View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21347_low_10 (Length: 523)
Name: NF21347_low_10
Description: NF21347
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21347_low_10 |
 |  |
|
Alignment Details
Target: chr3 (Bit Score: 456; Significance: 0; HSPs: 20)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 456; E-Value: 0
Query Start/End: Original strand, 1 - 480
Target Start/End: Original strand, 20016430 - 20016909
Alignment:
| Q |
1 |
tcgccgatgacagggtaaccacccaaaaccataatatcctccaaagtgattgtagcttcagcaaatggaaacacaaatgtatttgtcttagaacaccatt |
100 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20016430 |
tcgccaatgacagggtaaccacccaaaaccataatatcctccaaagtgattgtagcttcagcaaatggaaacacaaatgtatttgtcttagaacaccatt |
20016529 |
T |
 |
| Q |
101 |
tctccgcaacctcatatagcaagttttgatttctcagtatgcgacacttggtgctcataatagcatcaaagattccaacctgcttccacacagattcatg |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20016530 |
tctccgcaacctcatatagcaagttttgatttctcagtatgcgacacttggtgctcataatagcatcaaagattccaacctgcttccacacagattcata |
20016629 |
T |
 |
| Q |
201 |
ctttggtttaagctgatcaacccaacaaacccatttgtcttgtgggtggcgccacccagtgaaatgaaacttcaaaggcgactcctttggatgaaagaca |
300 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20016630 |
ctttgttttaagctgatcaacccaacaaacccatttgtcttgtgggtggcgccacccagtgaaatgaaacttcaaaggcgactcctttggatgaaagaca |
20016729 |
T |
 |
| Q |
301 |
cgagacattgatgatggattaaaaccaaaaggtgattcatgaatgtaatttgaaatgggttttaaaaaatgggcagttctgagagttgcttcagtgtcac |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20016730 |
cgagacattgatgatggattaaaaccaaaaggtgattcatgaatgtaatttgaaatgggttttaaaaaatgggcagttctgagagttgcttcagtgtcac |
20016829 |
T |
 |
| Q |
401 |
caccagcaggtgagagcatgaaatcttccctcacctccatcatagcattaaatggcttctcattcatcattgatggttgt |
480 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
20016830 |
caccagcaggtgagagcatgaaatcttccctcacctccatgatagcattcaatggcttctcattcatcattgattgttgt |
20016909 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 7 - 443
Target Start/End: Complemental strand, 19812161 - 19811728
Alignment:
| Q |
7 |
atgacagggtaaccacccaaaaccataatatcctccaaagtgattgtagcttcagcaaatggaaacacaaatgtatttgtcttagaacaccatttctccg |
106 |
Q |
| |
|
|||| ||||||||| ||||||||||||||||||||||||||||| || |||||| |||||||||| ||||| || || |||| | ||||||||||||| |
|
|
| T |
19812161 |
atgatagggtaaccccccaaaaccataatatcctccaaagtgatagttgcttcaccaaatggaaaaacaaaggtgttagtctcacaacaccatttctcaa |
19812062 |
T |
 |
| Q |
107 |
caacctcatatagcaagttttgatttctcagtatgcgacacttggtgctcataatagcatcaaagattccaacctgcttccacacagattcatgctttgg |
206 |
Q |
| |
|
||||| || | ||||| ||| ||||| | |||||| |||||||||| |||||||||||||||||||||| | | | |||||||| |||||||| |||||| |
|
|
| T |
19812061 |
caaccccaaagagcaattttagatttttgagtatgtgacacttggtactcataatagcatcaaagattctagctttcttccacaaagattcatactttgg |
19811962 |
T |
 |
| Q |
207 |
tttaagctgatcaacccaacaaacccatttgtcttgtgggtggcgccacccagtgaaatgaaacttcaaaggcgactcctttggatgaaagacacgagac |
306 |
Q |
| |
|
|||||||| ||||||||| | |||||| || ||||||||||| ||||| ||| ||||||| | |||||||| |||| ||| ||| ||| | | ||| |
|
|
| T |
19811961 |
tttaagctcatcaacccatctaacccacttctcttgtgggtgacgccatccactgaaatggattttcaaaggacactcattttgatcaaaaaaagaagat |
19811862 |
T |
 |
| Q |
307 |
attgatgatggattaaaaccaaaaggtgattcatgaatgtaatttgaaatgggttttaaaaaatgggcagttctgagagttgcttcagtgtcaccaccag |
406 |
Q |
| |
|
||| |||||||||| |||||| || |||||||||| | |||||||||||||| | |||||| |||||||||| ||||| ||| ||| |||||| |
|
|
| T |
19811861 |
gatgaaaatggattaaactcaaaagctggttcatgaatggagtttgaaatgggtttaagaaaatgagcagttctgaaagttgaatcactgt---caccag |
19811765 |
T |
 |
| Q |
407 |
caggtgagagcatgaaatcttccctcacctccatcat |
443 |
Q |
| |
|
|||||| ||||||||||||||||| || |||||||| |
|
|
| T |
19811764 |
aaggtgaaagcatgaaatcttccctgacttccatcat |
19811728 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 7 - 443
Target Start/End: Complemental strand, 19838265 - 19837829
Alignment:
| Q |
7 |
atgacagggtaaccacccaaaaccataatatcctccaaagtgattgtagcttcagcaaatggaaacacaaatgtatttgtcttagaacaccatttctccg |
106 |
Q |
| |
|
|||||||||||||| ||||||||||| | ||| |||||||||||||| || ||| |||||||||||||||||||||| |||| | | ||||||||||| |
