View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21347_high_71 (Length: 238)

Name: NF21347_high_71
Description: NF21347
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21347_high_71
NF21347_high_71
[»] chr8 (37 HSPs)
chr8 (20-129)||(39030376-39030485)
chr8 (131-230)||(38598965-38599064)
chr8 (120-230)||(25288076-25288187)
chr8 (130-230)||(1231526-1231626)
chr8 (131-230)||(34213765-34213864)
chr8 (131-207)||(7393168-7393244)
chr8 (131-230)||(1232799-1232896)
chr8 (131-211)||(34665771-34665851)
chr8 (131-211)||(33497635-33497715)
chr8 (131-201)||(4463455-4463525)
chr8 (131-211)||(34214547-34214628)
chr8 (156-211)||(34666559-34666614)
chr8 (135-211)||(4970130-4970206)
chr8 (135-207)||(24377186-24377258)
chr8 (141-211)||(24379015-24379085)
chr8 (135-207)||(29574747-29574819)
chr8 (131-210)||(27437539-27437618)
chr8 (156-211)||(33497042-33497097)
chr8 (135-205)||(29575910-29575980)
chr8 (135-203)||(36574822-36574890)
chr8 (172-207)||(7392250-7392285)
chr8 (149-208)||(9632347-9632406)
chr8 (131-210)||(27436564-27436643)
chr8 (131-197)||(37342976-37343042)
chr8 (131-197)||(43866835-43866901)
chr8 (144-213)||(20096325-20096394)
chr8 (144-197)||(36623560-36623613)
chr8 (131-199)||(36623353-36623421)
chr8 (131-199)||(38600265-38600333)
chr8 (131-199)||(40422475-40422543)
chr8 (131-230)||(7677-7776)
chr8 (143-202)||(36576029-36576088)
chr8 (131-230)||(36623637-36623736)
chr8 (131-230)||(43866712-43866811)
chr8 (131-197)||(547629-547695)
chr8 (144-230)||(27857026-27857112)
chr8 (153-230)||(23424796-23424873)
[»] scaffold0347 (2 HSPs)
scaffold0347 (131-238)||(13610-13717)
scaffold0347 (132-238)||(14585-14691)
[»] chr7 (28 HSPs)
chr7 (131-238)||(38643551-38643658)
chr7 (131-238)||(4227164-4227271)
chr7 (131-230)||(7158232-7158331)
chr7 (119-238)||(12644125-12644244)
chr7 (131-230)||(12929288-12929387)
chr7 (131-230)||(12930773-12930872)
chr7 (131-232)||(45915806-45915907)
chr7 (131-238)||(4226126-4226233)
chr7 (131-238)||(12643101-12643208)
chr7 (131-238)||(38644652-38644759)
chr7 (131-211)||(37284110-37284190)
chr7 (131-238)||(47558031-47558138)
chr7 (131-211)||(37289329-37289409)
chr7 (131-238)||(45914527-45914632)
chr7 (131-211)||(27479988-27480068)
chr7 (135-211)||(22661362-22661438)
chr7 (131-211)||(27480766-27480846)
chr7 (135-207)||(31695637-31695709)
chr7 (135-205)||(31694476-31694546)
chr7 (131-230)||(43937895-43937994)
chr7 (131-230)||(43938178-43938277)
chr7 (159-211)||(37563657-37563709)
chr7 (149-199)||(5280586-5280636)
chr7 (145-207)||(7159235-7159297)
chr7 (144-230)||(12931022-12931108)
chr7 (131-197)||(15827915-15827981)
chr7 (153-199)||(37563377-37563423)
chr7 (143-208)||(40022551-40022615)
[»] chr5 (35 HSPs)
chr5 (131-238)||(22870454-22870561)
chr5 (141-238)||(22869616-22869713)
chr5 (131-207)||(31107932-31108008)
chr5 (131-230)||(14744730-14744829)
chr5 (131-230)||(20856933-20857032)
chr5 (135-211)||(36476770-36476846)
chr5 (131-230)||(20857547-20857646)
chr5 (131-230)||(21978971-21979070)
chr5 (131-211)||(20072888-20072968)
chr5 (135-211)||(36477395-36477471)
chr5 (131-211)||(39181058-39181138)
chr5 (135-211)||(16532898-16532974)
chr5 (131-211)||(20072122-20072202)
chr5 (135-211)||(21978036-21978112)
chr5 (131-208)||(8654108-8654185)
chr5 (126-211)||(39181815-39181900)
chr5 (135-211)||(8673777-8673853)
chr5 (131-211)||(16533644-16533724)
chr5 (168-230)||(39402148-39402210)
chr5 (144-209)||(21972104-21972168)
chr5 (133-230)||(31108338-31108434)
chr5 (130-230)||(25253086-25253186)
chr5 (130-230)||(25316876-25316976)
chr5 (131-230)||(14745449-14745548)
chr5 (131-230)||(37944995-37945094)
chr5 (144-230)||(21260879-21260965)
chr5 (159-199)||(33735342-33735382)
chr5 (131-230)||(32052508-32052607)
chr5 (131-230)||(33735597-33735696)
chr5 (131-197)||(7015509-7015575)
chr5 (144-194)||(31118969-31119019)
chr5 (130-210)||(18934713-18934793)
chr5 (117-160)||(19892294-19892338)
chr5 (131-199)||(25253401-25253469)
chr5 (131-199)||(25317192-25317260)
[»] chr2 (27 HSPs)
chr2 (122-238)||(25624425-25624541)
chr2 (131-230)||(24387352-24387451)
chr2 (131-238)||(25623289-25623396)
chr2 (131-231)||(24388255-24388355)
chr2 (119-211)||(20101758-20101851)
chr2 (131-211)||(20982525-20982605)
chr2 (131-211)||(29957818-29957898)
chr2 (120-211)||(20983280-20983371)
chr2 (131-213)||(20103161-20103243)
chr2 (131-230)||(29958547-29958646)
chr2 (135-203)||(43236509-43236577)
chr2 (141-230)||(19620793-19620882)
chr2 (142-210)||(23206428-23206496)
chr2 (142-210)||(23678032-23678100)
chr2 (135-203)||(43237747-43237815)
chr2 (131-230)||(10446833-10446932)
chr2 (144-230)||(16367247-16367333)
chr2 (157-199)||(21103108-21103150)
chr2 (131-208)||(9694048-9694125)
chr2 (131-199)||(1149938-1150006)
chr2 (131-230)||(20911131-20911230)
chr2 (153-203)||(7981070-7981120)
chr2 (144-230)||(28599441-28599527)
chr2 (144-197)||(17580452-17580505)
chr2 (122-210)||(33882892-33882981)
chr2 (135-203)||(7983837-7983905)
chr2 (131-199)||(32519156-32519224)
[»] chr1 (36 HSPs)
chr1 (133-238)||(25064936-25065041)
chr1 (133-238)||(25065950-25066055)
chr1 (131-232)||(13295136-13295237)
chr1 (131-230)||(49093042-49093141)
chr1 (135-211)||(32619389-32619465)
chr1 (135-211)||(46282812-46282888)
chr1 (131-230)||(2828194-2828293)
chr1 (135-210)||(32238704-32238779)
chr1 (144-211)||(32622375-32622442)
chr1 (135-210)||(50062968-50063043)
chr1 (126-211)||(51935218-51935303)
chr1 (131-211)||(46282072-46282152)
chr1 (131-202)||(13295608-13295679)
chr1 (135-237)||(6345630-6345732)
chr1 (135-211)||(6344260-6344336)
chr1 (131-210)||(24701573-24701652)
chr1 (168-211)||(49093832-49093875)
chr1 (131-197)||(29042879-29042945)
chr1 (131-230)||(2829539-2829645)
chr1 (126-230)||(5183790-5183894)
chr1 (159-230)||(10019657-10019728)
chr1 (117-199)||(29043070-29043152)
chr1 (126-198)||(5926837-5926909)
chr1 (159-207)||(28534820-28534868)
chr1 (130-230)||(29980922-29981022)
chr1 (173-209)||(50062246-50062282)
chr1 (131-230)||(1040299-1040398)
chr1 (131-230)||(1047205-1047304)
chr1 (131-230)||(2953748-2953847)
chr1 (131-230)||(19755689-19755788)
chr1 (131-230)||(46849942-46850041)
chr1 (135-210)||(52563656-52563731)
chr1 (144-230)||(5926533-5926619)
chr1 (143-201)||(36381451-36381509)
chr1 (131-197)||(46849852-46849918)
chr1 (131-199)||(26953102-26953170)
[»] chr6 (21 HSPs)
chr6 (131-230)||(33401126-33401225)
chr6 (131-230)||(17784385-17784484)
chr6 (131-230)||(4116800-4116899)
chr6 (131-230)||(4117547-4117646)
chr6 (136-211)||(8427384-8427459)
chr6 (131-230)||(14656481-14656580)
chr6 (126-211)||(33399962-33400047)
chr6 (144-207)||(1661453-1661516)
chr6 (131-211)||(14657228-14657308)
chr6 (131-211)||(8427201-8427281)
chr6 (130-230)||(23291744-23291844)
chr6 (131-230)||(13480209-13480308)
chr6 (131-230)||(13480492-13480591)
chr6 (166-230)||(5064371-5064435)
chr6 (144-230)||(32337578-32337664)
chr6 (130-199)||(3299874-3299943)
chr6 (153-230)||(5064619-5064696)
chr6 (126-199)||(23292059-23292132)
chr6 (131-199)||(15819805-15819873)
chr6 (131-199)||(16704624-16704692)
chr6 (166-230)||(20994975-20995039)
[»] chr3 (30 HSPs)
chr3 (131-238)||(32717097-32717204)
chr3 (131-237)||(29192986-29193092)
chr3 (135-238)||(29192040-29192143)
chr3 (126-211)||(45279303-45279388)
chr3 (131-211)||(48189118-48189198)
chr3 (144-211)||(44476063-44476130)
chr3 (126-211)||(11026651-11026736)
chr3 (131-211)||(2944685-2944765)
chr3 (131-211)||(22736709-22736789)
chr3 (135-211)||(37249204-37249280)
chr3 (144-211)||(1756564-1756631)
chr3 (144-211)||(48188392-48188459)
chr3 (131-211)||(1757323-1757403)
chr3 (131-230)||(2943914-2944013)
chr3 (135-211)||(37249817-37249892)
chr3 (147-211)||(43105250-43105314)
chr3 (135-211)||(43105853-43105929)
chr3 (135-211)||(44481972-44482048)
chr3 (135-211)||(45278549-45278625)
chr3 (156-210)||(11025963-11026017)
chr3 (131-197)||(11312929-11312995)
chr3 (131-197)||(21300327-21300393)
chr3 (131-197)||(53037151-53037217)
chr3 (165-238)||(32716284-32716357)
chr3 (144-232)||(55036683-55036771)
chr3 (131-230)||(1741388-1741487)
chr3 (153-230)||(10998157-10998234)
chr3 (174-211)||(22735403-22735440)
chr3 (159-208)||(46670561-46670610)
chr3 (131-199)||(53037028-53037096)
[»] scaffold1493 (1 HSPs)
scaffold1493 (120-230)||(582-693)
[»] scaffold0009 (2 HSPs)
scaffold0009 (119-230)||(260990-261101)
scaffold0009 (131-232)||(262439-262540)
[»] chr4 (31 HSPs)
chr4 (131-232)||(23454955-23455056)
chr4 (131-230)||(23455689-23455788)
chr4 (131-230)||(53477080-53477179)
chr4 (126-211)||(54591597-54591682)
chr4 (131-211)||(38813555-38813635)
chr4 (131-211)||(38814346-38814426)
chr4 (135-211)||(38982615-38982691)
chr4 (133-230)||(54590146-54590243)
chr4 (131-211)||(56556583-56556663)
chr4 (119-211)||(56557344-56557436)
chr4 (131-205)||(13336863-13336937)
chr4 (131-211)||(52815664-52815744)
chr4 (131-211)||(52816442-52816522)
chr4 (131-211)||(55013108-55013187)
chr4 (135-205)||(22882352-22882422)
chr4 (135-205)||(22934016-22934086)
chr4 (135-200)||(9254411-9254476)
chr4 (120-230)||(12691396-12691506)
chr4 (131-197)||(22249927-22249993)
chr4 (135-205)||(22881172-22881242)
chr4 (135-205)||(22932836-22932906)
chr4 (131-199)||(8287248-8287316)
chr4 (130-230)||(32846362-32846462)
chr4 (131-199)||(53475832-53475900)
chr4 (131-230)||(22250017-22250116)
chr4 (131-230)||(53559671-53559770)
chr4 (131-230)||(54961432-54961531)
chr4 (144-205)||(35730970-35731031)
chr4 (131-199)||(19740861-19740929)
chr4 (131-199)||(33294458-33294526)
chr4 (131-199)||(37677849-37677917)
[»] scaffold0182 (2 HSPs)
scaffold0182 (131-207)||(14400-14476)
scaffold0182 (131-211)||(13135-13215)
[»] scaffold0018 (1 HSPs)
scaffold0018 (131-211)||(73110-73190)
[»] scaffold0206 (1 HSPs)
scaffold0206 (131-230)||(10326-10425)
[»] scaffold0201 (1 HSPs)
scaffold0201 (166-230)||(14177-14241)


