View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21347_low_26 (Length: 383)

Name: NF21347_low_26
Description: NF21347
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21347_low_26
NF21347_low_26
[»] chr7 (34 HSPs)
chr7 (133-368)||(48651484-48651719)
chr7 (22-134)||(7389387-7389499)
chr7 (22-132)||(35137533-35137643)
chr7 (27-133)||(36361908-36362014)
chr7 (22-134)||(8080373-8080485)
chr7 (19-133)||(3434561-3434675)
chr7 (22-132)||(4999504-4999614)
chr7 (27-133)||(36362025-36362131)
chr7 (22-132)||(38267040-38267150)
chr7 (22-136)||(38837213-38837327)
chr7 (22-135)||(40957704-40957817)
chr7 (22-132)||(19329842-19329952)
chr7 (22-129)||(3783998-3784105)
chr7 (29-132)||(21234401-21234504)
chr7 (55-134)||(19436210-19436289)
chr7 (22-131)||(32951483-32951592)
chr7 (28-134)||(36208171-36208277)
chr7 (22-133)||(46033791-46033902)
chr7 (22-129)||(3694370-3694477)
chr7 (59-109)||(8238236-8238286)
chr7 (67-133)||(22343360-22343426)
chr7 (66-135)||(10343597-10343666)
chr7 (67-132)||(32564461-32564526)
chr7 (83-135)||(11044185-11044237)
chr7 (28-136)||(18207176-18207283)
chr7 (62-134)||(38044195-38044267)
chr7 (64-132)||(46374834-46374902)
chr7 (67-133)||(41915740-41915806)
chr7 (14-127)||(35522881-35522994)
chr7 (28-136)||(35468851-35468959)
chr7 (76-132)||(31735884-31735940)
chr7 (64-132)||(39255955-39256023)
chr7 (28-132)||(40846109-40846213)
chr7 (30-98)||(27744307-27744375)
[»] chr8 (33 HSPs)
chr8 (22-132)||(15197333-15197443)
chr8 (22-132)||(12831047-12831157)
chr8 (22-132)||(34012286-34012396)
chr8 (28-136)||(5957826-5957934)
chr8 (22-134)||(14547920-14548032)
chr8 (22-132)||(504111-504221)
chr8 (55-133)||(37038478-37038556)
chr8 (28-135)||(10284627-10284734)
chr8 (22-132)||(23122587-23122697)
chr8 (22-132)||(40423933-40424043)
chr8 (22-132)||(1179930-1180040)
chr8 (50-133)||(44507105-44507188)
chr8 (28-110)||(8841428-8841510)
chr8 (27-132)||(15048177-15048281)
chr8 (28-134)||(15258925-15259031)
chr8 (62-127)||(10621117-10621182)
chr8 (67-136)||(16383373-16383442)
chr8 (22-134)||(4854853-4854965)
chr8 (64-132)||(20074966-20075034)
chr8 (67-134)||(34307214-34307281)
chr8 (22-132)||(43414571-43414681)
chr8 (73-136)||(24307625-24307688)
chr8 (73-134)||(24307834-24307895)
chr8 (67-132)||(30479509-30479574)
chr8 (50-132)||(14055610-14055692)
chr8 (28-133)||(17443824-17443929)
chr8 (28-132)||(38229429-38229532)
chr8 (63-134)||(42221513-42221584)
chr8 (93-131)||(9122196-9122234)
chr8 (22-88)||(9122229-9122295)
chr8 (67-133)||(32032724-32032789)
chr8 (64-106)||(42197369-42197410)
chr8 (67-136)||(16056436-16056505)
[»] chr1 (29 HSPs)
chr1 (22-136)||(8346378-8346492)
chr1 (22-132)||(9474866-9474976)
chr1 (22-136)||(38595150-38595264)
chr1 (22-135)||(2581912-2582025)
chr1 (14-129)||(44548358-44548473)
chr1 (22-132)||(3000319-3000429)
chr1 (55-133)||(51898706-51898784)
chr1 (22-133)||(41758804-41758915)
chr1 (22-132)||(27564725-27564835)
chr1 (22-132)||(47452310-47452420)
chr1 (27-132)||(48716277-48716382)
chr1 (22-134)||(38632311-38632423)
chr1 (22-133)||(50630457-50630568)
chr1 (22-132)||(43132-43242)
chr1 (22-135)||(32813244-32813357)
chr1 (55-132)||(37649198-37649275)
chr1 (27-102)||(13414791-13414866)
chr1 (22-135)||(23597081-23597194)
chr1 (27-110)||(45044555-45044638)
chr1 (59-131)||(11152405-11152476)
chr1 (19-134)||(26274430-26274545)
chr1 (67-132)||(50591035-50591100)
chr1 (67-136)||(5959035-5959104)
chr1 (62-134)||(49811557-49811629)
chr1 (64-133)||(37926470-37926539)
chr1 (67-132)||(41608528-41608593)
chr1 (67-127)||(44453984-44454044)
chr1 (19-102)||(26440764-26440847)
chr1 (38-107)||(44334176-44334245)
[»] chr2 (33 HSPs)
chr2 (14-133)||(7465717-7465836)
chr2 (22-134)||(9058478-9058590)
chr2 (28-136)||(33436096-33436204)
chr2 (22-129)||(28863458-28863565)
chr2 (27-133)||(5574483-5574589)
chr2 (22-134)||(10249372-10249484)
chr2 (22-129)||(19930810-19930917)
chr2 (22-132)||(13438343-13438453)
chr2 (22-132)||(17473020-17473130)
chr2 (22-132)||(40701478-40701588)
chr2 (22-134)||(30915461-30915573)
chr2 (22-133)||(32505638-32505749)
chr2 (22-132)||(28381645-28381755)
chr2 (50-135)||(38882832-38882916)
chr2 (28-132)||(17820000-17820104)
chr2 (28-136)||(20700811-20700919)
chr2 (28-132)||(27864704-27864808)
chr2 (22-136)||(38273132-38273246)
chr2 (22-132)||(40613892-40614002)
chr2 (22-136)||(42257189-42257303)
chr2 (55-132)||(4060685-4060762)
chr2 (28-135)||(26891500-26891607)
chr2 (64-133)||(33436210-33436279)
chr2 (28-131)||(41575138-41575242)
chr2 (67-132)||(43490121-43490186)
chr2 (62-133)||(2533123-2533193)
chr2 (67-110)||(2997522-2997565)
chr2 (22-133)||(36168835-36168946)
chr2 (28-126)||(3439985-3440083)
chr2 (67-136)||(45097770-45097839)
chr2 (63-134)||(17823782-17823853)
chr2 (67-132)||(38732354-38732419)
chr2 (67-136)||(13365347-13365418)
[»] chr6 (20 HSPs)
chr6 (22-136)||(15832573-15832687)
chr6 (22-132)||(32869678-32869788)
chr6 (22-129)||(22880648-22880755)
chr6 (22-133)||(11427615-11427728)
chr6 (22-132)||(17598554-17598664)
chr6 (22-135)||(6209455-6209568)
chr6 (22-136)||(23128117-23128231)
chr6 (55-132)||(29857827-29857904)
chr6 (56-132)||(31109424-31109500)
chr6 (22-133)||(31976247-31976358)
chr6 (27-136)||(31110756-31110863)
chr6 (67-135)||(30341395-30341463)
chr6 (67-134)||(15990077-15990144)
chr6 (67-132)||(15508059-15508124)
chr6 (64-136)||(12732478-12732550)
chr6 (28-132)||(31953026-31953130)
chr6 (27-128)||(28536483-28536582)
chr6 (56-136)||(946372-946452)
chr6 (28-127)||(9379708-9379807)
chr6 (64-110)||(4231570-4231616)
[»] chr5 (27 HSPs)
chr5 (22-136)||(18520874-18520988)
chr5 (22-132)||(33149628-33149738)
chr5 (22-134)||(36732932-36733044)
chr5 (22-133)||(2740273-2740384)
chr5 (22-133)||(6679697-6679808)
chr5 (22-132)||(14831814-14831924)
chr5 (22-132)||(40145407-40145517)
chr5 (29-137)||(13811647-13811755)
chr5 (22-132)||(28177775-28177885)
chr5 (22-132)||(35785199-35785309)
chr5 (27-132)||(42414297-42414402)
chr5 (28-132)||(35943888-35943992)
chr5 (73-136)||(36875644-36875707)
chr5 (27-132)||(33825319-33825424)
chr5 (67-135)||(3921300-3921368)
chr5 (22-134)||(15409600-15409712)
chr5 (50-133)||(41470434-41470517)
chr5 (67-133)||(2252203-2252269)
chr5 (55-137)||(31008983-31009065)
chr5 (27-132)||(26720516-26720621)
chr5 (27-132)||(26990265-26990370)
chr5 (73-134)||(39688938-39688999)
chr5 (28-88)||(21370048-21370108)
chr5 (73-127)||(10356639-10356694)
chr5 (64-110)||(16327923-16327969)
chr5 (62-135)||(38296200-38296273)
chr5 (32-132)||(20073516-20073616)
[»] chr3 (36 HSPs)
chr3 (22-136)||(49607410-49607524)
chr3 (22-132)||(53982011-53982121)
chr3 (22-133)||(17470404-17470515)
chr3 (28-134)||(33118847-33118953)
chr3 (22-132)||(33644200-33644310)
chr3 (29-134)||(27714888-27714993)
chr3 (27-134)||(11095350-11095455)
chr3 (22-134)||(54868885-54868997)
chr3 (22-127)||(52629305-52629410)
chr3 (22-136)||(31456685-31456799)
chr3 (28-132)||(8076393-8076497)
chr3 (22-132)||(26141522-26141632)
chr3 (19-128)||(48587078-48587187)
chr3 (55-135)||(36707447-36707527)
chr3 (28-133)||(24699950-24700055)
chr3 (28-128)||(30801729-30801829)
chr3 (30-133)||(9562998-9563101)
chr3 (28-127)||(26754700-26754799)
chr3 (22-136)||(11347912-11348026)
chr3 (28-133)||(35536625-35536730)
chr3 (22-134)||(41189754-41189866)
chr3 (64-133)||(8956761-8956830)
chr3 (67-132)||(14623874-14623939)
chr3 (22-134)||(11907369-11907481)
chr3 (64-131)||(13898087-13898154)
chr3 (22-132)||(20764905-20765015)
chr3 (22-132)||(51419350-51419460)
chr3 (67-132)||(45058588-45058652)
chr3 (28-132)||(41080709-41080811)
chr3 (67-127)||(42823116-42823176)
chr3 (67-110)||(36331364-36331407)
chr3 (64-134)||(35965806-35965876)
chr3 (22-132)||(47531865-47531975)
chr3 (28-134)||(1758452-1758560)
chr3 (73-133)||(36331419-36331479)
chr3 (62-106)||(52629951-52629994)
[»] chr4 (34 HSPs)
chr4 (22-134)||(48183039-48183151)
chr4 (28-136)||(50052424-50052532)
chr4 (22-136)||(480437-480551)
chr4 (27-132)||(11511457-11511562)
chr4 (28-132)||(3481654-3481758)
chr4 (22-134)||(24995097-24995209)
chr4 (22-132)||(6034044-6034154)
chr4 (22-132)||(41236347-41236457)
chr4 (22-136)||(42044357-42044471)
chr4 (28-135)||(29239883-29239990)
chr4 (55-132)||(50526194-50526271)
chr4 (22-133)||(29234235-29234346)
chr4 (22-132)||(54473523-54473633)
chr4 (22-134)||(23608233-23608345)
chr4 (22-132)||(31910192-31910302)
chr4 (67-138)||(19670751-19670822)
chr4 (67-134)||(32766956-32767023)
chr4 (65-132)||(40574779-40574846)
chr4 (67-134)||(55475189-55475256)
chr4 (28-134)||(29977883-29977989)
chr4 (67-133)||(44536781-44536846)
chr4 (64-134)||(47104542-47104612)
chr4 (67-133)||(50813927-50813993)
chr4 (14-94)||(41823920-41824000)
chr4 (67-110)||(17983778-17983821)
chr4 (67-134)||(29547994-29548061)
chr4 (67-133)||(47986207-47986273)
chr4 (22-127)||(53352556-53352660)
chr4 (67-132)||(55079749-55079814)
chr4 (28-100)||(18769141-18769213)
chr4 (31-133)||(28480267-28480369)
chr4 (31-133)||(28481142-28481244)
chr4 (31-133)||(28482017-28482119)
chr4 (67-132)||(8343198-8343263)
[»] scaffold0321 (1 HSPs)
scaffold0321 (22-136)||(10099-10213)
[»] scaffold1268 (1 HSPs)
scaffold1268 (28-132)||(925-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (28-132)||(925-1029)
[»] scaffold0237 (1 HSPs)
scaffold0237 (55-132)||(4029-4106)
[»] scaffold0110 (1 HSPs)
scaffold0110 (28-132)||(8859-8963)
[»] scaffold0018 (1 HSPs)
scaffold0018 (67-107)||(152523-152563)
[»] scaffold0316 (1 HSPs)
scaffold0316 (28-109)||(17077-17158)


Alignment Details
Target: chr7 (Bit Score: 224; Significance: 1e-123; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 133 - 368
Target Start/End: Original strand, 48651484 - 48651719
Alignment:
Q  133 ttttcacaaaattatgcaagtttgattcatttcctagtcaagccatttaagttttcttctttccaaattgttcgtatgttacatttcgtttgcattatta 232  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48651484 ttttcacaaaattatgcaagtttgattcatttcctagtcaagccatttaagttttcttctttccaaattgttcgtatgttacatttcgtttgcattatta 48651583  T
Q  233 taattgttttctttcaaagacatttcattaaataaatatgatgtcgttaaatccagaagaaaaaagaaaactagaatcatcttccttttgtcatattcaa 332  Q
    |||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48651584 taattgttttctttcaaagacatttcattaaaaaaatatgatgtcttgaaatccagaagaaaaaagaaaactagaatcatcttccttttgtcatattcaa 48651683  T
Q  333 aaagctcaaacccccctaaattttcaggcacaaaat 368  Q
    ||||||||||||||||||||||||||||||||||||    
T  48651684 aaagctcaaacccccctaaattttcaggcacaaaat 48651719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 7389499 - 7389387
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  |||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  |||||||||    
T  7389499 gagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatg 7389400  T
Q  122 tatcattactctt 134  Q
    |||||||||||||    
T  7389399 tatcattactctt 7389387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 35137643 - 35137533
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| ||||||||||  |||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||  ||||||||     
T  35137643 gagagaaaagagaaagtgtgtttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatt 35137544  T
Q  122 tatcattactc 132  Q
    |||||||||||    
T  35137543 tatcattactc 35137533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 27 - 133
Target Start/End: Original strand, 36361908 - 36362014
Alignment:
Q  27 aaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatca 126  Q
    |||||||||| |||| |||||  |||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  36361908 aaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagggtgtctatgtatca 36362007  T
Q  127 ttactct 133  Q
    |||||||    
T  36362008 ttactct 36362014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 8080373 - 8080485
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  |||| ||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||  |||||||||    
T  8080373 gagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtgtctatg 8080472  T
Q  122 tatcattactctt 134  Q
    |||||||||||||    
T  8080473 tatcattactctt 8080485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 133
Target Start/End: Complemental strand, 3434675 - 3434561
Alignment:
Q  19 gaagagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtct 118  Q
    ||||||| |||||||||| |||| |||||  || | |||||||||||||||||  |||||||||||||||||||||||||||||||||||||   |||||    
T  3434675 gaagagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagttttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtct 3434576  T
Q  119 atgtatcattactct 133  Q
    |||||||||||||||    
T  3434575 atgtatcattactct 3434561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 22 - 132
Target Start/End: Original strand, 4999504 - 4999614
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| ||||||||||  |||| ||||||||||||| ||| |||||||||||||||||||| |||||||||||| ||||  |||||||||    
T  4999504 gagataaaagagaaagtgtgtttgtgcggggtccacgtgactacgtatcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatg 4999603  T
Q  122 tatcattactc 132  Q
    |||||||||||    
T  4999604 tatcattactc 4999614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 27 - 133
Target Start/End: Complemental strand, 36362131 - 36362025
Alignment:
Q  27 aaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatca 126  Q
    |||||||||| |||| |||||  |||| ||||||||||||||||| |||||||||||||||||||||| |||||| ||||||||  ||||||||||||||    
T  36362131 aaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattaccacctaagggtgtctatgtatca 36362032  T
Q  127 ttactct 133  Q
    |||||||    
T  36362031 ttactct 36362025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 38267150 - 38267040
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  |||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||  |||||||||    
T  38267150 gagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacataagggtgtctatg 38267051  T
Q  122 tatcattactc 132  Q
    |||||||||||    
T  38267050 tatcattactc 38267040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 38837327 - 38837213
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  |||| ||||||||||||||||| |||||||||| |||||  ||||||||||||||||||||  |||||||||    
