View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21347_high_38 (Length: 325)

Name: NF21347_high_38
Description: NF21347
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21347_high_38
NF21347_high_38
[»] scaffold0347 (2 HSPs)
scaffold0347 (1-165)||(14440-14605)
scaffold0347 (1-44)||(13697-13740)
[»] chr7 (30 HSPs)
chr7 (153-323)||(38644382-38644553)
chr7 (1-113)||(38644571-38644672)
chr7 (1-55)||(38643638-38643692)
chr7 (97-150)||(43123398-43123451)
chr7 (4-71)||(2640448-2640515)
chr7 (4-71)||(5457177-5457244)
chr7 (4-55)||(32053429-32053480)
chr7 (4-71)||(23181264-23181331)
chr7 (4-71)||(24388910-24388977)
chr7 (4-71)||(28469278-28469345)
chr7 (4-71)||(40379860-40379927)
chr7 (1-71)||(45915750-45915820)
chr7 (4-69)||(3914229-3914294)
chr7 (4-49)||(6571104-6571149)
chr7 (4-45)||(17102111-17102152)
chr7 (4-45)||(27396891-27396932)
chr7 (4-45)||(27991830-27991871)
chr7 (4-45)||(30948425-30948466)
chr7 (4-45)||(32680860-32680901)
chr7 (4-45)||(42731510-42731551)
chr7 (4-45)||(45010900-45010941)
chr7 (26-82)||(22539252-22539308)
chr7 (4-71)||(10935885-10935952)
chr7 (4-66)||(11397469-11397531)
chr7 (4-45)||(22871573-22871614)
chr7 (4-45)||(32299001-32299042)
chr7 (4-45)||(34928915-34928956)
chr7 (10-71)||(37656949-37657010)
chr7 (4-45)||(39686799-39686840)
chr7 (4-45)||(45010689-45010730)
[»] chr1 (50 HSPs)
chr1 (1-113)||(25065858-25065970)
chr1 (4-71)||(34850335-34850402)
chr1 (101-150)||(25065797-25065846)
chr1 (3-71)||(37578462-37578530)
chr1 (4-71)||(24009811-24009878)
chr1 (4-71)||(14879062-14879129)
chr1 (4-55)||(32917351-32917402)
chr1 (4-45)||(1841550-1841591)
chr1 (4-69)||(6367653-6367718)
chr1 (4-48)||(1103552-1103596)
chr1 (4-71)||(4960631-4960698)
chr1 (4-55)||(40210656-40210707)
chr1 (4-71)||(46163121-46163188)
chr1 (7-58)||(48691242-48691293)
chr1 (4-50)||(10304014-10304060)
chr1 (4-50)||(10304146-10304192)
chr1 (1-55)||(25065021-25065075)
chr1 (3-45)||(31514582-31514624)
chr1 (4-62)||(34849102-34849160)
chr1 (4-45)||(183487-183528)
chr1 (4-45)||(4716733-4716774)
chr1 (4-69)||(13914339-13914404)
chr1 (4-45)||(24905432-24905473)
chr1 (4-45)||(25647975-25648016)
chr1 (4-45)||(28011454-28011495)
chr1 (4-45)||(33442859-33442900)
chr1 (4-45)||(36694544-36694585)
chr1 (4-45)||(36710645-36710686)
chr1 (4-45)||(42248564-42248605)
chr1 (4-71)||(9443663-9443731)
chr1 (4-60)||(13245941-13245997)
chr1 (4-44)||(42267394-42267434)
chr1 (4-55)||(17662136-17662187)
chr1 (4-71)||(27999121-27999188)
chr1 (4-43)||(40772598-40772637)
chr1 (4-71)||(41098824-41098891)
chr1 (4-71)||(43758913-43758980)
chr1 (4-71)||(44523406-44523473)
chr1 (4-42)||(16970834-16970872)
chr1 (4-69)||(19017901-19017966)
chr1 (4-45)||(19515910-19515951)
chr1 (4-45)||(26024514-26024555)
chr1 (4-45)||(30711418-30711459)
chr1 (4-45)||(34464745-34464786)
chr1 (4-45)||(35152434-35152475)
chr1 (4-45)||(47999388-47999429)
chr1 (4-45)||(52134159-52134200)
chr1 (4-60)||(21444685-21444741)
chr1 (4-60)||(22103787-22103843)
chr1 (3-71)||(35152613-35152681)
[»] chr4 (42 HSPs)
chr4 (4-69)||(48528563-48528628)
chr4 (3-71)||(16605692-16605760)
chr4 (4-71)||(35028268-35028335)
chr4 (4-71)||(14801827-14801894)
chr4 (5-91)||(54435347-54435433)
chr4 (4-45)||(37976449-37976490)
chr4 (4-49)||(50418929-50418974)
chr4 (7-55)||(17356208-17356256)
chr4 (4-71)||(15507943-15508010)
chr4 (4-55)||(34765666-34765717)
chr4 (4-55)||(52298117-52298168)
chr4 (3-45)||(4982991-4983033)
chr4 (4-50)||(16005929-16005975)
chr4 (4-50)||(44967329-44967375)
chr4 (4-62)||(48529855-48529913)
chr4 (11-69)||(53129778-53129836)
chr4 (4-70)||(53701903-53701969)
chr4 (4-45)||(9145031-9145072)
chr4 (4-45)||(13058128-13058169)
chr4 (4-45)||(18831440-18831481)
chr4 (4-45)||(23613400-23613441)
chr4 (4-45)||(27934623-27934664)
chr4 (4-45)||(32950233-32950274)
chr4 (4-45)||(36009109-36009150)
chr4 (4-45)||(37248327-37248368)
chr4 (4-45)||(42738296-42738337)
chr4 (4-45)||(43155792-43155833)
chr4 (4-45)||(49879472-49879513)
chr4 (3-55)||(10781770-10781822)
chr4 (3-55)||(24349764-24349816)
chr4 (4-44)||(24711202-24711242)
chr4 (4-44)||(54086992-54087032)
chr4 (4-45)||(5369038-5369079)
chr4 (4-45)||(9400784-9400825)
chr4 (4-45)||(22566890-22566931)
chr4 (4-45)||(33247538-33247579)
chr4 (4-45)||(34837339-34837380)
chr4 (4-45)||(35508536-35508577)
chr4 (4-45)||(38012261-38012302)
chr4 (4-45)||(52909344-52909385)
chr4 (98-150)||(55866333-55866386)
chr4 (4-48)||(51692644-51692688)
[»] chr3 (25 HSPs)
chr3 (4-71)||(33156264-33156331)
chr3 (4-69)||(23458251-23458316)
chr3 (4-71)||(9294228-9294295)
chr3 (4-55)||(26463884-26463935)
chr3 (4-71)||(33689649-33689716)
chr3 (4-71)||(43384374-43384441)
chr3 (4-45)||(19741188-19741229)
chr3 (4-71)||(40758235-40758302)
chr3 (4-55)||(41988053-41988104)
chr3 (4-50)||(40033747-40033793)
chr3 (4-54)||(51994173-51994223)
chr3 (4-45)||(2796270-2796311)
chr3 (4-45)||(8041707-8041748)
chr3 (4-45)||(10770756-10770797)
chr3 (97-142)||(21783621-21783666)
chr3 (4-45)||(36314563-36314604)
chr3 (4-45)||(48322642-48322683)
chr3 (4-45)||(54466514-54466555)
chr3 (4-48)||(40506080-40506124)
chr3 (4-71)||(25108365-25108432)
chr3 (4-70)||(25107304-25107370)
chr3 (4-54)||(44654790-44654840)
chr3 (4-45)||(46474906-46474947)
chr3 (4-60)||(20704608-20704664)
chr3 (4-44)||(55052545-55052585)
[»] chr2 (30 HSPs)
chr2 (4-69)||(36755184-36755249)
chr2 (4-69)||(37895619-37895684)
chr2 (4-60)||(11721371-11721427)
chr2 (4-55)||(15848179-15848230)
chr2 (4-91)||(25893468-25893555)
chr2 (4-71)||(36382252-36382319)
chr2 (4-71)||(39423606-39423673)
chr2 (4-50)||(17266489-17266535)
chr2 (4-49)||(1696001-1696046)
chr2 (4-45)||(6657969-6658010)
chr2 (4-61)||(10840567-10840624)
chr2 (4-45)||(11163319-11163360)
chr2 (4-45)||(14900748-14900789)
chr2 (4-45)||(16099146-16099187)
chr2 (4-45)||(33739794-33739835)
chr2 (4-69)||(34447904-34447968)
chr2 (4-45)||(39498401-39498442)
chr2 (4-45)||(44714057-44714098)
chr2 (28-91)||(6573656-6573719)
chr2 (4-71)||(10712814-10712881)
chr2 (4-47)||(17266624-17266667)
chr2 (4-69)||(2318249-2318314)
chr2 (4-49)||(6573137-6573182)
chr2 (4-45)||(13995938-13995979)
chr2 (4-45)||(33062315-33062356)
chr2 (4-45)||(36479809-36479850)
chr2 (4-45)||(41248824-41248865)
chr2 (4-60)||(11689632-11689688)
chr2 (1-53)||(25624393-25624445)
chr2 (3-71)||(44044204-44044272)
[»] chr5 (30 HSPs)
chr5 (4-71)||(14848976-14849044)
chr5 (4-71)||(13962955-13963022)
chr5 (4-71)||(19892578-19892645)
chr5 (4-55)||(35512239-35512290)
chr5 (4-71)||(38442159-38442226)
chr5 (4-69)||(29646634-29646699)
chr5 (4-69)||(32242333-32242398)
chr5 (4-48)||(8322495-8322539)
chr5 (4-48)||(35920477-35920521)
chr5 (4-55)||(5024304-5024355)
chr5 (4-71)||(11047528-11047595)
chr5 (4-71)||(13362498-13362565)
chr5 (4-71)||(39453391-39453458)
chr5 (4-50)||(38475290-38475336)
chr5 (4-45)||(297279-297320)
chr5 (4-45)||(3529138-3529179)
chr5 (4-45)||(5993980-5994021)
chr5 (4-45)||(6758130-6758171)
chr5 (4-45)||(14194719-14194760)
chr5 (4-45)||(28269684-28269725)
chr5 (4-45)||(28771134-28771175)
chr5 (4-45)||(31482667-31482708)
chr5 (4-45)||(41930607-41930648)
chr5 (4-71)||(10684030-10684097)
chr5 (4-55)||(12904845-12904896)
chr5 (4-42)||(6150545-6150583)
chr5 (4-54)||(24547412-24547462)
chr5 (4-45)||(1506058-1506099)
chr5 (4-45)||(27587239-27587280)
chr5 (4-44)||(186510-186550)
[»] scaffold0008 (1 HSPs)
scaffold0008 (4-71)||(239821-239888)
[»] scaffold0005 (1 HSPs)
scaffold0005 (4-71)||(37833-37900)
[»] chr8 (32 HSPs)
chr8 (4-71)||(16388796-16388863)
chr8 (4-49)||(23698536-23698581)
chr8 (4-69)||(36928567-36928632)
chr8 (3-71)||(30711987-30712055)
chr8 (3-71)||(30719764-30719832)
chr8 (4-70)||(2693787-2693854)
chr8 (4-55)||(4405946-4405997)
chr8 (3-50)||(12199210-12199257)
chr8 (3-50)||(12443638-12443685)
chr8 (4-55)||(13186151-13186202)
chr8 (4-71)||(35756673-35756740)
chr8 (5-55)||(31608799-31608849)
chr8 (4-50)||(38862709-38862755)
chr8 (4-45)||(1425318-1425359)
chr8 (4-45)||(3041721-3041762)
chr8 (4-45)||(23663810-23663851)
chr8 (4-69)||(36186339-36186404)
chr8 (4-45)||(36325325-36325366)
chr8 (4-45)||(38845564-38845605)
chr8 (4-45)||(39071767-39071808)
chr8 (4-45)||(40775915-40775956)
chr8 (4-45)||(44407122-44407163)
chr8 (3-71)||(20385658-20385726)
chr8 (3-71)||(20386700-20386768)
chr8 (3-71)||(30710945-30711013)
chr8 (5-60)||(22890275-22890330)
chr8 (4-45)||(2266583-2266624)
chr8 (4-45)||(8316884-8316925)
chr8 (4-45)||(12273149-12273190)
chr8 (4-45)||(22915654-22915695)
chr8 (4-45)||(35449874-35449915)
chr8 (12-60)||(24085873-24085921)
[»] scaffold0031 (1 HSPs)
scaffold0031 (4-68)||(69056-69120)
[»] scaffold0220 (1 HSPs)
scaffold0220 (4-83)||(23322-23401)
[»] chr6 (18 HSPs)
chr6 (4-71)||(21627983-21628050)
chr6 (4-71)||(30803952-30804019)
chr6 (4-71)||(33517625-33517692)
chr6 (4-71)||(33647054-33647121)
chr6 (4-45)||(12080727-12080768)
chr6 (4-45)||(28000650-28000691)
chr6 (4-45)||(30337540-30337581)
chr6 (3-71)||(679956-680024)
chr6 (4-71)||(30725850-30725917)
chr6 (4-45)||(363095-363136)
chr6 (4-45)||(3059348-3059389)
chr6 (4-45)||(14196880-14196921)
chr6 (4-45)||(17734459-17734500)
chr6 (3-71)||(680998-681066)
chr6 (4-60)||(1215147-1215203)
chr6 (4-60)||(26463270-26463326)
chr6 (4-68)||(28498298-28498362)
chr6 (4-68)||(29810709-29810773)
[»] scaffold0020 (1 HSPs)
scaffold0020 (3-45)||(139762-139804)
[»] scaffold0559 (1 HSPs)
scaffold0559 (4-45)||(1324-1365)
[»] scaffold0024 (1 HSPs)
scaffold0024 (4-45)||(141859-141900)
[»] scaffold0007 (1 HSPs)
scaffold0007 (4-45)||(1860-1901)
[»] scaffold0027 (1 HSPs)
scaffold0027 (4-71)||(14060-14127)
[»] scaffold0295 (1 HSPs)
scaffold0295 (4-45)||(2234-2275)
[»] scaffold0205 (1 HSPs)
scaffold0205 (4-45)||(21234-21275)