|
|
| T |
19838265 |
atgacagggtaaccccccaaaaccatgacatcttccaaagtgattgttgcctcaccaaatggaaacacaaatgtattggtctcacagcaccatttctcaa |
19838166 |
T |
 |
| Q |
107 |
caacctcatatagcaagttttgatttctcagtatgcgacacttggtgctcataatagcatcaaagattccaacctgcttccacacagattcatgctttgg |
206 |
Q |
| |
|
|||| ||| ||| |||||||| |||| | | ||| || || || ||||| |||||||||||||||||||| | | |||| |||||||||| |||||| |
|
|
| T |
19838165 |
caacttcaaataacaagtttttatttttatgaatgtagcatttagtactcattatagcatcaaagattccaactttcctccaaacagattcatactttgg |
19838066 |
T |
 |
| Q |
207 |
tttaagctgatcaacccaacaaacccatttgtcttgtgggtggcgccacccagtgaaatgaaacttcaaaggcgactcctttggatgaaagacacgagac |
306 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| ||| | | | |||| ||| ||||||| |||||| | || ||||| | ||| ||| ||| |
|
|
| T |
19838065 |
tttaagcttatcaacccaacaaacccatttgtgttggtgatagtgccagccatagaaatgagttaacaaaggacaatcatttggctcaaaaacagaagaa |
19837966 |
T |
 |
| Q |
307 |
attgatg---atggattaaaaccaaaaggtgattcatgaatgtaatttgaaatgggttttaaaaaatgggcagttctgagagttgcttcagtgtcaccac |
403 |
Q |
| |
|
|||| |||| |||||| |||||||| ||| | |||| | |||| ||| ||||| | |||||||||||||||||| ||||||||| | | ||| |
|
|
| T |
19837965 |
gaagatgaaaatggcttaaaattaaaaggtggttcttcaatggagtttgcaataggtttaagaaaatgggcagttctgagtgttgcttcact---atcac |
19837869 |
T |
 |
| Q |
404 |
cagcaggtgagagcatgaaatcttccctcacctccatcat |
443 |
Q |
| |
|
||||| |||| ||||||||||||||||||||||||||||| |
|
|
| T |
19837868 |
cagcaagtgaaagcatgaaatcttccctcacctccatcat |
19837829 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 10 - 236
Target Start/End: Original strand, 20036846 - 20037072
Alignment:
| Q |
10 |
acagggtaaccacccaaaaccataatatcctccaaagtgattgtagcttcagcaaatggaaacacaaatgtatttgtcttagaacaccatttctccgcaa |
109 |
Q |
| |
|
||||| ||||| || | |||||| |||||||||||| ||| ||| |||||| |||| | ||||||||||||||||||||| ||||||||||||||| ||| |
|
|
| T |
20036846 |
acaggataacctcctagaaccatgatatcctccaaaatgactgttgcttcaccaaaggaaaacacaaatgtatttgtcttggaacaccatttctccacaa |
20036945 |
T |
 |
| Q |
110 |
cctcatatagcaagttttgatttctcagtatgcgacacttggtgctcataatagcatcaaagattccaacctgcttccacacagattcatgctttggttt |
209 |
Q |
| |
|
|| |||||||||||||||||| | | ||||| |||||| ||| |||||||||||||||||||||||| | ||||||||||||||||| ||| |||| |
|
|
| T |
20036946 |
ccccatatagcaagttttgatctttatgtatgtaacacttagtggccataatagcatcaaagattccaactttcttccacacagattcatagttttgttt |
20037045 |
T |
 |
| Q |
210 |
aagctgatcaacccaacaaacccattt |
236 |
Q |
| |
|
||| | || ||||||| |||||||||| |
|
|
| T |
20037046 |
aagtttatgaacccaagaaacccattt |
20037072 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 7 - 441
Target Start/End: Complemental strand, 19818438 - 19818004
Alignment:
| Q |
7 |
atgacagggtaaccacccaaaaccataatatcctccaaagtgattgtagcttcagcaaatggaaacacaaatgtatttgtcttagaacaccatttctccg |
106 |
Q |
| |
|
|||| ||| ||||| |||||||| || | ||||||||||||||| || || ||| |||||||||| ||||| || || |||| | ||||||||||||| |
|
|
| T |
19818438 |
atgataggataaccccccaaaactatgacatcctccaaagtgatagttgcctcaccaaatggaaaaacaaaggtgttagtctcacaacaccatttctcaa |
19818339 |
T |
 |
| Q |
107 |
caacctcatatagcaagttttgatttctcagtatgcgacacttggtgctcataatagcatcaaagattccaacctgcttccacacagattcatgctttgg |
206 |
Q |
| |
|
||||| || ||||||||||||||||| | | ||| || || || |||||||||||||||||||||| | | | ||||||||||||||||| |||||| |
|
|
| T |
19818338 |
caaccccaaatagcaagttttgatttttatgaatgtagcatttagtactcataatagcatcaaagattctagctttcttccacacagattcatactttgg |
19818239 |
T |
 |
| Q |
207 |
tttaagctgatcaacccaacaaacccatttgtcttgtgggtggcgccacccagtgaaatgaaacttcaaaggcgactcctttggatgaaagacacgagac |
306 |
Q |
| |
|
|||||| | ||||||||||| || |||||| |||||| | |||||||| ||| ||||||| | |||||||| |||| ||||||| ||| ||| || |
|
|
| T |
19818238 |
tttaagttcatcaacccaactaaaccatttctcttgttgttggcgccatccattgaaatgtattttcaaaggacactcatttggatcaaaaacagatgaa |
19818139 |
T |
 |
| Q |
307 |
attgatg---atggattaaaaccaaaaggtgattcatgaatgtaatttgaaatgggttttaaaaaatgggcagttctgagagttgcttcagtgtcaccac |
403 |
Q |
| |
|
||||| ||||||||| ||||||||| ||||| |||| | |||| || || || | |||||| ||||||||||| |||| ||| ||| ||| |
|
|
| T |
19818138 |