T  38837327 gagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtaggtgtacaagggtgtattgccacctaagggtgtctatg 38837228  T
Q  122 tatcattactctttt 136  Q
    |||||||||||||||    
T  38837227 tatcattactctttt 38837213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 40957817 - 40957704
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| ||||   || | ||||||||||||||||| |||||||||||||| |||||| |||||||||||||||| ||||||||||    
T  40957817 gagagaaaagagaaagtgtgcttgtacgggatccacgtgactacgtgtcagatttttgtgtgggtatcaaagagtgtattgccacctaagagtgtctatg 40957718  T
Q  122 tatcattactcttt 135  Q
    ||||||||||||||    
T  40957717 tatcattactcttt 40957704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 19329952 - 19329842
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  |||| ||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||   ||||||||    
T  19329952 gagagaaaagagaaagtgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatg 19329853  T
Q  122 tatcattactc 132  Q
    |||||||||||    
T  19329852 tatcattactc 19329842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 3784105 - 3783998
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  || | ||||||||||||||||| |||||||||||||||||||| | |||||||||||||||  |||||||||    
T  3784105 gagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatg 3784006  T
Q  122 tatcatta 129  Q
    ||||||||    
T  3784005 tatcatta 3783998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 21234504 - 21234401
Alignment:
Q  29 aagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcatt 128  Q
    ||||||||||||| |||||  ||||||| ||| |||||||||||||||||||||| |||||||||||||||||| |||||||   ||||||||||||||     
T  21234504 aagagaaaatgtgcttgtgcggggtacatgtggctacgtgtcaaatttttgtgtgagtgtcaaagggtgtattgtcacctaaggatgtctatgtatcata 21234405  T
Q  129 actc 132  Q
    ||||    
T  21234404 actc 21234401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 134
Target Start/End: Original strand, 19436210 - 19436289
Alignment:
Q  55 cacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactctt 134  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||   |||||||||||||||||||||    
T  19436210 cacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaaggatgtctatgtatcattactctt 19436289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 32951483 - 32951592
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  |||| ||||||||||||||| | |||||||||||| ||| ||||| ||||||| || |||| ||||||||||    
T  32951483 gagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtggatgttaaaggatgtattgtcatctaagagtgtctatg 32951582  T
Q  122 tatcattact 131  Q
    ||||||||||    
T  32951583 tatcattact 32951592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 28 - 134
Target Start/End: Complemental strand, 36208277 - 36208171
Alignment:
Q  28 aaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcat 127  Q
    |||||||||||||| ||||| ||||| |||||||| || |||||  |||||||||||||||||| |  |||||| ||||||||  |||||||||||||||    
T  36208277 aaagagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagctttttgtgtgggtgtcaatgaatgtattaccacctaagggtgtctatgtatcat 36208178  T
Q  128 tactctt 134  Q
     ||||||    
T  36208177 aactctt 36208171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 133
Target Start/End: Original strand, 46033791 - 46033902
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||||| || |||||  | || || ||||| |||||||| |||||| ||||||||| ||||||||||||||||||||| | | ||||||    
T  46033791 gagagaaaagagaaaatatgcttgtgcggagttcatgtgaccacgtgtcagatttttatgtgggtgttaaagggtgtattgccacctaagaatatctatg 46033890  T
Q  122 tatcattactct 133  Q
    |||||| |||||    
T  46033891 tatcataactct 46033902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 3694477 - 3694370
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  || | ||| ||||||||||||| |||||||||||||||| ||| ||||||||| |||||||  |||| |||     
T  3694477 gagagaaaagagaaagtgtgcttgtgcgggatccacatgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgtcacctaagggtgtgtata 3694378  T
Q  122 tatcatta 129  Q
    ||||||||    
T  3694377 tatcatta 3694370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 109
Target Start/End: Complemental strand, 8238286 - 8238236
Alignment:
Q  59 tgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccaccta 109  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  8238286 tgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 8238236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 22343426 - 22343360
Alignment:
Q  67 tgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactct 133  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||  |||| |||||||||| |||||    
T  22343426 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactct 22343360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 66 - 135
Target Start/End: Original strand, 10343597 - 10343666
Alignment:
Q  66 gtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactcttt 135  Q
    |||||| |||||||||||||||||||   ||||||| ||||||||  |||||||||||||||||||||||    
T  10343597 gtgtcagatttttgtgtgggtgtcaagatgtgtatttccacctaagggtgtctatgtatcattactcttt 10343666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 32564461 - 32564526
Alignment:
Q  67 tgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactc 132  Q
    ||||| ||||||||||||||||||| |||||||||||||||||| | ||| |||||||||| ||||    
T  32564461 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagaatgtttatgtatcataactc 32564526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 11044237 - 11044185
Alignment:
Q  83 gggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactcttt 135  Q
    |||||||||||| |||||||||||||||  |||||||||||||||||||||||    
T  11044237 gggtgtcaaaggatgtattgccacctaagggtgtctatgtatcattactcttt 11044185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 136
Target Start/End: Complemental strand, 18207283 - 18207176
Alignment:
Q  28 aaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcat 127  Q
    ||||||||| |||| |||||  |||| |||||| | |||||| | |||||||| ||||||||||  |||||||||||||||||   ||||||||||||||    
T  18207283 aaagagaaagtgtgcttgtgtggggttcacgtgcc-acgtgttagatttttgtatgggtgtcaagaggtgtattgccacctaaggttgtctatgtatcat 18207185  T
Q  128 tactctttt 136  Q
     ||||||||    
T  18207184 aactctttt 18207176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 62 - 134
Target Start/End: Complemental strand, 38044267 - 38044195
Alignment:
Q  62 ctacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactctt 134  Q
    |||| ||||| |||||||||||| |||||| ||||||||||||||||||  |||| |||||||||| ||||||    
T  38044267 ctacatgtcagatttttgtgtggatgtcaaggggtgtattgccacctaagggtgtttatgtatcataactctt 38044195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 46374834 - 46374902
Alignment:
Q  64 acgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactc 132  Q
    |||||||| |||||||||||||||| ||||||||| |||||||||||   |||||||||||||| ||||    
T  46374834 acgtgtcagatttttgtgtgggtgttaaagggtgtgttgccacctaaggatgtctatgtatcataactc 46374902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 41915806 - 41915740
Alignment:
Q  67 tgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactct 133  Q
    ||||| |||||||||| |||||||| ||||||||||||||||||  |||| |||||||||| |||||    
T  41915806 tgtcagatttttgtgtaggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactct 41915740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 127
Target Start/End: Complemental strand, 35522994 - 35522881
Alignment:
Q  14 gagatgaagagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaag 113  Q
    |||| ||||||| |||||||||| |||| |||||  || | ||  || | |||||||| |||||||||||||||| ||| ||||||||||||| |||       
T  35522994 gagaagaagagagaaaagagaaagtgtgcttgtgcgggatccatatggccacgtgtcagatttttgtgtgggtgttaaatggtgtattgccacttaagga 35522895  T
Q  114 tgtctatgtatcat 127  Q
    ||||||||||||||    
T  35522894 tgtctatgtatcat 35522881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 136
Target Start/End: Original strand, 35468851 - 35468959
Alignment:
Q  28 aaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcat 127  Q
    ||||||||| |||||||||| ||||| ||| ||   || | | | |||||| ||||||||||||| | |||||||||| ||||   ||||||||||||||    
T  35468851 aaagagaaagtgtgtttgtgcagggtccacatggtcacatattagatttttatgtgggtgtcaaatgatgtattgccatctaaggatgtctatgtatcat 35468950  T
Q  128 tactctttt 136  Q
    |||||||||    
T  35468951 tactctttt 35468959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 31735940 - 31735884
Alignment:
Q  76 tttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactc 132  Q
    ||||||||||||| |||| ||||||||||||||||   |||||||||||||| ||||    
T  31735940 tttgtgtgggtgttaaagagtgtattgccacctaaggatgtctatgtatcataactc 31735884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 39255955 - 39256023
Alignment:
Q  64 acgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactc 132  Q
    |||||||| |||||||| ||||| ||||  |||||||||||||||||   |||||||||||||| ||||    
T  39255955 acgtgtcagatttttgtatgggtatcaagtggtgtattgccacctaaggttgtctatgtatcataactc 39256023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 40846109 - 40846213
Alignment:
Q  28 aaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcat 127  Q
    ||||||||| ||| ||||||  |||| ||  | ||||| ||| | |||||||||||| |||||| ||||||||||||||||||   ||| ||||||||||    
T  40846109 aaagagaaagtgtatttgtgcggggtccatataactacatgttagatttttgtgtggatgtcaaggggtgtattgccacctaaggatgtttatgtatcat 40846208  T
Q  128 tactc 132  Q
     ||||    
T  40846209 aactc 40846213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 27744307 - 27744375
Alignment:
Q  30 agagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgt 98  Q
    |||||||||||| || ||| || | |||||| | || ||||| |||||||||||||| |||||||||||    
T  27744307 agagaaaatgtgcttatgagggatccacgtggccacatgtcagatttttgtgtgggtatcaaagggtgt 27744375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 8e-37; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 15197443 - 15197333
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15197443 gagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtgtctatg 15197344  T
Q  122 tatcattactc 132  Q
    |||||||||||    
T  15197343 tatcattactc 15197333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 12831157 - 12831047
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  |||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||  |||||||||    
T  12831157 gagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatg 12831058  T
Q  122 tatcattactc 132  Q
    |||||||||||    
T  12831057 tatcattactc 12831047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 22 - 132
Target Start/End: Original strand, 34012286 - 34012396
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  || | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||    
T  34012286 gagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatg 34012385  T
Q  122 tatcattactc 132  Q
    |||||||||||    
T  34012386 tatcattactc 34012396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 28 - 136
Target Start/End: Complemental strand, 5957934 - 5957826
Alignment:
Q  28 aaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcat 127  Q
    ||||||||| |||| |||||  || | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  5957934 aaagagaaagtgtgattgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagaatgtctatgtatcat 5957835  T
Q  128 tactctttt 136  Q
    |||| ||||    
T  5957834 tactttttt 5957826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 14548032 - 14547920
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  |||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||  |||||||||    
T  14548032 gagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagggtgtctatg 14547933  T
Q  122 tatcattactctt 134  Q
    |||| ||||||||    
T  14547932 tatctttactctt 14547920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 22 - 132
Target Start/End: Original strand, 504111 - 504221
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||  |||| |||||  |||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||  |||||||||    
T  504111 gagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatg 504210  T
Q  122 tatcattactc 132  Q
    |||||||||||    
T  504211 tatcattactc 504221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 55 - 133
Target Start/End: Complemental strand, 37038556 - 37038478
Alignment:
Q  55 cacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactct 133  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  37038556 cacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactct 37038478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 28 - 135
Target Start/End: Original strand, 10284627 - 10284734
Alignment:
Q  28 aaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcat 127  Q
    ||||||||| |||| |||||  |||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||  |||||||||||||||    
T  10284627 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagagtgtattgtcacttaagggtgtctatgtatcat 10284726  T
Q  128 tactcttt 135  Q
     |||||||    
T  10284727 aactcttt 10284734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 22 - 132
Target Start/End: Original strand, 23122587 - 23122697
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| || ||  |||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||  |||||||||    
T  23122587 gagagaaaagagaaagtgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacttaagggtgtctatg 23122686  T
Q  122 tatcattactc 132  Q
    |||||||||||    
T  23122687 tatcattactc 23122697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 22 - 132
Target Start/End: Original strand, 40423933 - 40424043
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  |||| ||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||  || ||||||    
T  40423933 gagagaaaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtatctatg 40424032  T
Q  122 tatcattactc 132  Q
    |||||||||||    
T  40424033 tatcattactc 40424043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 22 - 132
Target Start/End: Original strand, 1179930 - 1180040
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  |  | ||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||  |||||||||    