Alignment Details
Target: scaffold0347 (Bit Score: 134; Significance: 1e-69; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 14605 - 14440
Alignment:
Q  1 aaattaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggctctgtttattggttaaatgagttgcgaaa 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14605 aaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcactgattagctgacgtggctctgtttattggttaaatgagttgcgaaa 14506  T
Q  101 agaccattatacctctgtgttcatcttctcaaaatcttccctccttcact-acttcacttctctgg 165  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||  | |||||||||||||||    
T  14505 agaccattatacccctgtgtccatcttctcaaaatcttccctccttccttcacttcacttctctgg 14440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 13697 - 13740
Alignment:
Q  1 aaattaatcatttaagatttcgtcactctccccacttaatcact 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  13697 aaattaatcatttaagatttcgtccctctccccacttaatcact 13740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 111; Significance: 5e-56; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 153 - 323
Target Start/End: Complemental strand, 38644553 - 38644382
Alignment:
Q  153 ttcacttctctggaacaccatttcctcccaaaagaacttnnnnnnnnc-ccttgtggttgtggatagaaccatacctacnnnnnnncacatggttttttc 251  Q
    |||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||       ||||||||||||||    
T  38644553 ttcacttctctggaacaccatttcctcccaaaagaacttaaaaaaaaaaccttgtggttgtggatagaaccatacctacaaaaaaacacatggttttttc 38644454  T
Q  252 gctgccattacccaaccctttttcaactacttctccttcaattgatttcctcatcaatatgcagtgcttcat 323  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38644453 gctgccactacccaaccctttttcaactacttctccttcaattgatttcctcatcaatatgcagtgcttcat 38644382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 38644672 - 38644571
Alignment:
Q  1 aaattaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggctctgtttattggttaaatgagttgcgaaa 100  Q
    ||||||||||||||||||||| || ||||||||||||||||||||           ||||||||||||| ||||||||| |||||||||||||||| |||    
T  38644672 aaattaatcatttaagatttcatccctctccccacttaatcactg-----------attagctgacgtgactctgtttaatggttaaatgagttgcaaaa 38644584  T
Q  101 agaccattatacc 113  Q
    |||||||||||||    
T  38644583 agaccattatacc 38644571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 38643638 - 38643692
Alignment:
Q  1 aaattaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact 55  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||| |||||    
T  38643638 aaattaatcatttaagatttcgtccctctccccacttaattactgtcacgtcact 38643692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 43123398 - 43123451
Alignment:
Q  97 gaaaagaccattatacctctgtgttcatcttctcaaaatcttccctccttcact 150  Q
    |||||||||||||||||  |||||||||||||| ||||||||||||||||||||    
T  43123398 gaaaagaccattatacccatgtgttcatcttcttaaaatcttccctccttcact 43123451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 2640515 - 2640448
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| |||||||| |||||||||||||||||||||||  ||||| ||| | |||||||||    
T  2640515 ttaatcatttaaaatttcgtctctctccccacttaatcactgtcatgtcactaatttgatgacgtggc 2640448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 5457244 - 5457177
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| |||||||| |||  |||| |||||||||| ||| |||||||||||||||||||||    
T  5457244 ttaatcatttaaaatttcgtccctcatcccagttaatcactgccacgtcactgattagctgacgtggc 5457177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 32053480 - 32053429
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact 55  Q
    |||||||||||| |||||||| |||||||||||||||||||||||| |||||    
T  32053480 ttaatcatttaaaatttcgtccctctccccacttaatcactgtcacgtcact 32053429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 23181331 - 23181264
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| |||||||| ||||| |||||||||||||||||  ||||| ||| | |||||||||    
T  23181331 ttaatcatttaaaatttcgtccctctctccacttaatcactgtcatgtcactaatttgatgacgtggc 23181264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 24388910 - 24388977
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    ||||||| |||| |||||||| |||||||||||||||||||| ||||||||  ||| | |||||||||    
T  24388910 ttaatcacttaaaatttcgtccctctccccacttaatcactgccacatcaccaatttgatgacgtggc 24388977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 28469345 - 28469278
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| |||||||| |||||||||||||||||||  ||| ||||| ||| | |||||||||    
T  28469345 ttaatcatttaaaatttcgtccctctccccacttaatcactaccacgtcactaatttgatgacgtggc 28469278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 40379860 - 40379927
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| |||||||| ||||||||||||||||| || ||| ||||| ||| | |||||||||    
T  40379860 ttaatcatttaaaatttcgtccctctccccacttaatcaatgccacgtcactaatttgatgacgtggc 40379927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 45915820 - 45915750
Alignment:
Q  1 aaattaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    ||||||||||||||| ||| |||| ||||  ||  |||||||||| ||| |||||||||||||||||||||    
T  45915820 aaattaatcatttaaaattccgtccctctttccgattaatcactgccacgtcactgattagctgacgtggc 45915750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 3914229 - 3914294
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtg 69  Q
    |||||||||||| |||||||| |||| || |||||||||||| ||||||||| ||| | |||||||    
T  3914229 ttaatcatttaaaatttcgtccctcttccaacttaatcactgccacatcactaatttgatgacgtg 3914294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 6571104 - 6571149
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcac 49  Q
    |||||||||||| |||| ||| ||||||||||||||||||||||||    
T  6571104 ttaatcatttaaaattttgtccctctccccacttaatcactgtcac 6571149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 17102111 - 17102152
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  17102111 ttaatcatttaaaatttcgtccctctccccacttaatcactg 17102152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 27396932 - 27396891
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  27396932 ttaatcatttaaaatttcgtccctctccccacttaatcactg 27396891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 27991830 - 27991871
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  27991830 ttaatcatttaaaatttcgtccctctccccacttaatcactg 27991871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 30948466 - 30948425
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  30948466 ttaatcatttaaaatttcgtccctctccccacttaatcactg 30948425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 32680901 - 32680860
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  32680901 ttaatcatttaaaatttcgtccctctccccacttaatcactg 32680860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 42731510 - 42731551
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  42731510 ttaatcatttaaaatttcgtccctctccccacttaatcactg 42731551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 45010941 - 45010900
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  45010941 ttaatcatttaaaatttcgtctctctccccacttaatcactg 45010900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 22539308 - 22539252
Alignment:
Q  26 ctctccccacttaatcactgtcacatcactgattagctgacgtggctctgtttattg 82  Q
    ||||||||||||||||||| |||| ||||| |||||||||||| || ||||| ||||    
T  22539308 ctctccccacttaatcactctcacgtcacttattagctgacgtagcactgttgattg 22539252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 10935885 - 10935952
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| |||||||| ||||| |||||||||||||| ||  ||||| ||| | |||||||||    
T  10935885 ttaatcatttaaaatttcgtccctctctccacttaatcactgccatgtcactaatttgatgacgtggc 10935952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 11397469 - 11397531
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgac 66  Q
    |||||||||||| |||| ||| |||  |||| |||||||||||||| ||||| ||||||||||    
T  11397469 ttaatcatttaaaatttagtctctcatcccaattaatcactgtcacgtcactaattagctgac 11397531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 22871614 - 22871573
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| ||||| || ||||||||||||||||||||    
T  22871614 ttaatcatttaaaatttcttccctctccccacttaatcactg 22871573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 32299042 - 32299001
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    ||||||||| || |||||||| ||||||||||||||||||||    
T  32299042 ttaatcattgaaaatttcgtccctctccccacttaatcactg 32299001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 34928956 - 34928915
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||| ||||| |||||||| ||||||||||||||||||||    
T  34928956 ttaatcgtttaaaatttcgtccctctccccacttaatcactg 34928915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 37656949 - 37657010
Alignment:
Q  10 atttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||| |||||||| |||||||||||||||||| | ||| ||||| ||| | |||||||||    
T  37656949 atttaaaatttcgtccctctccccacttaatcaccggcacgtcactaatttgatgacgtggc 37657010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 39686840 - 39686799
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||| ||||| |||||||| ||||||||||||||||||||    
T  39686840 ttaatcgtttaaaatttcgtccctctccccacttaatcactg 39686799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 45010689 - 45010730
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| ||||||||  |||||||||||||||||||    
T  45010689 ttaatcatttaaaatttcgtccatctccccacttaatcactg 45010730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 2e-40; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 25065970 - 25065858
Alignment:
Q  1 aaattaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggctctgtttattggttaaatgagttgcgaaa 100  Q
    |||||||||||||||||||||||| ||||| |||||||||||||| ||| |||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  25065970 aaattaatcatttaagatttcgtccctctctccacttaatcactgccacctcactgattagctgacgtggctctatttatttgttaaatgagttgcgaaa 25065871  T
Q  101 agaccattatacc 113  Q
    | |||||||||||    
T  25065870 aaaccattatacc 25065858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 34850402 - 34850335
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| ||||| || |||||||||||||||||||| ||| |||||||||||||||||||||    
T  34850402 ttaatcatttaaaatttcatccctctccccacttaatcactgccacgtcactgattagctgacgtggc 34850335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 101 - 150
Target Start/End: Complemental strand, 25065846 - 25065797
Alignment:
Q  101 agaccattatacctctgtgttcatcttctcaaaatcttccctccttcact 150  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25065846 agaccattatacccctgtgttcatcttctcaaaatcttccctccttcact 25065797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 37578530 - 37578462
Alignment:
Q  3 attaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||| ||||| ||| | |||||||||    
T  37578530 attaatcatttaaaatttcgtcactctccccacttaatcactgccacgtcactaatttgatgacgtggc 37578462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 24009878 - 24009811
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||||||||| ||| | |||||||||    
T  24009878 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacatcactaatttgatgacgtggc 24009811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 14879062 - 14879129
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| |||||||| |||||||||||||||||||||||  ||||| ||| | |||||||||    
T  14879062 ttaatcatttaaaatttcgtccctctccccacttaatcactgtcatgtcactaatttgatgacgtggc 14879129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 32917351 - 32917402
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact 55  Q
    |||||||||||| |||||||| |||||||||||||||||||| |||||||||    
T  32917351 ttaatcatttaaaatttcgtctctctccccacttaatcactgccacatcact 32917402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 1841550 - 1841591
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  1841550 ttaatcatttaaaatttcgtcactctccccacttaatcactg 1841591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 6367653 - 6367718
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtg 69  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||| ||||| ||| | |||||||    
T  6367653 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtg 6367718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 1103552 - 1103596
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtca 48  Q
    |||||||||||| |||||||| |||||||||||||||||||||||    
T  1103552 ttaatcatttaaaatttcgtccctctccccacttaatcactgtca 1103596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 4960631 - 4960698
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| |||||||| |||| ||||||||||||||| ||| ||||| ||| | |||||||||    
T  4960631 ttaatcatttaaaatttcgtccctcttcccacttaatcactgccacgtcactaatttgatgacgtggc 4960698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 40210707 - 40210656
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact 55  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||| |||||    
T  40210707 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcact 40210656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 46163121 - 46163188
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| |||||||| ||||||||||||||| |||||||  ||||| ||| | |||||||||    
T  46163121 ttaatcatttaaaatttcgtctctctccccacttaattactgtcatgtcactaatttgatgacgtggc 46163188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 48691242 - 48691293
Alignment:
Q  7 atcatttaagatttcgtcactctccccacttaatcactgtcacatcactgat 58  Q
    ||||||||| |||| |||||||||||||||||||||||| ||| ||||||||    
T  48691242 atcatttaaaattttgtcactctccccacttaatcactgccacgtcactgat 48691293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 10304014 - 10304060
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcaca 50  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||||    
T  10304014 ttaatcatttaaaatttcgtccctctccccacttaatcactgccaca 10304060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 10304192 - 10304146
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcaca 50  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||||    
T  10304192 ttaatcatttaaaatttcgtctctctccccacttaatcactgccaca 10304146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 25065021 - 25065075
Alignment:
Q  1 aaattaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact 55  Q
    |||||||||||||||||||||||| |||||| ||||| ||||||| ||| |||||    
T  25065021 aaattaatcatttaagatttcgtccctctcctcacttgatcactgccacgtcact 25065075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 31514624 - 31514582
Alignment:
Q  3 attaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    ||||||||||||| |||||||| ||||||||||||||||||||    
T  31514624 attaatcatttaaaatttcgtccctctccccacttaatcactg 31514582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 34849102 - 34849160
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagc 62  Q
    |||||||||||| |||||||| |||||||| ||||||||||| ||| |||| |||||||    
T  34849102 ttaatcatttaaaatttcgtccctctcccctcttaatcactgccacgtcaccgattagc 34849160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 183528 - 183487
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  183528 ttaatcatttaaaatttcgtccctctccccacttaatcactg 183487  T