gatgatgaaaatggattaagctcaaaaggtggttcatcaatggagtttgcaacaggcttgagaaaatgagcagttctgagtgttggatcactgt---cac |
19818042 |
T |
 |
| Q |
404 |
cagcaggtgagagcatgaaatcttccctcacctccatc |
441 |
Q |
| |
|
|||||||||| |||||||||||||| || ||||||||| |
|
|
| T |
19818041 |
cagcaggtgaaagcatgaaatcttctctaacctccatc |
19818004 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 7 - 263
Target Start/End: Complemental strand, 19955956 - 19955700
Alignment:
| Q |
7 |
atgacagggtaaccacccaaaaccataatatcctccaaagtgattgtagcttcagcaaatggaaacacaaatgtatttgtcttagaacaccatttctccg |
106 |
Q |
| |
|
|||||||||||||| ||||||||||| | ||| |||||||||||||| || ||| ||||||||||||||||||||||||||| | ||||||||||||| |
|
|
| T |
19955956 |
atgacagggtaaccccccaaaaccatgacatcttccaaagtgattgttgcctcaccaaatggaaacacaaatgtatttgtctcacaacaccatttctcaa |
19955857 |
T |
 |
| Q |
107 |
caacctcatatagcaagttttgatttctcagtatgcgacacttggtgctcataatagcatcaaagattccaacctgcttccacacagattcatgctttgg |
206 |
Q |
| |
|
|||| || |||||||||||| |||| | | ||| || || || ||||| |||||||||||||||||||| | | |||| |||||||||| |||| | |
|
|
| T |
19955856 |
caactccaaatagcaagtttttatttttatgaatgtagcatttagtactcattatagcatcaaagattccaactttcctccaaacagattcatacttttg |
19955757 |
T |
 |
| Q |
207 |
tttaagctgatcaacccaacaaacccatttgtcttgtgggtggcgccacccagtgaa |
263 |
Q |
| |
|
|||||| | || ||||||| |||||||||| | ||||| | ||||||| |||||||| |
|
|
| T |
19955756 |
tttaagtttatgaacccaagaaacccatttcttttgtgtgaggcgccagccagtgaa |
19955700 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 10 - 236
Target Start/End: Complemental strand, 19951002 - 19950776
Alignment:
| Q |
10 |
acagggtaaccacccaaaaccataatatcctccaaagtgattgtagcttcagcaaatggaaacacaaatgtatttgtcttagaacaccatttctccgcaa |
109 |
Q |
| |
|
||||||||||| ||||||||||||| ||||||||||||||| || || ||| |||||||||||||||||||||| |||| || |||||||||||| ||| |
|
|
| T |
19951002 |
acagggtaaccccccaaaaccataacatcctccaaagtgatagttgcctcaccaaatggaaacacaaatgtattggtctcagtacaccatttctcaacaa |
19950903 |
T |
 |
| Q |
110 |
cctcatatagcaagttttgatttctcagtatgcgacacttggtgctcataatagcatcaaagattccaacctgcttccacacagattcatgctttggttt |
209 |
Q |
| |
|
|| || | |||||||| |||||| | |||| | || || |||||||||||||||||||||||| | | ||||||||||||||||| ||||||||| |
|
|
| T |
19950902 |
ccccaaaaagcaagttatgatttttatgtattatgcttttagtactcataatagcatcaaagattccagctttcttccacacagattcatactttggttt |
19950803 |
T |
 |
| Q |
210 |
aagctgatcaacccaacaaacccattt |
236 |
Q |
| |
|
|||||| |||| |||||| ||||||| |
|
|
| T |
19950802 |
aagctgctcaaaccaacattcccattt |
19950776 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 12 - 236
Target Start/End: Complemental strand, 19989398 - 19989174
Alignment:
| Q |
12 |
agggtaaccacccaaaaccataatatcctccaaagtgattgtagcttcagcaaatggaaacacaaatgtatttgtcttagaacaccatttctccgcaacc |
111 |
Q |
| |
|
||||||||| || |||||||||| ||| ||||||||||| || || ||| |||||||||| |||||||| ||||||| | ||||||||||||| ||||| |
|
|
| T |
19989398 |
agggtaaccccctaaaaccataacatcttccaaagtgatagttgcctcaccaaatggaaaaacaaatgtgtttgtctcacaacaccatttctcaacaacc |
19989299 |
T |
 |
| Q |
112 |
tcatatagcaagttttgatttctcagtatgcgacacttggtgctcataatagcatcaaagattccaacctgcttccacacagattcatgctttggtttaa |
211 |
Q |
| |
|
|| |||||||||| |||| | || ||||| ||||||||| ||||||||||| |||||||| ||||| | |||||||||| ||||| || ||||||| |
|
|
| T |
19989298 |
ccaaatagcaagttatgatctttctttatgcaacacttggtactcataatagcttcaaagatgccaactttcttccacacatattcaaatttgggtttaa |
19989199 |
T |
 |
| Q |
212 |
gctgatcaacccaacaaacccattt |
236 |
Q |
| |
|
| |||||||||||| |||||||||| |
|
|
| T |
19989198 |
gttgatcaacccaataaacccattt |
19989174 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 263
Target Start/End: Complemental strand, 20046010 - 20045748
Alignment:
| Q |
1 |
tcgccgatgacagggtaaccacccaaaaccataatatcctccaaagtgattgtagcttcagcaaatggaaacacaaatgtatttgtcttagaacaccatt |
100 |
Q |
| |
|
||||| |||| ||||||||| |||||||| || ||||||||||| || ||||| | ||| |||| ||||| | |||||||||||| | | ||||||||| |
|
|
| T |
20046010 |
tcgccaatgatagggtaacctcccaaaacaatgatatcctccaaggttattgttgtctcaccaaagggaaaaataaatgtatttgtatcacaacaccatt |
20045911 |
T |
 |
| Q |
101 |
tctccgcaacctcatatagcaagttttgatttctcagtatgcgacacttggtgctcataatagcatcaaagattccaacctgcttccacacagattcatg |