T  1179930 gagagaaaagagaaagtgtgcttgtgcggaatccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatg 1180029  T
Q  122 tatcattactc 132  Q
    |||||||||||    
T  1180030 tatcattactc 1180040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 50 - 133
Target Start/End: Original strand, 44507105 - 44507188
Alignment:
Q  50 gggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactct 133  Q
    |||| ||||||||||||||||| |||||||||||||||| |||| ||||||| ||||||||  |||||||||||||||||||||    
T  44507105 gggtccacgtgactacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaagggtgtctatgtatcattactct 44507188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 28 - 110
Target Start/End: Original strand, 8841428 - 8841510
Alignment:
Q  28 aaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaa 110  Q
    ||||||||| |||| |||||  |||| ||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||    
T  8841428 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaa 8841510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 15048177 - 15048281
Alignment:
Q  27 aaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatca 126  Q
    |||||||||| |||| |||||  |||| || ||| |||||||||| |||||||||||| |||||||||||||||||||||||||   |||||||||||||    
T  15048177 aaaagagaaagtgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgtgg-tgtcaaagggtgtattgccacctaaggatgtctatgtatca 15048275  T
Q  127 ttactc 132  Q
    | ||||    
T  15048276 taactc 15048281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 134
Target Start/End: Original strand, 15258925 - 15259031
Alignment:
Q  28 aaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcat 127  Q
    |||||||||||||| ||||| ||||| |||||||| || ||||| |||||| ||||| |||| | || |||||||||| |||| ||| ||||||||||||    
T  15258925 aaagagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagatttttatgtggatgtccagggatgtattgccatctaagagtatctatgtatcat 15259024  T
Q  128 tactctt 134  Q
     ||||||    
T  15259025 aactctt 15259031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 62 - 127
Target Start/End: Original strand, 10621117 - 10621182
Alignment:
Q  62 ctacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcat 127  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||||   ||||||||||||||    
T  10621117 ctacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcat 10621182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 67 - 136
Target Start/End: Complemental strand, 16383442 - 16383373
Alignment:
Q  67 tgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactctttt 136  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||  |||| |||||||||| ||||||||    
T  16383442 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactctttt 16383373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 4854853 - 4854965
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| ||||| ||||| || ||| | || | ||| |||||| ||| ||||| |||||||||||||||||||||   ||||||||    
T  4854853 gagagaaaagagaaagtgtgcttgtgcagggtccatgtggccacatatcagatttttatgtaggtgttaaagggtgtattgccacctaaggatgtctatg 4854952  T
Q  122 tatcattactctt 134  Q
    |||||||||||||    
T  4854953 tatcattactctt 4854965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 20074966 - 20075034
Alignment:
Q  64 acgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactc 132  Q
    |||||||| |||||| |||||||||||||| ||||||||||||||||   |||||||||||||||||||    
T  20074966 acgtgtcacatttttatgtgggtgtcaaagagtgtattgccacctaaggatgtctatgtatcattactc 20075034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 67 - 134
Target Start/End: Complemental strand, 34307281 - 34307214
Alignment:
Q  67 tgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactctt 134  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||  |||| |||||||||| ||||||    
T  34307281 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactctt 34307214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 132
Target Start/End: Original strand, 43414571 - 43414681
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  || | || ||||| |||||| | |||||||||||||||||||||||||| |||||| ||||   ||||||||    
T  43414571 gagagaaaagagaaagtgtgcttgtgcgggatccatgtgaccacgtgttagatttttgtgtgggtgtcaaagggtgtgttgccatctaaggatgtctatg 43414670  T
Q  122 tatcattactc 132  Q
    |||||| ||||    
T  43414671 tatcataactc 43414681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 136
Target Start/End: Complemental strand, 24307688 - 24307625
Alignment:
Q  73 atttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactctttt 136  Q
    ||||||||||||||||||| || |||||||||||||||  |||| |||||||||| ||||||||    
T  24307688 atttttgtgtgggtgtcaatggatgtattgccacctaagggtgtttatgtatcataactctttt 24307625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 134
Target Start/End: Original strand, 24307834 - 24307895
Alignment:
Q  73 atttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactctt 134  Q
    ||||||||||||||||||| || |||||||||||||||  |||| |||||||||| ||||||    
T  24307834 atttttgtgtgggtgtcaagggatgtattgccacctaagggtgtttatgtatcataactctt 24307895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 30479509 - 30479574
Alignment:
Q  67 tgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactc 132  Q
    ||||| |||||| ||||| |||||||||||||||||||||||||  |||| |||||||||| ||||    
T  30479509 tgtcagatttttatgtggatgtcaaagggtgtattgccacctaagggtgtttatgtatcataactc 30479574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 132
Target Start/End: Original strand, 14055610 - 14055692
Alignment:
Q  50 gggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactc 132  Q
    |||| ||||||||||| ||| | |||||||||||| |||||| | |||||||| |||||||  ||||| ||||||||| ||||    
T  14055610 gggtccacgtgactacatgtaagatttttgtgtggatgtcaaggagtgtattgtcacctaagggtgtcaatgtatcataactc 14055692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 133
Target Start/End: Complemental strand, 17443929 - 17443824
Alignment:
Q  28 aaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcat 127  Q
    ||||||||| ||| ||||||  |||| ||| ||||||| ||||| ||||||||||| |||| ||   |||||||| |||||||   ||||||||||||||    
T  17443929 aaagagaaagtgtctttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtatcat 17443830  T
Q  128 tactct 133  Q
     |||||    
T  17443829 aactct 17443824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 38229532 - 38229429
Alignment:
Q  28 aaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcat 127  Q
    |||||||||||||| ||||  ||  | |||||||| || ||||| ||||||||||||||||| | | | |||||||||||||| |||||  |||||||||    
T  38229532 aaagagaaaatgtgcttgtacagaatccacgtgaccacatgtcagatttttgtgtgggtgtc-aggagcgtattgccacctaagagtgttcatgtatcat 38229434  T
Q  128 tactc 132  Q
     ||||    
T  38229433 aactc 38229429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 63 - 134
Target Start/End: Complemental strand, 42221584 - 42221513
Alignment:
Q  63 tacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactctt 134  Q
    ||||||||| ||||||||||||||||| | |  ||||||| |||||||   ||| |||||||||||||||||    
T  42221584 tacgtgtcagatttttgtgtgggtgtccaggaatgtattgtcacctaaggatgtatatgtatcattactctt 42221513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 131
Target Start/End: Complemental strand, 9122234 - 9122196
Alignment:
Q  93 gggtgtattgccacctaaaagtgtctatgtatcattact 131  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  9122234 gggtgtattgccacctaagggtgtctatgtatcattact 9122196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 9122295 - 9122229
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgt 88  Q
    |||| |||||||||| |||| |||||  || | ||||||||||| ||||| ||||||||||||||||    
T  9122295 gagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtgt 9122229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 32032789 - 32032724
Alignment:
Q  67 tgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactct 133  Q
    ||||| |||||||||||| |||||| || |||||||||||||||  |||| |||||||||| |||||    
T  32032789 tgtcagatttttgtgtggatgtcaa-ggatgtattgccacctaagggtgtttatgtatcataactct 32032724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 42197410 - 42197369
Alignment:
Q  64 acgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccac 106  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  42197410 acgtgtcaaaattttgtgtgggtgt-aaagggtgtattgccac 42197369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 136
Target Start/End: Original strand, 16056436 - 16056505
Alignment:
Q  67 tgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactctttt 136  Q
    ||||| ||||||||||||||||||| || ||||||| ||| |||   ||| |||||||||| ||||||||    
T  16056436 tgtcagatttttgtgtgggtgtcaagggatgtattgtcacataaggatgtttatgtatcataactctttt 16056505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 8e-37; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 8346378 - 8346492
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| ||||| ||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  8346378 gagagaaaagagaaagtgtgcttgtgcagggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaaggtgactatg 8346477  T
Q  122 tatcattactctttt 136  Q
    |||||||||||||||    
T  8346478 tatcattactctttt 8346492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 22 - 132
Target Start/End: Original strand, 9474866 - 9474976
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| ||||||||||  |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||    
T  9474866 gagagaaaagagaaagtgtgtttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatg 9474965  T
Q  122 tatcattactc 132  Q
    |||||||||||    
T  9474966 tatcattactc 9474976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 38595264 - 38595150
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| ||||   |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  38595264 gagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaaggtgtttatg 38595165  T
Q  122 tatcattactctttt 136  Q
    |||||||||||||||    
T  38595164 tatcattactctttt 38595150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 2582025 - 2581912
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||| ||||| |||| |||||  |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||    
T  2582025 gagagaaaaaagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatg 2581926  T
Q  122 tatcattactcttt 135  Q
    ||||||||||||||    
T  2581925 tatcattactcttt 2581912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 14 - 129
Target Start/End: Original strand, 44548358 - 44548473
Alignment:
Q  14 gagatgaagagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaag 113  Q
    |||| ||||||| |||||||||| |||| |||||  |||| ||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||      
T  44548358 gagaagaagagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaatggtgtattgccacctaaaga 44548457  T
Q  114 tgtctatgtatcatta 129  Q
    ||||||||||||||||    
T  44548458 tgtctatgtatcatta 44548473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 3000429 - 3000319
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| ||||   |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||| ||||    
T  3000429 gagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatg 3000330  T
Q  122 tatcattactc 132  Q
    |||||||||||    
T  3000329 tatcattactc 3000319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 55 - 133
Target Start/End: Original strand, 51898706 - 51898784
Alignment:
Q  55 cacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactct 133  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  51898706 cacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactct 51898784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 22 - 133
Target Start/End: Complemental strand, 41758915 - 41758804
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| ||||||||||  |||| || |||||||||||||| |||||||||||| ||||||||||||||||||||  |||  |||||||||    
T  41758915 gagagaaaagagaaagtgtgtttgtgcggggtccatgtgactacgtgtcagatttttgtgtggttgtcaaagggtgtattgccatttaatggtgtctatg 41758816  T
Q  122 tatcattactct 133  Q
    ||||||||||||    
T  41758815 tatcattactct 41758804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 22 - 132
Target Start/End: Original strand, 27564725 - 27564835
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  |||| ||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||   ||||||||    
T  27564725 gagagaaaagagaaagtgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatg 27564824  T
Q  122 tatcattactc 132  Q
    |||||||||||    
T  27564825 tatcattactc 27564835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 22 - 132
Target Start/End: Original strand, 47452310 - 47452420
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  || | ||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||  |||||||||    
T  47452310 gagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatg 47452409  T
Q  122 tatcattactc 132  Q
    |||||||||||    
T  47452410 tatcattactc 47452420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 48716277 - 48716382
Alignment:
Q  27 aaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatca 126  Q
    |||||| ||| |||| |||||  |||| ||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||  ||||||||||||||    
T  48716277 aaaagataaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatca 48716376  T
Q  127 ttactc 132  Q
    ||||||    
T  48716377 ttactc 48716382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 38632311 - 38632423
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||| ||| |||| |||||  |||| ||||||||||||||||| |||||||||||| ||| ||| |||||||||||||||||  |||||||||    
T  38632311 gagagaaaagaaaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaaaggtgtattgccacctaagggtgtctatg 38632410  T
Q  122 tatcattactctt 134  Q
    |||||||||||||    
T  38632411 tatcattactctt 38632423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 22 - 133
Target Start/End: Complemental strand, 50630568 - 50630457
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  |||| ||||||||||||||||| ||||||||||||||  |||||| |||||||||||||||  || ||||||    
T  50630568 gagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtaacaaaggatgtattgccacctaagggtatctatg 50630469  T
Q  122 tatcattactct 133  Q
    ||||||||||||    
T  50630468 tatcattactct 50630457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 43242 - 43132