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Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 4716774 - 4716733
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  4716774 ttaatcatttaaaatttcgtctctctccccacttaatcactg 4716733  T

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Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 13914404 - 13914339
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtg 69  Q
    |||||||||||| |||||||| ||||||||||| |||||||| ||| ||||| ||| | |||||||    
T  13914404 ttaatcatttaaaatttcgtccctctccccactaaatcactgccacgtcactaatttgatgacgtg 13914339  T

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Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 24905473 - 24905432
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  24905473 ttaatcatttaaaatttcgtccctctccccacttaatcactg 24905432  T

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Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 25647975 - 25648016
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  25647975 ttaatcatttaaaatttcgtccctctccccacttaatcactg 25648016  T

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Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 28011454 - 28011495
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  28011454 ttaatcatttaaaatttcgtccctctccccacttaatcactg 28011495  T

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Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 33442900 - 33442859
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  33442900 ttaatcatttaaaatttcgtccctctccccacttaatcactg 33442859  T

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Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 36694585 - 36694544
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  36694585 ttaatcatttaaaatttcgtctctctccccacttaatcactg 36694544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 36710686 - 36710645
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  36710686 ttaatcatttaaaatttcgtctctctccccacttaatcactg 36710645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 42248564 - 42248605
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  42248564 ttaatcatttaaaatttcgtccctctccccacttaatcactg 42248605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 9443663 - 9443731
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact-gattagctgacgtggc 71  Q
    |||||||||||| |||| ||| ||| ||||||||||||| |||||  ||||| ||||||||||||||||    
T  9443663 ttaatcatttaaaatttggtccctccccccacttaatcattgtcaagtcactagattagctgacgtggc 9443731  T

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Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 13245941 - 13245997
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgatta 60  Q
    ||||||| |||| |||| ||| |||||||||||||||||||||||| ||||| ||||    
T  13245941 ttaatcacttaaaattttgtccctctccccacttaatcactgtcacgtcactaatta 13245997  T

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Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 42267394 - 42267434
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcact 44  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  42267394 ttaatcatttaatatttcgtctctctccccacttaatcact 42267434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 17662187 - 17662136
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact 55  Q
    |||||||||||| |||||||| |||| ||||||||||||||| ||| |||||    
T  17662187 ttaatcatttaaaatttcgtccctcttcccacttaatcactgccacgtcact 17662136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 27999188 - 27999121
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||| | |||||||| |||| ||||||||||||||| ||| ||||| ||| ||||| |||||    
T  27999188 ttaatcattttaaatttcgtctctcttcccacttaatcactgccacctcactaatttgctgatgtggc 27999121  T

