View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21342_high_22 (Length: 236)

Name: NF21342_high_22
Description: NF21342
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21342_high_22
NF21342_high_22
[»] chr5 (3 HSPs)
chr5 (1-222)||(15160478-15160710)
chr5 (106-157)||(14416869-14416920)
chr5 (106-181)||(19614804-19614878)
[»] chr2 (3 HSPs)
chr2 (105-194)||(24846762-24846851)
chr2 (106-180)||(18814834-18814906)
chr2 (106-181)||(45404489-45404564)
[»] chr8 (2 HSPs)
chr8 (1-96)||(26465267-26465362)
chr8 (116-157)||(8833686-8833727)
[»] chr6 (7 HSPs)
chr6 (107-180)||(7913263-7913336)
chr6 (1-96)||(14369689-14369783)
chr6 (116-192)||(13144355-13144430)
chr6 (106-181)||(7601103-7601178)
chr6 (122-167)||(6331358-6331403)
chr6 (106-180)||(16722036-16722111)
chr6 (124-168)||(6346731-6346775)
[»] chr4 (4 HSPs)
chr4 (105-206)||(8353463-8353564)
chr4 (106-181)||(28461345-28461420)
chr4 (106-181)||(8572931-8573006)
chr4 (106-164)||(2549482-2549540)
[»] scaffold0726 (1 HSPs)
scaffold0726 (106-168)||(350-412)
[»] chr7 (6 HSPs)
chr7 (106-168)||(28312851-28312913)
chr7 (106-178)||(17710771-17710842)
chr7 (105-176)||(25035245-25035314)
chr7 (106-180)||(3365240-3365314)
chr7 (106-168)||(24731616-24731677)
chr7 (116-164)||(7711216-7711264)
[»] chr3 (5 HSPs)
chr3 (106-168)||(24993526-24993588)
chr3 (106-181)||(23363046-23363121)
chr3 (113-178)||(36084662-36084726)
chr3 (106-180)||(28698891-28698965)
chr3 (104-181)||(9639253-9639329)
[»] chr1 (2 HSPs)
chr1 (111-180)||(20427563-20427631)
chr1 (107-160)||(33153725-33153778)


Alignment Details
Target: chr5 (Bit Score: 175; Significance: 2e-94; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 15160710 - 15160478
Alignment:
Q  1 ttttttcatatcctgttttcaaatgcatgggcatgcaaagtagccttcctctgtcgtcctgctattttcaggtttatttagaacactagttagcttctgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  15160710 ttttttcatatcctgttttcaaatgcatgggcatgcaaagtagccttcctctgtcgtcctggtattttcaggtttatttagaacactagttagcttctgt 15160611  T
Q  101 tctatttcactattcagtaacatttatgcaacaaaatttgctacaattgcacctaaaactgttagctaca-----------aattggctacttaatgagt 189  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||           |||||||||||||||||||    
T  15160610 tctatttcactattcagtaacatttatgtaacaaaatttgctacagttgcacctaaaactgttagctacaaattagctacaaattggctacttaatgagt 15160511  T
Q  190 aacagcttttaagtgttcctgaaatcatttagt 222  Q
    ||||| ||||||||||| |||||||||||||||    
T  15160510 aacagtttttaagtgttactgaaatcatttagt 15160478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 106 - 157
Target Start/End: Complemental strand, 14416920 - 14416869
Alignment:
Q  106 ttcactattcagtaacatttatgcaacaaaatttgctacaattgcacctaaa 157  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14416920 ttcactattcagtaacatttatgcaacaaaatttgctacaattgcatctaaa 14416869  T

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Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 19614804 - 19614878
Alignment:
Q  106 ttcactattcagtaacatttatgcaacaaaatttgctacaattgcacctaaaactgttagctacaaattggctact 181  Q
    |||||||||||| |||||||||||||| |||||| || ||||| ||  ||||||| ||||||||| ||||||||||    
T  19614804 ttcactattcagcaacatttatgcaac-aaattttctgcaattccaattaaaactattagctacagattggctact 19614878  T

