View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21348_high_1 (Length: 620)

Name: NF21348_high_1
Description: NF21348
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21348_high_1
NF21348_high_1
[»] chr2 (57 HSPs)
chr2 (327-619)||(10157458-10157730)
chr2 (81-218)||(10157811-10157948)
chr2 (1-78)||(3055558-3055635)
chr2 (1-78)||(4683985-4684062)
chr2 (1-78)||(13197763-13197840)
chr2 (1-78)||(15896842-15896919)
chr2 (1-78)||(37990066-37990143)
chr2 (1-78)||(41478692-41478769)
chr2 (1-78)||(44397547-44397624)
chr2 (1-78)||(44398686-44398763)
chr2 (1-80)||(16044370-16044449)
chr2 (1-78)||(37666663-37666740)
chr2 (1-80)||(6648572-6648651)
chr2 (1-78)||(13344484-13344561)
chr2 (1-78)||(16243836-16243913)
chr2 (1-78)||(38917575-38917652)
chr2 (1-78)||(9047808-9047885)
chr2 (1-78)||(12337990-12338067)
chr2 (1-78)||(15372226-15372303)
chr2 (4-79)||(12170455-12170530)
chr2 (1-76)||(30099235-30099310)
chr2 (1-67)||(41492949-41493015)
chr2 (1-72)||(31150659-31150730)
chr2 (24-78)||(41492896-41492950)
chr2 (24-81)||(12337934-12337991)
chr2 (24-80)||(15896918-15896974)
chr2 (24-79)||(15372302-15372357)
chr2 (24-78)||(3055634-3055688)
chr2 (24-78)||(6648519-6648573)
chr2 (24-78)||(9047755-9047809)
chr2 (24-78)||(13197710-13197764)
chr2 (20-78)||(13724102-13724160)
chr2 (24-78)||(37990013-37990067)
chr2 (24-78)||(38917522-38917576)
chr2 (24-78)||(41478639-41478693)
chr2 (24-78)||(44398762-44398816)
chr2 (6-59)||(16734802-16734855)
chr2 (6-47)||(41453090-41453131)
chr2 (1-50)||(44804631-44804680)
chr2 (24-71)||(16243790-16243837)
chr2 (20-67)||(23227344-23227391)
chr2 (24-78)||(13344560-13344614)
chr2 (24-78)||(16044317-16044371)
chr2 (24-78)||(30099182-30099236)
chr2 (24-78)||(37666610-37666664)
chr2 (24-70)||(44397623-44397669)
chr2 (13-78)||(30852682-30852747)
chr2 (24-73)||(44804583-44804632)
chr2 (7-63)||(4553069-4553125)
chr2 (568-616)||(7783494-7783542)
chr2 (24-64)||(36089457-36089497)
chr2 (1-68)||(36688892-36688959)
chr2 (20-63)||(45294395-45294438)
chr2 (24-78)||(10069283-10069337)
chr2 (24-73)||(8349468-8349517)
chr2 (22-63)||(12170414-12170455)
chr2 (20-73)||(16734855-16734908)
[»] chr7 (46 HSPs)
chr7 (81-179)||(29410671-29410769)
chr7 (1-83)||(31319452-31319534)
chr7 (1-83)||(7240744-7240826)
chr7 (1-78)||(1565782-1565859)
chr7 (1-78)||(1738500-1738577)
chr7 (1-78)||(23314192-23314269)
chr7 (1-78)||(38063966-38064043)
chr7 (1-78)||(46840860-46840937)
chr7 (1-83)||(9268751-9268833)
chr7 (1-78)||(7482225-7482302)
chr7 (1-78)||(28536804-28536881)
chr7 (1-78)||(36583395-36583472)
chr7 (1-85)||(38441453-38441537)
chr7 (1-83)||(22285694-22285776)
chr7 (1-78)||(94371-94448)
chr7 (1-78)||(36016249-36016326)
chr7 (1-78)||(4790248-4790325)
chr7 (1-78)||(9575409-9575486)
chr7 (1-62)||(33418392-33418453)
chr7 (4-72)||(40840175-40840243)
chr7 (24-85)||(38441536-38441597)
chr7 (24-80)||(46840936-46840992)
chr7 (24-87)||(7240825-7240888)
chr7 (24-78)||(1738447-1738501)
chr7 (24-78)||(7482301-7482355)
chr7 (24-78)||(9268832-9268886)
chr7 (24-78)||(22285775-22285829)
chr7 (31-80)||(23314137-23314186)
chr7 (24-72)||(33418452-33418500)
chr7 (24-71)||(46877666-46877713)
chr7 (24-78)||(94318-94372)
chr7 (24-78)||(4790324-4790378)
chr7 (24-78)||(31319399-31319453)
chr7 (24-82)||(36016192-36016250)
chr7 (24-78)||(36583471-36583525)
chr7 (24-78)||(38063913-38063967)
chr7 (25-71)||(40840126-40840172)
chr7 (1-78)||(7269458-7269535)
chr7 (24-80)||(9575485-9575541)
chr7 (24-63)||(28469496-28469535)
chr7 (24-63)||(36033241-36033280)
chr7 (24-78)||(1565729-1565783)
chr7 (24-78)||(7661152-7661206)
chr7 (24-78)||(28536751-28536805)
chr7 (25-66)||(7661088-7661129)
chr7 (31-71)||(7269412-7269452)
[»] chr1 (50 HSPs)
chr1 (1-85)||(47216752-47216836)
chr1 (1-83)||(39402019-39402101)
chr1 (1-86)||(1050880-1050965)
chr1 (1-78)||(9981647-9981724)
chr1 (1-78)||(26471118-26471195)
chr1 (1-78)||(27159411-27159488)
chr1 (1-78)||(31842848-31842925)
chr1 (1-78)||(44668146-44668223)