Alignment Details
Target: chr8 (Bit Score: 110; Significance: 1e-55; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 39030376 - 39030485
Alignment:
Q  20 tcacacaattgttgatatgtggttgattgacaacatcctaaataatcaaactaatgtgacccggtcaaaaatatgagaaaacaaattgtgatgtattttt 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39030376 tcacacaattgttgatatgtggttgattgacaacatcctaaataatcaaactaatgtgacccggtcaaaaatatgagaaaacaaattgtgatgtattttt 39030475  T
Q  120 attttatttt 129  Q
    ||||||||||    
T  39030476 attttatttt 39030485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 131 - 230
Target Start/End: Original strand, 38598965 - 38599064
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |  ||| |||||||||||    
T  38598965 gcttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctctcattttgcccctgcaaatattaatcattt 38599064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 120 - 230
Target Start/End: Complemental strand, 25288187 - 25288076
Alignment:
Q  120 attttattttag-cttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaa 218  Q
    |||||||||||| |||||||| ||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |  |||    
T  25288187 attttattttaggcttaaatatgcatttcatcactgcaattataggtcatttgatttttcatccctgaacttactaatcctctcattttgcccctgcaaa 25288088  T
Q  219 aattaatcattt 230  Q
     |||||||||||    
T  25288087 tattaatcattt 25288076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 130 - 230
Target Start/End: Original strand, 1231526 - 1231626
Alignment:
Q  130 agcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcatt 229  Q
    |||||||||| ||||||||||| | |||||||||||| ||||||||||||||| ||| |||||||||||||||||||| ||| | |||||||||||||||    
T  1231526 agcttaaatatgcatttcatccctacaattataggccctttgatttttcatccatgagcttactaatcctcccattttacccctgtaaaaattaatcatt 1231625  T
Q  230 t 230  Q
    |    
T  1231626 t 1231626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 131 - 230
Target Start/End: Original strand, 34213765 - 34213864
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| || |||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||| | ||||| ||||||||||    
T  34213765 gcttaaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttactaatcctcctattttgcccctgtaaaagttaatcattt 34213864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 7393244 - 7393168
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccatttt 207  Q
    |||||||||  |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  7393244 gcttaaatagacatttcatccctgcaattataggtcatttgatttttcatccctgaacttactaatcctcccatttt 7393168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 131 - 230
Target Start/End: Complemental strand, 1232896 - 1232799
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||| |||    ||||||||||||||||| | ||||||||||||||||    
T  1232896 gcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagctt--gtatcctcccattttgcccctgtaaaaattaatcattt 1232799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 34665771 - 34665851
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||||||| || |||||||| || ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  34665771 gcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgccc 34665851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 211
Target Start/End: Complemental strand, 33497715 - 33497635
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||||||| || |||||||| || ||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||    
T  33497715 gcttaaatatgcttttcatccctgtaattatagggcatttgatttttcatccatgagcttactaatcctcccattttgccc 33497635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 131 - 201
Target Start/End: Complemental strand, 4463525 - 4463455
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcc 201  Q
    ||||||||| ||||||||||| ||||| ||||||||||||||  |||||||||||||||||||||||||||    
T  4463525 gcttaaatatgcatttcatccctgcaagtataggccatttgaaatttcatccctgaacttactaatcctcc 4463455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 131 - 211
Target Start/End: Complemental strand, 34214628 - 34214547
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttca-tccctgaacttactaatcctcccattttgccc 211  Q
    ||||||||| || |||||||| || ||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||    
T  34214628 gcttaaatatgcttttcatccctgtaattataggccgtttgatttttcaatccctgaacttactaatccttccattttgccc 34214547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 34666614 - 34666559
Alignment:
Q  156 aattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  34666614 aattataggccgtttgatttttcatccctgaacttactaatccttccattttgccc 34666559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 211
Target Start/End: Original strand, 4970130 - 4970206
Alignment:
Q  135 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||| ||||||||||| ||||||||  || |||||||  ||||||||||||||||||||||||| |||||||||||    
T  4970130 aaatatgcatttcatccctgcaattaggggtcatttgaaatttcatccctgaacttactaatccttccattttgccc 4970206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 207
Target Start/End: Original strand, 24377186 - 24377258
Alignment:
Q  135 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccatttt 207  Q
    ||||| ||||||||| ||||||||||  || |||||||  |||||||||||||||||||||||||||||||||    
T  24377186 aaatatgcatttcattcttgcaattaggggtcatttgaagtttcatccctgaacttactaatcctcccatttt 24377258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 24379085 - 24379015
Alignment:
Q  141 gcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||||||||| ||||||||  || |||||||| |||||||| |||||||||||||||||| |||||||||    
T  24379085 gcatttcatccctgcaattaggggtcatttgatatttcatccttgaacttactaatcctcctattttgccc 24379015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 207
Target Start/End: Original strand, 29574747 - 29574819
Alignment:
Q  135 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccatttt 207  Q
    ||||| ||||||||||| ||||| |||||| |||||||  |||||||||| |||||||||||||| |||||||    
T  29574747 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctaaacttactaatccttccatttt 29574819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 210
Target Start/End: Complemental strand, 27437618 - 27437539
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcc 210  Q
    ||||||||| ||||||||||| ||||| |||||||| ||||| ||||| |||||||| ||||||||| |  |||||||||    
T  27437618 gcttaaatatgcatttcatccctgcaaatataggccgtttgaattttcgtccctgaagttactaatcttttcattttgcc 27437539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 33497042 - 33497097
Alignment:
Q  156 aattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||||||| ||||||||||||||| | |||||||||||||||| |||||||||||    
T  33497042 aattataggtcatttgatttttcattcttgaacttactaatccttccattttgccc 33497097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 205
Target Start/End: Complemental strand, 29575980 - 29575910
Alignment:
Q  135 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccatt 205  Q
    ||||| ||||||||||| ||||| ||||| ||||||||  |||||||||| || |||||||||||||||||    
T  29575980 aaatatgcatttcatccctgcaaatatagtccatttgaaatttcatccctaaatttactaatcctcccatt 29575910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 203
Target Start/End: Original strand, 36574822 - 36574890
Alignment:
Q  135 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctccca 203  Q
    ||||| ||||||||||  ||||  |||||| |||||||  |||||||||||||||||||||||||||||    
T  36574822 aaatatgcatttcatctctgcatatatagggcatttgaaatttcatccctgaacttactaatcctccca 36574890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 207
Target Start/End: Original strand, 7392250 - 7392285
Alignment:
Q  172 atttttcatccctgaacttactaatcctcccatttt 207  Q
    ||||||||||||||||||||||||||||||||||||    
T  7392250 atttttcatccctgaacttactaatcctcccatttt 7392285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 9632347 - 9632406
Alignment:
Q  149 tccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttg 208  Q
    ||||||||| |||||| ||||||| ||||| |||||||| ||||||||||| ||||||||    
T  9632347 tccttgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccattttg 9632406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 210
Target Start/End: Original strand, 27436564 - 27436643
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcc 210  Q
    ||||||||| ||||||||||| ||||| |||||| | ||||| ||||| |||||||| ||||||||| |  |||||||||    
T  27436564 gcttaaatatgcatttcatccctgcaaatataggtcgtttgaattttcgtccctgaagttactaatcttttcattttgcc 27436643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 37342976 - 37343042
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatc 197  Q
    ||||||||| |  |||||||| ||||| |||||| ||||||| |||||||||||||| |||||||||    
T  37342976 gcttaaataggtctttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatc 37343042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 43866901 - 43866835
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatc 197  Q
    ||||||||| |  |||||||| ||||| |||||| ||||||| |||||||||||||| |||||||||    
T  43866901 gcttaaataagtctttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatc 43866835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 213
Target Start/End: Complemental strand, 20096394 - 20096325
Alignment:
Q  144 tttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccat 213  Q
    |||| ||| ||||| |||||||||||||| ||||| |||||||| ||||||||||| ||| | |||||||    
T  20096394 tttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgcccat 20096325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 36623560 - 36623613
Alignment:
Q  144 tttcatccttgcaattataggccatttgatttttcatccctgaacttactaatc 197  Q
    |||||||| ||||| |||||| ||||||| |||||||||||||| |||||||||    
T  36623560 tttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatc 36623613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 36623353 - 36623421
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcct 199  Q
    ||||||||| |  |||| ||| ||||| |||||||||||||| ||||| |||||||| |||||||||||    
T  36623353 gcttaaatatgtttttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatcct 36623421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 38600333 - 38600265
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcct 199  Q
    ||||||||| ||||||| ||| ||||| |||||| |||||||  |||| |||||||| |||||||||||    
T  38600333 gcttaaataggcatttcgtccctgcaaatataggtcatttgaaatttcgtccctgaagttactaatcct 38600265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 40422543 - 40422475
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcct 199  Q
    ||||||||| |  |||||||| ||||| |||||| ||||||| ||||| |||||||| |||||||||||    
T  40422543 gcttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatcct 40422475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 230
Target Start/End: Complemental strand, 7776 - 7677
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| |  |||| ||| ||||| |||||||||||||| ||||| ||| |||| ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  7776 gcttaaataggtctttcgtccctgcaaatataggccatttgaattttcgtccatgaagttactaatccttccaatatgcccctgcaaatattaatcattt 7677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 36576088 - 36576029
Alignment:
Q  143 atttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctccc 202  Q
    ||||||||| || || |||| |||||||||  |||||||||||||||||| |||||||||    
T  36576088 atttcatccctgtaaatataagccatttgaaatttcatccctgaacttaccaatcctccc 36576029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 230
Target Start/End: Complemental strand, 36623736 - 36623637
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| |  |||| ||| ||||| |||||||||||||| ||||| |||||||| |||||||| || ||| | ||||| |  ||| |||||||||||    
T  36623736 gcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaaattactaattcttccaatatgcccctgcaaatattaatcattt 36623637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 230
Target Start/End: Original strand, 43866712 - 43866811
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| |  |||| ||| ||||| |||||||||||||| ||||| |||||||| |||||||| || ||| | ||||| |  ||| |||||||||||    
T  43866712 gcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaaattactaattcttccaatatgcccctgcaaatattaatcattt 43866811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 547629 - 547695
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatc 197  Q
    ||||||||| |  |||||||| |||||||||||| ||||||| ||||| ||| |||| |||||||||    
T  547629 gcttaaataggtctttcatccctgcaattataggtcatttgaattttcgtccttgaagttactaatc 547695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 230
Target Start/End: Complemental strand, 27857112 - 27857026
Alignment:
Q  144 tttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    |||| ||| ||||| |||||||||||||| ||||| |||||||| ||||||||| | ||| | ||||| |  ||| |||||||||||    
T  27857112 tttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatcattccaatctgcccttgcaaatattaatcattt 27857026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 230
Target Start/End: Complemental strand, 23424873 - 23424796
Alignment:
Q  153 tgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||| |||||||||||||| ||||| |||||||| ||||||||| | ||| | ||||| |  ||| |||||||||||    
T  23424873 tgcaaatataggccatttgaattttcgtccctgaagttactaatcattccaatctgcccctgcaaatattaatcattt 23424796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 131 - 238
Target Start/End: Original strand, 13610 - 13717
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||    
T  13610 gcttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgagcttactaatccttccattttgcccctataaaaattaatcattt 13709  T
Q  231 aagatttc 238  Q
    ||||||||    
T  13710 aagatttc 13717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 132 - 238
Target Start/End: Complemental strand, 14691 - 14585
Alignment:
Q  132 cttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattta 231  Q
    |||||||| ||||||||| | | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  14691 cttaaatatgcatttcattccttcaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctataaaaattaatcattta 14592  T
Q  232 agatttc 238  Q
    |||||||    
T  14591 agatttc 14585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 1e-37; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 131 - 238
Target Start/End: Original strand, 38643551 - 38643658
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| | | ||||||||||||||||    
T  38643551 gcttaaatatgcatttcatccctgcaattataggccatttgatttttcatccttgaccttactaatcctcccattttgctcctgtaaaaattaatcattt 38643650  T
Q  231 aagatttc 238  Q
    ||||||||    
T  38643651 aagatttc 38643658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 131 - 238
Target Start/End: Complemental strand, 4227271 - 4227164
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| ||||||||||| || ||||||||||||||||||||||||||| ||| ||||||||||||||||||||| || | |||||||||| |||||    
T  4227271 gcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccttgagcttactaatcctcccattttgtccctgtaaaaattaaccattt 4227172  T
Q  231 aagatttc 238  Q
    || |||||    
T  4227171 aaaatttc 4227164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 131 - 230
Target Start/End: Original strand, 7158232 - 7158331
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| ||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| | |||| |||||||||||    
T  7158232 gcttaaatatgcatttcatccctacaattataggccatttgatttttcatccatgaacttactaatccttccattttgcccctgtaaatattaatcattt 7158331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 119 - 238
Target Start/End: Complemental strand, 12644244 - 12644125
Alignment:
Q  119 tattttattttagcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaa 218  Q
    |||||| ||| |||||||||| ||||||||||| |  ||||| ||||||||||||||||||||||||| |||||||||||||||||||| | | | ||||    
T  12644244 tattttttttaagcttaaatatgcatttcatccctataattacaggccatttgatttttcatccctgagcttactaatcctcccattttactcctgtaaa 12644145  T
Q  219 aattaatcatttaagatttc 238  Q
    |||||||||||||| |||||    
T  12644144 aattaatcatttaaaatttc 12644125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 131 - 230
Target Start/End: Original strand, 12929288 - 12929387
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| ||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |  ||| |||||||||||    
T  12929288 gcttaaatatgcatttcatccctgcaaatataggctatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcattt 12929387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 131 - 230
Target Start/End: Original strand, 12930773 - 12930872
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |  ||| |||||||||||    
T  12930773 gcttaaatatgcatttcatccctgcaattataggtcatttgatttttcatccctgaacttactaatccttccattttgcccctgcaaatattaatcattt 12930872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 131 - 232
Target Start/End: Complemental strand, 45915907 - 45915806
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| ||||||||||| || ||||||||||||||||||||||||||||| | |||||||||||||| ||||| ||| | ||||||||||||||||    
T  45915907 gcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctaagcttactaatcctcctattttacccctgtaaaaattaatcattt 45915808  T
Q  231 aa 232  Q
    ||    
T  45915807 aa 45915806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 131 - 238
Target Start/End: Original strand, 4226126 - 4226233
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| ||||||||||| || ||||||||||||||||||| |||| || ||| |||||||||||| ||||||||||| | ||||||||||||||||    
T  4226126 gcttaaatatgcatttcatccctgtaattataggccatttgattcttcaaccatgagcttactaatccttccattttgcccctgtaaaaattaatcattt 4226225  T
Q  231 aagatttc 238  Q
    || |||||    
T  4226226 aaaatttc 4226233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 131 - 238
Target Start/End: Original strand, 12643101 - 12643208
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| ||||||||||| || |||||||||||||||||||||||||| |||| |||||||||||||||||||| ||| |  ||||||||| |||||    
T  12643101 gcttaaatatgcatttcatccctgtaattataggccatttgatttttcatctctgagcttactaatcctcccattttacccctgcaaaaattaaccattt 12643200  T
Q  231 aagatttc 238  Q
    || |||||    
T  12643201 aaaatttc 12643208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 131 - 238
Target Start/End: Complemental strand, 38644759 - 38644652
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| ||||||||| |||||||||||||| |||||||||||| |||||| | |||| ||||||| |||||||| || | ||||||||||||||||    
T  38644759 gcttaaatatgcatttcattcttgcaattataggtcatttgattttttatccctaagcttattaatccttccattttgaccttgtaaaaattaatcattt 38644660  T
Q  231 aagatttc 238  Q
    ||||||||    
T  38644659 aagatttc 38644652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 37284110 - 37284190
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||||||| || |||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37284110 gcttaaatatgcttttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgccc 37284190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 131 - 238
Target Start/End: Original strand, 47558031 - 47558138
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| ||||||||||  |  |||||||||| ||||||||||||||||||||  ||||||||||||||||||||||| | |||||||||| |||||    
T  47558031 gcttaaatatgcatttcatctctttaattataggctatttgatttttcatccctgagtttactaatcctcccattttgcccctgtaaaaattaaccattt 47558130  T
Q  231 aagatttc 238  Q
    || |||||    
T  47558131 aaaatttc 47558138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 131 - 211
Target Start/End: Complemental strand, 37289409 - 37289329
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||||||| || |||||||| || |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  37289409 gcttaaatatgcttttcatccctgtaattataggccatttggtttttcatccctgagcttactaatcctcccattttgccc 37289329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 131 - 238
Target Start/End: Original strand, 45914527 - 45914632
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| ||||||||||  || ||||||||||||||||||||||||||||| | ||||||||| ||| |||||||||| | ||||||||||||||||    
T  45914527 gcttaaatatgcatttcatctctgtaattataggccatttgatttttcatccctaagcttactaat-ctctcattttgccc-tgtaaaaattaatcattt 45914624  T
Q  231 aagatttc 238  Q
    || |||||    
T  45914625 aaaatttc 45914632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 27479988 - 27480068
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||||||| || |||||||| ||||||||||||||  |||||||||||||||||| |||||||||||||| |||||||||    
T  27479988 gcttaaatatgcttttcatccctgcaattataggccgcttgatttttcatccctgagcttactaatcctcctattttgccc 27480068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 211
Target Start/End: Original strand, 22661362 - 22661438
Alignment:
Q  135 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||| || |||||||| || ||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||    
T  22661362 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccttgaacttactaatccttccattttgccc 22661438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 211
Target Start/End: Complemental strand, 27480846 - 27480766
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||||||| |  |||||||| || ||||||||||| ||||||||||||||| |||  ||||||||||| |||||||||||    
T  27480846 gcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccttgattttactaatccttccattttgccc 27480766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 207
Target Start/End: Complemental strand, 31695709 - 31695637
Alignment:
Q  135 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccatttt 207  Q
    ||||| ||||||||||| ||||| |||||| |||||||  |||||||||| |||||||||||||| |||||||    
T  31695709 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctaaacttactaatccttccatttt 31695637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 205
Target Start/End: Original strand, 31694476 - 31694546
Alignment:
Q  135 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccatt 205  Q
    ||||| ||||||||||| ||||| ||||| ||||||||  |||||||||| || |||||||||||||||||    
T  31694476 aaatatgcatttcatccctgcaaatatagtccatttgaaatttcatccctaaatttactaatcctcccatt 31694546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 230
Target Start/End: Original strand, 43937895 - 43937994
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| |  |||| |||||| || |||||| ||||||| |||||||||||||| ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  43937895 gcttaaatatgtctttcgtccttgtaaatataggtcatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 43937994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 230
Target Start/End: Complemental strand, 43938277 - 43938178
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| |  |||| ||||||||| |||| ||||||||| ||||| |||||||| ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  43938277 gcttaaatatgtctttcgtccttgcaaatataagccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 43938178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 37563709 - 37563657
Alignment:
Q  159 tataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    |||||||||||||| ||||| |||||||| ||||||||||| ||| |||||||    
T  37563709 tataggccatttgaattttcgtccctgaagttactaatccttccaatttgccc 37563657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 199
Target Start/End: Complemental strand, 5280636 - 5280586
Alignment:
Q  149 tccttgcaattataggccatttgatttttcatccctgaacttactaatcct 199  Q
    ||||||||| |||||| ||||||| ||||| |||||||| |||||||||||    
T  5280636 tccttgcaaatataggtcatttgaattttcgtccctgaagttactaatcct 5280586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 207
Target Start/End: Complemental strand, 7159297 - 7159235
Alignment:
Q  145 ttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccatttt 207  Q
    ||||||| ||||| |||||  ||||||| ||||| | |||||| |||||||||||||||||||    
T  7159297 ttcatccctgcaaatatagatcatttgaattttcgttcctgaagttactaatcctcccatttt 7159235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 230
Target Start/End: Complemental strand, 12931108 - 12931022
Alignment:
Q  144 tttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    |||| ||| ||||| ||| || ||||||| ||||| |||||||| ||||||||||| ||| | |||||||  ||| |||||||||||    
T  12931108 tttcgtccctgcaaatattggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccatgcaaatattaatcattt 12931022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 15827915 - 15827981
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatc 197  Q
    ||||||||| |  |||| ||| ||||| |||||||||||||| ||||| |||||||| |||||||||    
T  15827915 gcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatc 15827981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 199
Target Start/End: Original strand, 37563377 - 37563423
Alignment:
Q  153 tgcaattataggccatttgatttttcatccctgaacttactaatcct 199  Q
    ||||| |||||||||||||| ||||| |||||||| |||||||||||    
T  37563377 tgcaaatataggccatttgaattttcgtccctgaatttactaatcct 37563423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 40022615 - 40022551
Alignment:
Q  143 atttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttg 208  Q
    ||||||||| ||||| ||||| | ||||||  |||||||||||| |||||||||||| ||||||||    
T  40022615 atttcatccctgcaaatatagtc-atttgaaatttcatccctgatcttactaatccttccattttg 40022551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 1e-37; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 131 - 238
Target Start/End: Complemental strand, 22870561 - 22870454
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||    
T  22870561 gcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 22870462  T
Q  231 aagatttc 238  Q
    || |||||    
T  22870461 aaaatttc 22870454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 22869616 - 22869713
Alignment:
Q  141 gcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcatttaagatttc 238  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||| ||||||| |||||    
T  22869616 gcatttcatccttgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaaccatttaaaatttc 22869713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 31107932 - 31108008
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccatttt 207  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31107932 gcttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccatttt 31108008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 131 - 230
Target Start/End: Complemental strand, 14744829 - 14744730
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| ||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |  ||| |||||||||||    
T  14744829 gcttaaatatgcatttcatccctgcaattatatgtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcattt 14744730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 131 - 230
Target Start/End: Original strand, 20856933 - 20857032
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| || |||||||| || ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| | ||||| ||||||||||    
T  20856933 gcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaagttaatcattt 20857032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 135 - 211
Target Start/End: Original strand, 36476770 - 36476846
Alignment:
Q  135 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||| || |||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  36476770 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgccc 36476846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 131 - 230
Target Start/End: Complemental strand, 20857646 - 20857547
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| || |||||||| || ||||||||||| ||||||||||||| ||| | |||||||||||||||||||||||| | ||||| ||||||||||    
T  20857646 gcttaaatatgcttttcatccatgtaattataggccgtttgatttttcattcctaagcttactaatcctcccattttgcccctgtaaaagttaatcattt 20857547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 131 - 230
Target Start/End: Complemental strand, 21979070 - 21978971
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| ||||||||||| |||||||||| |||||||||||||||||||  ||||||||||||||||| |||||  || | ||||||||||| ||||    
T  21979070 gcttaaatatgcatttcatccctgcaattataagccatttgatttttcatcctcgaacttactaatcctcctattttatccctgtaaaaattaataattt 21978971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 211
Target Start/End: Complemental strand, 20072968 - 20072888
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||||||| || |||||||| || ||||||||| | |||||||||||||||||||||||||||||||| |||||||||||    
T  20072968 gcttaaatatgcttttcatccctgtaattataggtcgtttgatttttcatccctgaacttactaatccttccattttgccc 20072888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 211
Target Start/End: Complemental strand, 36477471 - 36477395
Alignment:
Q  135 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||| || |||||||| |||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||    
T  36477471 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccatgagcttactaatcctcccattttgccc 36477395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 39181058 - 39181138
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||||||| || |||||||| || ||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||    
T  39181058 gcttaaatatgcttttcatccctgtaattataagccgtttgatttttcatccctgaacttactaatccttccattttgccc 39181138  T