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  | || ||||||||||||||||| |||||||||||||||||||||| ||||||| | ||||| | ||||||||    
T  43242 gagagaaaagagaaagtgtgcttgtgcggagtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtctcctaagactgtctatg 43143  T
Q  122 tatcattactc 132  Q
    |||||||||||    
T  43142 tatcattactc 43132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 32813357 - 32813244
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  |||| || ||||| |||||||| |||||||||||||||| |||||||||||||||||||||   ||||||||    
T  32813357 gagagaaaagagaaagtgtgcttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatg 32813258  T
Q  122 tatcattactcttt 135  Q
    |||||| |||||||    
T  32813257 tatcataactcttt 32813244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 37649275 - 37649198
Alignment:
Q  55 cacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactc 132  Q
    |||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||    
T  37649275 cacgtgaccacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaagatgtctatgtatcattactc 37649198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 13414866 - 13414791
Alignment:
Q  27 aaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattg 102  Q
    ||||||||||||||| |||||  |||| ||||||||||||||| | ||||||||||||||||||||||||||||||    
T  13414866 aaaagagaaaatgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattg 13414791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 23597081 - 23597194
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||| ||| |||||||||| | |||  ||||| | |||||||| |||||| ||||||| |||||| ||||||||||||||||   ||||||||    
T  23597081 gagagaaaagataaagtgtgtttgtgcaaggtcaacgtggccacgtgtcagatttttatgtgggtatcaaagagtgtattgccacctaatgatgtctatg 23597180  T
Q  122 tatcattactcttt 135  Q
    ||||||||||||||    
T  23597181 tatcattactcttt 23597194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 110
Target Start/End: Original strand, 45044555 - 45044638
Alignment:
Q  27 aaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaa 110  Q
    |||||||||||||||||||||  |||| || ||| |||| ||||| |||||||| ||||||||||| |||||||||||||||||    
T  45044555 aaaagagaaaatgtgtttgtgcggggtccatgtggctacatgtcagatttttgtatgggtgtcaaatggtgtattgccacctaa 45044638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 59 - 131
Target Start/End: Original strand, 11152405 - 11152476
Alignment:
Q  59 tgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattact 131  Q
    ||||||||||||| |||||||||||| |||| |||||||||||||||||| || |||||||||| ||||||||    
T  11152405 tgactacgtgtcagatttttgtgtggatgtcgaagggtgtattgccacct-aaggtgtctatgtttcattact 11152476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 134
Target Start/End: Complemental strand, 26274545 - 26274430
Alignment:
Q  19 gaagagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtct 118  Q
    ||||||| |||||| ||| |||  ||||| ||| | |||||||||| |||||| |||||| ||||| ||||||| | ||||||||||| |||  ||||||    
T  26274545 gaagagagaaaagaaaaagtgtacttgtgcaggatccacgtgactatgtgtcagatttttctgtggatgtcaaatgatgtattgccacataagggtgtct 26274446  T
Q  119 atgtatcattactctt 134  Q
    ||||||||||| ||||    
T  26274445 atgtatcattattctt 26274430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 50591035 - 50591100
Alignment:
Q  67 tgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactc 132  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||  |||| |||||||||| ||||    
T  50591035 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 50591100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 136
Target Start/End: Original strand, 5959035 - 5959104
Alignment:
Q  67 tgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactctttt 136  Q
    ||||| |||||||||||||||||||  ||||||||||||| |||  |||| |||||||||| ||||||||    
T  5959035 tgtcagatttttgtgtgggtgtcaagaggtgtattgccacttaagggtgtttatgtatcataactctttt 5959104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 62 - 134
Target Start/End: Original strand, 49811557 - 49811629
Alignment:
Q  62 ctacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactctt 134  Q
    |||||||||| |||||||||||| ||||||| ||||||||| |||||||   ||||||| |||||| ||||||    
T  49811557 ctacgtgtcagatttttgtgtggatgtcaaatggtgtattgtcacctaaggatgtctatctatcataactctt 49811629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 64 - 133
Target Start/End: Original strand, 37926470 - 37926539
Alignment:
Q  64 acgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactct 133  Q
    |||||||| |||||| ||||||||| ||| | ||||||||||||||||  | |||||||||||| |||||    
T  37926470 acgtgtcagatttttatgtgggtgttaaaagatgtattgccacctaaagatatctatgtatcataactct 37926539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 41608528 - 41608593
Alignment:
Q  67 tgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactc 132  Q
    ||||| ||||||||||| ||||||| ||||||||||||||||||   ||| |||||||||| ||||    
T  41608528 tgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaaggatgtttatgtatcataactc 41608593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 127
Target Start/End: Complemental strand, 44454044 - 44453984
Alignment:
Q  67 tgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcat 127  Q
    ||||| |||||||||||||| ||||  | ||||||||||| |||| |||||||||||||||    
T  44454044 tgtcagatttttgtgtgggtatcaagagatgtattgccacttaaaggtgtctatgtatcat 44453984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 26440847 - 26440764
Alignment:
Q  19 gaagagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattg 102  Q
    ||||||| |||||||||| |||| || ||  || | || ||| | |||||||| |||||||||||||||| |||||||||||||    
T  26440847 gaagagagaaaagagaaagtgtgcttatgcgggatccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtattg 26440764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 44334176 - 44334245
Alignment:
Q  38 tgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacc 107  Q
    ||||||||||  |||| || ||||||||||||||  ||||||||||| |||||| | ||||||| |||||    
T  44334176 tgtgtttgtgctgggtccatgtgactacgtgtcaggtttttgtgtggatgtcaatgtgtgtattaccacc 44334245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 5e-35; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 14 - 133
Target Start/End: Original strand, 7465717 - 7465836
Alignment:
Q  14 gagatgaagagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaag 113  Q
    |||| ||||||| |||||||||| |||| |||||  |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||  |    
T  7465717 gagaagaagagataaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaaggg 7465816  T
Q  114 tgtctatgtatcattactct 133  Q
    ||||||||||||||||||||    
T  7465817 tgtctatgtatcattactct 7465836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 9058590 - 9058478
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  |||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||    
T  9058590 gagagaaaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatg 9058491  T
Q  122 tatcattactctt 134  Q
    |||||||||||||    
T  9058490 tatcattactctt 9058478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 28 - 136
Target Start/End: Original strand, 33436096 - 33436204
Alignment:
Q  28 aaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcat 127  Q
    ||||||||| |||| |||||  |||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  33436096 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 33436195  T
Q  128 tactctttt 136  Q
    |||||||||    
T  33436196 tactctttt 33436204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 28863565 - 28863458
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||    
T  28863565 gagataaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatg 28863466  T
Q  122 tatcatta 129  Q
    ||||||||    
T  28863465 tatcatta 28863458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 27 - 133
Target Start/End: Original strand, 5574483 - 5574589
Alignment:
Q  27 aaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatca 126  Q
    |||||||||| |||| |||||  || | ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  5574483 aaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatca 5574582  T
Q  127 ttactct 133  Q
    |||||||    
T  5574583 ttactct 5574589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 10249372 - 10249484
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  |||| ||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||  |||||||||    
T  10249372 gagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatg 10249471  T
Q  122 tatcattactctt 134  Q
    |||||||||||||    
T  10249472 tatcattactctt 10249484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 22 - 129
Target Start/End: Original strand, 19930810 - 19930917
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| ||||||||||  |||| ||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||  |||||||||    
T  19930810 gagagaaaagagaaagtgtgtttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatg 19930909  T
Q  122 tatcatta 129  Q
    ||||||||    
T  19930910 tatcatta 19930917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 13438453 - 13438343
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  |||| ||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||  |||||||||    
T  13438453 gagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtcacctaagggtgtctatg 13438354  T
Q  122 tatcattactc 132  Q
    |||||||||||    
T  13438353 tatcattactc 13438343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 17473130 - 17473020
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  || | ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||  |||||||||    
T  17473130 gagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatg 17473031  T
Q  122 tatcattactc 132  Q
    |||||||||||    
T  17473030 tatcattactc 17473020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 40701588 - 40701478
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  |||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||  |||||||||    
T  40701588 gagagaaaagagaaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatg 40701489  T
Q  122 tatcattactc 132  Q
    |||||||||||    
T  40701488 tatcattactc 40701478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 30915573 - 30915461
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| ||||   |||| ||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||  |||||||||    
T  30915573 gagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttatgtgggggtcaaagggtgtattgccacctaagggtgtctatg 30915474  T
Q  122 tatcattactctt 134  Q
    |||||||||||||    
T  30915473 tatcattactctt 30915461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 22 - 133
Target Start/End: Original strand, 32505638 - 32505749
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||| ||||| |||| |||||  |||| ||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||  |||||||||    
T  32505638 gagagaaaatagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatg 32505737  T
Q  122 tatcattactct 133  Q
    ||||||||||||    
T  32505738 tatcattactct 32505749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 22 - 132
Target Start/End: Original strand, 28381645 - 28381755
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  | || || |||||||||||||| ||||||||||||||||| || |||||||||||||||||  |||||||||    
T  28381645 gagagaaaagagaaagtgtgcttgtgcggagtccatgtgactacgtgtcagatttttgtgtgggtgtcgaaaggtgtattgccacctaagggtgtctatg 28381744  T
Q  122 tatcattactc 132  Q
    |||||||||||    
T  28381745 tatcattactc 28381755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 50 - 135
Target Start/End: Original strand, 38882832 - 38882916
Alignment:
Q  50 gggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactcttt 135  Q
    |||| ||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||  |||||||||||||||||||||||    
T  38882832 gggtccacgtgactacgtgtcagatttttgtgtggatgtcaaagggt-tattgccacctaagggtgtctatgtatcattactcttt 38882916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 17820000 - 17820104
Alignment:
Q  28 aaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcat 127  Q
    ||||||||||||||||||||  |||| ||||| || || ||||| ||||||||||||||||||| ||||||||||||||||| |  ||||||||||||||    
T  17820000 aaagagaaaatgtgtttgtgtggggtccacgtaaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctatagttgtctatgtatcat 17820099  T
Q  128 tactc 132  Q
     ||||    
T  17820100 aactc 17820104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 28 - 136
Target Start/End: Complemental strand, 20700919 - 20700811
Alignment:
Q  28 aaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcat 127  Q
    ||||||||| |||| || ||  |||| ||||||||||||||||| |||||||||| || |||||||||||||||||||| |||   ||||||||||||||    
T  20700919 aaagagaaagtgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtaggagtcaaagggtgtattgccacataaggatgtctatgtatcat 20700820  T
Q  128 tactctttt 136  Q
    |||||||||    
T  20700819 tactctttt 20700811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 27864808 - 27864704
Alignment:
Q  28 aaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcat 127  Q
    ||||||||| |||| || ||  |||| ||||||| ||||||||| |||||||||||| ||||||||||||||||||||| |||  |||||||||||||||    
T  27864808 aaagagaaagtgtgcttttgcggggtccacgtgattacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 27864709  T
Q  128 tactc 132  Q
    |||||    
T  27864708 tactc 27864704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 38273132 - 38273246
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| | |||  |||| || ||| |||||||||| |||||||||||||||| |||||||||||||||| |||| | ||||||||    
T  38273132 gagagaaaagagaaagtgtgctagtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgttaaagggtgtattgccatctaagaatgtctatg 38273231  T
Q  122 tatcattactctttt 136  Q
    |||||| ||||||||    
T  38273232 tatcataactctttt 38273246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 22 - 132
Target Start/End: Original strand, 40613892 - 40614002
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  |||| || ||| | |||||||| ||||||||||||||||||||||||||||||||||||||   ||||||||    
T  40613892 gagagaaaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatg 40613991  T