chr1 (1-80)||(44955259-44955338)
chr1 (1-78)||(11795933-11796010)
chr1 (1-78)||(14984837-14984914)
chr1 (1-78)||(23278054-23278131)
chr1 (1-78)||(34042696-34042773)
chr1 (1-78)||(47777534-47777611)
chr1 (4-78)||(12483684-12483758)
chr1 (1-78)||(47588390-47588467)
chr1 (1-78)||(17556752-17556830)
chr1 (1-72)||(47969700-47969772)
chr1 (6-78)||(11897054-11897126)
chr1 (1-78)||(16448161-16448238)
chr1 (1-66)||(25694331-25694396)
chr1 (24-84)||(39401960-39402020)
chr1 (24-78)||(11897130-11897184)
chr1 (4-78)||(12213530-12213604)
chr1 (1-78)||(37552141-37552218)
chr1 (22-78)||(12483628-12483684)
chr1 (24-80)||(31842793-31842849)
chr1 (24-72)||(44955212-44955260)
chr1 (24-80)||(47777479-47777535)
chr1 (24-79)||(11796009-11796064)
chr1 (24-78)||(14984913-14984967)
chr1 (24-78)||(17556829-17556883)
chr1 (24-78)||(25694395-25694449)
chr1 (24-78)||(27159358-27159412)
chr1 (24-78)||(44668093-44668147)
chr1 (24-73)||(9981723-9981772)
chr1 (6-63)||(11989796-11989853)
chr1 (24-80)||(26471063-26471119)
chr1 (24-78)||(1050964-1051018)
chr1 (24-78)||(34042772-34042826)
chr1 (24-70)||(37552217-37552263)
chr1 (24-78)||(47216699-47216753)
chr1 (20-69)||(5392218-5392267)
chr1 (20-81)||(11989853-11989914)
chr1 (24-68)||(12062635-12062679)
chr1 (22-78)||(19391948-19392004)
chr1 (24-71)||(12043679-12043726)
chr1 (21-66)||(12043616-12043661)
chr1 (45-78)||(47678371-47678404)
chr1 (42-78)||(39720779-39720815)
[»] chr8 (53 HSPs)
chr8 (1-84)||(6552649-6552732)
chr8 (1-79)||(12343193-12343271)
chr8 (1-78)||(54665-54742)
chr8 (1-78)||(2890215-2890292)
chr8 (1-78)||(3304331-3304408)
chr8 (1-78)||(7785831-7785908)
chr8 (1-78)||(7805752-7805829)
chr8 (1-78)||(32114528-32114605)
chr8 (1-78)||(43199407-43199484)
chr8 (1-78)||(44498240-44498317)
chr8 (1-80)||(39571256-39571335)
chr8 (1-78)||(12763707-12763784)
chr8 (1-78)||(15888405-15888482)
chr8 (1-78)||(25601053-25601130)
chr8 (1-78)||(31654613-31654690)
chr8 (1-78)||(32211416-32211493)
chr8 (1-78)||(7012171-7012248)
chr8 (1-78)||(33289314-33289391)
chr8 (16-78)||(4245649-4245711)
chr8 (1-78)||(13578857-13578934)
chr8 (1-75)||(28463614-28463688)
chr8 (1-78)||(8587170-8587247)
chr8 (24-78)||(25601000-25601054)
chr8 (24-78)||(54612-54666)
chr8 (24-78)||(2890162-2890216)
chr8 (24-78)||(6552731-6552785)
chr8 (24-78)||(7785778-7785832)
chr8 (7-73)||(17006916-17006982)
chr8 (7-73)||(17570265-17570331)
chr8 (24-78)||(33289261-33289315)
chr8 (24-78)||(39571203-39571257)
chr8 (24-78)||(43199354-43199408)
chr8 (24-85)||(3304271-3304332)
chr8 (24-72)||(12343146-12343194)
chr8 (10-66)||(24692040-24692096)
chr8 (24-80)||(31654689-31654745)
chr8 (1-78)||(27422193-27422267)
chr8 (24-83)||(44498182-44498241)
chr8 (24-78)||(7012247-7012301)
chr8 (24-78)||(7805699-7805753)
chr8 (24-78)||(12763654-12763708)
chr8 (24-78)||(27422266-27422320)
chr8 (24-78)||(32211363-32211417)
chr8 (4-63)||(28999104-28999163)
chr8 (21-71)||(13246801-13246851)
chr8 (24-70)||(15688038-15688084)
chr8 (24-78)||(15888352-15888406)
chr8 (24-78)||(32114475-32114529)
chr8 (45-78)||(6899419-6899452)
chr8 (20-73)||(30171487-30171540)
chr8 (568-620)||(14372932-14372984)
chr8 (31-71)||(24691986-24692026)
chr8 (46-82)||(34157778-34157814)
[»] chr5 (45 HSPs)
chr5 (1-82)||(9395346-9395427)
chr5 (1-78)||(37149008-37149085)
chr5 (1-79)||(11795167-11795245)
chr5 (1-87)||(26350403-26350489)
chr5 (1-78)||(582989-583066)
chr5 (1-78)||(20848074-20848151)
chr5 (1-78)||(23359942-23360019)
chr5 (1-78)||(36563591-36563668)
chr5 (1-78)||(41989460-41989537)
chr5 (1-78)||(13033051-13033128)
chr5 (1-78)||(13103024-13103101)
chr5 (1-78)||(17025624-17025701)
chr5 (1-78)||(37641953-37642031)
chr5 (1-78)||(4443960-4444037)
chr5 (1-78)||(38361744-38361821)
chr5 (1-54)||(21575970-21576023)
chr5 (24-85)||(23360018-23360079)
chr5 (1-71)||(13539920-13539986)
chr5 (1-57)||(6126845-6126901)
chr5 (24-78)||(6126900-6126954)
chr5 (24-78)||(9395426-9395480)
chr5 (24-78)||(13103100-13103154)
