View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21347_low_81 (Length: 232)

Name: NF21347_low_81
Description: NF21347
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21347_low_81
NF21347_low_81
[»] chr3 (9 HSPs)
chr3 (19-217)||(54563263-54563461)
chr3 (19-202)||(44493364-44493547)
chr3 (68-217)||(19822657-19822806)
chr3 (106-173)||(4485684-4485751)
chr3 (97-185)||(36788817-36788905)
chr3 (106-185)||(49640937-49641016)
chr3 (133-185)||(49497740-49497792)
chr3 (34-191)||(12528350-12528507)
chr3 (34-155)||(14483726-14483847)
[»] chr5 (2 HSPs)
chr5 (19-217)||(22787798-22787996)
chr5 (95-195)||(13573038-13573138)
[»] chr8 (3 HSPs)
chr8 (52-215)||(36307752-36307915)
chr8 (49-146)||(13813392-13813489)
chr8 (133-185)||(29337620-29337672)
[»] chr1 (2 HSPs)
chr1 (44-212)||(38490620-38490788)
chr1 (136-185)||(41339249-41339298)
[»] chr7 (6 HSPs)
chr7 (106-209)||(8863938-8864041)
chr7 (19-191)||(26401768-26401940)
chr7 (106-185)||(17244211-17244290)
chr7 (136-215)||(44674044-44674123)
chr7 (136-197)||(48768385-48768446)
chr7 (136-209)||(29960838-29960913)
[»] chr4 (4 HSPs)
chr4 (97-185)||(14262347-14262435)
chr4 (34-167)||(27011474-27011607)
chr4 (133-166)||(17779530-17779563)
chr4 (49-149)||(28859014-28859114)
[»] chr2 (1 HSPs)
chr2 (97-188)||(11551664-11551755)
[»] scaffold0381 (1 HSPs)
scaffold0381 (34-167)||(8178-8312)
[»] scaffold0011 (1 HSPs)
scaffold0011 (133-185)||(188208-188260)
[»] chr6 (2 HSPs)
chr6 (136-194)||(11605895-11605953)
chr6 (136-185)||(20928462-20928511)