200 |
Q |
| |
|
||||| ||||| | | ||| ||||| |||||| | || |||| |||||| | | |||||||||| |||||||||||||| | ||||||||| |||||| |
|
|
| T |
20045910 |
tctccacaaccccttgtagtaagttctgatttttaagaatgcaacactttgagttcataatagcttcaaagattccaacttccttccacaccgattcaaa |
20045811 |
T |
 |
| Q |
201 |
ctttggtttaagctgatcaacccaacaaacccatttgtcttgtgggtggcgccacccagtgaa |
263 |
Q |
| |
|
|||||||| || | ||||| ||||| ||||||||| | ||| |||||||||||||||||||| |
|
|
| T |
20045810 |
ttttggtttgagtttatcaagccaactaacccatttttgttgagggtggcgccacccagtgaa |
20045748 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 16 - 402
Target Start/End: Complemental strand, 26646882 - 26646496
Alignment:
| Q |
16 |
taaccacccaaaaccataatatcctccaaagtgattgtagcttcagcaaatggaaacacaaatgtatttgtcttagaacaccatttctccgcaacctcat |
115 |
Q |
| |
|
||||| ||||||||||| |||||||||||||| || || |||||| |||| | || |||||| |||||||||| | ||||||||||||| | ||| ||| |
|
|
| T |
26646882 |
taaccccccaaaaccatgatatcctccaaagtaatagttgcttcaccaaaggcaatcacaaaggtatttgtctcacaacaccatttctcaactaccccat |
26646783 |
T |
 |
| Q |
116 |
atagcaagttttgatttctcagtatgcgacacttggtgctcataatagcatcaaagattccaacctgcttccacacagattcatgctttggtttaagctg |
215 |
Q |
| |
|
||||||||| |||||| | ||||||| ||| | |||| ||| || || |||||||| ||||| | ||||||||| | ||||| || ||||||| || |
|
|
| T |
26646782 |
atagcaagtcatgatttttatgtatgcggcaccttgtgcccattattgcttcaaagatgccaactttcttccacactgtttcatatttgagtttaagttg |
26646683 |
T |
 |
| Q |
216 |
atcaacccaacaaacccatttgtcttgtgggtggcgccacccagtgaaatgaaacttcaaaggcgactcctttggatgaaagacacgagacattgatgat |
315 |
Q |
| |
|
||||||||| | |||||||||| | ||||| | ||||| |||||||| | | ||||||||| |||||||||| | ||| ||| |||| ||||||| |
|
|
| T |
26646682 |
atcaacccatctaacccatttggcgcgtgggcgacgccaaccagtgaagttgattttcaaaggccactcctttggttcaaaaacagaagacggtgatgat |
26646583 |
T |
 |
| Q |
316 |
ggattaaaaccaaaaggtgattcatgaatgtaatttgaaatgggttttaaaaaatgggcagttctgagagttgcttcagtgtcacca |
402 |
Q |
| |
|
| ||||| |||||| || |||||||||| |||| ||| ||||| | ||||||||| |||||||||||| | || |||||||| |
|
|
| T |
26646582 |
tgtttaaactcaaaagctggttcatgaatggtgtttgcaattggtttcagaaaatgggcgattctgagagttggtgcactgtcacca |
26646496 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 7 - 188
Target Start/End: Complemental strand, 19853393 - 19853212
Alignment:
| Q |
7 |
atgacagggtaaccacccaaaaccataatatcctccaaagtgattgtagcttcagcaaatggaaacacaaatgtatttgtcttagaacaccatttctccg |
106 |
Q |
| |
|
|||| ||||||||| ||||||||||||| |||||||||||| ||||| |||||| ||||||| |||||||||||||| |||| |||||||||||| || |
|
|
| T |
19853393 |
atgatagggtaaccccccaaaaccataacatcctccaaagttattgttgcttcaccaaatgggaacacaaatgtattggtctcagaacaccatttgtcaa |
19853294 |
T |
 |
| Q |
107 |
caacctcatatagcaagttttgatttctcagtatgcgacacttggtgctcataatagcatcaaagattccaacctgcttcca |
188 |
Q |
| |
|
||||| || ||| ||||||||||| | || ||||| | ||| || |||||||||||||||||||||||||| | |||||| |
|
|
| T |
19853293 |
caaccccacataacaagttttgatctttctttatgcagctcttagtactcataatagcatcaaagattccaactttcttcca |
19853212 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 10 - 236
Target Start/End: Complemental strand, 19848865 - 19848639
Alignment:
| Q |
10 |
acagggtaaccacccaaaaccataatatcctccaaagtgattgtagcttcagcaaatggaaacacaaatgtatttgtcttagaacaccatttctccgcaa |
109 |
Q |
| |
|
||||| ||||| || | |||||| |||||||||||||||||||| |||||| |||| | ||||||||| |||||||| |||| |||||||||||| | | |
|
|
| T |
19848865 |
acaggataaccccctagaaccatgatatcctccaaagtgattgttgcttcaccaaaggaaaacacaaaggtatttgtattaggacaccatttctcaacta |
19848766 |
T |
 |
| Q |
110 |
cctcatatagcaagttttgatttctcagtatgcgacacttggtgctcataatagcatcaaagattccaacctgcttccacacagattcatgctttggttt |
209 |
Q |
| |
|
|| || |||||||||||||||| | || | ||||| ||| |||||||||||||||||||||||| | ||||||||||||||||| ||| |||| |
|
|
| T |
19848765 |
ccccaactagcaagttttgatttttatttaagtagcacttagtggccataatagcatcaaagattccaactttcttccacacagattcatagttttgttt |
19848666 |
T |
 |
| Q |
210 |
aagctgatcaacccaacaaacccattt |
236 |
Q |
| |
|
||| | || ||||||| |||||||||| |
|
|
| T |
19848665 |
aagtttatgaacccaagaaacccattt |
19848639 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 224