chr5 (24-78)||(17025700-17025754)
chr5 (24-78)||(36563538-36563592)
chr5 (24-78)||(41989407-41989461)
chr5 (24-81)||(37148952-37149009)
chr5 (24-78)||(2629620-2629674)
chr5 (34-72)||(11574166-11574204)
chr5 (24-78)||(11795244-11795298)
chr5 (24-78)||(13033127-13033181)
chr5 (24-78)||(21576022-21576076)
chr5 (24-78)||(37642030-37642084)
chr5 (1-79)||(39290774-39290851)
chr5 (23-72)||(3549553-3549602)
chr5 (24-73)||(4444036-4444085)
chr5 (22-71)||(27081014-27081063)
chr5 (20-64)||(2366352-2366396)
chr5 (6-64)||(3549605-3549663)
chr5 (7-69)||(13284695-13284757)
chr5 (24-70)||(36595782-36595828)
chr5 (24-73)||(966224-966273)
chr5 (4-37)||(35904440-35904473)
chr5 (1-69)||(966157-966225)
chr5 (31-71)||(11574046-11574086)
chr5 (24-80)||(20848150-20848205)
[»] chr6 (42 HSPs)
chr6 (1-81)||(26602320-26602400)
chr6 (1-78)||(2830335-2830412)
chr6 (1-78)||(6330115-6330192)
chr6 (1-78)||(8383022-8383099)
chr6 (1-78)||(11572198-11572275)
chr6 (1-78)||(33052847-33052924)
chr6 (1-78)||(8099530-8099607)
chr6 (1-82)||(9644692-9644773)
chr6 (1-82)||(9650709-9650790)
chr6 (1-78)||(13853646-13853723)
chr6 (1-78)||(35031054-35031131)
chr6 (1-78)||(6143554-6143631)
chr6 (1-83)||(6068561-6068643)
chr6 (1-86)||(13043750-13043835)
chr6 (1-78)||(8417846-8417923)
chr6 (5-70)||(6068997-6069062)
chr6 (1-62)||(28747187-28747248)
chr6 (22-78)||(3788111-3788167)
chr6 (24-83)||(8382964-8383023)
chr6 (24-78)||(2830411-2830465)
chr6 (24-78)||(6330191-6330245)
chr6 (21-59)||(6549902-6549940)
chr6 (24-78)||(8099606-8099660)
chr6 (24-78)||(9644772-9644826)
chr6 (24-78)||(9650789-9650843)
chr6 (24-78)||(11572145-11572199)
chr6 (24-78)||(13853593-13853647)
chr6 (24-78)||(26602399-26602453)
chr6 (1-78)||(22896471-22896539)
chr6 (1-73)||(14936510-14936582)
chr6 (24-79)||(8417792-8417847)
chr6 (1-48)||(17992018-17992065)
chr6 (24-78)||(6068642-6068696)
chr6 (24-78)||(35031001-35031055)
chr6 (24-67)||(28747145-28747188)
chr6 (24-79)||(32045157-32045212)
chr6 (24-71)||(33052801-33052848)
chr6 (24-70)||(8186443-8186489)
chr6 (24-70)||(22896538-22896584)
chr6 (22-72)||(31849586-31849636)
chr6 (34-67)||(12473651-12473684)
chr6 (34-79)||(17992074-17992119)
[»] scaffold0204 (2 HSPs)
scaffold0204 (1-84)||(23779-23862)
scaffold0204 (24-78)||(23861-23915)
[»] chr4 (60 HSPs)
chr4 (1-84)||(48336257-48336340)
chr4 (1-79)||(24704369-24704447)
chr4 (1-79)||(53337369-53337447)
chr4 (1-78)||(3372121-3372198)
chr4 (1-78)||(20538739-20538816)
chr4 (1-78)||(47833611-47833688)
chr4 (1-80)||(6121946-6122025)
chr4 (1-78)||(3992976-3993053)
chr4 (1-78)||(26231577-26231654)
chr4 (1-78)||(33551201-33551278)
chr4 (1-78)||(42797732-42797809)
chr4 (1-78)||(43900549-43900626)
chr4 (1-78)||(46797725-46797802)
chr4 (1-82)||(52756671-52756752)
chr4 (4-78)||(3904739-3904813)
chr4 (1-78)||(7579310-7579387)
chr4 (1-78)||(47838670-47838747)
chr4 (1-86)||(51894635-51894720)
chr4 (4-84)||(5986870-5986950)
chr4 (1-78)||(33621796-33621873)
chr4 (5-78)||(40913246-40913319)
chr4 (1-78)||(41469819-41469896)
chr4 (4-66)||(41615732-41615794)
chr4 (1-66)||(3422073-3422137)
chr4 (6-78)||(25855083-25855155)
chr4 (4-67)||(29845656-29845719)
chr4 (24-78)||(4780371-4780425)
chr4 (6-72)||(17236845-17236912)
chr4 (24-79)||(42797808-42797863)
chr4 (24-82)||(51894578-51894636)
chr4 (24-78)||(3422136-3422190)
chr4 (22-72)||(5986950-5987000)
chr4 (24-78)||(6121893-6121947)
chr4 (24-78)||(24704446-24704500)
chr4 (24-78)||(41469766-41469820)
chr4 (24-78)||(47833687-47833741)
chr4 (24-78)||(47838617-47838671)
chr4 (1-63)||(50430471-50430533)
chr4 (7-72)||(17344219-17344284)
chr4 (24-81)||(20538683-20538740)
chr4 (22-78)||(3904683-3904739)
chr4 (24-79)||(43900625-43900680)
chr4 (31-78)||(46797808-46797855)
chr4 (24-78)||(3372197-3372251)
chr4 (24-78)||(3993052-3993106)
chr4 (24-78)||(7579386-7579440)
chr4 (24-78)||(33621872-33621926)
chr4 (31-73)||(40913194-40913236)
chr4 (24-78)||(48336339-48336393)
chr4 (24-78)||(53337446-53337500)