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Target: chr5; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 211
Target Start/End: Original strand, 16532898 - 16532974
Alignment:
Q  135 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||| || |||||||| || ||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||    
T  16532898 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttattaatccttccattttgccc 16532974  T

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Target: chr5; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 20072122 - 20072202
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||||||| || |||||||  || ||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||    
T  20072122 gcttaaatatgcttttcatctctgtaattataggccgtttgatttttcatccctgaacttactaatcctttcattttgccc 20072202  T

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Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 211
Target Start/End: Complemental strand, 21978112 - 21978036
Alignment:
Q  135 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||| || |||||||| || |||||| |||||||||||||||||||||||| |||||||||||||||| |||||||    
T  21978112 aaatatgcttttcatccctgtaattatgggccatttgatttttcatccctgagcttactaatcctcccactttgccc 21978036  T

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Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 208
Target Start/End: Original strand, 8654108 - 8654185
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttg 208  Q
    ||||||||| |  |||||||| || ||||||||| ||||||||||||||||| ||| |||||||||||||||||||||    
T  8654108 gcttaaatatgtttttcatccctgtaattataggtcatttgatttttcatccatgagcttactaatcctcccattttg 8654185  T

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Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 39181900 - 39181815
Alignment:
Q  126 ttttagcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    |||| ||||||||| |  ||| |||| || ||||||||| | |||||||||||||||||||||||||||||||| |||||||||||    
T  39181900 ttttggcttaaatatgtttttaatccctgtaattataggtcgtttgatttttcatccctgaacttactaatccttccattttgccc 39181815  T

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Target: chr5; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 211
Target Start/End: Complemental strand, 8673853 - 8673777
Alignment:
Q  135 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||| ||||||||||| ||||| ||||||||||||||  |||||||| ||||||| ||||| ||||||||||||||    
T  8673853 aaatatgcatttcatccctgcaaatataggccatttgaaatttcatccttgaacttgctaattctcccattttgccc 8673777  T

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Target: chr5; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 131 - 211
Target Start/End: Complemental strand, 16533724 - 16533644
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||||||| || |||||||| |  ||||||||||| |||||||||||||| ||||||||| ||||||| |||||||||||    
T  16533724 gcttaaatatgcttttcatccctataattataggccgtttgatttttcatctctgaacttattaatccttccattttgccc 16533644  T

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Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 168 - 230
Target Start/End: Complemental strand, 39402210 - 39402148
Alignment:
Q  168 tttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |  ||| |||||||||||    
T  39402210 tttgatttttcatccctggacttactaatcctcccattttgcccctgcaaatattaatcattt 39402148  T

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Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 21972104 - 21972168
Alignment:
Q  144 tttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgc 209  Q
    |||||||| || |||||| |||||||||||||||||| ||| | ||||||||||||||||||||||    
T  21972104 tttcatccctgtaattatgggccatttgatttttcat-cctcagcttactaatcctcccattttgc 21972168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 230
Target Start/End: Complemental strand, 31108434 - 31108338
Alignment:
Q  133 ttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||| | ||||||||| ||||| ||||| | |||||||||||||||| |||||||||||||| | |||||||  || | |||| |||||||||||    
T  31108434 ttaaatatgtatttcatccctgcaaatatagac-atttgatttttcatccatgaacttactaatctttccattttatccctgtaaatattaatcattt 31108338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 130 - 230
Target Start/End: Original strand, 25253086 - 25253186
Alignment:
Q  130 agcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcatt 229  Q
    |||||||||| |  |||||||| ||||| |||||  ||||||| ||||| |||||||| ||||||||||| ||| ||||||| |  ||| ||||||||||    
T  25253086 agcttaaatatgtctttcatccctgcaaatatagttcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcatt 25253185  T
Q  230 t 230  Q
    |    
T  25253186 t 25253186  T