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Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 40772598 - 40772637
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcac 43  Q
    |||||||||||| |||||||| ||||||||||||||||||    
T  40772598 ttaatcatttaaaatttcgtccctctccccacttaatcac 40772637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 41098824 - 41098891
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| |||| ||| | |||||||||||||||||  ||||||||| ||| | |||||||||    
T  41098824 ttaatcatttaaaattttgtccccctccccacttaatcactaccacatcactaatttgatgacgtggc 41098891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 43758913 - 43758980
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| |||||||| ||||| |||||||||||||| ||  ||||| ||| | |||||||||    
T  43758913 ttaatcatttaaaatttcgtccctctctccacttaatcactgccatgtcactaatttgatgacgtggc 43758980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 44523473 - 44523406
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| ||||| || ||| |  ||||||||||||| ||| ||||| |||||||||||||||    
T  44523473 ttaatcatttaaaatttcatccctcccttcacttaatcactgccacgtcactaattagctgacgtggc 44523406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 16970872 - 16970834
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatca 42  Q
    |||||||||||| |||||||| |||||||||||||||||    
T  16970872 ttaatcatttaaaatttcgtccctctccccacttaatca 16970834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 19017966 - 19017901
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtg 69  Q
    |||||||||||| |||| ||| |||| ||||||||||||||| | ||||||| ||| | |||||||    
T  19017966 ttaatcatttaaaattttgtccctcttcccacttaatcactgccgcatcactaatttgatgacgtg 19017901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 19515910 - 19515951
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    ||||| |||||| |||||||| ||||||||||||||||||||    
T  19515910 ttaattatttaaaatttcgtccctctccccacttaatcactg 19515951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 26024514 - 26024555
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| | |||||| ||||||||||||||||||||    
T  26024514 ttaatcatttaaaagttcgtccctctccccacttaatcactg 26024555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 30711418 - 30711459
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||| ||||||||||||||||    
T  30711418 ttaatcatttaaaatttcgtccctcgccccacttaatcactg 30711459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 34464786 - 34464745
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||| ||| ||||||||||||||||||||    
T  34464786 ttaatcatttaaaattttgtccctctccccacttaatcactg 34464745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 35152434 - 35152475
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||| ||| ||||||||||||||||||||    
T  35152434 ttaatcatttaaaattttgtccctctccccacttaatcactg 35152475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 47999429 - 47999388
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| || ||||| ||||||||||||||||||||    
T  47999429 ttaatcatttaaaatatcgtccctctccccacttaatcactg 47999388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 52134159 - 52134200
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||| ||||| |||||||| ||||||||||||||||||||    
T  52134159 ttaatcgtttaaaatttcgtccctctccccacttaatcactg 52134200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 21444685 - 21444741
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgatta 60  Q
    ||||||| |||| ||||||||  ||||||||||||||||||| ||| ||||| ||||    
T  21444685 ttaatcacttaaaatttcgtccatctccccacttaatcactgccacgtcactaatta 21444741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 22103843 - 22103787
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgatta 60  Q
    ||||||| |||| |||||||| ||||| |||||||||||||| ||| ||||| ||||    
T  22103843 ttaatcacttaaaatttcgtccctctctccacttaatcactgccacgtcactaatta 22103787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 35152681 - 35152613
Alignment:
Q  3 attaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    ||||||||||||| ||||||||  |   || |||||||||||||||||||||| ||| | |||||||||    
T  35152681 attaatcatttaaaatttcgtcctttgaccaacttaatcactgtcacatcactaattcgatgacgtggc 35152613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 1e-19; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 48528563 - 48528628
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtg 69  Q
    |||||||||||| |||||||  || |||||||||||||||||||||||||||||||||||||||||    
T  48528563 ttaatcatttaaaatttcgttcctatccccacttaatcactgtcacatcactgattagctgacgtg 48528628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 16605692 - 16605760
Alignment:
Q  3 attaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    ||||||||||||| |||||||| ||| |||||||||||||||| ||| ||||| |||||||||||||||    
T  16605692 attaatcatttaaaatttcgtccctccccccacttaatcactgccacgtcactaattagctgacgtggc 16605760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 35028335 - 35028268
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||| ||||| ||| | |||||||||    
T  35028335 ttaatcatttaaaatttcgtcactctccccacttaatcactgccacgtcactaatttgatgacgtggc 35028268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 14801827 - 14801894
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||| ||||| ||| | |||||||||    
T  14801827 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtggc 14801894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 54435433 - 54435347
Alignment:
Q  5 taatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggctctgtttattggttaaatga 91  Q
    |||| |||||| |||||||| |||| ||| ||||||||||  ||||||||| |||||||||||| || ||||| |||||| ||||||    
T  54435433 taattatttaaaatttcgtccctcttcccccttaatcactaacacatcactaattagctgacgtcgcactgttaattggtcaaatga 54435347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 37976490 - 37976449
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  37976490 ttaatcatttaaaatttcgtcactctccccacttaatcactg 37976449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 50418974 - 50418929
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcac 49  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||    
T  50418974 ttaatcatttaaaatttcgtccctctccccacttaatcactgtcac 50418929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 17356256 - 17356208
Alignment:
Q  7 atcatttaagatttcgtcactctccccacttaatcactgtcacatcact 55  Q
    ||||||||| |||||||| |||||||||||||||||||||||| |||||    
T  17356256 atcatttaaaatttcgtccctctccccacttaatcactgtcacgtcact 17356208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 15508010 - 15507943
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| |||||||| |||||||||||||||||||| | | ||||| ||| | |||||||||    
T  15508010 ttaatcatttaaaatttcgtctctctccccacttaatcactgccgcgtcactaatttgatgacgtggc 15507943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 34765717 - 34765666
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact 55  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||| |||||    
T  34765717 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcact 34765666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 52298117 - 52298168
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact 55  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||| |||||    
T  52298117 ttaatcatttaaaatttcgtctctctccccacttaatcactgccacgtcact 52298168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 4983033 - 4982991
Alignment:
Q  3 attaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    ||||||||||||| |||||||| ||||||||||||||||||||    
T  4983033 attaatcatttaaaatttcgtccctctccccacttaatcactg 4982991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 16005929 - 16005975
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcaca 50  Q
    |||||||||||| |||||||| ||||||| |||||||||||||||||    
T  16005929 ttaatcatttaaaatttcgtccctctccctacttaatcactgtcaca 16005975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 44967375 - 44967329
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcaca 50  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||||    
T  44967375 ttaatcatttaaaatttcgtccctctccccacttaatcactgccaca 44967329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 48529913 - 48529855
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagc 62  Q
    |||||||||||| |||| ||| ||||| |||||||||||||| ||| ||||||||||||    
T  48529913 ttaatcatttaaaattttgtccctctctccacttaatcactgccacgtcactgattagc 48529855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 53129836 - 53129778
Alignment:
Q  11 tttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtg 69  Q
    ||||| |||||||| |||||||||||||||||||| ||||||||| ||| | |||||||    
T  53129836 tttaaaatttcgtccctctccccacttaatcactgccacatcactaatttgatgacgtg 53129778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 53701903 - 53701969
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtgg 70  Q
    |||||||||||| ||||| || |||||||||||||||||||| ||| ||||| ||| | ||||||||    
T  53701903 ttaatcatttaaaatttcttccctctccccacttaatcactgccacgtcactaatttgatgacgtgg 53701969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 9145072 - 9145031
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  9145072 ttaatcatttaaaatttcgtccctctccccacttaatcactg 9145031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 13058128 - 13058169
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  13058128 ttaatcatttaaaatttcgtccctctccccacttaatcactg 13058169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 18831440 - 18831481
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  18831440 ttaatcatttaaaatttcgtctctctccccacttaatcactg 18831481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 23613400 - 23613441
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  23613400 ttaatcatttaaaatttcgtccctctccccacttaatcactg 23613441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 27934623 - 27934664
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  27934623 ttaatcatttaaaatttcgtccctctccccacttaatcactg 27934664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 32950233 - 32950274
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  32950233 ttaatcatttaaaatttcgtctctctccccacttaatcactg 32950274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 36009150 - 36009109
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  36009150 ttaatcatttaaaatttcgtccctctccccacttaatcactg 36009109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 37248327 - 37248368