chr4 (10-67)||(6924746-6924802)
chr4 (22-71)||(41615683-41615732)
chr4 (31-78)||(44900080-44900127)
chr4 (22-69)||(45725930-45725977)
chr4 (24-78)||(1716301-1716355)
chr4 (24-78)||(52756751-52756805)
chr4 (24-73)||(45478168-45478217)
chr4 (24-64)||(9876653-9876693)
chr4 (21-73)||(21636196-21636248)
chr4 (24-72)||(38160378-38160426)
[»] chr3 (62 HSPs)
chr3 (1-84)||(22721925-22722008)
chr3 (1-78)||(4238594-4238671)
chr3 (1-78)||(10297979-10298056)
chr3 (1-78)||(19557105-19557182)
chr3 (1-78)||(44785449-44785526)
chr3 (1-78)||(49823434-49823511)
chr3 (1-83)||(48340392-48340474)
chr3 (1-78)||(2787885-2787962)
chr3 (1-78)||(8437425-8437502)
chr3 (1-78)||(8817439-8817516)
chr3 (1-78)||(17653712-17653789)
chr3 (1-78)||(21295379-21295456)
chr3 (1-78)||(34080083-34080160)
chr3 (1-78)||(37508921-37508998)
chr3 (1-78)||(38964392-38964469)
chr3 (1-78)||(51406673-51406750)
chr3 (1-80)||(35513471-35513550)
chr3 (1-78)||(9111547-9111624)
chr3 (1-78)||(36095733-36095810)
chr3 (1-78)||(40691049-40691126)
chr3 (1-78)||(42507408-42507485)
chr3 (1-78)||(46208030-46208107)
chr3 (1-78)||(42170399-42170476)
chr3 (1-73)||(6013389-6013461)
chr3 (1-71)||(33942985-33943055)
chr3 (24-78)||(4238670-4238724)
chr3 (24-78)||(17653788-17653842)
chr3 (24-78)||(21295326-21295380)
chr3 (24-78)||(37508997-37509051)
chr3 (24-78)||(46208106-46208160)
chr3 (23-72)||(33128212-33128261)
chr3 (20-84)||(9213588-9213652)
chr3 (24-80)||(48340473-48340529)
chr3 (32-82)||(6013332-6013382)
chr3 (24-78)||(10298055-10298109)
chr3 (24-78)||(19557052-19557106)
chr3 (24-78)||(34080030-34080084)
chr3 (24-78)||(38964468-38964522)
chr3 (24-78)||(40690996-40691050)
chr3 (24-78)||(49823381-49823435)
chr3 (24-73)||(9111499-9111548)
chr3 (24-73)||(42507360-42507409)
chr3 (6-66)||(43323072-43323132)
chr3 (24-71)||(8817393-8817440)
chr3 (6-61)||(8951954-8952009)
chr3 (24-71)||(22722007-22722054)
chr3 (25-68)||(26001141-26001184)
chr3 (10-80)||(2131734-2131804)
chr3 (24-78)||(2787832-2787886)
chr3 (20-82)||(5323279-5323341)
chr3 (24-78)||(8437501-8437555)
chr3 (24-78)||(9027142-9027196)
chr3 (24-78)||(44785396-44785450)
chr3 (24-78)||(51406749-51406803)
chr3 (17-78)||(9213516-9213577)
chr3 (24-68)||(42170356-42170400)
chr3 (24-66)||(1262279-1262321)
chr3 (1-71)||(8092595-8092665)
chr3 (24-66)||(33942944-33942986)
chr3 (24-86)||(34988151-34988213)
chr3 (46-82)||(21653339-21653375)
chr3 (24-85)||(55249923-55249986)
[»] scaffold0482 (2 HSPs)
scaffold0482 (1-78)||(12860-12937)
scaffold0482 (24-78)||(12936-12990)
[»] scaffold0009 (2 HSPs)
scaffold0009 (4-78)||(49505-49579)
scaffold0009 (22-79)||(49579-49636)
[»] scaffold1707 (2 HSPs)
scaffold1707 (1-78)||(1335-1412)
scaffold1707 (24-66)||(1411-1453)
[»] scaffold0464 (2 HSPs)
scaffold0464 (1-78)||(6184-6261)
scaffold0464 (24-78)||(6131-6185)
[»] scaffold0415 (1 HSPs)
scaffold0415 (4-67)||(13782-13845)
[»] scaffold0011 (2 HSPs)
scaffold0011 (3-78)||(231358-231433)
scaffold0011 (31-78)||(231303-231350)
[»] scaffold0650 (1 HSPs)
scaffold0650 (6-78)||(43-114)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-73)||(12406-12478)


Alignment Details
Target: chr2 (Bit Score: 216; Significance: 1e-118; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 327 - 619
Target Start/End: Complemental strand, 10157730 - 10157458
Alignment:
Q  327 ctattagttgtccttattaacagggtaacaaccaaaagtaagtaacttaactgaccttttttgtttgtttgttacaaaacgaaagtttctattaaccttt 426  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10157730 ctattagttgtccttattaacaaggtaacaaccaaaagtaagtaacttaactgaccttttttgtttgtttgttacaaaacgaaagtttctattaaccttt 10157631  T
Q  427 ctattttttccgtttgagatttgtctaattacccgttttctagcaaaatttcaaaactcttagtaagattgcaatgtccattgcaacatcatcatagtag 526  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  10157630 ctattttttccgtttgagatttgtctaattacccgttttctagcaaaatttcaaaaatcttagtaagattgcaatgtccattgcaacatcatcataatag 10157531  T
Q  527 aagaaagtttcatatgataatattatcatgtacaataccatgccaatgtttggtttgacgttcaaccacttttattcgcgtttgacaactctt 619  Q
