View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21340_low_3 (Length: 209)
Name: NF21340_low_3
Description: NF21340
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21340_low_3 |
 |  |
|
| [»] scaffold0121 (1 HSPs) |
 |  |  |
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Alignment Details
Target: chr1 (Bit Score: 167; Significance: 1e-89; HSPs: 10)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 47840287 - 47840474
Alignment:
| Q |
17 |
aaacataaaaataaattaacgca----tcttaaggcggagctaagggcccggatcaaaagaatcctgagggtccatatccacctcctccccccatattgt |
112 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
47840287 |
aaacataaaaataaattaacgcagacatcttaaggcggagctaagggcccggatcaaaagaatccggagggtccatatccacctcctccccccatattgt |
47840386 |
T |
 |
| Q |
113 |
tgaagccaaacaaatgaggttgcaacatagggttctgaaaaaactgtgttggatacatttgagcctgtggaggatttggttgatgatg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47840387 |
tgaagccaaacaaatgaggttgcaacatagggttctgaaaaaactgtgttggatacatttgagcctgtggaggatttggttgatgatg |
47840474 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 37 - 199
Target Start/End: Complemental strand, 2541145 - 2540983
Alignment:
| Q |
37 |
gcatcttaaggcggagctaagggcccggatcaaaagaatcctgagggtccatatccacctcctccccccatattgttgaagccaaacaaatgaggttgca |
136 |
Q |
| |
|
||||||||||| ||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |
|
|
| T |
2541145 |
gcatcttaaggtggatctaagggctcggatcaaaagaatctggagggtccatatccacctcctccccccatattgttgaaaccaaacagatgaggttgca |
2541046 |
T |
 |
| Q |
137 |
acatagggttctgaaaaaactgtgttggatacatttgagcctgtggaggatttggttgatgat |
199 |
Q |
| |
|
|||||||||||||||||| |||| |||| ||||||||| || |||||||||||||||||| |
|
|
| T |
2541045 |
acatagggttctgaaaaagttgtgctggaaacatttgagtttgccgaggatttggttgatgat |
2540983 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 38 - 200
Target Start/End: Original strand, 47830228 - 47830390
Alignment:
| Q |
38 |
catcttaaggcggagctaagggcccggatcaaaagaatcctgagggtccatatccacctcctccccccatattgttgaagccaaacaaatgaggttgcaa |
137 |
Q |
| |
|
||||||||| ||| |||||||| || ||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
47830228 |
catcttaagatggatctaagggctcgtatcaaaagaatccagagggtccatatccaccccttccccccatattgttgaagccaaacaactgaggttgcaa |
47830327 |
T |
 |
| Q |
138 |
catagggttctgaaaaaactgtgttggatacatttgagcctgtggaggatttggttgatgatg |
200 |
Q |
| |
|
|||||| ||||||||| ||||||||||| ||||||||| || |||||||||||||||||||| |
|
|
| T |
47830328 |
cataggattctgaaaatactgtgttggaaacatttgagtttgcggaggatttggttgatgatg |
47830390 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 21 - 200
Target Start/End: Complemental strand, 48005728 - 48005545
Alignment:
| Q |
21 |
ataaaaataaattaac----gcatcttaaggcggagctaagggcccggatcaaaagaatcctgagggtccatatccacctcctccccccatattgttgaa |
116 |
Q |
| |
|
|||||||||||||||| |||||||||||| | |||||||| |||||||||||||| ||||||||||||||||||||||| || ||||||||||| |
|
|
| T |
48005728 |
ataaaaataaattaacacgggcatcttaaggcaaatctaagggctcggatcaaaagaatttggagggtccatatccacctcctcctccaatattgttgaa |
48005629 |
T |
 |
| Q |
117 |
gccaaacaaatgaggttgcaacatagggttctgaaaaaactgtgttggatacatttgagcctgtggaggatttggttgatgatg |
200 |
Q |
| |
|
|||||||||||||||||||| ||||||||| | ||||||||||| |||| |||||| ||| |||||| |||||| ||||||||| |
|
|
| T |
48005628 |
gccaaacaaatgaggttgcagcatagggttatcaaaaaactgtgctggaaacattttagcttgtggatgatttgattgatgatg |
48005545 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 17 - 199
Target Start/End: Original strand, 47825487 - 47825673
Alignment:
| Q |
17 |
aaacataaaaataaattaac----gcatcttaaggcggagctaagggcccggatcaaaagaatcctgagggtccatatccacctcctccccccatattgt |
112 |
Q |
| |
|
||||| |||||||||||||| |||| |||| | ||| | |||||| ||||||||||||||| ||||||||||||| |||||||||| || ||||| |
|
|
| T |
47825487 |
aaacacaaaaataaattaacacgggcatattaaagtggatccaagggctcggatcaaaagaatctgaagggtccatatccgcctcctcccctcacattgt |