Q  122 tatcattactc 132  Q
    |||||| ||||    
T  40613992 tatcataactc 40614002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 42257303 - 42257189
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  |||| || ||| | |||||||| |||||| ||||||||||||| | ||||||||||||||||  ||||||||    
T  42257303 gagagaaaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttttatgtgggtgtcaaatgatgtattgccacctaaagatgtctatg 42257204  T
Q  122 tatcattactctttt 136  Q
    |||||| ||||||||    
T  42257203 tatcataactctttt 42257189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 4060762 - 4060685
Alignment:
Q  55 cacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactc 132  Q
    ||||| ||||||||||| |||||||||||| ||||||| ||||||||| |||||||  ||||||||||||||||||||    
T  4060762 cacgtaactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactc 4060685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 135
Target Start/End: Original strand, 26891500 - 26891607
Alignment:
Q  28 aaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcat 127  Q
    |||||||||||||| ||||    ||| |||||||| || ||||| ||||||||||||||||| | ||||||||||||||||||  ||| |||||||||||    
T  26891500 aaagagaaaatgtgcttgttcgaggtccacgtgaccacatgtcagatttttgtgtgggtgtctaggggtgtattgccacctaagggtggctatgtatcat 26891599  T
Q  128 tactcttt 135  Q
     |||||||    
T  26891600 aactcttt 26891607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 64 - 133
Target Start/End: Complemental strand, 33436279 - 33436210
Alignment:
Q  64 acgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactct 133  Q
    |||||||| |||||| ||||||||||||| |||||||||||| ||||   ||||||||||||||||||||    
T  33436279 acgtgtcagatttttatgtgggtgtcaaaaggtgtattgccatctaaggatgtctatgtatcattactct 33436210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 41575242 - 41575138
Alignment:
Q  28 aaagagaaaatgtgtttgtgaaggg-tacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatca 126  Q
    ||||||||| |||| ||||| |||| | ||| |||| || |||||||||||||||||  |||||||||||||||| ||| ||||   |||||||||||||    
T  41575242 aaagagaaagtgtgcttgtgtaggggtccacatgaccacatgtcaaatttttgtgtgaatgtcaaagggtgtattaccatctaaggatgtctatgtatca 41575143  T
Q  127 ttact 131  Q
    |||||    
T  41575142 ttact 41575138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 132
Target Start/End: Complemental strand, 43490186 - 43490121
Alignment:
Q  67 tgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactc 132  Q
    ||||| ||||||||||||||||||| |||||||||| |||||||  |||| |||||||||| ||||    
T  43490186 tgtcagatttttgtgtgggtgtcaaggggtgtattgtcacctaagggtgtttatgtatcataactc 43490121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 62 - 133
Target Start/End: Complemental strand, 2533193 - 2533123
Alignment:
Q  62 ctacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactct 133  Q
    |||||||||| |||||||||||| ||||||||| ||||||||||| |||   |||||||||||||| |||||    
T  2533193 ctacgtgtcagatttttgtgtgg-tgtcaaaggatgtattgccacttaaggatgtctatgtatcataactct 2533123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 67 - 110
Target Start/End: Original strand, 2997522 - 2997565
Alignment:
Q  67 tgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaa 110  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||    
T  2997522 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaa 2997565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 133
Target Start/End: Complemental strand, 36168946 - 36168835
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| | || |||||  |||| || ||| | |||||||||||||||||||||| || ||||| ||||||| || ||||   ||||||||    
T  36168946 gagagaaaagagaaagtatgcttgtgcggggtccatgtggccacgtgtcaaatttttgtgtgggagttaaaggatgtattgtcatctaaggatgtctatg 36168847  T
Q  122 tatcattactct 133  Q
    |||||| |||||    
T  36168846 tatcataactct 36168835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 126
Target Start/End: Complemental strand, 3440083 - 3439985
Alignment:
Q  28 aaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatca 126  Q
    |||||||||||||| |||||  |||| ||||| |  || ||| | ||||||||||||||||| | | ||||||||||||||||  ||||||| ||||||    
T  3440083 aaagagaaaatgtgcttgtgcggggtccacgtaatcacatgttagatttttgtgtgggtgtccaggagtgtattgccacctaagggtgtctacgtatca 3439985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 136
Target Start/End: Original strand, 45097770 - 45097839
Alignment:
Q  67 tgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactctttt 136  Q
    ||||| |||||||| |||||||||| || |||||||||||||||   ||| |||||||||| ||||||||    
T  45097770 tgtcagatttttgtatgggtgtcaagggatgtattgccacctaaggatgtttatgtatcataactctttt 45097839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 63 - 134
Target Start/End: Complemental strand, 17823853 - 17823782
Alignment:
Q  63 tacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactctt 134  Q
    ||||||||| ||||||||||||||||  | |  |||||||||||||||   ||| |||||||||||||||||    
T  17823853 tacgtgtcagatttttgtgtgggtgttcaggaatgtattgccacctaaggatgtatatgtatcattactctt 17823782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 132
Target Start/End: Complemental strand, 38732419 - 38732354
Alignment:
Q  67 tgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactc 132  Q
    ||||| ||||||||||||||||||| || ||||||| ||| |||  |||| |||||||||| ||||    
T  38732419 tgtcagatttttgtgtgggtgtcaagggatgtattgtcacataagggtgtttatgtatcataactc 38732354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 67 - 136
Target Start/End: Complemental strand, 13365418 - 13365347
Alignment:
Q  67 tgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaa--aagtgtctatgtatcattactctttt 136  Q
    ||||| ||||||||||||||||||| |||| |||||||| ||||    |||| |||||||||| ||||||||    
T  13365418 tgtcagatttttgtgtgggtgtcaaggggtatattgccatctaagggtgtgtttatgtatcataactctttt 13365347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 2e-34; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 15832687 - 15832573
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||||||| |||||| ||| | |||||||||||||||||||||||||||||||||||||| | | ||||| |||||||| |||||||||    
T  15832687 gagaaaaaagagaaaatgtatttgtgcaggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaatgatttattgtcacctaaaggtgtctatg 15832588  T
Q  122 tatcattactctttt 136  Q
    |||||||||||||||    
T  15832587 tatcattactctttt 15832573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 32869788 - 32869678
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||    
T  32869788 gagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatg 32869689  T
Q  122 tatcattactc 132  Q
    |||| ||||||    
T  32869688 tatctttactc 32869678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 22 - 129
Target Start/End: Original strand, 22880648 - 22880755
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  |||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||  |||||||||    
T  22880648 gagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagaattttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatg 22880747  T
Q  122 tatcatta 129  Q
    ||||||||    
T  22880748 tatcatta 22880755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 22 - 133
Target Start/End: Complemental strand, 11427728 - 11427615
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaa--gtgtcta 119  Q
    |||| |||||||||| |||| |||||  || | ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |  |||||||    
T  11427728 gagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagagggtgtcta 11427629  T
Q  120 tgtatcattactct 133  Q
    ||||||||||||||    
T  11427628 tgtatcattactct 11427615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 17598664 - 17598554
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  |||| |||||||| |||||||| |||||||||||||||||||| | |||||||||||||||  |||||||||    
T  17598664 gagagaaaagagaaagtgtgcttgtgcggggtccacgtgacaacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatg 17598565  T
Q  122 tatcattactc 132  Q
    |||||||||||    
T  17598564 tatcattactc 17598554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 6209455 - 6209568
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| | |||  |||| |||||||||||||| || ||||||||||| ||||||||  ||||||||||||||||  |||||||||    
T  6209455 gagagaaaagagaaagtgtgctagtgcggggtccacgtgactacgtgacagatttttgtgtgagtgtcaaatagtgtattgccacctaagggtgtctatg 6209554  T
Q  122 tatcattactcttt 135  Q
    ||||||||||||||    
T  6209555 tatcattactcttt 6209568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 23128117 - 23128231
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  || | ||||||||||||||||| |||||||||||||||||||||| ||||||  ||| |||| ||||||||     
T  23128117 gagagaaaagagaaagtgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattatcacataaaggtgtctata 23128216  T
Q  122 tatcattactctttt 136  Q
    |||||||| ||||||    
T  23128217 tatcattattctttt 23128231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 29857904 - 29857827
Alignment:
Q  55 cacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactc 132  Q
    ||||| ||||||||||| |||||||||||||||| ||| |||||||||||| ||||| ||||||||||||||||||||    
T  29857904 cacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcattactc 29857827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 56 - 132
Target Start/End: Original strand, 31109424 - 31109500
Alignment:
Q  56 acgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactc 132  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||||||  ||||||||  ||||||||||    
T  31109424 acgtgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctattaatcattactc 31109500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 22 - 133
Target Start/End: Complemental strand, 31976358 - 31976247
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  |||| || ||||| |||||||| |||||||||||||||| ||||||| |||||||||||||   ||||||||    
T  31976358 gagagaaaagagaaagtgtgcttgtgcggggttcatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtatattgccacctaaggatgtctatg 31976259  T
Q  122 tatcattactct 133  Q
    |||||| |||||    
T  31976258 tatcataactct 31976247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 27 - 136
Target Start/End: Original strand, 31110756 - 31110863
Alignment:
Q  27 aaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatca 126  Q
    |||||||||| |||| ||||| ||||| || |||  ||||||||| ||||||||| |  |||||||||||||||||||||||||   |||||||||||||    
T  31110756 aaaagagaaagtgtgcttgtgcagggtccatgtggttacgtgtcagatttttgtgag--tgtcaaagggtgtattgccacctaaggatgtctatgtatca 31110853  T
Q  127 ttactctttt 136  Q
    | ||||||||    
T  31110854 taactctttt 31110863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 135
Target Start/End: Original strand, 30341395 - 30341463
Alignment:
Q  67 tgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactcttt 135  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||  |||| |||||||||| |||||||    
T  30341395 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactcttt 30341463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 67 - 134
Target Start/End: Original strand, 15990077 - 15990144
Alignment:
Q  67 tgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactctt 134  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||  |||| |||||||||| ||||||    
T  15990077 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactctt 15990144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 15508059 - 15508124
Alignment:
Q  67 tgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactc 132  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||  |||| |||||||||| ||||    
T  15508059 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 15508124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 12732550 - 12732478
Alignment:
Q  64 acgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactctttt 136  Q
    |||||||| ||||||||||||||||||| |  | ||||||||| ||| | |||||||||||||||||||||||    
T  12732550 acgtgtcagatttttgtgtgggtgtcaatgattatattgccacttaagaatgtctatgtatcattactctttt 12732478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 31953026 - 31953130
Alignment:
Q  28 aaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcat 127  Q
    ||||||||| ||||||||||   ||| ||| |||  || ||||| |||||| |||||||||||| ||||||||||||||||||   ||||||| ||||||    
T  31953026 aaagagaaagtgtgtttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatctatcat 31953125  T
Q  128 tactc 132  Q
    |||||    
T  31953126 tactc 31953130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 27 - 128
Target Start/End: Original strand, 28536483 - 28536582
Alignment:
Q  27 aaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatca 126  Q
    |||||||||| |||| |||||  |||| ||| ||||  ||||||| ||||||||||||||||||| || |||||||||||||||   ||| |||||||||    
T  28536483 aaaagagaaagtgtgcttgtgtggggtccacatgac--cgtgtcagatttttgtgtgggtgtcaagggttgtattgccacctaaggatgtttatgtatca 28536580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 56 - 136
Target Start/End: Complemental strand, 946452 - 946372
Alignment:
Q  56 acgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactctttt 136  Q
    ||||||||| |||||| ||||||| || ||||||||||||||||||  |||||||   |||||||||||| ||||| ||||    
T  946452 acgtgactaggtgtcagatttttgggtaggtgtcaaagggtgtattatcacctaaggatgtctatgtatcgttactttttt 946372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 127
Target Start/End: Original strand, 9379708 - 9379807
Alignment:
Q  28 aaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcat 127  Q
    ||||||||||||||||||||   | | ||| || | ||||||||||||||||| |||||||||| || ||||||| || ||||   ||||||||||||||    
T  9379708 aaagagaaaatgtgtttgtgtgagatccacatggccacgtgtcaaatttttgtatgggtgtcaagggatgtattgtcatctaaggatgtctatgtatcat 9379807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 110
Target Start/End: Complemental strand, 4231616 - 4231570
Alignment:
Q  64 acgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaa 110  Q
    |||||||| ||||||||||||||| ||| ||||||||||||||||||    
T  4231616 acgtgtcagatttttgtgtgggtggcaaggggtgtattgccacctaa 4231570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 2e-34; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 18520874 - 18520988
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||    