Target Start/End: Complemental strand, 19857944 - 19857734
Alignment:
| Q |
15 |
gtaaccacccaaaaccataatatcctccaaagtgattgtagcttcagcaaatggaaacacaaatgtatttg-tcttagaacaccatttctccgcaacctc |
113 |
Q |
| |
|
|||||| |||||||||| || |||||| | ||| ||||| |||||| |||| |||||||| |||||||| | ||| |||||||||||| || ||||| | |
|
|
| T |
19857944 |
gtaaccccccaaaaccacaacatcctctatagtaattgttgcttcaccaaagggaaacacgaatgtattgggtctcagaacaccatttgtcaacaacccc |
19857845 |
T |
 |
| Q |
114 |
atatagcaagttttgatttctcagtatgcgacacttggtgctcataatagcatcaaagattccaacctgcttccacacagattcatgctttggtttaagc |
213 |
Q |
| |
|
||| | ||||||| ||| | ||| |||||| || || || ||| ||||||||||||| ||| || | | ||||||||||||||||| ||||||| ||| |
|
|
| T |
19857844 |
ataaaccaagtttggatctttcattatgcggcatttagtactcctaatagcatcaaaaatttcagctttcttccacacagattcatattttggttgaagt |
19857745 |
T |
 |
| Q |
214 |
tgatcaaccca |
224 |
Q |
| |
|
|| |||||||| |
|
|
| T |
19857744 |
tggtcaaccca |
19857734 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 20005225 - 20005319
Alignment:
| Q |
10 |
acagggtaaccacccaaaaccataatatcctccaaagtgattgtagcttcagcaaatggaaacacaaatgtatttgtcttagaacaccatttctc |
104 |
Q |
| |
|
||||| ||||| |||||||| || | ||| |||||||||||||| |||||| ||||| |||||||||| || ||||| | | ||||||||||||| |
|
|
| T |
20005225 |
acaggataaccccccaaaacaatgacatcttccaaagtgattgttgcttcaccaaatagaaacacaaaggtgtttgtttcacaacaccatttctc |
20005319 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 401 - 445
Target Start/End: Complemental strand, 19848483 - 19848439
Alignment:
| Q |
401 |
caccagcaggtgagagcatgaaatcttccctcacctccatcatag |
445 |
Q |
| |
|
||||||| ||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
19848483 |
caccagctggtgaaagcatgaaatcttccctcacctccatcatag |
19848439 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 443
Target Start/End: Complemental strand, 19955608 - 19955517
Alignment:
| Q |
349 |
tttgaaatgggttttaaaaaatgggcagttctgagagttgcttcagtgtcaccaccagcaggtgagagcatgaaatcttccctcacctccatcat |
443 |
Q |
| |
|
|||||||||||||| | ||||||||| |||||||| |||| ||| | | ||||||| ||||| |||||||| |||||||||||||||||||| |
|
|
| T |
19955608 |
tttgaaatgggtttaagaaaatgggctgttctgagtgttggatcact---atcaccagctggtgaaagcatgaactcttccctcacctccatcat |
19955517 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 313 - 442
Target Start/End: Complemental strand, 19989103 - 19988977
Alignment:
| Q |
313 |
gatggattaaaaccaaaaggtgattcatgaatgtaatttgaaatgggttttaaaaaatgggcagttctgagagttgcttcagtgtcaccaccagcaggtg |
412 |
Q |
| |
|
||||||||||| ||| |||||| ||| | |||| |||||||||||||| | ||||||||| |||||||| ||| |||| ||| ||||||| |||| |
|
|
| T |
19989103 |
gatggattaaacccagaaggtggttcttcaatggtgtttgaaatgggtttgagaaaatgggcgattctgagaattggttcactgt---caccagctggtg |
19989007 |
T |
 |
| Q |
413 |
agagcatgaaatcttccctcacctccatca |
442 |
Q |
| |
|
| |||||| ||||||| |||||||||||| |
|
|
| T |
19989006 |
aaagcatgtgatcttccttcacctccatca |
19988977 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 19943585 - 19943503
Alignment:
| Q |
22 |
cccaaaaccataatatcctccaaagtgattgtagcttcagcaaatggaaacacaaatgtatttgtcttagaacaccatttctc |
104 |
Q |
| |
|
|||||||| || | ||| |||||||||||||| |||||| ||||| |||||||||| || ||||| | | ||||||||||||| |
|
|
| T |
19943585 |
cccaaaacaatgacatcttccaaagtgattgttgcttcaccaaatagaaacacaaaggtgtttgtttcacaacaccatttctc |
19943503 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 24840226 - 24840308
Alignment:
| Q |
22 |
cccaaaaccataatatcctccaaagtgattgtagcttcagcaaatggaaacacaaatgtatttgtcttagaacaccatttctc |
104 |
Q |
| |
|
|||||||| || | |||||||||||||||||| |||||| ||||| ||||||| || || ||||| | | ||||||||||||| |
|
|
| T |
24840226 |
cccaaaacaatgacatcctccaaagtgattgttgcttcaccaaatagaaacacgaaggtgtttgtttcacaacaccatttctc |
24840308 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 224
Target Start/End: Complemental strand, 26651899 - 26651697
Alignment:
| Q |
22 |
cccaaaaccataatatcctccaaagtgattgtagcttcagcaaatggaaacacaaatgtatttgtcttagaacaccatttctccgcaacctcatatagca |
121 |
Q |
| |
|
|||||||| || | |||||||||||||||||| || ||| |||| ||||| ||||| |||||||| | |||||||||||| | || | |||| | || |
|
|
| T |
26651899 |
