View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2134-Insertion-4 (Length: 297)
Name: NF2134-Insertion-4
Description: NF2134
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2134-Insertion-4 |
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| [»] chr8 (2 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 272; Significance: 1e-152; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 8 - 297
Target Start/End: Original strand, 43230628 - 43230917
Alignment:
| Q |
8 |
agagtggcggagagggttggcaggagtgtttctgcagctgaattcgtattcgcatggagagatgaatgagttgttgtcagagcgacatgtgaaggaagaa |
107 |
Q |
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| T |
43230628 |
agagtggcggagagggttggcaggagtgtttctgcagctgaattcgtattcgcatggagagatgaatgagttgttgtcggagcgacatgtgaaggaagaa |
43230727 |
T |
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| Q |
108 |
tgataaaattgatggttgagcatgagagtattgattaatgcttttccagcaagtttcccacgtttgagaattaaattgaggtctaccattgttttgctct |
207 |
Q |
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| T |
43230728 |
tgataaagttgatggttgagcatgagagtattgattaatgcttttccagcaagtttcccacgtttgagaatcaaattgaggtgtaccattgttttgctct |
43230827 |
T |
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| Q |
208 |
tggctatgccytttcttataatgaacaataatacacgtaccatgttccatagcttctttgccaccacgccttgccttgcttcaatttcca |
297 |
Q |
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| T |
43230828 |
tggctatgccttttcttataatgaacaataatacacgtaccatgttccatagcttctttgccaccacgccttgccttgcttcaatttcca |
43230917 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 43235173 - 43235233
Alignment:
| Q |
234 |
aataatacacgtaccatgttccatagcttctttgccaccacgccttgccttgcttcaattt |
294 |
Q |
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| T |
43235173 |
aataatacacttaccatgttccatagcttctttgctacgatgtcttgccttgctccaattt |
43235233 |
T |
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