T  18520874 gagataaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatg 18520973  T
Q  122 tatcattactctttt 136  Q
    |||||||| ||||||    
T  18520974 tatcattattctttt 18520988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 22 - 132
Target Start/End: Original strand, 33149628 - 33149738
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  || | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||    
T  33149628 gagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatg 33149727  T
Q  122 tatcattactc 132  Q
    |||||||||||    
T  33149728 tatcattactc 33149738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 36732932 - 36733044
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  |||| |||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||  |||||||||    
T  36732932 gagagaaaagagaaagtgtgcttgtgcggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagggtgtattgctacctaagggtgtctatg 36733031  T
Q  122 tatcattactctt 134  Q
    |||||||||||||    
T  36733032 tatcattactctt 36733044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 22 - 133
Target Start/End: Complemental strand, 2740384 - 2740273
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  || | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||   ||||||||    
T  2740384 gagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatg 2740285  T
Q  122 tatcattactct 133  Q
    ||||||||||||    
T  2740284 tatcattactct 2740273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 22 - 133
Target Start/End: Complemental strand, 6679808 - 6679697
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||||||||||||||  |||| || ||||| |||||||| |||||||||||||||||||| ||||||||||||||||||  ||||||||    
T  6679808 gagagaaaagagaaaatgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaagatgtctatg 6679709  T
Q  122 tatcattactct 133  Q
    |||||| |||||    
T  6679708 tatcataactct 6679697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 14831924 - 14831814
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||| ||||| |||| |||||  || | ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  14831924 gagaaaaaaaagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatg 14831825  T
Q  122 tatcattactc 132  Q
    |||||||||||    
T  14831824 tatcattactc 14831814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 40145517 - 40145407
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  |||| ||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||  |||||||||    
T  40145517 gagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaagggtgtattgccacctaagggtgtctatg 40145418  T
Q  122 tatcattactc 132  Q
    |||||||||||    
T  40145417 tatcattactc 40145407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 29 - 137
Target Start/End: Complemental strand, 13811755 - 13811647
Alignment:
Q  29 aagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcatt 128  Q
    |||||||| |||| |||||  |||| ||||||||||||||||| |||||||||||||||||||| | |||||||||||||||  ||||||||||||| ||    
T  13811755 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatcttt 13811656  T
Q  129 actcttttc 137  Q
    |||||||||    
T  13811655 actcttttc 13811647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 28177885 - 28177775
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| ||||||||||  |||| || ||||| |||||||| ||||||||||||||||||||||||||||||||||||||   ||||||||    
T  28177885 gagagaaaagagaaagtgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatg 28177786  T
Q  122 tatcattactc 132  Q
    |||||| ||||    
T  28177785 tatcataactc 28177775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 35785309 - 35785199
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  || | ||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||  |||||||||    
T  35785309 gagagaaaagagaaagtgtgattgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatg 35785210  T
Q  122 tatcattactc 132  Q
    |||||||||||    
T  35785209 tatcattactc 35785199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 42414297 - 42414402
Alignment:
Q  27 aaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatca 126  Q
    |||||| ||| |||| |||||  |||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||   ||||||||||||||    
T  42414297 aaaagataaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctactggtgtctatgtatca 42414396  T
Q  127 ttactc 132  Q
    ||||||    
T  42414397 ttactc 42414402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 35943888 - 35943992
Alignment:
Q  28 aaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcat 127  Q
    ||||||||| |||| |||||  || | ||||| ||||||||||| |||||||||||||||||||| | |||||||||||||||  |||||||||||||||    
T  35943888 aaagagaaagtgtgcttgtgtgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatcat 35943987  T
Q  128 tactc 132  Q
     ||||    
T  35943988 aactc 35943992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 73 - 136
Target Start/End: Original strand, 36875644 - 36875707
Alignment:
Q  73 atttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactctttt 136  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||    
T  36875644 atttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactttttt 36875707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 33825319 - 33825424
Alignment:
Q  27 aaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatca 126  Q
    |||||||||| |||| ||||| | ||| ||| |||  |||||||| |||||| |||||||||||| | |||||||||||||||| | |||||||| ||||    
T  33825319 aaaagagaaagtgtgcttgtgtaaggttcacatgaacacgtgtcagatttttatgtgggtgtcaaggagtgtattgccacctaagaatgtctatgcatca 33825418  T
Q  127 ttactc 132  Q
    ||||||    
T  33825419 ttactc 33825424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 135
Target Start/End: Original strand, 3921300 - 3921368
Alignment:
Q  67 tgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactcttt 135  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||  |||| |||||||||| |||||||    
T  3921300 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactcttt 3921368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 15409600 - 15409712
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||| | |||| |||||  |||| || ||| |||||||||| |||||||||||||||||||||  ||||||| |||||||   ||||||||    
T  15409600 gagagaaaagagagagtgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgtcaaagaatgtattgtcacctaaggatgtctatg 15409699  T
Q  122 tatcattactctt 134  Q
    |||||| ||||||    
T  15409700 tatcataactctt 15409712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 133
Target Start/End: Original strand, 41470434 - 41470517
Alignment:
Q  50 gggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactct 133  Q
    |||| ||||||||||||||||| |||||| | ||  | | ||||| |||||||||||||||| |||||||||||| ||||||||    
T  41470434 gggtccacgtgactacgtgtcagatttttatatgaattttaaaggatgtattgccacctaaaggtgtctatgtattattactct 41470517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 2252203 - 2252269
Alignment:
Q  67 tgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactct 133  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||   ||| |||||||||| |||||    
T  2252203 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaggatgtttatgtatcataactct 2252269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 55 - 137
Target Start/End: Complemental strand, 31009065 - 31008983
Alignment:
Q  55 cacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactcttttc 137  Q
    ||||||||||||||||| ||||||||||||||||  |||  ||||||| |||||||   ||| |||||||||| |||||||||    
T  31009065 cacgtgactacgtgtcagatttttgtgtgggtgtggaagaatgtattgtcacctaaggatgtttatgtatcataactcttttc 31008983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 26720621 - 26720516
Alignment:
Q  27 aaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatca 126  Q
    |||||||||| |||| |||||  || | || ||| | |||||||| |||||| ||| ||||| |||||||||||||||||||||   |||||||||||||    
T  26720621 aaaagagaaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatca 26720522  T
Q  127 ttactc 132  Q
    | ||||    
T  26720521 taactc 26720516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 26990370 - 26990265
Alignment:
Q  27 aaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatca 126  Q
    |||||||||| |||| |||||  || | || ||| | |||||||| |||||| ||| ||||| |||||||||||||||||||||   |||||||||||||    
T  26990370 aaaagagaaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatca 26990271  T
Q  127 ttactc 132  Q
    | ||||    
T  26990270 taactc 26990265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 73 - 134
Target Start/End: Original strand, 39688938 - 39688999
Alignment:
Q  73 atttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactctt 134  Q
    ||||||||||||||||||| || ||||||||||| |||  |||| |||||||||| ||||||    
T  39688938 atttttgtgtgggtgtcaagggatgtattgccacttaagggtgtttatgtatcataactctt 39688999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 21370108 - 21370048
Alignment:
Q  28 aaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgt 88  Q
    ||||||||||||||||||||  |||| |||||||| || ||||| ||||||| ||||||||    
T  21370108 aaagagaaaatgtgtttgtgcggggtccacgtgaccacatgtcagatttttgagtgggtgt 21370048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 73 - 127
Target Start/End: Complemental strand, 10356694 - 10356639
Alignment:
Q  73 atttttgtgtgggtgtcaaaggg-tgtattgccacctaaaagtgtctatgtatcat 127  Q
    ||||||||||||||||||| ||| |||||||||||||||   ||||||||||||||    
T  10356694 atttttgtgtgggtgtcaatgggatgtattgccacctaaggatgtctatgtatcat 10356639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 110
Target Start/End: Complemental strand, 16327969 - 16327923
Alignment:
Q  64 acgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaa 110  Q
    |||||||| |||||| |||||||||||| || |||||||||||||||    
T  16327969 acgtgtcagatttttatgtgggtgtcaatggatgtattgccacctaa 16327923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 135
Target Start/End: Complemental strand, 38296273 - 38296200
Alignment:
Q  62 ctacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactcttt 135  Q
    |||||||||  |||||||||||||| | ||  ||||||||| ||||||| |  ||||||||||||| |||||||    
T  38296273 ctacgtgtctgatttttgtgtgggtattaagaggtgtattgacacctaagatagtctatgtatcataactcttt 38296200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 132
Target Start/End: Original strand, 20073516 - 20073616
Alignment:
Q  32 agaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattact 131  Q
    ||||| |||| ||||| ||||| ||||||   |||||  | |||||| |||| |||||||||||||||||| || ||||   ||||||| ||||||||||    
T  20073516 agaaagtgtgcttgtgcagggtccacgtggtcacgtgcaagatttttatgtgagtgtcaaagggtgtattgtcatctaatgatgtctatatatcattact 20073615  T
Q  132 c 132  Q
    |    
T  20073616 c 20073616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 2e-34; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 49607524 - 49607410
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  || | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||    
T  49607524 gagagaaaagagaaagtgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatg 49607425  T
Q  122 tatcattactctttt 136  Q
    |||||||||||||||    
T  49607424 tatcattactctttt 49607410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 53982121 - 53982011
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||    
T  53982121 gagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatg 53982022  T
Q  122 tatcattactc 132  Q
    |||||||||||    
T  53982021 tatcattactc 53982011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 22 - 133
Target Start/End: Complemental strand, 17470515 - 17470404
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  |||| ||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||| |||||||||    
T  17470515 gagagaaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccacctaaaggtgtctatg 17470416  T
Q  122 tatcattactct 133  Q
    ||||||||||||    
T  17470415 tatcattactct 17470404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 28 - 134
Target Start/End: Original strand, 33118847 - 33118953
Alignment:
Q  28 aaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcat 127  Q
    ||||||||| ||||||| ||| || | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||    
T  33118847 aaagagaaagtgtgtttctgagggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcat 33118946  T
Q  128 tactctt 134  Q
     ||||||    
T  33118947 aactctt 33118953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 33644310 - 33644200
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||  |||||||||    
T  33644310 gagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacccaagggtgtctatg 33644211  T
Q  122 tatcattactc 132  Q
    |||||||||||    
T  33644210 tatcattactc 33644200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 29 - 134
Target Start/End: Original strand, 27714888 - 27714993
Alignment:
Q  29 aagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcatt 128  Q
    |||||||| |||| |||||  |||| ||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  27714888 aagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaaggtgtctatgtatcatt 27714987  T
Q  129 actctt 134  Q
    ||||||    
T  27714988 actctt 27714993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 11095350 - 11095455
Alignment:
Q  27 aaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatca 126  Q
    |||||||||| ||||||| ||  ||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  11095350 aaaagagaaagtgtgtttatgcggggtac--gtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatca 11095447  T
Q  127 ttactctt 134  Q
    ||||||||    
T  11095448 ttactctt 11095455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 54868885 - 54868997
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  |||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||  |||||||||    
T  54868885 gagagaaaagagaaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatg 54868984  T
Q  122 tatcattactctt 134  Q
    |||||||||||||    
T  54868985 tatcattactctt 54868997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 22 - 127
Target Start/End: Complemental strand, 52629410 - 52629305
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| ||||   |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||    