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  37248327 ttaatcatttaaaatttcgtcgctctccccacttaatcactg 37248368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 42738337 - 42738296
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  42738337 ttaatcatttaaaatttcgtccctctccccacttaatcactg 42738296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 43155833 - 43155792
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  43155833 ttaatcatttaaaatttcgtccctctccccacttaatcactg 43155792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 49879513 - 49879472
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  49879513 ttaatcatttaaaatttcgtccctctccccacttaatcactg 49879472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 10781822 - 10781770
Alignment:
Q  3 attaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact 55  Q
    ||||||||||||| |||||||| ||||||||| |||| ||||||||| |||||    
T  10781822 attaatcatttaaaatttcgtccctctccccagttaaccactgtcacgtcact 10781770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 24349764 - 24349816
Alignment:
Q  3 attaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact 55  Q
    ||||||||||||| |||||||| ||||||||| |||||||||| ||| |||||    
T  24349764 attaatcatttaaaatttcgtccctctccccagttaatcactgccacgtcact 24349816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 24711202 - 24711242
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcact 44  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  24711202 ttaatcatttaaaatttcgtccctctccccacttaatcact 24711242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 54087032 - 54086992
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcact 44  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  54087032 ttaatcatttaaaatttcgtctctctccccacttaatcact 54086992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 5369038 - 5369079
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||| ||| ||||||||||||||||||||    
T  5369038 ttaatcatttaaaattttgtccctctccccacttaatcactg 5369079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 9400825 - 9400784
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| ||||| || ||||||||||||||||||||    
T  9400825 ttaatcatttaaaatttcatccctctccccacttaatcactg 9400784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 22566890 - 22566931
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| ||||| || ||||||||||||||||||||    
T  22566890 ttaatcatttaaaatttcatccctctccccacttaatcactg 22566931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 33247579 - 33247538
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| ||||| || ||||||||||||||||||||    
T  33247579 ttaatcatttaaaatttcatccctctccccacttaatcactg 33247538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 34837380 - 34837339
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||| ||||| |||||||| ||||||||||||||||||||    
T  34837380 ttaatcgtttaaaatttcgtccctctccccacttaatcactg 34837339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 35508577 - 35508536
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||  ||||||||||||||||||||    
T  35508577 ttaatcatttaaaatttcgtatctctccccacttaatcactg 35508536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 38012261 - 38012302
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||| ||||| |||||||| ||||||||||||||||||||    
T  38012261 ttaatcgtttaaaatttcgtctctctccccacttaatcactg 38012302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 52909344 - 52909385
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| ||||||||  |||||||||||||||||||    
T  52909344 ttaatcatttaaaatttcgtccatctccccacttaatcactg 52909385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 55866333 - 55866386
Alignment:
Q  98 aaaagaccattatacctctgtgttca-tcttctcaaaatcttccctccttcact 150  Q
    |||||||||| |||||  |||||||| |||||| ||||||||||||||||||||    
T  55866333 aaaagaccatcatacccatgtgttcaatcttcttaaaatcttccctccttcact 55866386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 51692644 - 51692688
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtca 48  Q
    ||||||| |||| |||||||| |||||||||||| ||||||||||    
T  51692644 ttaatcacttaaaatttcgtccctctccccacttgatcactgtca 51692688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 5e-16; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 33156331 - 33156264
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| |||||||| ||| |||||||||||||||| ||| ||||| |||||||||||||||    
T  33156331 ttaatcatttaaaatttcgtccctccccccacttaatcactgccacgtcactaattagctgacgtggc 33156264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 23458316 - 23458251
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtg 69  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||||||||| ||| | |||||||    
T  23458316 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacatcactaatttgatgacgtg 23458251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 9294295 - 9294228
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| |||||||| |||||||||||||||||||||||  ||||| ||| | |||||||||    
T  9294295 ttaatcatttaaaatttcgtccctctccccacttaatcactgtcatgtcactaatttgatgacgtggc 9294228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 26463935 - 26463884
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact 55  Q
    |||||||||||| |||||||| |||||||||||||||||||||||| |||||    
T  26463935 ttaatcatttaaaatttcgtccctctccccacttaatcactgtcacgtcact 26463884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 33689716 - 33689649
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||| ||||| ||| | |||||||||    
T  33689716 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaattcgatgacgtggc 33689649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 43384374 - 43384441
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| |||||||| |||||||||||||||||||||||  ||||| ||| | |||||||||    
T  43384374 ttaatcatttaaaatttcgtctctctccccacttaatcactgtcatgtcactaatttgatgacgtggc 43384441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 19741229 - 19741188
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  19741229 ttaatcatttaaaatttcgtcactctccccacttaatcactg 19741188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 40758235 - 40758302
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| |||||||| |||||||||||||||||||  ||| ||||| ||| | |||||||||    
T  40758235 ttaatcatttaaaatttcgtccctctccccacttaatcactaccacgtcactaatttgatgacgtggc 40758302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 41988053 - 41988104
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact 55  Q
    |||||||||||| |||||||| |||||| ||||||||||||| |||||||||    
T  41988053 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacatcact 41988104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 40033793 - 40033747
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcaca 50  Q
    |||||||||||| |||| ||| |||||||||||||||||||||||||    
T  40033793 ttaatcatttaaaattttgtccctctccccacttaatcactgtcaca 40033747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 51994223 - 51994173
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcac 54  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||| ||||    
T  51994223 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcac 51994173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 2796270 - 2796311
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  2796270 ttaatcatttaaaatttcgtccctctccccacttaatcactg 2796311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 8041707 - 8041748
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  8041707 ttaatcatttaaaatttcgtccctctccccacttaatcactg 8041748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 10770797 - 10770756
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  10770797 ttaatcatttaaaatttcgtccctctccccacttaatcactg 10770756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 21783621 - 21783666
Alignment:
Q  97 gaaaagaccattatacctctgtgttcatcttctcaaaatcttccct 142  Q
    |||||||||||||||||  |||||||||||||| ||||||||||||    
T  21783621 gaaaagaccattatacccatgtgttcatcttcttaaaatcttccct 21783666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 36314604 - 36314563
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  36314604 ttaatcatttaaaatttcgtccctctccccacttaatcactg 36314563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 48322683 - 48322642
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  48322683 ttaatcatttaaaatttcgtccctctccccacttaatcactg 48322642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 54466514 - 54466555
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  54466514 ttaatcatttaaaatttcgtccctctccccacttaatcactg 54466555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 40506124 - 40506080
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtca 48  Q
    |||||||||||| |||||||| |||||| ||||||||||||||||    
T  40506124 ttaatcatttaaaatttcgtctctctccgcacttaatcactgtca 40506080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 25108432 - 25108365
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| ||||||||  ||  | || |||||||||| ||| |||||||||||||||||||||    
T  25108432 ttaatcatttaaaatttcgtccttcatcacagttaatcactgccacgtcactgattagctgacgtggc 25108365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 25107304 - 25107370
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtgg 70  Q
    |||||||||||| |||||||| |||  | || |||||||||| ||| ||| ||||||||||||||||    
T  25107304 ttaatcatttaaaatttcgtccctcatcacagttaatcactgccacgtcagtgattagctgacgtgg 25107370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 44654840 - 44654790
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcac 54  Q
    ||||||| |||| |||||||| ||||||||| |||||||||||||| ||||    
T  44654840 ttaatcacttaaaatttcgtccctctccccatttaatcactgtcacgtcac 44654790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 46474906 - 46474947
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||| ||| ||||||||||||||||||||    
T  46474906 ttaatcatttaaaattttgtccctctccccacttaatcactg 46474947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 20704664 - 20704608
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgatta 60  Q
    ||||||| |||| |||||||| |||| ||||||||||||| ||||| ||||| ||||    
T  20704664 ttaatcacttaaaatttcgtccctcttcccacttaatcacagtcacgtcactaatta 20704608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 55052585 - 55052545
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcact 44  Q