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Target: chr2 (Bit Score: 74; Significance: 4e-34; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 105 - 194
Target Start/End: Original strand, 24846762 - 24846851
Alignment:
Q  105 tttcactattcagtaacatttatgcaacaaaatttgctacaattgcacctaaaactgttagctacaaattggctacttaatgagtaacag 194  Q
    |||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  24846762 tttcactattcagtaacattcatgcaacagaatttgctgcaattgcacctaaaactgttagctacaaattagctacttaatgagtaacag 24846851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 106 - 180
Target Start/End: Complemental strand, 18814906 - 18814834
Alignment:
Q  106 ttcactattcagtaacatttatgcaacaaaatttgctacaattgcacctaaaactgttagctacaaattggctac 180  Q
    ||||||||| ||||||||||||||||||||||||||| |||||| |||||| ||  ||||||| | |||||||||    
T  18814906 ttcactattgagtaacatttatgcaacaaaatttgctgcaattgtacctaacac--ttagctatagattggctac 18814834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 45404489 - 45404564
Alignment:
Q  106 ttcactattcagtaacatttatgcaacaaaatttgctacaattgcacctaaaactgttagctacaaattggctact 181  Q
    ||||||||||||||| |||||||||||| |||||  | ||||| ||  ||||||||||||||||| ||||||||||    
T  45404489 ttcactattcagtaaaatttatgcaacataattttttgcaattccaattaaaactgttagctacagattggctact 45404564  T

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Target: chr8 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 26465362 - 26465267
Alignment:
Q  1 ttttttcatatcctgttttcaaatgcatgggcatgcaaagtagccttcctctgtcgtcctgctattttcaggtttatttagaacactagttagctt 96  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| || |||||||||| ||||||||||||||| ||||    
T  26465362 ttttttcatatcctgttttcaaatacatgggcatgcaaagtagccttcctctgccgtcctggtactttcaggtttctttagaacactagttcgctt 26465267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 157
Target Start/End: Complemental strand, 8833727 - 8833686
Alignment:
Q  116 agtaacatttatgcaacaaaatttgctacaattgcacctaaa 157  Q
    |||||||| |||||||||||||||||| | ||||||||||||    
T  8833727 agtaacatatatgcaacaaaatttgcttccattgcacctaaa 8833686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 3e-29; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 107 - 180
Target Start/End: Original strand, 7913263 - 7913336
Alignment:
Q  107 tcactattcagtaacatttatgcaacaaaatttgctacaattgcacctaaaactgttagctacaaattggctac 180  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  7913263 tcactattcagtaacatttatgcaacaaaatttgctacaattgcacctaaaattgttagctataaattggctac 7913336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 14369783 - 14369689
Alignment:
Q  1 ttttttcatatcctgttttcaaatgcatgggcatgcaaagtagccttcctctgtcgtcctgctattttcaggtttatttagaacactagttagctt 96  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||| || |||||||||| ||||||| ||||||| ||||    
T  14369783 ttttttcatatcctgttttcaaatacatgggcatgcatagtagccttcctctgccgtcctggtactttcaggtttctttagaa-actagttcgctt 14369689  T

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Target: chr6; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 13144355 - 13144430
Alignment:
Q  116 agtaacatttatgcaacaaaatttgctacaattgcacctaaaactgttagctacaaattggctacttaatgagtaac 192  Q
    |||||||||||||||||| |||||||| ||||| |||||| ||||||||||||  |||| |||||||||||||||||    
T  13144355 agtaacatttatgcaacataatttgctgcaatttcacctagaactgttagcta-gaattagctacttaatgagtaac 13144430  T

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Target: chr6; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 7601103 - 7601178
Alignment:
Q  106 ttcactattcagtaacatttatgcaacaaaatttgctacaattgcacctaaaactgttagctacaaattggctact 181  Q
    |||||||||||||||||||||||||||| ||||| || ||||| ||  ||||| ||||||||||| ||||||||||    
T  7601103 ttcactattcagtaacatttatgcaacagaattttctgcaattccaattaaaattgttagctacagattggctact 7601178  T

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Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 167
Target Start/End: Original strand, 6331358 - 6331403
Alignment:
Q  122 atttatgcaacaaaatttgctacaattgcacctaaaactgttagct 167  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||    
T  6331358 atttatgcaacaaaatttgcttcaattgcacctaaaattgttagct 6331403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 180
Target Start/End: Original strand, 16722036 - 16722111
Alignment:
Q  106 ttcactattcagtaacatttatgcaacaaaatttgcta-caattgcacctaaaactgttagctacaaattggctac 180  Q
    |||||||||||||||||||||||||||| |||||   | ||||| ||  ||||||||||||||||| |||||||||    
T  16722036 ttcactattcagtaacatttatgcaacataatttttcagcaattccaattaaaactgttagctacagattggctac 16722111  T