T  52629410 gagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatg 52629311  T
Q  122 tatcat 127  Q
    ||||||    
T  52629310 tatcat 52629305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 31456799 - 31456685
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  |||| ||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||   |||||||||    
T  31456799 gagagaaaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccgcctatgggtgtctatg 31456700  T
Q  122 tatcattactctttt 136  Q
    |||||||||| ||||    
T  31456699 tatcattactttttt 31456685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 8076497 - 8076393
Alignment:
Q  28 aaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcat 127  Q
    ||||||||| |||| |||||  |||| ||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||  |||| ||||||||||    
T  8076497 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagggtgtttatgtatcat 8076398  T
Q  128 tactc 132  Q
    |||||    
T  8076397 tactc 8076393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 22 - 132
Target Start/End: Original strand, 26141522 - 26141632
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  |||| || ||||| |||||||| |||||||||||||||| |||||||||||||||||||||   ||||||||    
T  26141522 gagagaaaagagaaagtgtgcttgtgtggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatg 26141621  T
Q  122 tatcattactc 132  Q
    |||||| ||||    
T  26141622 tatcataactc 26141632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 48587078 - 48587187
Alignment:
Q  19 gaagagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtct 118  Q
    ||||||| |||||||||| |||  |||||  || | ||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||  || |||    
T  48587078 gaagagagaaaagagaaagtgtacttgtgcgggatccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtatct 48587177  T
Q  119 atgtatcatt 128  Q
    ||||||||||    
T  48587178 atgtatcatt 48587187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 55 - 135
Target Start/End: Original strand, 36707447 - 36707527
Alignment:
Q  55 cacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactcttt 135  Q
    ||||| ||||||||||| |||||||||||| ||||||||||||||||| |||||||  || ||||||||||||||||||||    
T  36707447 cacgtaactacgtgtcagatttttgtgtggatgtcaaagggtgtattgtcacctaagggtatctatgtatcattactcttt 36707527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 133
Target Start/End: Original strand, 24699950 - 24700055
Alignment:
Q  28 aaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcat 127  Q
    ||||||||| |||||||||  ||||| |||||| | ||||| || |||||| ||||||||||||| |||||||||||| ||||   ||||||||||||||    
T  24699950 aaagagaaagtgtgtttgtacagggtccacgtggccacgtgccagatttttatgtgggtgtcaaaaggtgtattgccaactaaggatgtctatgtatcat 24700049  T
Q  128 tactct 133  Q
    ||||||    
T  24700050 tactct 24700055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 28 - 128
Target Start/End: Original strand, 30801729 - 30801829
Alignment:
Q  28 aaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcat 127  Q
    |||||||||||||| |||||  |||| ||  ||||||| ||||| |||||||||||||| ||||||||||||||  |||||||  |||||||||||||||    
T  30801729 aaagagaaaatgtgcttgtgtggggtccatatgactacatgtcatatttttgtgtgggtatcaaagggtgtattatcacctaagggtgtctatgtatcat 30801828  T
Q  128 t 128  Q
    |    
T  30801829 t 30801829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 133
Target Start/End: Complemental strand, 9563101 - 9562998
Alignment:
Q  30 agagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcatta 129  Q
    ||||||| |||||||||| ||| | ||||||||||||||||| |||||| | ||| ||||||||| ||||||| || ||||  |||| ||||||||||||    
T  9563101 agagaaagtgtgtttgtgcaggatccacgtgactacgtgtcagatttttatatggatgtcaaaggttgtattgtcatctaatggtgtttatgtatcatta 9563002  T
Q  130 ctct 133  Q
    ||||    
T  9563001 ctct 9562998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 127
Target Start/End: Complemental strand, 26754799 - 26754700
Alignment:
Q  28 aaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcat 127  Q
    |||||||||||||| |||||  |||| || ||||| || ||||| |||||||||||| |||| ||||||||||||||||||||  ||||||||| |||||    
T  26754799 aaagagaaaatgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtccaagggtgtattgccacctaagggtgtctatgaatcat 26754700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 11347912 - 11348026
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| || || ||||| || ||| | |||||||| |||||||||||| ||||||||| ||||||| |||||||   ||||||||    
T  11347912 gagagaaaagagaaagtgtgcttatgcagggtccatgtggccacgtgtcagatttttgtgtggatgtcaaaggatgtattgtcacctaaggatgtctatg 11348011  T
Q  122 tatcattactctttt 136  Q
    |||||| ||||||||    
T  11348012 tatcataactctttt 11348026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 28 - 133
Target Start/End: Complemental strand, 35536730 - 35536625
Alignment:
Q  28 aaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcat 127  Q
    |||||| || |||| ||||| | ||| ||| |||| |||||||| |||||| ||||||||||||| ||||||||||||| |||   ||||||||||||||    
T  35536730 aaagaggaagtgtgcttgtgtaaggtccacatgaccacgtgtcacatttttatgtgggtgtcaaatggtgtattgccacataaggatgtctatgtatcat 35536631  T
Q  128 tactct 133  Q
    ||||||    
T  35536630 tactct 35536625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 41189754 - 41189866
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  |||| || ||| | ||||||||||||||| ||||||||||||| | |||||||||||||||   ||| ||||    
T  41189754 gagagaaaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcaaatttttatgtgggtgtcaaatgatgtattgccacctaaggatgtatatg 41189853  T
Q  122 tatcattactctt 134  Q
    |||||| ||||||    
T  41189854 tatcataactctt 41189866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 64 - 133
Target Start/End: Complemental strand, 8956830 - 8956761
Alignment:
Q  64 acgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactct 133  Q
    |||||||| |||||| ||||||||||||||| ||||||||||| |||   ||||||||||||||||||||    
T  8956830 acgtgtcacatttttatgtgggtgtcaaaggatgtattgccacataaggatgtctatgtatcattactct 8956761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 14623874 - 14623939
Alignment:
Q  67 tgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactc 132  Q
    ||||| |||||| |||||||||||| ||||||||||||||||||   |||||||||||||||||||    
T  14623874 tgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatgtatcattactc 14623939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 11907481 - 11907369
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| ||||||||||||||| |||||  |||| ||  |||| || ||||| ||||||||||| ||||  | | |||||||| |||||||  |||||||||    
T  11907481 gagagaaaagagaaaatgtgcttgtgcggggtccatatgaccacatgtcagatttttgtgtgagtgttcaggtgtgtattgtcacctaagggtgtctatg 11907382  T
Q  122 tatcattactctt 134  Q
    |||||| ||||||    
T  11907381 tatcataactctt 11907369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 64 - 131
Target Start/End: Original strand, 13898087 - 13898154
Alignment:
Q  64 acgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattact 131  Q
    |||||||| |||||| |||||||||||| ||||||||||||||||||   ||| ||| ||||||||||    
T  13898087 acgtgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtttatctatcattact 13898154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 132
Target Start/End: Original strand, 20764905 - 20765015
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| ||||   |||| || ||| | |||||||| |||||||||||||||| |||| ||||||| ||||||||   ||||||||    
T  20764905 gagagaaaagagaaagtgtgcttgtacggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaaggatgtctatg 20765004  T
Q  122 tatcattactc 132  Q
    | |||| ||||    
T  20765005 tctcataactc 20765015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 132
Target Start/End: Original strand, 51419350 - 51419460
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  ||||  | ||| | |||||||| |||||||||||||||| ||||| ||||||| || ||||   ||||||||    
T  51419350 gagagaaaagagaaagtgtgcttgtgcggggtctatgtggccacgtgtcagatttttgtgtgggtgttaaaggatgtattgtcatctaaggatgtctatg 51419449  T
Q  122 tatcattactc 132  Q
    |||||| ||||    
T  51419450 tatcataactc 51419460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 45058588 - 45058652
Alignment:
Q  67 tgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactc 132  Q
    ||||| |||||| |||||||||||| ||||||||||||||||||  |||| |||||||||| ||||    
T  45058588 tgtcagatttttatgtgggtgtcaa-gggtgtattgccacctaagggtgtttatgtatcataactc 45058652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 41080811 - 41080709
Alignment:
Q  28 aaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcat 127  Q
    |||||||||||||| |||||  |||| ||| |||| || | ||| ||||||| |||||||||||||||||| |||| | ||||   ||||||||||||||    
T  41080811 aaagagaaaatgtgcttgtgt-gggtccacatgaccacatatcagatttttgcgtgggtgtcaaagggtgttttgcta-ctaaggatgtctatgtatcat 41080714  T
Q  128 tactc 132  Q
    |||||    
T  41080713 tactc 41080709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 127
Target Start/End: Complemental strand, 42823176 - 42823116
Alignment:
Q  67 tgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcat 127  Q
    |||||||||||| |||||||||||| ||||||||| |||| |||  |||| ||||||||||    
T  42823176 tgtcaaatttttttgtgggtgtcaaggggtgtattaccacataatggtgtttatgtatcat 42823116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 67 - 110
Target Start/End: Original strand, 36331364 - 36331407
Alignment:
Q  67 tgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaa 110  Q
    ||||| ||||||||||||||||||| ||||| ||||||||||||    
T  36331364 tgtcagatttttgtgtgggtgtcaaggggtgcattgccacctaa 36331407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 134
Target Start/End: Original strand, 35965806 - 35965876
Alignment:
Q  64 acgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactctt 134  Q
    |||||||| |||||| ||||||||||||||| ||||||  ||| |||   ||| |||||||||||||||||    
T  35965806 acgtgtcagatttttatgtgggtgtcaaaggatgtattatcacttaaggatgtatatgtatcattactctt 35965876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 47531975 - 47531865
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  |||| ||  || | |||||||| ||| |||||||| ||| ||| |||||||||||| ||||   ||||||||    
T  47531975 gagagaaaagagaaagtgtgcttgtgcggggttcatatggccacgtgtcagattcttgtgtggatgttaaaaggtgtattgccatctaaggatgtctatg 47531876  T
Q  122 tatcattactc 132  Q
    |||||| ||||    
T  47531875 tatcataactc 47531865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 134
Target Start/End: Original strand, 1758452 - 1758560
Alignment:
Q  28 aaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaa--agggtgtattgccacctaaaagtgtctatgtatc 125  Q
    ||||||||||||||||||||  | || ||||| || |  ||||| |||||||||||||||||||   ||||||||||| |||||    || |||||||||    
T  1758452 aaagagaaaatgtgtttgtgtggagtccacgtaaccatatgtcagatttttgtgtgggtgtcaaggggggtgtattgcaacctatggttgactatgtatc 1758551  T
Q  126 attactctt 134  Q
    || ||||||    
T  1758552 ataactctt 1758560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 36331419 - 36331479
Alignment:
Q  73 atttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactct 133  Q
    |||||||||||| |||||| ||||| ||||||| ||||  |||| |||||||||| |||||    
T  36331419 atttttgtgtggatgtcaaggggtgcattgccatctaagggtgtttatgtatcataactct 36331479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 106
Target Start/End: Original strand, 52629951 - 52629994
Alignment:
Q  62 ctacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccac 106  Q
    |||||||||| | |||||||||||||| |||||||||||||||||    
T  52629951 ctacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 52629994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 3e-33; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 48183039 - 48183151
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||  |||||||||    
T  48183039 gagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacgtaagggtgtctatg 48183138  T
Q  122 tatcattactctt 134  Q
    |||||||||||||    
T  48183139 tatcattactctt 48183151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 28 - 136
Target Start/End: Original strand, 50052424 - 50052532
Alignment:
Q  28 aaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcat 127  Q
    ||||||||| |||| |||||  |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||   ||||||||||||||    
T  50052424 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcat 50052523  T
Q  128 tactctttt 136  Q
    |||||||||    
T  50052524 tactctttt 50052532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 480437 - 480551
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| ||||   |||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||  |||||||||    
T  480437 gagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatg 480536  T
Q  122 tatcattactctttt 136  Q
    |||||||||||||||    
T  480537 tatcattactctttt 480551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 11511457 - 11511562
Alignment:
Q  27 aaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatca 126  Q
    |||||||||| |||| |||||  |||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||  ||||||||||||||    
T  11511457 aaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatca 11511556  T
Q  127 ttactc 132  Q
    ||||||    
T  11511557 ttactc 11511562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 3481758 - 3481654
Alignment:
Q  28 aaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcat 127  Q
    ||||||||| |||| |||||  |||| |||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  3481758 aaagagaaagtgtgcttgtgtggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaaggtgtctatgtatcat 3481659  T
Q  128 tactc 132  Q
    |||||    
T  3481658 tactc 3481654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 24995097 - 24995209
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| ||||||||||||||| |||||  |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||  ||||| ||     
T  24995097 gagagaaaagagaaaatgtgcttgtgcggggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgccatctaagggtgtccata 24995196  T
Q  122 tatcattactctt 134  Q
    |||||||||||||    
T  24995197 tatcattactctt 24995209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 6034154 - 6034044