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Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 130 - 230
Target Start/End: Original strand, 25316876 - 25316976
Alignment:
Q  130 agcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcatt 229  Q
    |||||||||| |  |||||||| ||||| |||||  ||||||| ||||| |||||||| ||||||||||| ||| ||||||| |  ||| ||||||||||    
T  25316876 agcttaaatatgtctttcatccctgcaaatatagttcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcatt 25316975  T
Q  230 t 230  Q
    |    
T  25316976 t 25316976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 230
Target Start/End: Original strand, 14745449 - 14745548
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| |  |||| ||| ||||| |||||| ||||||| |||||||||||||| ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  14745449 gcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 14745548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 230
Target Start/End: Original strand, 37944995 - 37945094
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| |  |||| |||||| || |||||| ||||||| ||||| |||||||| ||||||||||| ||| ||||||| |  ||| |||||||||||    
T  37944995 gcttaaataggtctttcgtccttgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcattt 37945094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 230
Target Start/End: Original strand, 21260879 - 21260965
Alignment:
Q  144 tttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    |||| ||| ||||| |||||| ||||||| ||||| |||||||| ||||||||||| ||||||||||  |  ||| |||||||||||    
T  21260879 tttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccattttgccattgcaaatattaatcattt 21260965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 33735342 - 33735382
Alignment:
Q  159 tataggccatttgatttttcatccctgaacttactaatcct 199  Q
    |||||||||||||||||||| |||||||| |||||||||||    
T  33735342 tataggccatttgatttttcgtccctgaaattactaatcct 33735382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 230
Target Start/End: Complemental strand, 32052607 - 32052508
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| |  |||| ||| ||||| |||||| ||||||| ||||| |||||||| ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  32052607 gcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 32052508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 230
Target Start/End: Complemental strand, 33735696 - 33735597
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| |  |||| ||| ||||| |||||| ||||||| ||||| |||||||| ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  33735696 gcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 33735597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 7015509 - 7015575
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatc 197  Q
    ||||||||| |  |||| ||| ||||| |||||||||||||| ||||||||| |||| |||||||||    
T  7015509 gcttaaataggtctttcgtccctgcaaatataggccatttgaattttcatccatgaagttactaatc 7015575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 31118969 - 31119019
Alignment:
Q  144 tttcatccttgcaattataggccatttgatttttcatccctgaacttacta 194  Q
    |||| ||| ||||| |||||||||||||| |||||||||||||| ||||||    
T  31118969 tttcgtccctgcaaatataggccatttgaattttcatccctgaagttacta 31119019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 18934713 - 18934793
Alignment:
Q  130 agcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcc 210  Q
    |||||||||| |  |||||||| ||||| |||| | ||||||| ||||| ||| |||| |||||||||||  |||||||||    
T  18934713 agcttaaatatgtctttcatccctgcaaatataagtcatttgaattttcgtccatgaagttactaatcctttcattttgcc 18934793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 160
Target Start/End: Original strand, 19892294 - 19892338
Alignment:
Q  117 tttattttattttag-cttaaatacgcatttcatccttgcaatta 160  Q
    ||||||||||||||| |||||||| | ||||||||||||||||||    
T  19892294 tttattttattttagacttaaatatgtatttcatccttgcaatta 19892338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 25253469 - 25253401
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcct 199  Q
    ||||||||| |  |||| ||| ||||| |||||| ||||||| ||||| |||||||| |||||||||||    
T  25253469 gcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatcct 25253401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 25317260 - 25317192
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcct 199  Q
    ||||||||| |  |||| ||| ||||| |||||| ||||||| ||||| |||||||| |||||||||||    
T  25317260 gcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatcct 25317192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 7e-36; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 122 - 238
Target Start/End: Complemental strand, 25624541 - 25624425
Alignment:
Q  122 tttattttagcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaat 221  Q
    |||||||| ||||||||| ||||||||||| || ||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||| | |||||||    
T  25624541 tttattttggcttaaatatgcatttcatccctgtaattataggtcatttgatttttcatccctgagcttactaatcctcccatttttcccctgtaaaaat 25624442  T
Q  222 taatcatttaagatttc 238  Q
    ||||||||||| |||||    
T  25624441 taatcatttaaaatttc 25624425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 131 - 230
Target Start/End: Original strand, 24387352 - 24387451
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||    
T  24387352 gcttaaatatgcatttcatccctgcaattataggccatttaatttttcatccctgagcttactaatcctcccattttgtccatgtaaaaattaatcattt 24387451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 131 - 238
Target Start/End: Original strand, 25623289 - 25623396
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| ||||||||||| |  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||    
T  25623289 gcttaaatatgcatttcatccctataattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 25623388  T
Q  231 aagatttc 238  Q
    || |||||    
T  25623389 aaaatttc 25623396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 131 - 231
Target Start/End: Complemental strand, 24388355 - 24388255
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| ||||||||||| |||||||||| || |||||||||||||||||||| |||||||||||| ||||||||||  | ||||||||||||||||    
T  24388355 gcttaaatatgcatttcatccctgcaattataagcaatttgatttttcatccctgagcttactaatccttccattttgccattgtaaaaattaatcattt 24388256  T
Q  231 a 231  Q
    |    
T  24388255 a 24388255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 119 - 211
Target Start/End: Original strand, 20101758 - 20101851
Alignment:
Q  119 tattttattttag-cttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||| ||||||| |||||||| || |||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20101758 tatttaattttaggcttaaatatgcttttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgccc 20101851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 20982525 - 20982605
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||||||| || |||||||| || ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  20982525 gcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgccc 20982605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 29957818 - 29957898
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||||||| || |||||||| || ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  29957818 gcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgccc 29957898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 120 - 211
Target Start/End: Complemental strand, 20983371 - 20983280
Alignment:
Q  120 attttattttagcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||| |||| ||||||||| || |||||||| || |||||||| || |||||||||||||||||||||||||||||||| |||||||||||    
T  20983371 atttttttttggcttaaatatgcttttcatccctgtaattatagaccgtttgatttttcatccctgaacttactaatccttccattttgccc 20983280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 131 - 213
Target Start/End: Complemental strand, 20103243 - 20103161
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccat 213  Q
    ||||||||| || ||| |||| || |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  20103243 gcttaaatatgctttttatccctgtaattataggccattagatttttcatccctgagcttactaatcctcccattttgcccat 20103161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 131 - 230
Target Start/End: Complemental strand, 29958646 - 29958547
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| |  |||||||| || ||||||||||  |||||||||||||||||||||||||||||||| ||||||||||| |||||  | |||||||||    
T  29958646 gcttaaatatgtttttcatccctgtaattataggctgtttgatttttcatccctgaacttactaatccttccattttgcccctataattactaatcattt 29958547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 203
Target Start/End: Original strand, 43236509 - 43236577
Alignment:
Q  135 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctccca 203  Q
    ||||| |||||| |||| ||||| ||||||||||||||  |||||||||||||||||||||||||||||    
T  43236509 aaatatgcattttatccctgcaaatataggccatttgaaatttcatccctgaacttactaatcctccca 43236577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 230
Target Start/End: Complemental strand, 19620882 - 19620793
Alignment:
Q  141 gcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||| ||| | ||| |||||| |||||||  ||||||||||||||||||||||||| ||||||||||| |  ||| |||||||||||    
T  19620882 gcatttcgtccctacaaatataggtcatttgaaatttcatccctgaacttactaatccttccattttgcccctgcaaatattaatcattt 19620793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 23206496 - 23206428
Alignment:
Q  142 catttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcc 210  Q
    ||||||||| |||||| |||||| |||||||  |||||||| |||| |||||||||||| |||||||||    
T  23206496 catttcatctttgcaaatatagggcatttgaaatttcatccttgaagttactaatcctctcattttgcc 23206428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 23678100 - 23678032
Alignment:
Q  142 catttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcc 210  Q
    ||||||||| |||||| |||||| |||||||  |||||||| |||| |||||||||||| |||||||||    
T  23678100 catttcatctttgcaaatatagggcatttgaaatttcatccttgaagttactaatcctctcattttgcc 23678032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 43237815 - 43237747
Alignment:
Q  135 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctccca 203  Q
    ||||| ||||||  ||| ||||| ||||||||||||||  ||| |||||||||||||||||||||||||    
T  43237815 aaatatgcattttgtccctgcaaatataggccatttgaaattttatccctgaacttactaatcctccca 43237747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 230
Target Start/End: Original strand, 10446833 - 10446932
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| |  |||| ||| ||||| |||||||||||||| ||||| |||||||| ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  10446833 gcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 10446932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 230
Target Start/End: Complemental strand, 16367333 - 16367247
Alignment:
Q  144 tttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    |||| ||| ||||| |||||||||||||| ||||| |||||||| ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  16367333 tttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaatattaatcattt 16367247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 199
Target Start/End: Original strand, 21103108 - 21103150
Alignment:
Q  157 attataggccatttgatttttcatccctgaacttactaatcct 199  Q
    |||||||||| |||| |||||||||||||||||||||||||||    
T  21103108 attataggccgtttggtttttcatccctgaacttactaatcct 21103150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 208
Target Start/End: Complemental strand, 9694125 - 9694048
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttg 208  Q
    ||||||||| |  |||| ||| ||||| |||||| ||||||| ||||| |||||||| ||||||||||| ||||||||    
T  9694125 gcttaaataggtctttcgtccatgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccattttg 9694048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 1149938 - 1150006
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcct 199  Q
    ||||||||| | ||||| ||| ||||| |||||| ||||||| ||||| |||||||| |||||||||||    
T  1149938 gcttaaataggtatttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatcct 1150006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 230
Target Start/End: Original strand, 20911131 - 20911230
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| |  |||| ||| ||||| |||||| ||||||| ||||| |||||||| ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  20911131 gcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 20911230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 203
Target Start/End: Original strand, 7981070 - 7981120
Alignment:
Q  153 tgcaattataggccatttgatttttcatccctgaacttactaatcctccca 203  Q
    ||||| |||||| |||||||  ||||||||| |||||||||||||||||||    
T  7981070 tgcaactataggtcatttgaaatttcatccccgaacttactaatcctccca 7981120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 230
Target Start/End: Original strand, 28599441 - 28599527
Alignment:
Q  144 tttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    |||| ||||||||| |||||  ||||||| ||||| ||| |||| ||||||||||| ||||||||||  |  ||| |||||||||||    
T  28599441 tttcgtccttgcaaatatagatcatttgaattttcgtccatgaagttactaatccttccattttgccattgcaaatattaatcattt 28599527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 17580505 - 17580452
Alignment:
Q  144 tttcatccttgcaattataggccatttgatttttcatccctgaacttactaatc 197  Q
    |||||||||||||| |||||  ||||||| ||||| |||||||| |||||||||    
T  17580505 tttcatccttgcaaatatagatcatttgaattttcgtccctgaagttactaatc 17580452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 210
Target Start/End: Complemental strand, 33882981 - 33882892
Alignment:
Q  122 tttattttag-cttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcc 210  Q
    |||||||||| || ||||| ||||||||||| ||||| |||| | |||||||  ||||||   |||  ||||||||||||||||||||||    
T  33882981 tttattttagactaaaatatgcatttcatccctgcaaatataaggcatttgaaatttcatatatgaggttactaatcctcccattttgcc 33882892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 7983905 - 7983837
Alignment:
Q  135 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctccca 203  Q
    ||||| ||||||||||   |||| |||||| |||||||  |||||||  ||||||||||||||||||||    
T  7983905 aaatatgcatttcatctcagcaaatataggtcatttgaaatttcatctatgaacttactaatcctccca 7983837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 32519156 - 32519224
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcct 199  Q
    ||||||||| |  |||| ||| ||||| |||||| ||||||| ||||| |||||||| |||||||||||    
T  32519156 gcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaaattactaatcct 32519224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 4e-34; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 133 - 238
Target Start/End: Original strand, 25064936 - 25065041
Alignment:
Q  133 ttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcatttaa 232  Q
    ||||||| ||||||||||| ||||||||||||  |||||||||||||||||||| |||||||||||||||||| || || ||||||||||||||||||||    
T  25064936 ttaaatatgcatttcatccctgcaattataggtaatttgatttttcatccctgatcttactaatcctcccattctgtccctataaaaattaatcatttaa 25065035  T
Q  233 gatttc 238  Q
    ||||||    
T  25065036 gatttc 25065041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 133 - 238
Target Start/End: Complemental strand, 25066055 - 25065950
Alignment:
Q  133 ttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcatttaa 232  Q