47825586 |
T |
 |
| Q |
113 |
tgaagccaaacaaatgaggttgcaacatagggttctgaaaaaactgtgttggatacatttgagcctgtggaggatttggttgatgat |
199 |
Q |
| |
|
|||| ||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||| || |||||||||| |||||||| |
|
|
| T |
47825587 |
tgaacccaaacaaatgaggttgcaacatggggttttgaaaaaactgtgttggaaacatttgagtttgcggaggatttgattgatgat |
47825673 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 37 - 155
Target Start/End: Complemental strand, 34507165 - 34507047
Alignment:
| Q |
37 |
gcatcttaaggcggagctaagggcccggatcaaaagaatcctgagggtccatatccacctcctccccccatattgttgaagccaaacaaatgaggttgca |
136 |
Q |
| |
|
|||||||||| ||| ||| |||| ||||||| || |||| ||||| |||| |||||| |||| || ||||||||||| ||||||||||||||||||| |
|
|
| T |
34507165 |
gcatcttaagatggatctatgggcttggatcaatagcatccggagggaccatgtccaccatctcctcctatattgttgaaaccaaacaaatgaggttgca |
34507066 |
T |
 |
| Q |
137 |
acatagggttctgaaaaaa |
155 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
34507065 |
acatagggttctgaaaaaa |
34507047 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 63 - 155
Target Start/End: Complemental strand, 33478001 - 33477909
Alignment:
| Q |
63 |
ggatcaaaagaatcctgagggtccatatccacctcctccccccatattgttgaagccaaacaaatgaggttgcaacatagggttctgaaaaaa |
155 |
Q |
| |
|
||||||| ||||||| ||||| |||| |||||| |||| |||||||||||||| |||||||||||||||||||||||||| |||||| |||| |
|
|
| T |
33478001 |
ggatcaatagaatccggagggaccatgtccaccatctcctcccatattgttgaaaccaaacaaatgaggttgcaacataggattctgacaaaa |
33477909 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 37 - 155
Target Start/End: Complemental strand, 33467971 - 33467855
Alignment:
| Q |
37 |
gcatcttaaggcggagctaagggcccggatcaaaagaatcctgagggtccatatccacctcctccccccatattgttgaagccaaacaaatgaggttgca |
136 |
Q |
| |
|
||||||||||| ||| ||| || || |||||| ||||||| ||||| |||| |||||| |||| |||||||||||||| ||||||||| ||||||||| |
|
|
| T |
33467971 |
gcatcttaaggtggatctatggacctagatcaatagaatccggagggaccatgtccacc--ctcctcccatattgttgaaaccaaacaaaagaggttgca |
33467874 |
T |
 |
| Q |
137 |
acatagggttctgaaaaaa |
155 |
Q |
| |
|
|||||||||| |||||||| |
|
|
| T |
33467873 |
acatagggttttgaaaaaa |
33467855 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 200
Target Start/End: Complemental strand, 49049119 - 49049051
Alignment:
| Q |
132 |
ttgcaacatagggttctgaaaaaactgtgttggatacatttgagcctgtggaggatttggttgatgatg |
200 |
Q |
| |
|
||||||||||||||| |||||||| |||| ||| |||||| ||| ||| ||| |||||| |||||||| |
|
|
| T |
49049119 |
ttgcaacatagggttttgaaaaaattgtggtggcaacatttcagcttgttgagcatttggctgatgatg |
49049051 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 200
Target Start/End: Complemental strand, 49064171 - 49064103
Alignment:
| Q |
132 |
ttgcaacatagggttctgaaaaaactgtgttggatacatttgagcctgtggaggatttggttgatgatg |
200 |
Q |
| |
|
||||||||||| ||| ||||||| |||| ||| |||||| ||| ||| ||||||||||||||||||| |
|
|
| T |
49064171 |
ttgcaacatagcgttttgaaaaatttgtggcggaaacatttcagcttgttgaggatttggttgatgatg |
49064103 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 115; Significance: 1e-58; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 17 - 200
Target Start/End: Complemental strand, 11620612 - 11620425
Alignment:
| Q |
17 |
aaacataaaaataaattaac----gcatcttaaggcggagctaagggcccggatcaaaagaatcctgagggtccatatccacctcctccccccatattgt |
112 |
Q |
| |
|
||||||||||||||||| || ||||||||||||||| |||||||| | ||||||||||||| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
11620612 |
aaacataaaaataaattgacacgagcatcttaaggcggatctaagggctccgatcaaaagaatctggagggtccatatccacctcctccccccatgttgt |
11620513 |
T |
 |
| Q |
113 |
tgaagccaaacaaatgaggttgcaacatagggttctgaaaaaactgtgttggatacatttgagcctgtggaggatttggttgatgatg |
200 |
Q |
| |
|
|||||||||| ||||||||||||||||| ||||||||| ||||||||| |||| |||| ||||| ||||||||||||||||||||||| |
|
|
| T |
11620512 |