    |||||||||||| |||||||| ||||||||| |||||||||    
T  55052585 ttaatcatttaaaatttcgtccctctccccatttaatcact 55052545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 36755184 - 36755249
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtg 69  Q
    |||||||||||| |||||||| |||||||||||||||||||||||| ||||| ||| | |||||||    
T  36755184 ttaatcatttaaaatttcgtctctctccccacttaatcactgtcacgtcactaatttgatgacgtg 36755249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 37895684 - 37895619
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtg 69  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||| ||||| ||| | |||||||    
T  37895684 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtg 37895619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 11721427 - 11721371
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgatta 60  Q
    ||||||| |||| |||||||| |||||||||||||||||||||||| ||||| ||||    
T  11721427 ttaatcacttaaaatttcgtctctctccccacttaatcactgtcacgtcactaatta 11721371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 15848179 - 15848230
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact 55  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||| |||||    
T  15848179 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcact 15848230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 25893555 - 25893468
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggctctgtttattggttaaatga 91  Q
    |||||||||||| | |||||  |||||||| ||||||||||| ||| || || ||||||||||||||| ||||| ||| || ||||||    
T  25893555 ttaatcatttaaaaattcgtttctctccccccttaatcactgccacgtccctaattagctgacgtggcgctgttaattagtcaaatga 25893468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 36382252 - 36382319
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| ||||| || |||||||||||||||||||| ||| ||||| ||| | |||||||||    
T  36382252 ttaatcatttaaaatttcatccctctccccacttaatcactgccacgtcactaatttgatgacgtggc 36382319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 39423606 - 39423673
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||  ||||| ||| | |||||||||    
T  39423606 ttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcactaatttgatgacgtggc 39423673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 17266489 - 17266535
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcaca 50  Q
    |||||||||||| |||| ||| |||||||||||||||||||||||||    
T  17266489 ttaatcatttaaaatttggtccctctccccacttaatcactgtcaca 17266535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 1696046 - 1696001
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcac 49  Q
    |||||| ||||| |||||||| ||||||||||||||||||||||||    
T  1696046 ttaatcgtttaaaatttcgtccctctccccacttaatcactgtcac 1696001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 6657969 - 6658010
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  6657969 ttaatcatttaaaatttcgtccctctccccacttaatcactg 6658010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 10840567 - 10840624
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattag 61  Q
    ||||||||||||  ||||||| |||| ||||||||||||||||||| ||||| |||||    
T  10840567 ttaatcatttaaactttcgtccctcttcccacttaatcactgtcacgtcactaattag 10840624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 11163360 - 11163319
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  11163360 ttaatcatttaaaatttcgtccctctccccacttaatcactg 11163319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 14900789 - 14900748
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  14900789 ttaatcatttaaaatttcgtccctctccccacttaatcactg 14900748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 16099146 - 16099187
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  16099146 ttaatcatttaaaatttcgtccctctccccacttaatcactg 16099187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 33739794 - 33739835
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  33739794 ttaatcatttaaaatttcgtccctctccccacttaatcactg 33739835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 34447904 - 34447968
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtg 69  Q
    ||||| |||||| |||||||| |||||||||||||||||||| ||||||||| ||| | |||||||    
T  34447904 ttaataatttaa-atttcgtctctctccccacttaatcactgccacatcactaatttgatgacgtg 34447968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 39498401 - 39498442
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  39498401 ttaatcatttaaaatttcgtccctctccccacttaatcactg 39498442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 44714098 - 44714057
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  44714098 ttaatcatttaaaatttcgtccctctccccacttaatcactg 44714057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 6573656 - 6573719
Alignment:
Q  28 ctccccacttaatcactgtcacatcactgattagctgacgtggctctgtttattggttaaatga 91  Q
    |||||| ||||||||||| ||| || || ||||||||||||||| ||||| |||||| ||||||    
T  6573656 ctccccccttaatcactgccacgtccctaattagctgacgtggcgctgttaattggtcaaatga 6573719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 10712814 - 10712881
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| ||||| || |||||||||||||||||||  ||| ||||| ||| | |||||||||    
T  10712814 ttaatcatttaaaatttcatccctctccccacttaatcactaccacgtcactaatttgatgacgtggc 10712881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 17266667 - 17266624
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtc 47  Q
    |||||||||||| ||||||||| |||||||||||||||| ||||    
T  17266667 ttaatcatttaaaatttcgtcattctccccacttaatcattgtc 17266624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 2318249 - 2318314
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtg 69  Q
    |||||||||||| |||||||| ||||||||||||||| | || ||| ||||| ||| | |||||||    
T  2318249 ttaatcatttaaaatttcgtccctctccccacttaattaatgccacgtcactaatttgatgacgtg 2318314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 6573137 - 6573182
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcac 49  Q
    |||||||||||| | |||||| |||||||| |||||||||||||||    
T  6573137 ttaatcatttaaaaattcgtccctctccccccttaatcactgtcac 6573182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 13995979 - 13995938
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||| ||||| |||||||| ||||||||||||||||||||    
T  13995979 ttaatcgtttaaaatttcgtccctctccccacttaatcactg 13995938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 33062356 - 33062315
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||  |||||||| ||||||||||||||||||||    
T  33062356 ttaatcatttataatttcgtccctctccccacttaatcactg 33062315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 36479809 - 36479850
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| ||||||||  |||||||||||||||||||    
T  36479809 ttaatcatttaaaatttcgtccatctccccacttaatcactg 36479850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 41248865 - 41248824
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||| ||||| |||||||| ||||||||||||||||||||    
T  41248865 ttaatcgtttaaaatttcgtccctctccccacttaatcactg 41248824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 11689632 - 11689688
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgatta 60  Q
    ||||||| |||| ||||||||  ||||||||||||||||||| ||| ||||| ||||    
T  11689632 ttaatcacttaaaatttcgtccatctccccacttaatcactgccacgtcactaatta 11689688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 25624445 - 25624393
Alignment:
Q  1 aaattaatcatttaagatttcgtcactctccccacttaatcactgtcacatca 53  Q
    ||||||||||||||| |||||||| |||| |||  |||||||||| |||||||    
T  25624445 aaattaatcatttaaaatttcgtccctctacccggttaatcactgccacatca 25624393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 44044204 - 44044272
Alignment:
Q  3 attaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    ||||||||||||| |||||||| ||   |||| ||||| |||| ||| |||||||||||||||| ||||    
T  44044204 attaatcatttaaaatttcgtccctgagcccaattaattactgccacgtcactgattagctgacatggc 44044272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 14849044 - 14848976
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact-gattagctgacgtggc 71  Q
    |||||||||||| |||| ||| ||| |||||||||||||||| ||||||||| ||||||||||||||||    
T  14849044 ttaatcatttaaaatttggtccctcaccccacttaatcactgccacatcactagattagctgacgtggc 14848976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 13962955 - 13963022
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| |||||||| |||||| ||||||||||||||||| ||||| ||| | |||||||||    
T  13962955 ttaatcatttaaaatttcgtccctctcctcacttaatcactgtcacgtcactaatttgatgacgtggc 13963022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 19892645 - 19892578
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| ||||||||| ||||||||||||||||||| ||| ||||| ||| | |||||||||    
T  19892645 ttaatcatttaaaatttcgtcattctccccacttaatcactgccacgtcactaatttgatgacgtggc 19892578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 35512239 - 35512290
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact 55  Q
    |||||||||||| |||||||| |||||||||||||||||||| |||||||||    
T  35512239 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacatcact 35512290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 38442159 - 38442226
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||||| ||| ||| | |||||||||    
T  38442159 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacataactaatttgatgacgtggc 38442226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 29646699 - 29646634
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtg 69  Q
    |||||||||||| |||||||| |||||||||||||||||||||||  ||||| ||| | |||||||    
T  29646699 ttaatcatttaaaatttcgtccctctccccacttaatcactgtcatgtcactaatttgatgacgtg 29646634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 32242333 - 32242398
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtg 69  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||| ||||| ||| | |||||||    
T  32242333 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtg 32242398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 8322495 - 8322539
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtca 48  Q
    |||||||||||| |||||||| |||||||||||||||||||||||    
T  8322495 ttaatcatttaaaatttcgtccctctccccacttaatcactgtca 8322539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 35920521 - 35920477
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtca 48  Q
    |||||||||||| |||||||| |||||||||||||||||||||||    
T  35920521 ttaatcatttaaaatttcgtccctctccccacttaatcactgtca 35920477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 5024355 - 5024304