Alignment Details
Target: chr3 (Bit Score: 175; Significance: 2e-94; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 19 - 217
Target Start/End: Complemental strand, 54563461 - 54563263
Alignment:
Q  19 attttagcggtcagagctgtcttgggtaccggtaagtacttaggaatgacgtctatgattggaagagataggacagccactttcgcctatattaaggacc 118  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  54563461 attttagcggtcaaagctgtcttgggtaccggtaagtatttaggaatgtcgtctatgattggaagagataggacaaccactttcgcctatattaaggacc 54563362  T
Q  119 gtgtgtggcaacacattaattcttggagtagtaagtgcctctctaaggcagggcgtgaagttatgatcaagtcggttctccaagtcattccttcctatg 217  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  54563361 gtgtgtggcaacgcattaattcttggagtagtaagtgcctctctaaggcagggcgtgaagttatgatcaagtcggttctccaagccattccttcctatg 54563263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 19 - 202
Target Start/End: Original strand, 44493364 - 44493547
Alignment:
Q  19 attttagcggtcagagctgtcttgggtaccggtaagtacttaggaatgacgtctatgattggaagagataggacagccactttcgcctatattaaggacc 118  Q
    |||||||||||| ||||||| |||||||| || ||||| ||||| ||| ||||||||||||| |||||||| ||| |||| || || |||||||  ||||    
T  44493364 attttagcggtccgagctgttttgggtactggcaagtatttaggcatgccgtctatgattggcagagatagaacaaccacatttgcttatattatagacc 44493463  T
Q  119 gtgtgtggcaacacattaattcttggagtagtaagtgcctctctaaggcagggcgtgaagttatgatcaagtcggttctccaag 202  Q
    | ||||||||||| |||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||| || |||||||    
T  44493464 gggtgtggcaacatattaattcgtggagtagcaagtgcctttctaaggcagggcgtgaagttatgatcaagtctgtgctccaag 44493547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 68 - 217
Target Start/End: Complemental strand, 19822806 - 19822657
Alignment:
Q  68 cgtctatgattggaagagataggacagccactttcgcctatattaaggaccgtgtgtggcaacacattaattcttggagtagtaagtgcctctctaaggc 167  Q
    |||||||||| ||||||||||||||  ||||||| ||||| || || || |||||||||||| | |||||||||||||| || ||||| || ||||||||    
T  19822806 cgtctatgataggaagagataggacctccacttttgcctacatcaaagatcgtgtgtggcaaaaaattaattcttggagcagcaagtgtctatctaaggc 19822707  T
Q  168 agggcgtgaagttatgatcaagtcggttctccaagtcattccttcctatg 217  Q
     |||| ||| || ||||||||||||||||| ||||  |||| ||||||||    
T  19822706 ggggcatgaggtcatgatcaagtcggttcttcaagctattctttcctatg 19822657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 106 - 173
Target Start/End: Complemental strand, 4485751 - 4485684
Alignment:
Q  106 tatattaaggaccgtgtgtggcaacacattaattcttggagtagtaagtgcctctctaaggcagggcg 173  Q
    ||||||||||||||||||||||||   || |||||||||||||| ||||||||||| |||||||||||    
T  4485751 tatattaaggaccgtgtgtggcaaaggataaattcttggagtagcaagtgcctctcaaaggcagggcg 4485684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 97 - 185
Target Start/End: Original strand, 36788817 - 36788905
Alignment:
Q  97 actttcgcctatattaaggaccgtgtgtggcaacacattaattcttggagtagtaagtgcctctctaaggcagggcgtgaagttatgat 185  Q
    |||||||| |||||||| |||||||||||| |  | |||||||| |||||| ||||||| || ||||| |||||| ||||||| |||||    
T  36788817 actttcgcttatattaaagaccgtgtgtggaataaaattaattcatggagtggtaagtgtctttctaaagcagggtgtgaagtaatgat 36788905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 185
Target Start/End: Original strand, 49640937 - 49641016
Alignment:
Q  106 tatattaaggaccgtgtgtggcaacacattaattcttggagtagtaagtgcctctctaaggcagggcgtgaagttatgat 185  Q
    ||||| ||||| || ||||||||  | ||||||||||||||| ||||||| |||||||| ||||| ||||| ||||||||    
T  49640937 tatataaaggatcgcgtgtggcagaaaattaattcttggagtggtaagtgtctctctaaagcaggtcgtgaggttatgat 49641016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 49497740 - 49497792
Alignment:
Q  133 attaattcttggagtagtaagtgcctctctaaggcagggcgtgaagttatgat 185  Q
    |||||||||||||||||||| ||  | ||||||||||||||||| ||||||||    
T  49497740 attaattcttggagtagtaaatgtttatctaaggcagggcgtgaggttatgat 49497792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 191
Target Start/End: Complemental strand, 12528507 - 12528350
Alignment:
Q  34 gctgtcttgggtaccggtaagtacttaggaatgacgtctatgattggaagagataggacagccactttcgcctatattaaggaccgtgtgtggcaacaca 133  Q
    ||||| ||||||||  ||||||| ||||| ||| | || || || ||||||||||| ||| | |||||  | |  ||||| ||| |||||||||||   |    
T  12528507 gctgttttgggtacaagtaagtatttagggatgccatccataataggaagagatagaacaactactttttctttcattaaagactgtgtgtggcaaagga 12528408  T
Q  134 ttaattcttggagtagtaagtgcctctctaaggcagggcgtgaagttatgatcaagtc 191  Q
    |||| ||||||||||| |||||||| || ||||| || || || |||||||| |||||    
T  12528407 ttaactcttggagtagcaagtgcctttcaaaggcgggacgggaggttatgattaagtc 12528350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 155
Target Start/End: Original strand, 14483726 - 14483847
Alignment:
Q  34 gctgtcttgggtaccggtaagtacttaggaatgacgtctatgattggaagagataggacagccactttcgcctatattaaggaccgtgtgtggcaacaca 133  Q
    ||||| ||||||||  ||||||||||||| ||| | || ||||| || ||||||||||  || |||||  | | ||| || |||| ||||||||||   |    
T  14483726 gctgttttgggtacaagtaagtacttaggtatgccatccatgatagggagagataggaaggctactttttcttttatcaaagaccatgtgtggcaaagga 14483825  T
Q  134 ttaattcttggagtagtaagtg 155  Q
    |||| |||||||||||||||||    
T  14483826 ttaactcttggagtagtaagtg 14483847  T