tgaagccaaataaatgaggttgcaacattgggttctgataaaactgtgctggaaacatatgagcttgtggaggatttggttgatgatg |
11620425 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 155
Target Start/End: Complemental strand, 33246814 - 33246769
Alignment:
| Q |
110 |
tgttgaagccaaacaaatgaggttgcaacatagggttctgaaaaaa |
155 |
Q |
| |
|
||||||| |||||||||||||||||||||||| |||| |||||||| |
|
|
| T |
33246814 |
tgttgaaaccaaacaaatgaggttgcaacatatggttatgaaaaaa |
33246769 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 155
Target Start/End: Complemental strand, 33238900 - 33238848
Alignment:
| Q |
103 |
cccatattgttgaagccaaacaaatgaggttgcaacatagggttctgaaaaaa |
155 |
Q |
| |
|
||||| |||||||| |||||||||||||||||||||||| || | |||||||| |
|
|
| T |
33238900 |
cccatgttgttgaaaccaaacaaatgaggttgcaacatatgggtatgaaaaaa |
33238848 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 200
Target Start/End: Complemental strand, 39706278 - 39706210
Alignment:
| Q |
132 |
ttgcaacatagggttctgaaaaaactgtgttggatacatttgagcctgtggaggatttggttgatgatg |
200 |
Q |
| |
|
||||||||||||||| ||||||| |||| |||| |||||||||| ||| ||||| |||| |||||||| |
|
|
| T |
39706278 |
ttgcaacatagggttttgaaaaatttgtggtggaaacatttgagcttgttgaggaattggctgatgatg |
39706210 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 108; Significance: 2e-54; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 37 - 192
Target Start/End: Complemental strand, 20960398 - 20960243
Alignment:
| Q |
37 |
gcatcttaaggcggagctaagggcccggatcaaaagaatcctgagggtccatatccacctcctccccccatattgttgaagccaaacaaatgaggttgca |
136 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
20960398 |
gcatcttaaggcggagctaagggctcggatcaaaagaatccggagggtccgtatccacctcctccccccatattgttgaagccaaacaaatgtggttgca |
20960299 |
T |
 |
| Q |
137 |
acatagggttctgaaaaaactgtgttggatacatttgagcctgtggaggatttggt |
192 |
Q |
| |
|
|||||||||| ||| |||||| || |||| ||| ||||| ||||||||||||||| |
|
|
| T |
20960298 |
acatagggttttgataaaactctgctggaagcatctgagcttgtggaggatttggt |
20960243 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 37 - 200
Target Start/End: Complemental strand, 20974303 - 20974140
Alignment:
| Q |
37 |
gcatcttaaggcggagctaagggcccggatcaaaagaatcctgagggtccatatccacctcctccccccatattgttgaagccaaacaaatgaggttgca |
136 |
Q |
| |
|
||||||| || |||| |||||||| | ||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
20974303 |
gcatcttgagacggatctaagggctctgatcaaaagaatcaggagggtccatttccacctcctccccctatattgttgaagccaaacaaatgaggttgca |
20974204 |
T |
 |
| Q |
137 |
acatagggttctgaaaaaactgtgttggatacatttgagcctgtggaggatttggttgatgatg |
200 |
Q |
| |
|
|||||||||||||| ||||||||| |||| ||| ||||| |||||||||||| |||||||||| |
|
|
| T |
20974203 |
acatagggttctgataaaactgtgctggaagcatctgagcttgtggaggatttagttgatgatg |
20974140 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 37 - 154
Target Start/End: Original strand, 30536289 - 30536406
Alignment:
| Q |
37 |
gcatcttaaggcggagctaagggcccggatcaaaagaatcctgagggtccatatccacctcctccccccatattgttgaagccaaacaaatgaggttgca |
136 |
Q |
| |
|
||||| ||||| ||| |||||||| ||||||||||||| || ||| |||| ||||||| |||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
30536289 |
gcatcgtaaggtggatctaagggctcggatcaaaagaacccatggggaccatgtccaccttctcctcccatattgttgaagccaaacaaatgaggttgca |
30536388 |
T |
 |
| Q |
137 |
acatagggttctgaaaaa |
154 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
30536389 |
acatagggttctgaaaaa |
30536406 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 155
Target Start/End: Complemental strand, 30539358 - 30539306
Alignment:
| Q |
103 |
cccatattgttgaagccaaacaaatgaggttgcaacatagggttctgaaaaaa |
155 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||| |||| |||||||| |
|
|
| T |
30539358 |
cccatattgttgaagccaaacaaatgaggttgcatcataaggttatgaaaaaa |
30539306 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 146
Target Start/End: Original strand, 9761039 - 9761081
Alignment:
| Q |
104 |
ccatattgttgaagccaaacaaatgaggttgcaacatagggtt |
146 |
Q |
| |
|
|||||||||||||||||| ||||||| ||||||||||||||| |
|
|
| T |
9761039 |
ccatattgttgaagccaattaaatgagattgcaacatagggtt |
9761081 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 38 - 200
Target Start/End: Original strand, 16776095 - 16776257
Alignment:
| Q |
38 |
catcttaaggcggagctaagggcccggatcaaaagaatcctgagggtccatatccacctcctccccccatattgttgaagccaaacaaatgaggttgcaa |
137 |
Q |
| |
|
|||||||||| ||| |||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||||||||||| ||| || |
|
|
| T |
16776095 |
catcttaaggtggatctaagggctcggatcaaaagaatctggagggtccatatccacctcctcccctcatattgttggaaccaaacaaatgagattgtaa |
16776194 |
T |
 |
| Q |
138 |
catagggttctgaaaaaactgtgttggatacatttgagcctgtggaggatttggttgatgatg |
200 |
Q |
| |
|
|||||| ||||||||||| |||| |||| ||||||| | || | |||||||||||||||||| |
|
|
| T |
16776195 |
cataggattctgaaaaaattgtgctggaaacatttgggtttgcgaaggatttggttgatgatg |
16776257 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 52; Significance: 5e-21; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 37 - 156
Target Start/End: Original strand, 22699913 - 22700032
Alignment:
| Q |
37 |
gcatcttaaggcggagctaagggcccggatcaaaagaatcctgagggtccatatccacctcctccccccatattgttgaagccaaacaaatgaggttgca |
136 |
Q |
| |
|
||||||||||| ||| || |||| | |||||||||| || |||| |||| ||||| | || | |||||||||||||| ||||||||||||||||||| |
|
|
| T |
22699913 |
gcatcttaaggtggatttaggggctcatatcaaaagaacccatagggaccatgtccacattcttctcccatattgttgaaaccaaacaaatgaggttgca |
22700012 |
T |
 |
| Q |
137 |
acatagggttctgaaaaaac |
156 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
22700013 |
acatagggttctgaaaaaac |
22700032 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 85 - 151
Target Start/End: Complemental strand, 22002507 - 22002441
Alignment:
| Q |
85 |
ccatatccacctcctccccccatattgttgaagccaaacaaatgaggttgcaacatagggttctgaa |
151 |
Q |
| |
|
|||| ||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
22002507 |
ccatgtccaccttctcctcccatattgttgaagccaaacaaatgtggttgcaacatagggttctgaa |
22002441 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 37 - 160
Target Start/End: Complemental strand, 19988713 - 19988590
Alignment:
| Q |
37 |
gcatcttaaggcggagctaagggcccggatcaaaagaatcctgagggtccatatccacctcctccccccatattgttgaagccaaacaaatgaggttgca |
136 |
Q |
| |
|
||||||||||| || |||||||| ||||||||||||| || ||| |||| |||||| |||| ||||||||||||||| |||| ||||||||||| | |
|
|
| T |
19988713 |
gcatcttaaggtggttctaagggctcggatcaaaagaacccatggggaccatgcccaccttctcctcccatattgttgaagtcaaataaatgaggttgaa |
19988614 |
T |
 |
| Q |
137 |
acatagggttctgaaaaaactgtg |
160 |
Q |
| |
|
|||| ||||| || ||||| |||| |
|
|
| T |
19988613 |
acattgggttttgtaaaaattgtg |
19988590 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0121 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0121
Description:
Target: scaffold0121; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 105 - 196
Target Start/End: Complemental strand, 35291 - 35200
Alignment:
| Q |
105 |
catattgttgaagccaaacaaatgaggttgcaacatagggttctgaaaaaactgtgttggatacatttgagcctgtggaggatttggttgat |
196 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| ||||||| |||||||| |||| |||| |||||| || ||| |||||||||| |||| |
|
|
| T |
35291 |
catattgttgaagccaaacaaatgagattgcaatatagggtaatgaaaaaattgtggtggaaacatttcagtttgttgaggatttggctgat |
35200 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 103 - 153
Target Start/End: Complemental strand, 22650843 - 22650793
Alignment:
| Q |
103 |
cccatattgttgaagccaaacaaatgaggttgcaacatagggttctgaaaa |
153 |
Q |
| |
|
|||||||||||||| |||| ||||||||||||||||||||||| |||||| |
|
|
| T |
22650843 |
cccatattgttgaaaccaattaaatgaggttgcaacatagggttatgaaaa |
22650793 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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