    ||||||| ||||||||||| |  ||||||| ||||||||||||||||||||||| |||||||||||| ||||||| ||| | ||||||||||||||||||    
T  25066055 ttaaatatgcatttcatccctataattataagccatttgatttttcatccctgagcttactaatccttccattttacccctgtaaaaattaatcatttaa 25065956  T
Q  233 gatttc 238  Q
    ||||||    
T  25065955 gatttc 25065950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 131 - 232
Target Start/End: Original strand, 13295136 - 13295237
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| |||||||| || || ||||||||| |||||||||||||| |||||| |||||||||||| ||||||||||| | ||||||||||||||||    
T  13295136 gcttaaatatgcatttcacccctgtaattataggtcatttgatttttcacccctgagcttactaatccttccattttgcccttgtaaaaattaatcattt 13295235  T
Q  231 aa 232  Q
    ||    
T  13295236 aa 13295237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 131 - 230
Target Start/End: Original strand, 49093042 - 49093141
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||| | || |||||||| || ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||  | |||||||||    
T  49093042 gcttaaacatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccatgtaattactaatcattt 49093141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 211
Target Start/End: Original strand, 32619389 - 32619465
Alignment:
Q  135 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||| || |||||||| || |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32619389 aaatatgcttttcatccctgtaattatgggccatttgatttttcatccctgagcttactaatcctcccattttgccc 32619465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 211
Target Start/End: Complemental strand, 46282888 - 46282812
Alignment:
Q  135 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||| || |||||||| || ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  46282888 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgccc 46282812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 131 - 230
Target Start/End: Original strand, 2828194 - 2828293
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| |||||||||||||||||||||||  ||||||||||||||||| | |||||||||||||| | ||||||||  |  ||| |||||||||||    
T  2828194 gcttaaatatgcatttcatccttgcaattatagatcatttgatttttcatccataaacttactaatccttctattttgcctctgcaaatattaatcattt 2828293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 135 - 210
Target Start/End: Original strand, 32238704 - 32238779
Alignment:
Q  135 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcc 210  Q
    ||||| ||||||||||| ||||| ||||||| ||||||  ||||||||||||||||||||||||||||||||||||    
T  32238704 aaatatgcatttcatccctgcaaatataggctatttgaaatttcatccctgaacttactaatcctcccattttgcc 32238779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 32622442 - 32622375
Alignment:
Q  144 tttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    |||||||| || |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32622442 tttcatccctgtaattatgggccatttgatttttcatccctgagcttactaatcctcccattttgccc 32622375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 135 - 210
Target Start/End: Complemental strand, 50063043 - 50062968
Alignment:
Q  135 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcc 210  Q
    ||||| || |||||||| || ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  50063043 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcc 50062968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 51935303 - 51935218
Alignment:
Q  126 ttttagcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    |||| ||||||||| || |||||||| || ||||||| | ||||||||||||||||||||| ||| ||||||||||||||||||||    
T  51935303 ttttggcttaaatatgcttttcatccatgtaattatatgtcatttgatttttcatccctgagctttctaatcctcccattttgccc 51935218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 46282072 - 46282152
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||||||| |  |||||||| || ||||||||| | |||||||||||||||||||||||||||||||| |||||||||||    
T  46282072 gcttaaatatgtttttcatccctgtaattataggtcgtttgatttttcatccctgaacttactaatccttccattttgccc 46282152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 131 - 202
Target Start/End: Complemental strand, 13295679 - 13295608
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctccc 202  Q
    ||||||||| ||||||||||| || |||||||||||||||||||||||||| |||| |||||||| ||||||    
T  13295679 gcttaaatatgcatttcatccctgtaattataggccatttgatttttcatctctgagcttactaaccctccc 13295608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 135 - 237
Target Start/End: Complemental strand, 6345732 - 6345630
Alignment:
Q  135 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcatttaaga 234  Q
    ||||| ||||||||||| ||||||||  || |||||||  ||||||||||||||||||||||||| ||||||||||| |  ||| ||||| ||||||| |    
T  6345732 aaatatgcatttcatccctgcaattaggggtcatttgaaatttcatccctgaacttactaatccttccattttgcccctgcaaatattaagcatttaaaa 6345633  T
Q  235 ttt 237  Q
    |||    
T  6345632 ttt 6345630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 211
Target Start/End: Original strand, 6344260 - 6344336
Alignment:
Q  135 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||| ||||||||||| || |||||  || |||||||  |||||||| ||||||||||||||||||||||||||||    
T  6344260 aaatatgcatttcatccctgtaattaggggtcatttgaaatttcatccatgaacttactaatcctcccattttgccc 6344336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 210
Target Start/End: Complemental strand, 24701652 - 24701573
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcc 210  Q
    ||||||||| |  |||||||| ||||| |||| ||||||||| ||||| |||||||| ||||||||||| ||||||||||    
T  24701652 gcttaaataggtctttcatccctgcaaatataagccatttgaattttcgtccctgaagttactaatccttccattttgcc 24701573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 168 - 211
Target Start/End: Complemental strand, 49093875 - 49093832
Alignment:
Q  168 tttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  49093875 tttgatttttcatccctgaacttactaatccttccattttgccc 49093832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 29042945 - 29042879
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatc 197  Q
    ||||||||| |  |||||||||||||| |||||| ||||||| |||||||||||||| |||||||||    
T  29042945 gcttaaataggtctttcatccttgcaaatataggtcatttgaattttcatccctgaagttactaatc 29042879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 230
Target Start/End: Complemental strand, 2829645 - 2829539
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgat-------ttttcatccctgaacttactaatcctcccattttgcccatataaaaatta 223  Q
    ||||||||| ||||||||||| | |||||||||| ||||||||       ||||||||| ||| |||||||||||||||||||| ||| |  ||| ||||    
T  2829645 gcttaaatatgcatttcatccctacaattataggtcatttgatatttgatttttcatccttgagcttactaatcctcccattttacccctgcaaatatta 2829546  T
Q  224 atcattt 230  Q
    |||||||    
T  2829545 atcattt 2829539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 230
Target Start/End: Complemental strand, 5183894 - 5183790
Alignment:
Q  126 ttttagcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaat 225  Q
    |||| |||||||||||  |||  ||| ||||| |||||||||||||| ||||| |||||||| |||| |||||| ||| ||||||| |  ||| ||||||    
T  5183894 ttttggcttaaatacgtcttttgtccctgcaaatataggccatttgaattttcgtccctgaagttacgaatccttccaatttgcccctgcaaatattaat 5183795  T
Q  226 cattt 230  Q
    |||||    
T  5183794 cattt 5183790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 10019728 - 10019657
Alignment:
Q  159 tataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    |||||| ||||||| |||||||||||||| ||||||||||| ||||||||||  |  ||| |||||||||||    
T  10019728 tataggtcatttgaattttcatccctgaagttactaatccttccattttgccattgcaaatattaatcattt 10019657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 117 - 199
Target Start/End: Complemental strand, 29043152 - 29043070
Alignment:
Q  117 tttattttattttagcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcct 199  Q
    |||||||||| || ||||||||| |  |||| ||  ||||| |||||||||||||| ||||| |||||||| |||||||||||    
T  29043152 tttattttatcttggcttaaatatgtctttcgtctctgcaaatataggccatttgaattttcgtccctgaagttactaatcct 29043070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 5926909 - 5926837
Alignment:
Q  126 ttttagcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcc 198  Q
    |||| ||||||||| |  |||| ||| ||||| ||||| |||||||| |||||||||||||| ||||||||||    
T  5926909 ttttggcttaaataggtctttcgtccctgcaaatatagaccatttgaattttcatccctgaagttactaatcc 5926837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 28534868 - 28534820
Alignment:
Q  159 tataggccatttgatttttcatccctgaacttactaatcctcccatttt 207  Q
    |||||| |||||||  ||||||||||||||||||||||||| |||||||    
T  28534868 tatagggcatttgaaatttcatccctgaacttactaatccttccatttt 28534820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 230
Target Start/End: Complemental strand, 29981022 - 29980922
Alignment:
Q  130 agcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcatt 229  Q
    |||||||||| |  |||| || |||||| |||||| ||||||| ||||| |||| ||| ||||||||||| ||| ||||||| |  ||| ||||||||||    
T  29981022 agcttaaataggtctttcgtctttgcaaatataggtcatttgaattttcgtcccggaagttactaatccttccaatttgcccctgcaaatattaatcatt 29980923  T
Q  230 t 230  Q
    |    
T  29980922 t 29980922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 50062246 - 50062282
Alignment:
Q  173 tttttcatccctgaacttactaatcctcccattttgc 209  Q
    ||||||||||||||||||||||||||| |||||||||    
T  50062246 tttttcatccctgaacttactaatccttccattttgc 50062282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 230
Target Start/End: Original strand, 1040299 - 1040398
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| |  |||| ||||||||| |||| ||||||||| ||||  |||||||| ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  1040299 gcttaaatatgtctttcgtccttgcaaatataagccatttgaatttttgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 1040398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 230
Target Start/End: Original strand, 1047205 - 1047304
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| |  |||| ||||||||| |||| ||||||||| ||||  |||||||| ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  1047205 gcttaaatatgtctttcgtccttgcaaatataagccatttgaatttttgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 1047304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 230
Target Start/End: Complemental strand, 2953847 - 2953748
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| |  |||| ||| ||||| |||||| ||||||| ||||| |||||||| ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  2953847 gcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 2953748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 230
Target Start/End: Complemental strand, 19755788 - 19755689
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| |  |||| ||| ||||| |||||| ||||||| |||| ||||||||| ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  19755788 gcttaaataggtctttcgtccctgcaaatataggtcatttgaatttttatccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 19755689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 230
Target Start/End: Complemental strand, 46850041 - 46849942
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| |  |||| ||| ||||| |||||| ||||||| ||||| |||||||| ||||| ||||| ||| ||||||| |  ||| |||||||||||    
T  46850041 gcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactgatccttccaatttgcccctgcaaatattaatcattt 46849942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 210
Target Start/End: Original strand, 52563656 - 52563731
Alignment:
Q  135 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcc 210  Q
    ||||| ||||||||||| ||||| ||||||  |||||   |||||||| |||  ||||||||||||||||||||||    
T  52563656 aaatatgcatttcatccctgcaaatatagggtatttggaatttcatccttgaggttactaatcctcccattttgcc 52563731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 230
Target Start/End: Original strand, 5926533 - 5926619
Alignment:
Q  144 tttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    |||| ||| ||||| |||||| ||||||| ||||| |||||||| ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  5926533 tttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaacattaatcattt 5926619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 36381509 - 36381451
Alignment:
Q  143 atttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcc 201  Q
    ||||||||| ||||| ||||||| ||||||  ||| |||| ||||||||||||||||||    
T  36381509 atttcatccctgcaaatataggctatttgaaattttatccttgaacttactaatcctcc 36381451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 46849852 - 46849918
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatc 197  Q
    ||||||||| |  |||||||||||||| |||| | ||||||| ||||| |||||||| |||||||||    
T  46849852 gcttaaataggtctttcatccttgcaaatatatgtcatttgaattttcgtccctgaagttactaatc 46849918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 26953102 - 26953170
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcct 199  Q
    ||||||||| |  |||| ||||||||| ||||| | |||||| ||||| |||||||| |||||||||||    
T  26953102 gcttaaatatgtctttcgtccttgcaaatatagactatttgaattttcgtccctgaagttactaatcct 26953170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 7e-33; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 131 - 230
Target Start/End: Complemental strand, 33401225 - 33401126
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| || |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||    
T  33401225 gcttaaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgaacttactaatcctcccattttgcccctgtaaaagttaatcattt 33401126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 131 - 230
Target Start/End: Complemental strand, 17784484 - 17784385
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| || |||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |  ||| |||||||||||    
T  17784484 gcttaaatatgcttttcatccctgcaatgataggccatttgatttttcatccatgaacttactaatcctcccattttgcccctgcaaatattaatcattt 17784385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 131 - 230
Target Start/End: Original strand, 4116800 - 4116899
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| |  |||||||| || ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| | ||||| ||||||||||    
T  4116800 gcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaagttaatcattt 4116899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 131 - 230
Target Start/End: Complemental strand, 4117646 - 4117547
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| |  |||||||| || ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| | ||||| ||||||||||    
T  4117646 gcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaagttaatcattt 4117547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 8427459 - 8427384
Alignment:
Q  136 aatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    |||| ||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  8427459 aatatgcatttcatccctgcaattataggtcatttgatttttcatccctggacttactaatcctcccattttgccc 8427384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 131 - 230
Target Start/End: Original strand, 14656481 - 14656580
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| || |||||||| |||||||||||||  ||||||||||||||||||| |||||||||||||| ||||||||| | ||||| ||||||||||    