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Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 168
Target Start/End: Original strand, 6346731 - 6346775
Alignment:
Q  124 ttatgcaacaaaatttgctacaattgcacctaaaactgttagcta 168  Q
    ||||| |||||||||||||  |||||||||||||| |||||||||    
T  6346731 ttatggaacaaaatttgctttaattgcacctaaaattgttagcta 6346775  T

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Target: chr4 (Bit Score: 62; Significance: 6e-27; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 105 - 206
Target Start/End: Complemental strand, 8353564 - 8353463
Alignment:
Q  105 tttcactattcagtaacatttatgcaacaaaatttgctacaattgcacctaaaactgttagctacaaattggctacttaatgagtaacagcttttaagtg 204  Q
    |||||||||||||||||||| | |||||| |||||||| ||||||||||| |||||||||| ||| |||| ||||||||||||||||||| | |||||||    
T  8353564 tttcactattcagtaacattcacgcaacagaatttgctgcaattgcacctgaaactgttagttactaattagctacttaatgagtaacagttcttaagtg 8353465  T
Q  205 tt 206  Q
    ||    
T  8353464 tt 8353463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 28461420 - 28461345
Alignment:
Q  106 ttcactattcagtaacatttatgcaacaaaatttgctacaattgcacctaaaactgttagctacaaattggctact 181  Q
    |||||||||||||||||||||||||||| ||||| || ||||| ||  ||||| ||||||||||| ||||||||||    
T  28461420 ttcactattcagtaacatttatgcaacagaattttctgcaattccaattaaaattgttagctacagattggctact 28461345  T

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Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 8572931 - 8573006
Alignment:
Q  106 ttcactattcagtaacatttatgcaacaaaatttgctacaattgcacctaaaactgttagctacaaattggctact 181  Q
    ||||||||| |||||||||||||||||| ||||| |  | ||| ||  ||||||||||||||||| ||||||||||    
T  8572931 ttcactattaagtaacatttatgcaacagaattttcagcgattccaattaaaactgttagctacagattggctact 8573006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 2549540 - 2549482
Alignment:
Q  106 ttcactattcagtaacatttatgcaacaaaatttgctacaattgcacctaaaactgtta 164  Q
    |||||||||||||||||||||||||||| |||| ||| ||||| || ||||||| ||||    
T  2549540 ttcactattcagtaacatttatgcaacataattcgcttcaatttcaactaaaaccgtta 2549482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0726 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0726
Description:

Target: scaffold0726; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 106 - 168
Target Start/End: Original strand, 350 - 412
Alignment:
Q  106 ttcactattcagtaacatttatgcaacaaaatttgctacaattgcacctaaaactgttagcta 168  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  350 ttcactattaagtaacatttatgcaacaaaatttgctacaattgctcctaaaacagttagcta 412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 2e-20; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 106 - 168
Target Start/End: Complemental strand, 28312913 - 28312851
Alignment:
Q  106 ttcactattcagtaacatttatgcaacaaaatttgctacaattgcacctaaaactgttagcta 168  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  28312913 ttcaccattcagtaatatttatgcaacaaaatttgctacaattgctcctaaaactgttagcta 28312851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 106 - 178
Target Start/End: Complemental strand, 17710842 - 17710771
Alignment:
Q  106 ttcactattcagtaacatttatgcaacaaaatttgctacaattgcacctaaaactgttagctacaaattggct 178  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||||| ||||||||||||||| |||||||    
T  17710842 ttcactattcagtaacatttatgcaatgaaatttgctacagttgcacct-aaactgttagctacagattggct 17710771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 176
Target Start/End: Complemental strand, 25035314 - 25035245
Alignment:
Q  105 tttcactattcagtaacatttatgcaacaaaatttgctacaattgcacctaaaactgttagctacaaattgg 176  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||   ||||||||||||| |||||    
T  25035314 tttcactattcagtaacatttatgcaacataatttgctacaattgcacct--cactgttagctacagattgg 25035245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 180
Target Start/End: Complemental strand, 3365314 - 3365240
Alignment:
Q  106 ttcactattcagtaacatttatgcaacaaaatttgctacaattgcacctaaaactgttagctacaaattggctac 180  Q
    |||||||||||||||||||||||||||| ||||  |  ||||| ||  ||||||||||||||||| |||||||||    
T  3365314 ttcactattcagtaacatttatgcaacagaattatcagcaattccaattaaaactgttagctacagattggctac 3365240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 168
Target Start/End: Original strand, 24731616 - 24731677
Alignment:
Q  106 ttcactattcagtaacatttatgcaacaaaatttgctacaattgcacctaaaactgttagcta 168  Q
    ||||| |||||| |||||||||||||||||||||| |||||||||  ||||||||||||||||    
T  24731616 ttcaccattcagaaacatttatgcaacaaaatttgatacaattgc-tctaaaactgttagcta 24731677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 7711216 - 7711264
Alignment:
Q  116 agtaacatttatgcaacaaaatttgctacaattgcacctaaaactgtta 164  Q
    ||||||||||| | |||| |||||||| |||||||| ||||||||||||    
T  7711216 agtaacatttaagtaacagaatttgctgcaattgcaactaaaactgtta 7711264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 2e-20; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 106 - 168
Target Start/End: Complemental strand, 24993588 - 24993526
Alignment:
Q  106 ttcactattcagtaacatttatgcaacaaaatttgctacaattgcacctaaaactgttagcta 168  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  24993588 ttcactattaagtaacatttatgcaacaaaatttgctacaattgctcctaaaacagttagcta 24993526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 23363046 - 23363121
Alignment:
Q  106 ttcactattcagtaacatttatgcaacaaaatttgctacaattgcacctaaaactgttagctacaaattggctact 181  Q
    |||||||||||||||||||||||||||| ||||| || ||||| ||  ||||||||||||||||| ||||||||||    
T  23363046 ttcactattcagtaacatttatgcaacagaattttctgcaattccaattaaaactgttagctacagattggctact 23363121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 113 - 178
Target Start/End: Complemental strand, 36084726 - 36084662
Alignment:
Q  113 ttcagtaacatttatgcaacaaaatttgctacaattgcacctaaaactgttagctacaaattggct 178  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||||||||||| | |||||||    
T  36084726 ttcagtaacatttatgcaacaatttttgctacaattgcacct-aaactgttagctatagattggct 36084662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 106 - 180
Target Start/End: Original strand, 28698891 - 28698965
Alignment:
Q  106 ttcactattcagtaacatttatgcaacaaaatttgctacaattgcacctaaaactgttagctacaaattggctac 180  Q
    ||||||||| |||||||||||||||||| ||||| |  | ||| ||  ||||||||||||||||| |||||||||    
T  28698891 ttcactattaagtaacatttatgcaacagaattttcagcgattccaattaaaactgttagctacagattggctac 28698965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 181
Target Start/End: Complemental strand, 9639329 - 9639253
Alignment:
Q  104 atttcactattcagtaacatttatgcaacaaaatttgctacaattgcacctaaaactgttagctacaaattggctact 181  Q
    |||||||||| ||| |||||||||||| || ||||| || ||||| ||  ||||||||||||||||  ||||||||||    
T  9639329 atttcactat-cagcaacatttatgcagcataattttctgcaattccaattaaaactgttagctactgattggctact 9639253  T

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Target: chr1 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 20427563 - 20427631
Alignment:
Q  111 tattcagtaacatttatgcaacaaaatttgctacaattgcacctaaaactgttagctacaaattggctac 180  Q
    ||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||| | |||||||||    
T  20427563 tattcagtaacatttatgcaacaaaatttgctacagttgtacct-aaactgttagctatagattggctac 20427631  T

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Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 160
Target Start/End: Original strand, 33153725 - 33153778
Alignment:
Q  107 tcactattcagtaacatttatgcaacaaaatttgctacaattgcacctaaaact 160  Q
    |||| ||| |||||||||||||||||| ||||  ||||||||||| ||||||||    
T  33153725 tcaccatttagtaacatttatgcaacataattacctacaattgcaactaaaact 33153778  T

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