cccaaaacaatgacatcctccaaagtgattgttgcctcaccaaaaggaaaaacaaagcaatttgtctcactacaccatttctcagaaatcccataaacca |
26651800 |
T |
 |
| Q |
122 |
agttttgatttctcagtatgcgacacttggtgctcataatagcatcaaagattccaacctgcttccacacagattcatgctttggtttaagctgatcaac |
221 |
Q |
| |
|
||| ||||||| ||| || ||| | ||| || ||||| |||| |||||||| || | | |||||||| ||||||| ||| || ||||| |||||||| |
|
|
| T |
26651799 |
agtcttgatttttcattacgcggctcttagtactcattataggttcaaagatgccggcttttttccacactgattcatacttgggcttaagttgatcaac |
26651700 |
T |
 |
| Q |
222 |
cca |
224 |
Q |
| |
|
||| |
|
|
| T |
26651699 |
cca |
26651697 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 190; Significance: 1e-103; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 4 - 442
Target Start/End: Complemental strand, 9814921 - 9814483
Alignment:
| Q |
4 |
ccgatgacagggtaaccacccaaaaccataatatcctccaaagtgattgtagcttcagcaaatggaaacacaaatgtatttgtcttagaacaccatttct |
103 |
Q |
| |
|
||||||||||| ||||| ||||||||||||| |||||||||| | || || || ||| |||| ||||||||||||||||| |||||| |||||||||||| |
|
|
| T |
9814921 |
ccgatgacaggataaccccccaaaaccataacatcctccaaactaatcgtcgcctcaccaaacggaaacacaaatgtattcgtcttacaacaccatttct |
9814822 |
T |
 |
| Q |
104 |
ccgcaacctcatatagcaagttttgatttctcagtatgcgacacttggtgctcataatagcatcaaagattccaacctgcttccacacagattcatgctt |
203 |
Q |
| |
|
| ||||| |||||||||||||||||| | ||| |||||| |||||||| ||||| |||||||||||||| || || | |||||||| |||||||| ||| |
|
|
| T |
9814821 |
caacaaccccatatagcaagttttgatctttcattatgcggcacttggtactcattatagcatcaaagatacctactttcttccacaaagattcatactt |
9814722 |
T |
 |
| Q |
204 |
tggtttaagctgatcaacccaacaaacccatttgtcttgtgggtggcgccacccagtgaaatgaaacttcaaaggcgactcctttggatgaaagacacga |
303 |
Q |
| |
|
||||||||| |||||||||||| ||| |||||| |||||||||| ||||| ||| ||||||| || ||||||||| |||| ||||||| ||| ||| | |
|
|
| T |
9814721 |
tggtttaagttgatcaacccaataaatccatttctcttgtgggtaacgccatccattgaaatggaatttcaaaggccactcatttggatcaaacacataa |
9814622 |
T |
 |
| Q |
304 |
gacattgatgatggattaaaaccaaaaggtgat---tcatgaatgtaatttgaaatgggttttaaaaaatgggcagttctgagagttgcttcagtgtcac |
400 |
Q |
| |
|
|||| ||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||| |||||| || |||| |||||||||||| ||| || |
|
|
| T |
9814621 |
gacaatgatgatgggttaaaaccaaaaggtgatggttcatgaatggaatttgaaatgggttttagaaaatgagccattctaagagttgcttcactgtgac |
9814522 |
T |
 |
| Q |
401 |
caccagcaggtgagagcatgaaatcttccctcacctccatca |
442 |
Q |
| |
|
|| | ||||||| |||||||||||||||||||||||||| |
|
|
| T |
9814521 |
ca---gttggtgagatcatgaaatcttccctcacctccatca |
9814483 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 7 - 440
Target Start/End: Original strand, 26355164 - 26355594
Alignment:
| Q |
7 |
atgacagggtaaccacccaaaaccataatatcctccaaagtgattgtagcttcagcaaatggaaacacaaatgtatttgtcttagaacaccatttctccg |
106 |
Q |
| |
|
|||||||||||||| || | |||||||| |||||||||| | || || ||| |||| ||||||||||||||||| |||| | |||||||||||||| |
|
|
| T |
26355164 |
atgacagggtaacccccaagaaccataacatcctccaaacctaccgtcgcctcaccaaacggaaacacaaatgtattagtctcacaacaccatttctcca |
26355263 |
T |
 |
| Q |
107 |
caacctcatatagcaagttttgatttctcagtatgcgacacttggtgctcataatagcatcaaagattccaacctgcttccacacagattcatgctttgg |
206 |
Q |
| |
|
||||| | || ||||||||||||||| |||||||||| || ||||| ||||| ||||||||||| || ||| | | |||||| || | ||||| || | |
|
|
| T |
26355264 |
caaccccgtaaagcaagttttgatttttcagtatgcggcatttggtactcattatagcatcaaaaatcccagctttcttccaaaccggttcatatttgag |
26355363 |
T |
 |
| Q |
207 |
tttaagctgatcaacccaacaaacccatttgtcttgtgggtggcgccacccagtgaaatgaaacttcaaaggcgactcctttggatgaaagacacgagac |
306 |
Q |
| |
|
||||| ||||||||||||||| ||||||| |||| || ||||| ||| |||| | | | |||||| |||| ||||| | ||| || |||| |
|
|
| T |
26355364 |
cttaagttgatcaacccaacaaccccatttcggttgtttttgtcgccaaccaatgaacttgattgttaaaggccactcttttgggtcaaacacgtaagac |
26355463 |
T |
 |
| Q |
307 |
attgatgatggattaaaaccaaaaggtgattcatgaatgtaatttgaaatgggttttaaaaaatgggcagttctgagagttgcttcagtgtcaccaccag |
406 |
Q |
| |
|
||||||||||| ||||| ||||||||| |||||||||| |||||||||||||||||| ||||||||| |||||| |||||||||| ||| |||| |
|
|
| T |
26355464 |
attgatgatgggttaaagccaaaaggttgttcatgaatggaatttgaaatgggttttagaaaatgggctattctgaaagttgcttcactgt---gaccat |
26355560 |
T |
 |
| Q |