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Target: chr5 (Bit Score: 139; Significance: 7e-73; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 19 - 217
Target Start/End: Complemental strand, 22787996 - 22787798
Alignment:
Q  19 attttagcggtcagagctgtcttgggtaccggtaagtacttaggaatgacgtctatgattggaagagataggacagccactttcgcctatattaaggacc 118  Q
    |||||||| ||||||| ||||||||| || |||||||| ||||||||| |||||||||||||||||||||||||| |||| || || |||||||||||||    
T  22787996 attttagcagtcagagttgtcttgggcactggtaagtatttaggaatgccgtctatgattggaagagataggacatccacatttgcttatattaaggacc 22787897  T
Q  119 gtgtgtggcaacacattaattcttggagtagtaagtgcctctctaaggcagggcgtgaagttatgatcaagtcggttctccaagtcattccttcctatg 217  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||    
T  22787896 gtgtgtggcatcacattaattcttggagtagtaagtgcctatctaaggcaggacgtgaagttacgatcaagtcggttctccaagccattccttcctatg 22787798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 195
Target Start/End: Original strand, 13573038 - 13573138
Alignment:
Q  95 ccactttcgcctatattaaggaccgtgtgtggcaacacattaattcttggagtagtaagtgcctctctaaggcagggcgtgaagttatgatcaagtcggt 194  Q
    ||||||| || |||||||||||  | || |||||  | |||||||||| | ||||||||||| | || || |||||||||||||||||||| || |||||    
T  13573038 ccacttttgcttatattaaggaaagagtttggcagaagattaattcttagggtagtaagtgcttatccaaagcagggcgtgaagttatgattaaatcggt 13573137  T
Q  195 t 195  Q
    |    
T  13573138 t 13573138  T

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Target: chr8 (Bit Score: 72; Significance: 7e-33; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 52 - 215
Target Start/End: Complemental strand, 36307915 - 36307752
Alignment:
Q  52 aagtacttaggaatgacgtctatgattggaagagataggacagccactttcgcctatattaaggaccgtgtgtggcaacacattaattcttggagtagta 151  Q
    ||||| ||||| ||| |||| ||||||||  |  |||| ||| ||||||| || ||||||||||| ||||||||||||   |||||||||||||||||||    
T  36307915 aagtatttaggtatgccgtccatgattggtcgtaatagaacatccacttttgcttatattaaggatcgtgtgtggcaaaggattaattcttggagtagta 36307816  T
Q  152 agtgcctctctaaggcagggcgtgaagttatgatcaagtcggttctccaagtcattccttccta 215  Q
    |||| |||||||| ||||| || ||||||||||| ||||| |||||||||| ||||||||||||    
T  36307815 agtgtctctctaaagcaggtcgggaagttatgataaagtcagttctccaagccattccttccta 36307752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 146
Target Start/End: Complemental strand, 13813489 - 13813392
Alignment:
Q  49 ggtaagtacttaggaatgacgtctatgattggaagagataggacagccactttcgcctatattaaggaccgtgtgtggcaacacattaattcttggag 146  Q
    |||||||| ||||| ||| | || ||||||||| | |||||||| |||||||| || ||||| ||||||||||||||||||   || |||||||||||    
T  13813489 ggtaagtatttaggtatgccttccatgattggacgggataggacggccacttttgcttatatcaaggaccgtgtgtggcaaagaataaattcttggag 13813392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 29337672 - 29337620
Alignment:
Q  133 attaattcttggagtagtaagtgcctctctaaggcagggcgtgaagttatgat 185  Q
    ||||||||||||||| ||||||| |||||||| | ||| ||||| ||||||||    
T  29337672 attaattcttggagtggtaagtgtctctctaaagtaggtcgtgaggttatgat 29337620  T