T  14656481 gcttaaatatgcttttcatccctgcaattataggctgtttgatttttcatccctgagcttactaatcctcctattttgcccctgtaaaagttaatcattt 14656580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 33399962 - 33400047
Alignment:
Q  126 ttttagcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    |||| ||||||||| || |||||||| || ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  33399962 ttttggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgccc 33400047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 144 - 207
Target Start/End: Complemental strand, 1661516 - 1661453
Alignment:
Q  144 tttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccatttt 207  Q
    |||||||| || ||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  1661516 tttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccatttt 1661453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 131 - 211
Target Start/End: Complemental strand, 14657308 - 14657228
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||||||| || |||||||| |  ||||||||||| |||||||||| |||||||| |||||||||||| |||||||||||    
T  14657308 gcttaaatatgcttttcatccctataattataggccgtttgattttttatccctgaccttactaatccttccattttgccc 14657228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 8427201 - 8427281
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||||||| |  |||||||||||||| |||||| ||||||| ||||| || || || |||||||||||||||||||||||    
T  8427201 gcttaaatatgtctttcatccttgcaaatataggtcatttgaattttcgtctctcaagttactaatcctcccattttgccc 8427281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 130 - 230
Target Start/End: Original strand, 23291744 - 23291844
Alignment:
Q  130 agcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcatt 229  Q
    |||||||||| |  |||| ||| | ||| |||||||||||||| |||||||||||||| ||||||||||| ||| | ||||| |  ||| ||||||||||    
T  23291744 agcttaaatatgtctttcgtccctacaaatataggccatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcatt 23291843  T
Q  230 t 230  Q
    |    
T  23291844 t 23291844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 230
Target Start/End: Original strand, 13480209 - 13480308
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| |  |||| ||| ||||| |||||||||||||| ||||| |||||||| ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  13480209 gcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 13480308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 230
Target Start/End: Complemental strand, 13480591 - 13480492
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| |  |||| |||||| || |||||| ||||||| ||||| |||||||| ||||||||||| ||| | ||||| || ||| |||||||||||    
T  13480591 gcttaaatatgtctttcgtccttgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctacaaatattaatcattt 13480492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 5064371 - 5064435
Alignment:
Q  166 catttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||| ||||| |||||||| ||||||||||||||| ||||||| |  ||| |||||||||||    
T  5064371 catttgaattttcgtccctgaagttactaatcctcccaatttgcccctgcaaatattaatcattt 5064435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 230
Target Start/End: Original strand, 32337578 - 32337664
Alignment:
Q  144 tttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    |||| ||| ||||| ||||| |||||||| ||||| |||||||| ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  32337578 tttcgtccctgcaaatatagaccatttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaatattaatcattt 32337664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 199
Target Start/End: Complemental strand, 3299943 - 3299874
Alignment:
Q  130 agcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcct 199  Q
    |||||||||| | ||||| ||| ||||| |||||| ||||||| ||||| ||| |||| |||||||||||    
T  3299943 agcttaaatatgtatttcgtccctgcaaatataggtcatttgaattttcgtccttgaagttactaatcct 3299874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 230
Target Start/End: Complemental strand, 5064696 - 5064619
Alignment:
Q  153 tgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||| |||||||||||||| ||||| |||||||  ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  5064696 tgcaaatataggccatttgaattttcgtccctgaggttactaatccttccaatctgcccctgcaaatattaatcattt 5064619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 23292132 - 23292059
Alignment:
Q  126 ttttagcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcct 199  Q
    |||| ||||||||| |  |||| ||| ||||| |||||| ||||||| ||||| |||||||| |||||||||||    
T  23292132 ttttggcttaaatatgtctttcgtccatgcaaatataggtcatttgaattttcgtccctgaagttactaatcct 23292059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 15819873 - 15819805
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcct 199  Q
    ||||||||| |  |||| ||| ||||| |||||| ||||||| ||||| |||||||| |||||||||||    
T  15819873 gcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatcct 15819805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 16704692 - 16704624
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcct 199  Q
    ||||||||| |  |||| ||| ||||| |||||||||||||| ||||| ||| |||| |||||||||||    
T  16704692 gcttaaataggtctttcgtccctgcaaatataggccatttgaattttcgtccttgaagttactaatcct 16704624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 20995039 - 20994975
Alignment:
Q  166 catttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||| |||||||||||||| ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  20995039 catttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 20994975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 7e-33; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 131 - 238
Target Start/End: Complemental strand, 32717204 - 32717097
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| ||||||||||| || ||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||| | ||||||||||||||||    
T  32717204 gcttaaatatgcatttcatccctgtaattataggtcatttgatttttcatccctaaacttactaatccttccattttgcccctgtaaaaattaatcattt 32717105  T
Q  231 aagatttc 238  Q
    || |||||    
T  32717104 aaaatttc 32717097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 131 - 237
Target Start/End: Complemental strand, 29193092 - 29192986
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| | ||||||||||| ||||    
T  29193092 gcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccatttcgcccctgtaaaaattaattattt 29192993  T
Q  231 aagattt 237  Q
    || ||||    
T  29192992 aaaattt 29192986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 29192040 - 29192143
Alignment:
Q  135 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcatttaaga 234  Q
    ||||| ||||||||||| || ||||||||||||||||||||||||| ||||| |||||||||||| || |||||||| | |||||||||||||||||| |    
T  29192040 aaatatgcatttcatccctgtaattataggccatttgatttttcattcctgagcttactaatccttccgttttgcccctgtaaaaattaatcatttaaaa 29192139  T
Q  235 tttc 238  Q
    ||||    
T  29192140 tttc 29192143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 45279388 - 45279303
Alignment:
Q  126 ttttagcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    |||| ||||||||| || |||||||| || ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  45279388 ttttggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgccc 45279303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 131 - 211
Target Start/End: Complemental strand, 48189198 - 48189118
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||||||| || ||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||    
T  48189198 gcttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgagcttactaatccttccattttgccc 48189118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 144 - 211
Target Start/End: Original strand, 44476063 - 44476130
Alignment:
Q  144 tttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    |||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  44476063 tttcatccctgtaattatgggccatttgatttttcatccctgaacttactaatcctcccattttgccc 44476130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 11026736 - 11026651
Alignment:
Q  126 ttttagcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    |||| ||||||||| || |||||||| || ||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||    
T  11026736 ttttggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttaccaatccttccattttgccc 11026651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 211
Target Start/End: Complemental strand, 2944765 - 2944685
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||||||| || |||||||| || ||||||||||| |||||||||||||||||||||||||||||||  |||||||||||    
T  2944765 gcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccatccattttgccc 2944685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 211
Target Start/End: Complemental strand, 22736789 - 22736709
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||||||| |  |||||||| || ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  22736789 gcttaaatatgtttttcatccctgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgccc 22736709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 211
Target Start/End: Original strand, 37249204 - 37249280
Alignment:
Q  135 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||| || |||||||| |||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||    
T  37249204 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttattaatcctcccattttgccc 37249280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 144 - 211
Target Start/End: Original strand, 1756564 - 1756631
Alignment:
Q  144 tttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||    
T  1756564 tttcatccttgtaattataggccgtttgatttttcatccatgaacttactaatccttccattttgccc 1756631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 144 - 211
Target Start/End: Original strand, 48188392 - 48188459
Alignment:
Q  144 tttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    |||||||| || ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  48188392 tttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgccc 48188459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 131 - 211
Target Start/End: Complemental strand, 1757403 - 1757323
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||||||| |  |||||||| || ||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||    
T  1757403 gcttaaatatgattttcatccctgtaattataggccgtttgatttttcatccatgaacttactaatccttccattttgccc 1757323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 131 - 230
Target Start/End: Original strand, 2943914 - 2944013
Alignment:
Q  131 gcttaaatacgcatttc-atccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcatt 229  Q
    ||||||||| || |||| |||| |||||||||||||| ||||||||||||||| ||| |||||||||||||| ||||||||| | ||||| |||||||||    
T  2943914 gcttaaatatgcttttctatccctgcaattataggccgtttgatttttcatcc-tgagcttactaatcctcctattttgcccctgtaaaagttaatcatt 2944012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 211
Target Start/End: Complemental strand, 37249892 - 37249817
Alignment:
Q  135 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||| || ||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||    
T  37249892 aaatatgcttttcatcct-gcaattataggccgtttgatttttcatccctgagcttactaatcctcccattctgccc 37249817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 211
Target Start/End: Original strand, 43105250 - 43105314
Alignment:
Q  147 catccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||    
T  43105250 catccttgtaattataggccgtttgatttttcatccctgaacttactaatcctttcattttgccc 43105314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 211
Target Start/End: Complemental strand, 43105929 - 43105853
Alignment:
Q  135 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    |||||||  |||||||| || ||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||    
T  43105929 aaatacgtttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatcctttcattttgccc 43105853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 211
Target Start/End: Complemental strand, 44482048 - 44481972
Alignment:
Q  135 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||| || |||||||| || |||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  44482048 aaatatgcttttcatccctgtaattatgggccatttgatttttcatccatgagcttactaatcctcccattttgccc 44481972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 211
Target Start/End: Original strand, 45278549 - 45278625
Alignment:
Q  135 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||| || |||||||| || ||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||    
T  45278549 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaatttactaatccttccattttgccc 45278625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 11025963 - 11026017
Alignment:
Q  156 aattataggccatttgatttttcatccctgaacttactaatcctcccattttgcc 210  Q
    ||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||    
T  11025963 aattataagccgtttgatttttcatccctgaacttactaatccttccattttgcc 11026017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 11312929 - 11312995
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatc 197  Q
    ||||||||| |  |||||||||||||| |||||| ||||||| ||||| |||||||| |||||||||    
T  11312929 gcttaaataagtctttcatccttgcaaatataggtcatttgaattttcgtccctgaagttactaatc 11312995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 21300327 - 21300393
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatc 197  Q
    ||||||||| |  |||||||| ||||| |||||| ||||||| |||||||||||||| |||||||||    
T  21300327 gcttaaataggtctttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatc 21300393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 53037217 - 53037151
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatc 197  Q
    ||||||||| |  |||||||||||||| |||||| ||||||| ||||| |||||||| |||||||||    
T  53037217 gcttaaataggtctttcatccttgcaaatataggtcatttgaattttcgtccctgaagttactaatc 53037151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 238
Target Start/End: Original strand, 32716284 - 32716357
Alignment:
Q  165 ccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcatttaagatttc 238  Q
    ||||||||||||| |||| |||  |||||||||||| |||||| ||| | |||||||||| ||||||| |||||    
T  32716284 ccatttgattttttatccttgagtttactaatcctctcattttacccttgtaaaaattaaccatttaaaatttc 32716357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 55036683 - 55036771
Alignment:
Q  144 tttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcatttaa 232  Q
    |||| ||| ||||| |||||| ||||||| ||||||| |||||| ||||||||||| ||| | ||||| |  ||| |||||||||||||    
T  55036683 tttcgtccctgcaaatataggtcatttgaattttcattcctgaagttactaatccttccaatctgcccctgcaaatattaatcatttaa 55036771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 230
Target Start/End: Original strand, 1741388 - 1741487
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| |  |||| ||| ||||| |||||| ||||||| ||||| |||||||| ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  1741388 gcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccttgcaaatattaatcattt 1741487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 230
Target Start/End: Complemental strand, 10998234 - 10998157
Alignment:
Q  153 tgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||| |||||| ||||||| ||||| |||||||| ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  10998234 tgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 10998157  T

