View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21339_low_29 (Length: 221)
Name: NF21339_low_29
Description: NF21339
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21339_low_29 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 182; Significance: 1e-98; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 36 - 221
Target Start/End: Original strand, 33790883 - 33791068
Alignment:
| Q |
36 |
tataaaatattttgtcatgaccaatttggttgatttaatttcaggggtgtgacgcatccatattaatagactcaaagaagggcaatgaatcagagaaagc |
135 |
Q |
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| T |
33790883 |
tatacaatattttgtcatgaccaatttggttgatttaatttcaggggtgtgacgcatccatattaatagactcaaagaagggcaatgaatcagagaaagc |
33790982 |
T |
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| Q |
136 |
agcaagagcaaaccttactgtaagaggatataacctcatagatgaaatcaaaagaatcctagaaaatgcatgtccatcaacagttt |
221 |
Q |
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| T |
33790983 |
agcaagagcaaaccttactgtaagaggatataacctcatagatgaaatcaaaagaatcctagaaaatgcatgtccatcaacagttt |
33791068 |
T |
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