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Target: chr1 (Bit Score: 69; Significance: 4e-31; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 44 - 212
Target Start/End: Complemental strand, 38490788 - 38490620
Alignment:
Q  44 gtaccggtaagtacttaggaatgacgtctatgattggaagagataggacagccactttcgcctatattaaggaccgtgtgtggcaacacattaattcttg 143  Q
    ||||||| ||||| ||||| ||| |||| ||||| ||  | ||||| ||| ||||||| || ||||||||||| ||||||||||||   |||||||||||    
T  38490788 gtaccggaaagtatttaggtatgccgtccatgatcggtcgtgatagaacaaccacttttgcttatattaaggatcgtgtgtggcaaatgattaattcttg 38490689  T
Q  144 gagtagtaagtgcctctctaaggcagggcgtgaagttatgatcaagtcggttctccaagtcattccttc 212  Q
    |||||||||||| |||||||| ||||| || ||||||||||| ||||| ||||| |||| |||||||||    
T  38490688 gagtagtaagtgtctctctaaagcaggtcgggaagttatgataaagtcagttcttcaagccattccttc 38490620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 41339249 - 41339298
Alignment:
Q  136 aattcttggagtagtaagtgcctctctaaggcagggcgtgaagttatgat 185  Q
    |||||||||||| ||||||| || ||||||| ||||||||| ||||||||    
T  41339249 aattcttggagtggtaagtgtctatctaagggagggcgtgaggttatgat 41339298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 3e-16; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 8864041 - 8863938
Alignment:
Q  106 tatattaaggaccgtgtgtggcaacacattaattcttggagtagtaagtgcctctctaaggcagggcgtgaagttatgatcaagtcggttctccaagtca 205  Q
    ||||||||||||||||||||||||   || |||||||||||||| ||||||||||| |||||| | || ||  ||||||| ||||| ||||| |||| ||    
T  8864041 tatattaaggaccgtgtgtggcaaaggataaattcttggagtagcaagtgcctctcaaaggcacgacgggagtttatgattaagtctgttctacaagcca 8863942  T
Q  206 ttcc 209  Q
    ||||    
T  8863941 ttcc 8863938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 191
Target Start/End: Original strand, 26401768 - 26401940
Alignment:
Q  19 attttagcggtcagagctgtcttgggtaccggtaagtacttaggaatgacgtctatgattggaagagataggacagccactttcgcctatattaaggacc 118  Q
    |||||||||||| | ||||| || |||||||||||||| ||||||||| | ||||||||||| |  ||||| | || ||| ||  | || ||||||||||    
T  26401768 attttagcggtccgtgctgttttaggtaccggtaagtatttaggaatgccatctatgattgggatggatagaatagacacattttcttacattaaggacc 26401867  T
Q  119 gtgtgtggcaacacattaattcttggagtagtaagtgcctctctaaggcagggcgtgaagttatgatcaagtc 191  Q
    | || ||||||   ||||| || |||||||| |||||  | || || |||||||| || ||||||||||||||    
T  26401868 gggtttggcaaagaattaactcatggagtagcaagtgtttgtccaaagcagggcgcgaggttatgatcaagtc 26401940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 185
Target Start/End: Complemental strand, 17244290 - 17244211
Alignment:
Q  106 tatattaaggaccgtgtgtggcaacacattaattcttggagtagtaagtgcctctctaaggcagggcgtgaagttatgat 185  Q
    ||||| ||||| || ||||||||  | ||||||||||||||| ||||||| |||||||| ||||| ||||| ||||||||    
T  17244290 tatataaaggatcgggtgtggcagaaaattaattcttggagtggtaagtgtctctctaaagcaggtcgtgaggttatgat 17244211  T

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Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 215
Target Start/End: Original strand, 44674044 - 44674123
Alignment:
Q  136 aattcttggagtagtaagtgcctctctaaggcagggcgtgaagttatgatcaagtcggttctccaagtcattccttccta 215  Q
    ||||||||||| || |||||  | || |||| ||||||  |||||||||||||||||||||| |||| |||||| |||||    
T  44674044 aattcttggagcagcaagtgtttgtccaaggtagggcgcaaagttatgatcaagtcggttcttcaagccattccctccta 44674123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 48768385 - 48768446
Alignment:
Q  136 aattcttggagtagtaagtgcctctctaaggcagggcgtgaagttatgatcaagtcggttct 197  Q
    ||||||||||||||||| ||  | |||||||||||||| || ||||||||||| || |||||    
T  48768385 aattcttggagtagtaattgtttatctaaggcagggcgcgaggttatgatcaaatccgttct 48768446  T

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Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 209
Target Start/End: Original strand, 29960838 - 29960913
Alignment:
Q  136 aattcttggagta--gtaagtgcctctctaaggcagggcgtgaagttatgatcaagtcggttctccaagtcattcc 209  Q
    |||||||||||||  | ||||||||||| ||||||||||| ||  ||||||| ||||| ||||| |||| ||||||    
T  29960838 aattcttggagtatagcaagtgcctctcaaaggcagggcgggagattatgattaagtctgttctacaagccattcc 29960913  T

