||||||||||||||||||| |||||||| ||||||||    
70348 ttcatgcatacaaacatatcatcatagttggagtacgaattt 70307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Complemental strand, 57424 - 57392
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
57424 atgattatgataaagactaacccccttacctta 57392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1295 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 451 - 507
Target Start/End: Original strand, 442 - 498
Alignment:
451 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||||||||| | ||||| |||| | ||||||| ||||||||||||||||||    
442 ctaacccccttacctcagttatcaccaattcctagctcaagcttcactttagctcct 498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 451 - 507
Target Start/End: Complemental strand, 1420 - 1364
Alignment:
451 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||||||||| ||||||| |||| | ||||||| ||||||||||||| ||||    
1420 ctaacccccttacctcaattatcaccaattcctagctcaagcttcactttagttcct 1364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 451 - 507
Target Start/End: Complemental strand, 76756 - 76700
Alignment:
451 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    |||||||||||||||||||||||  ||| | ||||| | ||||||||||||||||||    
76756 ctaacccccttaccttaattatcagcaattcctagcccaagcttcactttagctcct 76700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 339 - 377
Target Start/End: Complemental strand, 1386 - 1348
Alignment:
339 atgcatacaaacatatcatcaaagttggagcacgaattt 377  Q
    ||||||||||||||||||||| |||| ||||||||||||    
1386 atgcatacaaacatatcatcatagttagagcacgaattt 1348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 339 - 377
Target Start/End: Complemental strand, 9641 - 9603
Alignment:
339 atgcatacaaacatatcatcaaagttggagcacgaattt 377  Q
    ||||||||||||||||||||| |||| ||||||||||||    
9641 atgcatacaaacatatcatcatagttagagcacgaattt 9603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 377
Target Start/End: Complemental strand, 22463 - 22422
Alignment:
336 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 377  Q
    |||||||||||||||||||||||| | || ||||||||||||    
22463 ttcatgcatacaaacatatcatcatatttagagcacgaattt 22422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 30; Significance: 0.0000002; HSPs: 3)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 377
Target Start/End: Complemental strand, 93814 - 93773
Alignment:
336 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 377  Q
    |||||||||||| ||||||||||| | |||||||||||||||    
93814 ttcatgcatacatacatatcatcataattggagcacgaattt 93773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Original strand, 55904 - 55936
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
55904 atgattatgataaagactaacccccttacctta 55936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Complemental strand, 108107 - 108075
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
108107 atgattatgataaagactaacccccttacctta 108075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 468
Target Start/End: Complemental strand, 193429 - 193396
Alignment:
435 atgattatggtaaagactaacccccttaccttaa 468  Q
    ||||||||| ||||||||||||||||||||||||    
193429 atgattatgataaagactaacccccttaccttaa 193396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1272 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 451 - 507
Target Start/End: Original strand, 632 - 688
Alignment:
451 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    |||||||||||||| |||||||| | || | ||||| | ||||||||||||||||||    
632 ctaacccccttaccataattatcactaattcctagcccaagcttcactttagctcct 688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0970 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 2476 - 2532
Alignment:
153 atacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattg 209  Q
    |||||||||| |||| |||||||| | ||||||  |||||| |||||||||||||||    
2476 atacccaagccatgaatcatcaacaacaacatcacttagcaacaacaacatcaattg 2532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Complemental strand, 6475 - 6443
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
6475 atgattatgataaagactaacccccttacctta 6443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Complemental strand, 910 - 878
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
910 atgattatgataaagactaacccccttacctta 878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 451 - 507
Target Start/End: Original strand, 6999 - 7055
Alignment:
451 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    |||||||||||||| |||||||| |||| | ||||| | | ||||||||||||||||    
6999 ctaacccccttaccataattatcaccaattcctagcccaaccttcactttagctcct 7055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Complemental strand, 9914 - 9882
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
9914 atgattatgataaagactaacccccttacctta 9882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 336 - 376
Target Start/End: Original strand, 10868 - 10908
Alignment:
336 ttcatgcatacaaacatatcatcaaagttggagcacgaatt 376  Q
    |||||||||||||||||||||||| || | |||||||||||    
10868 ttcatgcatacaaacatatcatcatagatagagcacgaatt 10908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Complemental strand, 13317 - 13285
Alignment:
435 atgattatggtaaagactaacccccttacctta 467  Q
    ||||||||| |||||||||||||||||||||||    
13317 atgattatgataaagactaacccccttacctta 13285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 451 - 507
Target Start/End: Complemental strand, 43708 - 43652
Alignment:
451 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||||||||||||||| | | || | ||||| | ||||||||||||||||||    
43708 ctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctcct 43652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 451 - 507
Target Start/End: Original strand, 31357 - 31413
Alignment:
451 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctcct 507  Q
    ||||||||||||||||||||| | | || | ||||| | ||||||||||||||||||    
31357 ctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctcct 31413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University