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact 55  Q
    |||||||||||| |||||||  |||||||||||||||||||| |||||||||    
T  5024355 ttaatcatttaaaatttcgttcctctccccacttaatcactgccacatcact 5024304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 11047528 - 11047595
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||  ||||| ||| | |||||||||    
T  11047528 ttaatcatttaaaatttcgtctctctccccacttaatcactgccatgtcactaatttgatgacgtggc 11047595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 13362565 - 13362498
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| |||| ||| ||||||||||||||||||||  |||||||| ||| | |||||||||    
T  13362565 ttaatcatttaaaatttagtctctctccccacttaatcactgctacatcactaatttgatgacgtggc 13362498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 39453391 - 39453458
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||  ||||| ||| | |||||||||    
T  39453391 ttaatcatttaaaatttcgtccctctccccacttaatcactggcatgtcactaatttgatgacgtggc 39453458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 38475336 - 38475290
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcaca 50  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||||    
T  38475336 ttaatcatttaaaatttcgtccctctccccacttaatcactgccaca 38475290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 297320 - 297279
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  297320 ttaatcatttaaaatttcgtccctctccccacttaatcactg 297279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 3529179 - 3529138
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  3529179 ttaatcatttaaaatttcgtccctctccccacttaatcactg 3529138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 5993980 - 5994021
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  5993980 ttaatcatttaaaatttcgtccctctccccacttaatcactg 5994021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 6758171 - 6758130
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  6758171 ttaatcatttaaaatttcgtccctctccccacttaatcactg 6758130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 14194760 - 14194719
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  14194760 ttaatcatttaaaatttcgtccctctccccacttaatcactg 14194719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 28269725 - 28269684
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  28269725 ttaatcatttaaaatttcgtccctctccccacttaatcactg 28269684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 28771175 - 28771134
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  28771175 ttaatcatttaaaatttcgtccctctccccacttaatcactg 28771134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 31482708 - 31482667
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  31482708 ttaatcatttaaaatttcgtccctctccccacttaatcactg 31482667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 41930607 - 41930648
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  41930607 ttaatcatttaaaatttcgtccctctccccacttaatcactg 41930648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 10684030 - 10684097
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| |||| |||||| ||| ||||||||||||||||  ||||| ||| | |||||||||    
T  10684030 ttaatcatttaaaattttgtcactttcctcacttaatcactgtcatgtcactaatttgatgacgtggc 10684097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 12904845 - 12904896
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact 55  Q
    ||||| |||||| |||||||| ||||||||||||||||| |||||| |||||    
T  12904845 ttaataatttaaaatttcgtccctctccccacttaatcaatgtcacgtcact 12904896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 6150545 - 6150583
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatca 42  Q
    |||||||||||| |||||||| |||||||||||||||||    
T  6150545 ttaatcatttaaaatttcgtccctctccccacttaatca 6150583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 24547462 - 24547412
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcac 54  Q
    |||||||||||| |||||||| |||||||||||||| ||||| ||| ||||    
T  24547462 ttaatcatttaaaatttcgtccctctccccacttaaccactgccacgtcac 24547412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 1506058 - 1506099
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||| ||||| |||||||| ||||||||||||||||||||    
T  1506058 ttaatcgtttaaaatttcgtccctctccccacttaatcactg 1506099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 27587239 - 27587280
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||| ||||||||||    
T  27587239 ttaatcatttaaaatttcgtccctctccccatttaatcactg 27587280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 186510 - 186550
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcact 44  Q
    |||||||||||| |||||||| ||| |||||||||||||||    
T  186510 ttaatcatttaaaatttcgtccctccccccacttaatcact 186550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 239888 - 239821
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| |||||||| ||   |||||||||| |||| |||||||||||||||||||||||||    
T  239888 ttaatcatttaaaatttcgtccctacacccacttaattactgccacatcactgattagctgacgtggc 239821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 37900 - 37833
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||| ||||| ||| | |||||||||    
T  37900 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtggc 37833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 16388863 - 16388796
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||| ||||| ||| | |||||||||    
T  16388863 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtggc 16388796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 23698581 - 23698536
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcac 49  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||    
T  23698581 ttaatcatttaaaatttcgtccctctccccacttaatcactgtcac 23698536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 36928567 - 36928632
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtg 69  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||| ||||| ||| | |||||||    
T  36928567 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtg 36928632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 30712055 - 30711987
Alignment:
Q  3 attaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    ||||||||||||| |||||||| ||   |||| ||||| |||| |||||||||||||||||||||||||    
T  30712055 attaatcatttaaaatttcgtccctgaacccagttaattactgccacatcactgattagctgacgtggc 30711987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 30719832 - 30719764
Alignment:
Q  3 attaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    ||||||||||||| |||||||| ||   |||| ||||| |||| |||||||||||||||||||||||||    
T  30719832 attaatcatttaaaatttcgtccctgaacccagttaattactgccacatcactgattagctgacgtggc 30719764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 2693854 - 2693787
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact-gattagctgacgtgg 70  Q
    |||||||||||| |||| || |||| |||||||||||||||||||| ||||| |||||| ||||||||    
T  2693854 ttaatcatttaaaatttggttactccccccacttaatcactgtcacgtcactagattagatgacgtgg 2693787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 4405997 - 4405946
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact 55  Q
    |||||||||||| |||||||| |||| ||||||||||||||||||| |||||    
T  4405997 ttaatcatttaaaatttcgtccctcttcccacttaatcactgtcacgtcact 4405946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 12199257 - 12199210
Alignment:
Q  3 attaatcatttaagatttcgtcactctccccacttaatcactgtcaca 50  Q
    ||||||||||||| |||||||| |||||||||||||||||||| ||||    
T  12199257 attaatcatttaaaatttcgtctctctccccacttaatcactgccaca 12199210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 12443685 - 12443638
Alignment:
Q  3 attaatcatttaagatttcgtcactctccccacttaatcactgtcaca 50  Q
    ||||||||||||| |||||||| |||||||||||||||||||| ||||    
T  12443685 attaatcatttaaaatttcgtctctctccccacttaatcactgccaca 12443638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 13186151 - 13186202
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact 55  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||| |||||    
T  13186151 ttaatcatttaaaatttcgtctctctccccacttaatcactgccacgtcact 13186202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 35756673 - 35756740
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||  ||||| ||| | |||||||||    
T  35756673 ttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcactaatttgatgacgtggc 35756740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 31608849 - 31608799
Alignment:
Q  5 taatcatttaagatttcgtcactctccccacttaatcactgtcacatcact 55  Q
    ||||||||||| |||||||| |||||||||||||||||||| ||| |||||    
T  31608849 taatcatttaaaatttcgtccctctccccacttaatcactgccacgtcact 31608799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 38862709 - 38862755
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcaca 50  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||||    
T  38862709 ttaatcatttaaaatttcgtccctctccccacttaatcactgccaca 38862755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 1425359 - 1425318
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  1425359 ttaatcatttaaaatttcgtccctctccccacttaatcactg 1425318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 3041762 - 3041721
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  3041762 ttaatcatttaaaatttcgtccctctccccacttaatcactg 3041721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 23663851 - 23663810
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  23663851 ttaatcatttaaaatttcgtccctctccccacttaatcactg 23663810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 36186404 - 36186339
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtg 69  Q
    |||||||||||| |||||||| ||||||| |||||||||||| ||||| ||| ||| | |||||||    
T  36186404 ttaatcatttaaaatttcgtccctctccctacttaatcactgccacattactaatttgatgacgtg 36186339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 36325325 - 36325366
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  36325325 ttaatcatttaaaatttcgtccctctccccacttaatcactg 36325366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 38845605 - 38845564
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  38845605 ttaatcatttaaaatttcgtccctctccccacttaatcactg 38845564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 39071767 - 39071808
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  39071767 ttaatcatttaaaatttcgtccctctccccacttaatcactg 39071808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 40775956 - 40775915
