View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21343_low_4 (Length: 371)
Name: NF21343_low_4
Description: NF21343
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21343_low_4 |
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Alignment Details
Target: chr8 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 19 - 358
Target Start/End: Original strand, 10190366 - 10190702
Alignment:
| Q |
19 |
ataacttaccataccaagtgcaacattctggttttgaattcaagtcacggtagatgtcatggttgaatttctttgatatttaattttgaaggattacata |
118 |
Q |
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| T |
10190366 |
ataacttaccataccaagtgcaacattctggttttgaattcaagtcacggtagatgtcatggttgaatttctttgatatttaattttgaaggattacata |
10190465 |
T |
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| Q |
119 |
aacaacccaaatgctgcatttaaataaataaacattgatgtataagttttgtcaagttagtcccaaaatggaaatttgaataactgaattaaatataact |
218 |
Q |
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| T |
10190466 |
aacaacccaaatgctgcatttaaataaataaacattgatgtataagttttgtcaagttggtcccaaaatggaaatttgaataactgaattaaatataact |
10190565 |
T |
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| Q |
219 |
acaatatagtggcatatcattgatccattaatggagaagaaagttattaccaagttgaattgttaagtacacgtttacagtacaatgaaatagtcatacc |
318 |
Q |
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| T |
10190566 |
cccgtatagtggcatatcattgatccat---tggagaagaaagttattaccaagttgaattgtgaagtacacgtttacagtacaatgaaatagtcacacc |
10190662 |
T |
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| Q |
319 |
agcaaacaaaaccattggacttgccgctgtttcttccttc |
358 |
Q |
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| T |
10190663 |
agcaaacaaaaccattggacttgccgctgtttcttccttc |
10190702 |
T |
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