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Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 22735403 - 22735440
Alignment:
Q  174 ttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  22735403 ttttcatccctaagcttactaatcctcccattttgccc 22735440  T

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Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 46670610 - 46670561
Alignment:
Q  159 tataggccatttgatttttcatccctgaacttactaatcctcccattttg 208  Q
    |||||| ||||||| |||||||||||||| |||||||| || ||||||||    
T  46670610 tataggtcatttgaattttcatccctgaagttactaattcttccattttg 46670561  T

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Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 53037028 - 53037096
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcct 199  Q
    ||||||||| |  |||||||| || || |||||| ||||||| ||||| |||||||| |||||||||||    
T  53037028 gcttaaataagtctttcatccctgtaaatataggtcatttgaattttcgtccctgaagttactaatcct 53037096  T

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Target: scaffold1493 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold1493
Description:

Target: scaffold1493; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 120 - 230
Target Start/End: Original strand, 582 - 693
Alignment:
Q  120 attttattttag-cttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaa 218  Q
    |||||||||||| |||||||| ||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |  |||    
T  582 attttattttaggcttaaatatgcatttcatcactgcaattataggtcatttgatttttcatccctgaacttactaatcctctcattttgcccctgcaaa 681  T
Q  219 aattaatcattt 230  Q
     |||||||||||    
T  682 tattaatcattt 693  T

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Target: scaffold0009 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 119 - 230
Target Start/End: Original strand, 260990 - 261101
Alignment:
Q  119 tattttattttagcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaa 218  Q
    ||||||||||  ||||||||| ||||||||||| |||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||| |  |||    
T  260990 tattttatttaggcttaaatatgcatttcatccctgcaattataggtcatttgatttttcatccatgaatttactaatcctcccattttgcccctgcaaa 261089  T
Q  219 aattaatcattt 230  Q
     |||||||||||    
T  261090 tattaatcattt 261101  T