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Target: chr4 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 185
Target Start/End: Original strand, 14262347 - 14262435
Alignment:
Q  97 actttcgcctatattaaggaccgtgtgtggcaacacattaattcttggagtagtaagtgcctctctaaggcagggcgtgaagttatgat 185  Q
    ||||| ||||||||||| |||||||| |||||  | ||||| |||||||||  |||||||||||| ||||||||||| ||||| |||||    
T  14262347 acttttgcctatattaaagaccgtgtctggcagaaaattaactcttggagtgataagtgcctctcaaaggcagggcgagaagtgatgat 14262435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 167
Target Start/End: Complemental strand, 27011607 - 27011474
Alignment:
Q  34 gctgtcttgggtaccggtaagtacttaggaatgacgtctatgattggaagagataggacagccactttcgcctatattaaggaccgtgtgtggcaacaca 133  Q
    ||||| |||||||| ||||||||| |||| ||| |||| ||||| ||||||||||  ||| | || ||  | |  ||||| |||||||||||||||   |    
T  27011607 gctgttttgggtacaggtaagtacctagggatgtcgtccatgataggaagagataaaacatctacattttctttcattaaagaccgtgtgtggcaaagga 27011508  T
Q  134 ttaattcttggagtagtaagtgcctctctaaggc 167  Q
    |||| |||||||||||||||||||| || |||||    
T  27011507 ttaactcttggagtagtaagtgcctttcgaaggc 27011474  T

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Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 166
Target Start/End: Complemental strand, 17779563 - 17779530
Alignment:
Q  133 attaattcttggagtagtaagtgcctctctaagg 166  Q
    |||||||| |||||||||||||||||||||||||    
T  17779563 attaattcctggagtagtaagtgcctctctaagg 17779530  T

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Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 149
Target Start/End: Original strand, 28859014 - 28859114
Alignment:
Q  49 ggtaagtacttaggaatgacgtctatgattggaagagataggacagccactttcgcctatattaaggaccgtgtgtggcaacacattaattcttggagta 148  Q
    ||||||||||||||  || | |||||||| ||||| ||||| ||| |||| || || |||||||| || | ||| |||||| | || |||||||||||||    
T  28859014 ggtaagtacttaggtttgccatctatgatcggaagggatagaacaaccacgtttgcatatattaaagatcatgtttggcaaaaaatcaattcttggagta 28859113  T
Q  149 g 149  Q
    |    
T  28859114 g 28859114  T

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Target: chr2 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 188
Target Start/End: Original strand, 11551664 - 11551755
Alignment:
Q  97 actttcgcctatattaaggaccgtgtgtggcaacacattaattcttggagtagtaagtgcctctctaaggcagggcgtgaagttatgatcaa 188  Q
    |||||| ||||||| || |||||||| ||| |  | || ||||||||||||||||| ||  | |||||||||||||| ||||||||||||||    
T  11551664 actttctcctatatcaaagaccgtgtctggaagaaaataaattcttggagtagtaaatgtttatctaaggcagggcgcgaagttatgatcaa 11551755  T

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Target: scaffold0381 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 167
Target Start/End: Original strand, 8178 - 8312
Alignment:
Q  34 gctgtcttgggtaccggtaagtacttaggaatgacgtctatgattggaagagataggacagccactttcgcctat-attaaggaccgtgtgtggcaacac 132  Q
    ||||| |||||||| ||||||||| |||| ||| |||| ||||| ||||||||||  ||| | || ||   || | ||||| |||||||||||||||       
T  8178 gctgttttgggtacaggtaagtacctagggatgtcgtccatgataggaagagataaaacatctacatttttctttcattaaagaccgtgtgtggcaaagg 8277  T
Q  133 attaattcttggagtagtaagtgcctctctaaggc 167  Q
    ||||| |||||||||||||||||||| || |||||    
T  8278 attaactcttggagtagtaagtgcctttcgaaggc 8312  T

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Target: scaffold0011 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 188260 - 188208
Alignment:
Q  133 attaattcttggagtagtaagtgcctctctaaggcagggcgtgaagttatgat 185  Q
    ||||||||||||||| ||||||| |||||||| ||||| ||||| ||||||||    
T  188260 attaattcttggagtggtaagtgtctctctaaagcaggtcgtgaggttatgat 188208  T

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Target: chr6 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 11605953 - 11605895
Alignment:
Q  136 aattcttggagtagtaagtgcctctctaaggcagggcgtgaagttatgatcaagtcggt 194  Q
    |||||||||||||||||||| || || || |||||||||||||| ||||| || |||||    
T  11605953 aattcttggagtagtaagtgtctttccaaagcagggcgtgaagtcatgattaaatcggt 11605895  T

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Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 20928462 - 20928511
Alignment:
Q  136 aattcttggagtagtaagtgcctctctaaggcagggcgtgaagttatgat 185  Q
    |||||||||||| ||||||| || ||||||| ||||||||| ||||||||    
T  20928462 aattcttggagtggtaagtgtctatctaagggagggcgtgaggttatgat 20928511  T

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