    ||||||||||||||||||||||||||                    |||||||||||||||||||||||||||||||||||||||||||||||    
T  10157530 aagaaagtttcatatgataatattat--------------------tgtttggtttgacgttcaaccacttttattcgcgtttgacaactctt 10157458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 81 - 218
Target Start/End: Complemental strand, 10157948 - 10157811
Alignment:
Q  81 atattagtgaggcgggacctattgtgggttgactcgaccaattatttttggaaatagaatttccagcggaaggtgctatatttggtttggtggtagaata 180  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  10157948 atattagtgaggcgggacctactgtgggttgactcgaccaattatttttggaaatagaatttccagcggaaggtgctatatttgggttggtggtagaata 10157849  T
Q  181 tggaaaggtaatgtaagtaaaagtatttgattttatat 218  Q
    ||||||||||||||||||||||||||||||||||||||    
T  10157848 tggaaaggtaatgtaagtaaaagtatttgattttatat 10157811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 3055635 - 3055558
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  3055635 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 3055558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 4683985 - 4684062
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  4683985 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 4684062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 13197763 - 13197840
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  13197763 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 13197840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 15896919 - 15896842
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  15896919 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 15896842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 37990066 - 37990143
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  37990066 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 37990143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 41478692 - 41478769
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  41478692 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 41478769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 44397624 - 44397547
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  44397624 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 44397547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 44398763 - 44398686
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  44398763 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 44398686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 16044370 - 16044449
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaat 80  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16044370 atctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtaat 16044449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 37666663 - 37666740
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  37666663 atctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 37666740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 6648572 - 6648651
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaat 80  Q
    |||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||    
T  6648572 atctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggaggtagtaat 6648651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 13344561 - 13344484
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||    
T  13344561 atctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaatagaaccggaggtagta 13344484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 16243836 - 16243913
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||    
T  16243836 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccggagatagta 16243913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 38917575 - 38917652
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||    
T  38917575 atctagttaaaaattcagtccaaatacattcacttttattgacctaaatttatcttataaataggaccggaggtagta 38917652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 9047808 - 9047885
