View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21342_low_14 (Length: 319)
Name: NF21342_low_14
Description: NF21342
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21342_low_14 |
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Alignment Details
Target: chr2 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 1 - 306
Target Start/End: Original strand, 19514287 - 19514592
Alignment:
| Q |
1 |
agtaagtgcatcagaggaaagatcaagcatatcaatgcaatcagaaacagcattagagagacgtgaatctccaaatccagaaccaccaaattgagaaaga |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19514287 |
agtaagtgcatcagaggaaagatcaagcatatcaatgcaatcagaaacagcattagagagacgtgaatctccaaatccagaaccaccaaattgagaaaga |
19514386 |
T |
|
| Q |
101 |
atggacattacttcttgcaaaatgccaacaacatcttgcactgtcccaacaaattcagatggagcaaccttaagaaactcaaattcagatgctgctttag |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
19514387 |
atggacattacttcttgcaaaatgccaacaacatcttgcactgtcccaacaaattcagatggagcaaccttaagaaactcaaattcagatgttgctttag |
19514486 |
T |
|
| Q |
201 |
tgggagcactagcacatagtgctggagtagacaacaataatgttaaaatgaatgtgcatgttatgagagtgggtattggttttgttcgagatagtactaa |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19514487 |
tgggagcactagcacatagtgctggagtagacaacaataatgttaaaatgaatgtgcatgttatgagagtgggtattggttttgttcgagatagtactaa |
19514586 |
T |
|
| Q |
301 |
ctcttt |
306 |
Q |
| |
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|||||| |
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| T |
19514587 |
ctcttt |
19514592 |
T |
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