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Target: scaffold0009; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 131 - 232
Target Start/End: Complemental strand, 262540 - 262439
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| ||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |  ||| |||||||||||    
T  262540 gcttaaatatgcatttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccatttttcccctgcaaatattaatcattt 262441  T
Q  231 aa 232  Q
    ||    
T  262440 aa 262439  T

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Target: chr4 (Bit Score: 66; Significance: 3e-29; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 131 - 232
Target Start/End: Original strand, 23454955 - 23455056
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| | |||||||||  |||||    
T  23454955 gcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcatcccattttgcccctgtaaaaattacccattt 23455054  T
Q  231 aa 232  Q
    ||    
T  23455055 aa 23455056  T

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Target: chr4; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 131 - 230
Target Start/End: Complemental strand, 23455788 - 23455689
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| ||||||||||| || ||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||  | ||||||||||||||||    
T  23455788 gcttaaatatgcatttcatccctgtaattataggtcatttgatttttcattcctgagcttactaatcctcccattttgccactgtaaaaattaatcattt 23455689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 131 - 230
Target Start/End: Complemental strand, 53477179 - 53477080
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| ||||||||||  |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |  ||| |||||||||||    
T  53477179 gcttaaatatgcatttcatctctgcaattataggtcatttgatttttcatctctgaacttactaatcctcccattttgcccctgcaaatattaatcattt 53477080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 54591682 - 54591597
Alignment:
Q  126 ttttagcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    |||| ||||||||| ||||||||||| |||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||    
T  54591682 ttttggcttaaatatgcatttcatccctgcaattatagatcatttgatttttcatccctgaacttactaaacctcccattttgccc 54591597  T

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Target: chr4; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 38813555 - 38813635
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||||||| || |||||||| || ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  38813555 gcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgccc 38813635  T

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Target: chr4; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 131 - 211
Target Start/End: Complemental strand, 38814426 - 38814346
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||||||| || ||||||||||| |||| |||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  38814426 gcttaaatatgcttttcatccttgtaattttaggccgtttgatttttcatccctgaacttactaatccttccattttgccc 38814346  T

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Target: chr4; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 135 - 211
Target Start/End: Complemental strand, 38982691 - 38982615
Alignment:
Q  135 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||| || |||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  38982691 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgccc 38982615  T

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Target: chr4; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 133 - 230
Target Start/End: Original strand, 54590146 - 54590243
Alignment:
Q  133 ttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||| ||||||||||| |||||||||||| ||||||||||||||||  ||||||||||||| || ||||||||||  || ||| |||||||||||    
T  54590146 ttaaatatgcatttcatccctgcaattataggtcatttgatttttcatctttgaacttactaattcttccattttgcctctacaaatattaatcattt 54590243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 56556583 - 56556663
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||||||| || |||||||| || ||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||    
T  56556583 gcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccatgaacttactaatccttccattttgccc 56556663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 211
Target Start/End: Complemental strand, 56557436 - 56557344
Alignment:
Q  119 tattttattttagcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    |||||| ||| |||||||||| || |||||||| |  ||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||    
T  56557436 tattttttttaagcttaaatatgcttttcatccctctaattataggccgtttgatttttcatccatgaacttactaatccttccattttgccc 56557344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 131 - 205
Target Start/End: Complemental strand, 13336937 - 13336863
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccatt 205  Q
    ||||||||| ||||||||||| ||||| |||||| |||||||  |||||||||||||||||||||||||||||||    
T  13336937 gcttaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctgaacttactaatcctcccatt 13336863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 52815664 - 52815744
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||||||| || |||||||| || ||||||||||| |||||||||| |||||||||||||||||||||  ||||||||||    
T  52815664 gcttaaatatgcttttcatccctgtaattataggccgtttgattttttatccctgaacttactaatcctttcattttgccc 52815744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 131 - 211
Target Start/End: Complemental strand, 52816522 - 52816442
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||||||| |  |||||||| || ||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||    
T  52816522 gcttaaatatgattttcatccctgtaattataggccgtttgatttttcatctctgaacttactaatccttccattttgccc 52816442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 131 - 211
Target Start/End: Complemental strand, 55013187 - 55013108
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||||||| || |||||||| || |||||||||| |||||||||||||| ||||| |||||||||||||||| |||||||    
T  55013187 gcttaaatatgcttttcatccatgtaattataggctatttgatttttcat-cctgagcttactaatcctcccagtttgccc 55013108  T

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Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 205
Target Start/End: Complemental strand, 22882422 - 22882352
Alignment:
Q  135 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccatt 205  Q
    ||||| ||||||||||| ||||| |||||| |||||||  ||||||||||||||||| |||||||||||||    
T  22882422 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctgaacttaataatcctcccatt 22882352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 205
Target Start/End: Complemental strand, 22934086 - 22934016
Alignment:
Q  135 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccatt 205  Q
    ||||| ||||||||||| ||||| |||||| |||||||  ||||||||||||||||| |||||||||||||    
T  22934086 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctgaacttaataatcctcccatt 22934016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 9254411 - 9254476
Alignment:
Q  135 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctc 200  Q
    ||||| ||||||||||| ||||| ||||||||||||||  |||||||| |||||||||||||||||    
T  9254411 aaatatgcatttcatccctgcaaatataggccatttgaaatttcatccttgaacttactaatcctc 9254476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 230
Target Start/End: Original strand, 12691396 - 12691506
Alignment:
Q  120 attttattttagcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaa 219  Q
    |||||||| | ||||||||| |  |||| ||| ||||| |||||||||||||| ||||| |||||||| ||||||||||| ||| | || || || |||     
T  12691396 attttattatggcttaaataggtctttcgtccatgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgtccctacaaat 12691495  T
Q  220 attaatcattt 230  Q
    |||||||||||    
T  12691496 attaatcattt 12691506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 22249927 - 22249993
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatc 197  Q
    ||||||||| |  |||||||| ||||| |||||| ||||||| |||||||||||||| |||||||||    
T  22249927 gcttaaataagtctttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatc 22249993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 135 - 205
Target Start/End: Original strand, 22881172 - 22881242
Alignment:
Q  135 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccatt 205  Q
    ||||| ||||||||||| || || ||||||||||||||  ||||||| ||| | |||||||||||||||||    
T  22881172 aaatatgcatttcatccctgtaaatataggccatttgaaatttcatctctgcatttactaatcctcccatt 22881242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 135 - 205
Target Start/End: Original strand, 22932836 - 22932906
Alignment:
Q  135 aaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccatt 205  Q
    ||||| ||||||||||| || || ||||||||||||||  ||||||| ||| | |||||||||||||||||    
T  22932836 aaatatgcatttcatccctgtaaatataggccatttgaaatttcatctctgcatttactaatcctcccatt 22932906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 8287316 - 8287248
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcct 199  Q
    ||||||||| |  |||| ||| ||||| |||||||||||||| ||||| |||||||| |||||||||||    
T  8287316 gcttaaataggtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatcct 8287248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 230
Target Start/End: Original strand, 32846362 - 32846462
Alignment:
Q  130 agcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcatt 229  Q
    |||||||||| |  |||| | ||||||| |||||||||||||| ||||| | |||||| ||| ||||||| ||||||||||  |  ||| ||||||||||    
T  32846362 agcttaaataggtctttcgtgcttgcaaatataggccatttgaattttcgttcctgaagttattaatccttccattttgccattgcaaatattaatcatt 32846461  T
Q  230 t 230  Q
    |    
T  32846462 t 32846462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 53475832 - 53475900
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcct 199  Q
    ||||||||| |  ||||||| |||||| ||||| |||||||| ||||||||||| || |||||||||||    
T  53475832 gcttaaatatgtctttcatctttgcaaatatagaccatttgagttttcatccctaaagttactaatcct 53475900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 230
Target Start/End: Complemental strand, 22250116 - 22250017
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| |  |||| ||| ||||| |||||||||||||| ||||| |||||||| |||||||| || ||| | ||||| |  ||| |||||||||||    
T  22250116 gcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaaattactaattcttccaatatgcccctgcaaatattaatcattt 22250017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 230
Target Start/End: Complemental strand, 53559770 - 53559671
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| |  |||| ||| ||||| |||||||||||||| ||||| |||||||| ||||||||| | ||| | ||||| |  ||| |||||||||||    
T  53559770 gcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatcgttccaatctgcccctgcaaatattaatcattt 53559671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 230
Target Start/End: Original strand, 54961432 - 54961531
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| |  |||| ||| ||||| ||||| |||||||| ||||| |||||||| ||||||||||| ||| | ||||| |  ||| |||||||||||    
T  54961432 gcttaaataggtctttcgtccctgcaaatatagaccatttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaatattaatcattt 54961531  T

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Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 205
Target Start/End: Complemental strand, 35731031 - 35730970
Alignment:
Q  144 tttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccatt 205  Q
    |||| ||| ||||| |||||| ||||||| ||||| |||||||| ||||||||||| |||||    
T  35731031 tttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccatt 35730970  T

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Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 19740861 - 19740929
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcct 199  Q
    ||||||||| |  |||| ||||||||| |||| | ||||||| ||||| |||||||| |||||||||||    
T  19740861 gcttaaataggtctttcgtccttgcaaatatatgtcatttgaattttcgtccctgaagttactaatcct 19740929  T

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Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 33294526 - 33294458
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcct 199  Q
    ||||||||| |  |||| ||| ||||| ||||||| |||||| ||||| |||||||| |||||||||||    
T  33294526 gcttaaatatgtctttcctccctgcaaatataggcaatttgaattttcgtccctgaagttactaatcct 33294458  T

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Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 37677849 - 37677917
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcct 199  Q
    ||||||||| |  |||| ||| ||||| |||||| ||||||| ||||| |||||||| |||||||||||    
T  37677849 gcttaaataggtctttcttccctgcaaatataggtcatttgaattttcgtccctgaagttactaatcct 37677917  T

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Target: scaffold0182 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 14476 - 14400
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccatttt 207  Q
    ||||||||| || ||||| || || ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14476 gcttaaatatgcttttcacccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccatttt 14400  T

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Target: scaffold0182; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 13135 - 13215
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||||||| || |||||||| || || ||||| ||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  13135 gcttaaatatgcttttcatccctgtaaatatagaccatttgatttttcatctctgagtttagtaatcctcccattttgccc 13215  T

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Target: scaffold0018 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 73110 - 73190
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 211  Q
    ||||||||| || |||||||| || |||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  73110 gcttaaatatgcttttcatccctgtaattatgggccatttgacttttcatccctgagcttactaatcctcccattttgccc 73190  T

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Target: scaffold0206 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 230
Target Start/End: Original strand, 10326 - 10425
Alignment:
Q  131 gcttaaatacgcatttcatccttgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||||| |  |||| ||| ||||| |||||  ||||||| ||||| |||||||| ||||||||||| ||| ||||||| |  ||| |||||||||||    
T  10326 gcttaaataggtctttcgtccctgcaaatatagatcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcattt 10425  T

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Target: scaffold0201 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 14241 - 14177
Alignment:
Q  166 catttgatttttcatccctgaacttactaatcctcccattttgcccatataaaaattaatcattt 230  Q
    ||||||| |||||||| ||||| ||||||||||| ||| | ||||| || ||| |||||||||||    
T  14241 catttgaattttcatcactgaagttactaatccttccaatctgcccctacaaatattaatcattt 14177  T

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