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||| |||||    
T  9047808 atctagttaaaaattcagtccaaatacattcactttttttgacctaaatttctcttataaatatgaccggagatagta 9047885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 12337990 - 12338067
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||| |||||||||||||    
T  12337990 atctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttttcttataaatagaaccggaggtagta 12338067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 15372303 - 15372226
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||    
T  15372303 atctcgttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggactggagggagta 15372226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 12170455 - 12170530
Alignment:
Q  4 tagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaa 79  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||| |||||| |||||    
T  12170455 tagttaaaaattcagtccaaatacattaacttttattgacctaattttctcttgtaaataggatcggagggagtaa 12170530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 30099235 - 30099310
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtag 76  Q
    ||||| ||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||| |||||||||    
T  30099235 atctaattaaaaattcaatccaaatacattcatttttgttgacctaaatttctcttataaataggatcggaggtag 30099310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 41492949 - 41493015
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggac 67  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  41492949 atctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttcttttataaataggac 41493015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 31150730 - 31150659
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggag 72  Q
    ||||||||||||||| ||||||||||||| |||||||||||||  || |||||||||||||||||| |||||    
T  31150730 atctagttaaaaatttagtccaaatacataaacttttgttgacgcaactttctcttataaataggatcggag 31150659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 41492950 - 41492896
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||| ||||    
T  41492950 atacatcaacttttgttgacccaaatttctcttataaataggaccggagggagta 41492896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 12337991 - 12337934
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaata 81  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  12337991 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaata 12337934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 15896918 - 15896974
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaat 80  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  15896918 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaat 15896974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 15372302 - 15372357
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaa 79  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  15372302 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaa 15372357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 3055634 - 3055688
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  3055634 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 3055688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 6648573 - 6648519
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  6648573 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6648519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 9047809 - 9047755
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  9047809 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 9047755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 13197764 - 13197710
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  13197764 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 13197710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 13724160 - 13724102
Alignment:
Q  20 ccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||| |||||||||||||||| || |||||| |||||||||||||||| ||||    
