View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2133_high_28 (Length: 213)
Name: NF2133_high_28
Description: NF2133
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2133_high_28 |
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Alignment Details
Target: chr4 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 43856410 - 43856211
Alignment:
| Q |
1 |
tttacattttgtcgcgttcatttatcgagcaataacaacttttaactatgaatcacggtatcacattaggcataaatcaacatcaaagttaaatttaaaa |
100 |
Q |
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| T |
43856410 |
tttacattttgtcgcgttcatttatcgagcaataacaacgtttaactatgaatcccggtatcgcattaggcataaatcaacatcaaagttaaatttaaaa |
43856311 |
T |
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| Q |
101 |
tttcataacagtagcataatctggtgaccttacctctccaaggaacgtagaagacagaaggacagaaaagaaaggctccattgatttaacagtatgagta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43856310 |
tttcataacagtagcataatctggtgaccttacctctccaaggaacgtagaagacagaaggacagaaaagaaaggctccattgatttaacagtatgagta |
43856211 |
T |
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