407 |
caggtgagagcatgaaatcttccctcacctccat |
440 |
Q |
| |
|
| |||||||||||||||||||||||| ||||||| |
|
|
| T |
26355561 |
ctggtgagagcatgaaatcttccctctcctccat |
26355594 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 215 - 442
Target Start/End: Original strand, 2319479 - 2319706
Alignment:
| Q |
215 |
gatcaacccaacaaacccatttgtcttgtgggtggcgccacccagtgaaatgaaacttcaaaggcgactcctttggatgaaagacacgagacattgatga |
314 |
Q |
| |
|
||||||||||| ||| |||||| ||||||||||| ||||| ||| ||||||| || ||||||||| |||| ||||||| ||| ||| ||||| |||||| |
|
|
| T |
2319479 |
gatcaacccaataaatccatttctcttgtgggtgacgccatccattgaaatggaatttcaaaggccactcatttggatcaaacacataagacaatgatga |
2319578 |
T |
 |
| Q |
315 |
tggattaaaaccaaaaggtgat---tcatgaatgtaatttgaaatgggttttaaaaaatgggcagttctgagagttgcttcagtgtcaccaccagcaggt |
411 |
Q |
| |
|
||| ||||||||||||||| || |||| |||| |||||||||||||||||| |||||| || |||| |||||||||||| ||| |||| | ||| |
|
|
| T |
2319579 |
tgggttaaaaccaaaaggtcatggttcataaatggaatttgaaatgggttttagaaaatgagccattctaagagttgcttcactgtgacca---gttggt |
2319675 |
T |
 |
| Q |
412 |
gagagcatgaaatcttccctcacctccatca |
442 |
Q |
| |
|
|||| |||||||||||||||||||||||||| |
|
|
| T |
2319676 |
gagatcatgaaatcttccctcacctccatca |
2319706 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 38435383 - 38435465
Alignment:
| Q |
22 |
cccaaaaccataatatcctccaaagtgattgtagcttcagcaaatggaaacacaaatgtatttgtcttagaacaccatttctc |
104 |
Q |
| |
|
||||||||||| ||||| || ||||||||||| ||| || ||| |||||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
38435383 |
cccaaaaccatgatatcttcaaaagtgattgttgctacaccaagtggaaacacaaatgtattggtcttacaacaccatttctc |
38435465 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 215 - 440
Target Start/End: Original strand, 55864471 - 55864696
Alignment:
| Q |
215 |
gatcaacccaacaaacccatttgtcttgtgggtggcgccacccagtgaaatgaaacttcaaaggcgactcctttggatgaaagacacgagacattgatga |
314 |
Q |
| |
|
||||||||||| ||| |||||| ||||||||||| ||||| ||| ||||||| || ||||||||| |||| ||||||| ||| ||| ||||| |||||| |
|
|
| T |
55864471 |
gatcaacccaataaatccatttctcttgtgggtgacgccaaccattgaaatggaatttcaaaggccactcatttggatcaaacacataagacaatgatga |
55864570 |
T |
 |
| Q |
315 |
tggattaaaaccaaaaggtgat---tcatgaatgtaatttgaaatgggttttaaaaaatgggcagttctgagagttgcttcagtgtcaccaccagcaggt |
411 |
Q |
| |
|
||| |||||||||||||||||| ||||||||| |||||||||||||||||| |||||| | |||| |||||||||||| ||| |||| | ||| |
|
|
| T |
55864571 |
tgggttaaaaccaaaaggtgatggttcatgaatggaatttgaaatgggttttagaaaatgagtcattctaagagttgcttcactgtgacca---gttggt |
55864667 |
T |
 |
| Q |
412 |
gagagcatgaaatcttccctcacctccat |
440 |
Q |
| |
|
|||| |||||||||||||||||||||||| |
|
|
| T |
55864668 |
gagatcatgaaatcttccctcacctccat |
55864696 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 87; Significance: 2e-41; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 7 - 224
Target Start/End: Complemental strand, 1717095 - 1716875
Alignment:
| Q |
7 |
atgacagggtaaccacccaaaaccataatatcctccaaagtgattgtagcttcagcaaatggaaacacaaatgtatttgtcttagaacaccatttctccg |
106 |
Q |
| |
|
|||||||||||| | || ||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||| | |||||||||| || |
|
|
| T |
1717095 |
atgacagggtaatcccctaaaaccataatatcctccaaagtgattgtggcttcaccaaaaggaaacacaaatgtatttgtctcacaacaccatttttcaa |
1716996 |
T |
 |
| Q |
107 |
caacctcatatagcaagttttgatttctcagtat---gcgacacttggtgctcataatagcatcaaagattccaacctgcttccacacagattcatgctt |
203 |
Q |
| |
|
||| | |||||| ||||||||||||| || ||| ||||||||||||||||| ||||| |||||||| ||||| | ||||||||| | |||||| || |
|
|
| T |
1716995 |
caatcccatataacaagttttgatttttctttatacgacgacacttggtgctcattatagcttcaaagatgccaactttcttccacactgtttcatgttt |
1716896 |
T |
 |
| Q |
204 |
tggtttaagctgatcaaccca |
224 |
Q |
| |
|
||||||| | ||||||||| |
|
|
| T |
1716895 |
gagtttaagttcatcaaccca |
1716875 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 440
Target Start/End: Complemental strand, 1716752 - 1716671
Alignment:
| Q |
356 |
tgggttttaaaaaatgggcagttctgagagttgcttcagtgtcaccaccagcaggtgagagcatgaaatcttccctcacctccat |
440 |
Q |
| |
|
||||||| | ||||||||| ||||||| |||| |||| | |||| ||||| |||| |||||||||||||||||||||||||| |
|
|
| T |