T  13724160 ccaaatacatcaacttttgttgacctagatgtctcttgtaaataggaccggagggagta 13724102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 37990067 - 37990013
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  37990067 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 37990013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 38917576 - 38917522
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  38917576 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 38917522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 41478693 - 41478639
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  41478693 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 41478639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 44398762 - 44398816
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  44398762 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 44398816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 16734855 - 16734802
Alignment:
Q  6 gttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttata 59  Q
    ||||||||||||||||| |||||| |||||||||||||| || |||||||||||    
T  16734855 gttaaaaattcagtccagatacatcaacttttgttgaccaaactttctcttata 16734802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 41453131 - 41453090
Alignment:
Q  6 gttaaaaattcagtccaaatacattaacttttgttgacctaa 47  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  41453131 gttaaaaattcagtccaaatacattaacttttattgacctaa 41453090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 44804631 - 44804680
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatt 50  Q
    |||||||||||||||||||||||||||||| | || ||||||||||||||    
T  44804631 atctagttaaaaattcagtccaaatacattcatttatgttgacctaaatt 44804680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 16243837 - 16243790
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccgga 71  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||||||    
T  16243837 atacatcaacttttgttgacccaaaattctcttataaataggaccgga 16243790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 23227344 - 23227391
Alignment:
Q  20 ccaaatacattaacttttgttgacctaaatttctcttataaataggac 67  Q
    |||||||||| |||||||||||||| |||| |||||||||||||||||    
T  23227344 ccaaatacatcaacttttgttgaccaaaatgtctcttataaataggac 23227391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 13344560 - 13344614
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||| | ||| |||||||||||||||||||||||| ||||    
T  13344560 atacatcaacttttgttgatccaaaattctcttataaataggaccggagggagta 13344614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 16044371 - 16044317
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||| ||||||| ||| |||||||||||||||||||||||| ||||    
T  16044371 atacatcaactttagttgacccaaaattctcttataaataggaccggagggagta 16044317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 30099236 - 30099182
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||| ||||||||||||||||| ||||    
T  30099236 atacatcaacttttgttgacccaaaattctctaataaataggaccggagggagta 30099182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 37666664 - 37666610
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||| ||||||| ||| |||||||||||||||||||||||| ||||    
T  37666664 atacatcaactttagttgacccaaaattctcttataaataggaccggagggagta 37666610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 44397623 - 44397669
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccgg 70  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||    
T  44397623 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 44397669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 30852682 - 30852747
Alignment:
Q  13 attcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||| | |||||| ||||||| || | |||| ||||||||||||||||||||||||| ||||    
T  30852682 attcagtctagatacataaacttttattaatctaactttctcttataaataggaccggagggagta 30852747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 44804632 - 44804583