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  || | ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||  |||||||||    
T  6034154 gagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatg 6034055  T
Q  122 tatcattactc 132  Q
    |||||||||||    
T  6034054 tatcattactc 6034044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 41236457 - 41236347
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  |||| ||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||  |||||||||    
T  41236457 gagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgccacctaagggtgtctatg 41236358  T
Q  122 tatcattactc 132  Q
    |||||||||||    
T  41236357 tatcattactc 41236347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 42044357 - 42044471
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  |||| ||||||||||||||||| ||||||||||||||||  |||| |||||||||||||||  |||||||||    
T  42044357 gagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtacaaggatgtattgccacctaagggtgtctatg 42044456  T
Q  122 tatcattactctttt 136  Q
    |||||||||||||||    
T  42044457 tatcattactctttt 42044471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 28 - 135
Target Start/End: Complemental strand, 29239990 - 29239883
Alignment:
Q  28 aaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcat 127  Q
    ||||||||| |||| |||||  |||| ||||||||||||||| | |||||||||||| ||||||| |||||||||||||||||  |||||||||||||||    
T  29239990 aaagagaaagtgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcat 29239891  T
Q  128 tactcttt 135  Q
    ||||||||    
T  29239890 tactcttt 29239883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 50526194 - 50526271
Alignment:
Q  55 cacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactc 132  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  50526194 cacgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactc 50526271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 22 - 133
Target Start/End: Original strand, 29234235 - 29234346
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  |||| ||||||||||||||||| |||||||||  ||| |||||||||||||||||| ||||  |||||||||    
T  29234235 gagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgaaggtatcaaagggtgtattgccatctaagggtgtctatg 29234334  T
Q  122 tatcattactct 133  Q
    ||||||||||||    
T  29234335 tatcattactct 29234346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 22 - 132
Target Start/End: Original strand, 54473523 - 54473633
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||| ||| |||| |||||  |||| ||||||||||||||| | |||||||||||||||||||| ||||||||| |||||||  |||||||||    
T  54473523 gagagaaaagataaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaatggtgtattgtcacctaagggtgtctatg 54473622  T
Q  122 tatcattactc 132  Q
    |||||||||||    
T  54473623 tatcattactc 54473633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 23608345 - 23608233
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  | || ||||||||||||||||| |||||||||||||||||||| ||||||||| || ||||  ||||||||     
T  23608345 gagataaaagagaaagtgtgcttgtgtggagttcacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgtcatctaagggtgtctata 23608246  T
Q  122 tatcattactctt 134  Q
    |||||||||||||    
T  23608245 tatcattactctt 23608233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 31910302 - 31910192
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| |||||  |||| || ||| ||| |||||| ||||||||||||||||||||| |||||||| |||||||   ||||||||    
T  31910302 gagagaaaagagaaagtgtgcttgtgcggggtccatgtggctatgtgtcagatttttgtgtgggtgtcaaagagtgtattgtcacctaaggatgtctatg 31910203  T
Q  122 tatcattactc 132  Q
    |||||| ||||    
T  31910202 tatcataactc 31910192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 67 - 138
Target Start/End: Original strand, 19670751 - 19670822
Alignment:
Q  67 tgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactcttttca 138  Q
    ||||| ||||||||||| ||||||| ||||||||||||||||||  |||| |||||||||| ||||||||||    
T  19670751 tgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactcttttca 19670822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 67 - 134
Target Start/End: Complemental strand, 32767023 - 32766956
Alignment:
Q  67 tgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactctt 134  Q
    ||||| |||||||| |||||||||| |||||||||||||||||| ||||| |||||||||| ||||||    
T  32767023 tgtcagatttttgtatgggtgtcaaggggtgtattgccacctaagagtgtttatgtatcataactctt 32766956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 65 - 132
Target Start/End: Complemental strand, 40574846 - 40574779
Alignment:
Q  65 cgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactc 132  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||   |||||||||||||| ||||    
T  40574846 cgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcataactc 40574779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 67 - 134
Target Start/End: Complemental strand, 55475256 - 55475189
Alignment:
Q  67 tgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactctt 134  Q
    ||||| ||||||||||||||||||||||||||||||||||||||   ||| |||||||||| ||||||    
T  55475256 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtttatgtatcataactctt 55475189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 134
Target Start/End: Complemental strand, 29977989 - 29977883
Alignment:
Q  28 aaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcat 127  Q
    ||||||||| |||| |||||  |||| ||  ||||||||||||| |||||||||||||||| || |||||||||||||||||    | | ||||||||||    
T  29977989 aaagagaaagtgtgcttgtgtggggtccatatgactacgtgtcagatttttgtgtgggtgttaaggggtgtattgccacctatggttctgtatgtatcat 29977890  T
Q  128 tactctt 134  Q
    |||||||    
T  29977889 tactctt 29977883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 44536781 - 44536846
Alignment:
Q  67 tgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactct 133  Q
    ||||| |||||||||||| |||||| |||||||||||||||||||||||| |||||||||| |||||    
T  44536781 tgtcagatttttgtgtggatgtcaa-gggtgtattgccacctaaaagtgtttatgtatcataactct 44536846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 134
Target Start/End: Complemental strand, 47104612 - 47104542
Alignment:
Q  64 acgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactctt 134  Q
    ||||||||||||||||||||||||||| || |||||||| || |||| | ||||||| |||||||||||||    
T  47104612 acgtgtcaaatttttgtgtgggtgtcagagagtgtattgtcatctaagaatgtctatatatcattactctt 47104542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 50813927 - 50813993
Alignment:
Q  67 tgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactct 133  Q
    ||||| ||||||||||||||||||| ||||||||| |||||||| ||||| |||||||||| |||||    
T  50813927 tgtcagatttttgtgtgggtgtcaaggggtgtattaccacctaagagtgtttatgtatcataactct 50813993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 41824000 - 41823920
Alignment:
Q  14 gagatgaagagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagg 94  Q
    |||| ||||||| |||||||||| |||| |||||  |||| || |||||||||||||| |||||||||||||||| |||||    
T  41824000 gagaagaagagagaaaagagaaagtgtgcttgtgcggggtccatgtgactacgtgtcagatttttgtgtgggtgttaaagg 41823920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 67 - 110
Target Start/End: Original strand, 17983778 - 17983821
Alignment:
Q  67 tgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaa 110  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||    
T  17983778 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaa 17983821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 67 - 134
Target Start/End: Original strand, 29547994 - 29548061
Alignment:
Q  67 tgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactctt 134  Q
    ||||| ||||||||||||||||||| || |||||||||||||||   ||| |||||||||| ||||||    
T  29547994 tgtcagatttttgtgtgggtgtcaagggatgtattgccacctaaggatgtttatgtatcataactctt 29548061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 47986273 - 47986207
Alignment:
Q  67 tgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactct 133  Q
    ||||| |||||||||||| |||||| || |||||||||||||||  |||| |||||||||| |||||    
T  47986273 tgtcagatttttgtgtggatgtcaagggatgtattgccacctaagggtgtttatgtatcataactct 47986207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 127
Target Start/End: Original strand, 53352556 - 53352660
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| | || |||||  |||| ||| | ||||||||||| |||||||||| ||||| ||||  ||||||| |||||||  |||||||||    
T  53352556 gagagaaaagagaaagtatgcttgtgcggggtccacttaactacgtgtcagatttttgtgtaggtgttaaagaatgtattg-cacctaagggtgtctatg 53352654  T
Q  122 tatcat 127  Q
    ||||||    
T  53352655 tatcat 53352660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 55079749 - 55079814
Alignment:
Q  67 tgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactc 132  Q
    ||||| |||||||| ||||||||||  |||||||||||||||||  |||| |||||||||| ||||    
T  55079749 tgtcagatttttgtatgggtgtcaagaggtgtattgccacctaagggtgtttatgtatcataactc 55079814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 18769213 - 18769141
Alignment:
Q  28 aaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtat 100  Q
    ||||||||||||| ||||||  ||||  || |||| |||||||| |||||||||||||||| | |||||||||    
T  18769213 aaagagaaaatgtatttgtgtggggtttacatgaccacgtgtcagatttttgtgtgggtgttagagggtgtat 18769141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 133
Target Start/End: Original strand, 28480267 - 28480369
Alignment:
Q  31 gagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattac 130  Q
    |||||| ||||||||||  |||| ||| ||||||| ||||| ||||||||||| |||| ||   |||||||| |||||||   ||||||||||| || ||    
T  28480267 gagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtattataac 28480366  T
Q  131 tct 133  Q
    |||    
T  28480367 tct 28480369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 133
Target Start/End: Original strand, 28481142 - 28481244
Alignment:
Q  31 gagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattac 130  Q
    |||||| ||||||||||  |||| ||| ||||||| ||||| ||||||||||| |||| ||   |||||||| |||||||   ||||||||||| || ||    
T  28481142 gagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtattataac 28481241  T
Q  131 tct 133  Q
    |||    
T  28481242 tct 28481244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 133
Target Start/End: Original strand, 28482017 - 28482119
Alignment:
Q  31 gagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattac 130  Q
    |||||| ||||||||||  |||| ||| ||||||| ||||| ||||||||||| |||| ||   |||||||| |||||||   ||||||||||| || ||    
T  28482017 gagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtattataac 28482116  T
Q  131 tct 133  Q
    |||    
T  28482117 tct 28482119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 8343198 - 8343263
Alignment:
Q  67 tgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactc 132  Q
    ||||| |||||| ||| ||||||||||| |||||||||||||||   ||| |||||||||| ||||    
T  8343198 tgtcagatttttatgtaggtgtcaaaggatgtattgccacctaaggatgtttatgtatcataactc 8343263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 10099 - 10213
Alignment:
Q  22 gagacaaaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatg 121  Q
    |||| |||||||||| |||| ||||    ||| ||||||||||||||||| |||||| ||||| ||||||||| |||||||||||||||| |||||||||    
T  10099 gagagaaaagagaaagtgtgcttgtacgcggtccacgtgactacgtgtcagatttttatgtggatgtcaaaggatgtattgccacctaaaggtgtctatg 10198  T
Q  122 tatcattactctttt 136  Q
    |||||| ||||||||    
T  10199 tatcataactctttt 10213  T

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Target: scaffold1268 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 925 - 1029
Alignment:
Q  28 aaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcat 127  Q
    ||||||||| |||| |||||  || | |||||||||||||||||  ||||||||||| ||| ||||||||||||||||||||||  ||||||||||||||    
T  925 aaagagaaagtgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcat 1024  T
Q  128 tactc 132  Q
    |||||    
T  1025 tactc 1029  T

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Target: scaffold1267 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 925 - 1029
Alignment:
Q  28 aaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcat 127  Q
    ||||||||| |||| |||||  || | |||||||||||||||||  ||||||||||| ||| ||||||||||||||||||||||  ||||||||||||||    
T  925 aaagagaaagtgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcat 1024  T
Q  128 tactc 132  Q
    |||||    
T  1025 tactc 1029  T

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Target: scaffold0237 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 4106 - 4029
Alignment:
Q  55 cacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcattactc 132  Q
    ||||| ||||||||||| |||||||||||||||| ||| |||||||||||| ||||| ||||||||||||||||||||    
T  4106 cacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcattactc 4029  T

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Target: scaffold0110 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 8859 - 8963
Alignment:
Q  28 aaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccacctaaaagtgtctatgtatcat 127  Q
    |||||||||||||  |||||  |||| |||||||||| ||||||||||||||||| | |||||||  |||||||| ||| |||   ||||||| ||||||    
T  8859 aaagagaaaatgtacttgtgtggggtccacgtgactatgtgtcaaatttttgtgtagatgtcaaatagtgtattgtcacttaaggatgtctatatatcat 8958  T
Q  128 tactc 132  Q
     ||||    
T  8959 aactc 8963  T

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Target: scaffold0018 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 107
Target Start/End: Complemental strand, 152563 - 152523
Alignment:
Q  67 tgtcaaatttttgtgtgggtgtcaaagggtgtattgccacc 107  Q
    ||||| ||||||||||||||||||| |||||||||||||||    
T  152563 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacc 152523  T

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Target: scaffold0316 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 17158 - 17077
Alignment:
Q  28 aaagagaaaatgtgtttgtgaagggtacacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgccaccta 109  Q
    |||||||||||||| |||||  |||| || ||||| || ||||| |||||||||||| |||| | || |||||||| |||||    
T  17158 aaagagaaaatgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtcgagggatgtattgcaaccta 17077  T

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