1716752 |
tgggtttgagaaaatgggctgttctgaatgttggttcattctcacaaccag---gtgaaagcatgaaatcttccctcacctccat |
1716671 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 85; Significance: 3e-40; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 215 - 442
Target Start/End: Complemental strand, 47331788 - 47331558
Alignment:
| Q |
215 |
gatcaacccaacaaacccatttgtcttgtgggtggcgccacccagtgaaatgaaacttcaaaggcgactcctttggatgaaagacacgagacattgatga |
314 |
Q |
| |
|
||||||||||| ||| |||||| ||||||||||| ||||| ||| ||||||| || ||||||| | |||| ||||||| ||| ||| ||||| |||||| |
|
|
| T |
47331788 |
gatcaacccaataaatccatttctcttgtgggtgacgccatccattgaaatggaatttcaaagaccactcatttggatcaaacacataagacaatgatga |
47331689 |
T |
 |
| Q |
315 |
tggattaaaaccaaaaggtga------ttcatgaatgtaatttgaaatgggttttaaaaaatgggcagttctgagagttgcttcagtgtcaccaccagca |
408 |
Q |
| |
|
||| ||||||||||||||||| |||||||||| |||||||||||||||||| |||||| || |||| |||||||||||| ||| |||||| |
|
|
| T |
47331688 |
tgggttaaaaccaaaaggtgatgatggttcatgaatggaatttgaaatgggttttagaaaatgagccattctaagagttgcttcactgt---caccagtt |
47331592 |
T |
 |
| Q |
409 |
ggtgagagcatgaaatcttccctcacctccatca |
442 |
Q |
| |
|
||||||| |||||||||||||||||||| ||||| |
|
|
| T |
47331591 |
ggtgagatcatgaaatcttccctcaccttcatca |
47331558 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 215 - 442
Target Start/End: Original strand, 45887492 - 45887719
Alignment:
| Q |
215 |
gatcaacccaacaaacccatttgtcttgtgggtggcgccacccagtgaaatgaaacttcaaaggcgactcctttggatgaaagacacgagacattgatga |
314 |
Q |
| |
|
||||||||||| ||| ||||| ||||||||||| ||||| ||| ||||||| || ||||||||| |||| ||||||| ||| ||| ||||| |||||| |
|
|
| T |
45887492 |
gatcaacccaataaatacatttctcttgtgggtgacgccatccattgaaatggaatttcaaaggccactcatttggatcaaacacataagacaatgatga |
45887591 |
T |
 |
| Q |
315 |
tggattaaaaccaaaaggtgat---tcatgaatgtaatttgaaatgggttttaaaaaatgggcagttctgagagttgcttcagtgtcaccaccagcaggt |
411 |
Q |
| |
|
||| ||||||||||||||| || |||| |||| |||||||||||||||||| |||||| || |||| |||||||||||| ||| |||| | ||| |
|
|
| T |
45887592 |
tgggttaaaaccaaaaggtcatggttcataaatggaatttgaaatgggttttagaaaatgagccattctaagagttgcttcactgtgacca---gttggt |
45887688 |
T |
 |
| Q |
412 |
gagagcatgaaatcttccctcacctccatca |
442 |
Q |
| |
|
|||| |||||||||||||||||||||||||| |
|
|
| T |
45887689 |
gagatcatgaaatcttccctcacctccatca |
45887719 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 215 - 442
Target Start/End: Original strand, 48259459 - 48259686
Alignment:
| Q |
215 |
gatcaacccaacaaacccatttgtcttgtgggtggcgccacccagtgaaatgaaacttcaaaggcgactcctttggatgaaagacacgagacattgatga |
314 |
Q |
| |
|
||||||||||| ||| |||||| ||||||||||| ||||| ||| ||||||| || ||||||||| |||| ||||||| ||| ||| ||||| |||||| |
|
|
| T |
48259459 |
gatcaacccaataaatccatttctcttgtgggtgacgccatccattgaaatggaatttcaaaggccactcatttggatcaaacacataagacaatgatga |
48259558 |
T |
 |
| Q |
315 |
tggattaaaaccaaaaggtga---ttcatgaatgtaatttgaaatgggttttaaaaaatgggcagttctgagagttgcttcagtgtcaccaccagcaggt |
411 |
Q |
| |
|
||| ||||||||||||||||| |||||||||| ||||||||||| |||||| |||||| || |||| ||||||| |||| ||| ||| | ||| |
|
|
| T |
48259559 |
tgggttaaaaccaaaaggtgatggttcatgaatggaatttgaaatgagttttagaaaatgagccattctaagagttgtttcactgt---gaccggttggt |
48259655 |
T |
 |
| Q |
412 |
gagagcatgaaatcttccctcacctccatca |
442 |
Q |
| |
|
|||| |||||||||||||||||||| ||||| |
|
|
| T |
48259656 |
gagatcatgaaatcttccctcaccttcatca |
48259686 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 130
Target Start/End: Original strand, 22652328 - 22652448
Alignment:
| Q |
10 |
acagggtaaccacccaaaaccataatatcctccaaagtgattgtagcttcagcaaatggaaacacaaatgtatttgtcttagaacaccatttctccgcaa |
109 |
Q |
| |
|
||||||||||| | |||| ||||| ||| || || ||||| || || ||| |||||||||||||||||| ||||||| | | ||||||||||| ||| |
|
|
| T |
22652328 |
acagggtaaccctctaaaatcataacatcttctaaggtgatagttgcctcaccaaatggaaacacaaatgagtttgtctcacagcaccatttctcaacaa |
22652427 |
T |
 |
| Q |
110 |
cctcatatagcaagttttgat |
130 |
Q |
| |
|
|| || |||||||||| |||| |
|
|
| T |
22652428 |
ccccaaatagcaagttatgat |
22652448 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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