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  40775956 ttaatcatttaaaatttcgtccctctccccacttaatcactg 40775915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 44407163 - 44407122
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  44407163 ttaatcatttaaaatttcgtccctctccccacttaatcactg 44407122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 20385658 - 20385726
Alignment:
Q  3 attaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    ||||||||||||| |||||||| ||   |||| ||||| |||| ||| |||||||||||||||||||||    
T  20385658 attaatcatttaaaatttcgtccctgagcccagttaattactgccacgtcactgattagctgacgtggc 20385726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 20386768 - 20386700
Alignment:
Q  3 attaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    ||||||||||||| |||||||| ||   |||| ||||  |||| |||||||||||||||||||||||||    
T  20386768 attaatcatttaaaatttcgtccctgagcccagttaactactgccacatcactgattagctgacgtggc 20386700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 30710945 - 30711013
Alignment:
Q  3 attaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    ||||||||||||| |||||||| ||   |||| ||||| |||||||| ||||||||||| |||||||||    
T  30710945 attaatcatttaaaatttcgtccctgagcccagttaattactgtcacgtcactgattagttgacgtggc 30711013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 22890330 - 22890275
Alignment:
Q  5 taatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgatta 60  Q
    |||||| |||| |||| ||| |||| ||||||||||||||||||||||||| ||||    
T  22890330 taatcacttaaaattttgtccctcttcccacttaatcactgtcacatcactaatta 22890275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 2266583 - 2266624
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||| ||||| |||||||| ||||||||||||||||||||    
T  2266583 ttaatcgtttaaaatttcgtccctctccccacttaatcactg 2266624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 8316925 - 8316884
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| ||||||||  |||||||||||||||||||    
T  8316925 ttaatcatttaaaatttcgtccatctccccacttaatcactg 8316884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 12273190 - 12273149
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| |||| |||||||||||||||    
T  12273190 ttaatcatttaaaatttcgtccctcttcccacttaatcactg 12273149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 22915695 - 22915654
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| ||| |||| ||||||||||||||||||||    
T  22915695 ttaatcatttaaaattccgtccctctccccacttaatcactg 22915654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 35449915 - 35449874
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||| ||||||||||    
T  35449915 ttaatcatttaaaatttcgtccctctccccatttaatcactg 35449874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 24085873 - 24085921
Alignment:
Q  12 ttaagatttcgtcactctccccacttaatcactgtcacatcactgatta 60  Q
    |||| |||| ||| |||||||||||||||||||||||| ||||| ||||    
T  24085873 ttaaaattttgtccctctccccacttaatcactgtcacgtcactaatta 24085921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 69056 - 69120
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgt 68  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||| ||||| ||| | ||||||    
T  69056 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgt 69120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 23322 - 23401
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggctctgtttattgg 83  Q
    |||||||||||| |||| ||  ||| |||||||||||||||| ||| ||| | ||| ||||||||||||||||| |||||    
T  23322 ttaatcatttaaaatttggtttctccccccacttaatcactgccacgtcagtaatttgctgacgtggctctgttaattgg 23401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000003; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 21628050 - 21627983
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| |||| ||| |||||||||||||||||||| ||| ||||| ||| | |||||||||    
T  21628050 ttaatcatttaaaattttgtccctctccccacttaatcactgccacgtcactaatttgatgacgtggc 21627983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 30803952 - 30804019
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||  ||||| ||| | |||||||||    
T  30803952 ttaatcatttaaaatttcgtccctctccccacttaatcactgccatctcactaatttgatgacgtggc 30804019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 33517625 - 33517692
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| |||||||| ||||||||||||||||||||  || ||||| ||| | |||||||||    
T  33517625 ttaatcatttaaaatttcgtccctctccccacttaatcactgctacgtcactaatttgatgacgtggc 33517692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 33647054 - 33647121
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| |||||||| ||||||||| |||||||||| ||| ||||| ||| | |||||||||    
T  33647054 ttaatcatttaaaatttcgtctctctccccatttaatcactgccacgtcactaatttgatgacgtggc 33647121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 12080727 - 12080768
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  12080727 ttaatcatttaaaatttcgtccctctccccacttaatcactg 12080768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 28000691 - 28000650
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  28000691 ttaatcatttaaaatttcgtccctctccccacttaatcactg 28000650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 30337540 - 30337581
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  30337540 ttaatcatttaaaatttcgtccctctccccacttaatcactg 30337581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 679956 - 680024
Alignment:
Q  3 attaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    ||||||||||||| ||||||||  |   |||| ||||| |||| |||||||||||||||||||||||||    
T  679956 attaatcatttaaaatttcgtccatgagcccagttaattactgccacatcactgattagctgacgtggc 680024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 30725850 - 30725917
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    |||||||||||| |||||||| ||||||||| |||||||||| ||  ||||| ||| | |||||||||    
T  30725850 ttaatcatttaaaatttcgtccctctccccatttaatcactgccatgtcactaatttgatgacgtggc 30725917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 363136 - 363095
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||| ||||| |||||||| ||||||||||||||||||||    
T  363136 ttaatcgtttaaaatttcgtccctctccccacttaatcactg 363095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 3059348 - 3059389
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| |||||| |||||||||||||    
T  3059348 ttaatcatttaaaatttcgtccctctcctcacttaatcactg 3059389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 14196921 - 14196880
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||| | ||||||||||||||||||||    
T  14196921 ttaatcatttaaaatttcgcccctctccccacttaatcactg 14196880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 17734500 - 17734459
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||| ||| ||||||||||||||||||||    
T  17734500 ttaatcatttaaaattttgtccctctccccacttaatcactg 17734459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 681066 - 680998
Alignment:
Q  3 attaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgtggc 71  Q
    ||||||||||||| ||||||||  |   |||| ||||| |||| ||| |||||||||||||||||||||    
T  681066 attaatcatttaaaatttcgtccatgagcccagttaattactgccacgtcactgattagctgacgtggc 680998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 1215203 - 1215147
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgatta 60  Q
    ||||||| |||| |||||||| || ||||||||||||||||| ||| ||||| ||||    
T  1215203 ttaatcacttaaaatttcgtccctatccccacttaatcactgccacgtcactaatta 1215147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 26463270 - 26463326
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgatta 60  Q
    |||||||||||| |||||||| |||  |||| |||||||||| ||| ||||||||||    
T  26463270 ttaatcatttaaaatttcgtccctcatcccagttaatcactgccacgtcactgatta 26463326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 28498362 - 28498298
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgt 68  Q
    |||||||||||| |||| ||| ||   |||| |||||||||| ||| ||||||||||||||||||    
T  28498362 ttaatcatttaaaatttggtccctgagcccagttaatcactgccacgtcactgattagctgacgt 28498298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 29810773 - 29810709
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcactgattagctgacgt 68  Q
    |||||||||||| |||| ||| ||   |||| |||||||||| ||| ||||||||||||||||||    
T  29810773 ttaatcatttaaaatttggtccctgagcccagttaatcactgccacgtcactgattagctgacgt 29810709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 139762 - 139804
Alignment:
Q  3 attaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    ||||||||||||| |||||||| ||||||||||||||||||||    
T  139762 attaatcatttaaaatttcgtccctctccccacttaatcactg 139804  T

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Target: scaffold0559 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 1324 - 1365
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  1324 ttaatcatttaaaatttcgtccctctccccacttaatcactg 1365  T

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Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 141900 - 141859
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  141900 ttaatcatttaaaatttcgtccctctccccacttaatcactg 141859  T

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Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 1860 - 1901
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  1860 ttaatcatttaaaatttcgtccctctccccacttaatcactg 1901  T

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Target: scaffold0027 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 14127 - 14060
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactgtcacatcact-gattagctgacgtggc 71  Q
    |||||||||||| |||| ||| ||| ||||||||||||| |||||| ||||| ||||||||||||||||    
T  14127 ttaatcatttaaaatttggtccctc-ccccacttaatcattgtcacgtcactagattagctgacgtggc 14060  T

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Target: scaffold0295 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 2234 - 2275
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| |||| ||| ||||||||||||||||||||    
T  2234 ttaatcatttaaaattttgtccctctccccacttaatcactg 2275  T

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Target: scaffold0205 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 21275 - 21234
Alignment:
Q  4 ttaatcatttaagatttcgtcactctccccacttaatcactg 45  Q
    |||||||||||| ||| |||| ||||||||||||||||||||    
T  21275 ttaatcatttaaaattccgtccctctccccacttaatcactg 21234  T

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