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggagg 73  Q
    |||||| |||||||||| || |||| ||||||||||||||||||||||||    
T  44804632 atacatcaacttttgttaacttaaaattctcttataaataggaccggagg 44804583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 4553069 - 4553125
Alignment:
Q  7 ttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaata 63  Q
    ||||||||||| |||||||||||  | ||||||||||| || |||||||||||||||    
T  4553069 ttaaaaattcaatccaaatacatctatttttgttgaccaaactttctcttataaata 4553125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 568 - 616
Target Start/End: Complemental strand, 7783542 - 7783494
Alignment:
Q  568 gccaatgtttggtttgacgttcaaccacttttattcgcgtttgacaact 616  Q
    |||| ||||||||||||||| |||||||||||||| |||||||| ||||    
T  7783542 gccagtgtttggtttgacgtccaaccacttttatttgcgtttgagaact 7783494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 36089497 - 36089457
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaatag 64  Q
    |||| ||||||||||||||||||||| ||||||||||||||    
T  36089497 atacgttaacttttgttgacctaaatatctcttataaatag 36089457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 36688959 - 36688892
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    |||| ||| ||||||||| | | |||||| ||| |||||||||| || ||||||||||||||||||||    
T  36688959 atcttgtttaaaattcagacaagatacatcaacgtttgttgaccaaactttctcttataaataggacc 36688892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 45294395 - 45294438
Alignment:
Q  20 ccaaatacattaacttttgttgacctaaatttctcttataaata 63  Q
    |||||||| ||||||||||||||||||||||| ||||| |||||    
T  45294395 ccaaatactttaacttttgttgacctaaatttttcttaaaaata 45294438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 10069283 - 10069337
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||| | ||||| |||||| ||| |||| ||||    
T  10069283 atacattaacttttgttgacctaaatatttcttaaaaatagtaccagaggaagta 10069337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 8349468 - 8349517
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggagg 73  Q
    |||||||||||||||||| ||||||| | ||||||||||| || ||||||    
T  8349468 atacattaacttttgttggcctaaatatttcttataaatatgagcggagg 8349517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 12170455 - 12170414
Alignment:
Q  22 aaatacattaacttttgttgacctaaatttctcttataaata 63  Q
    |||||||| |||||||||||||| || |||||||||||||||    
T  12170455 aaatacatcaacttttgttgacccaagtttctcttataaata 12170414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 16734855 - 16734908
Alignment:
Q  20 ccaaatacattaacttttgttgacctaaatttctcttataaataggaccggagg 73  Q
    |||||||||| |||||||||| ||  || ||||||||||||||||||| |||||    
T  16734855 ccaaatacatcaacttttgtttactcaactttctcttataaataggactggagg 16734908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 4e-46; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 81 - 179
Target Start/End: Original strand, 29410671 - 29410769
Alignment:
Q  81 atattagtgaggcgggacctattgtgggttgactcgaccaattatttttggaaatagaatttccagcggaaggtgctatatttggtttggtggtagaat 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  29410671 atattagtgaggcgggacctattgtgggttgactcgaccaattatttttggaaatagaatttccagcggaaggtgctatatttgggttggtggtagaat 29410769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 31319452 - 31319534
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaatata 83  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31319452 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtaatata 31319534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 7240826 - 7240744
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaatata 83  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7240826 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattata 7240744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 1565782 - 1565859
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  1565782 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 1565859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 1738500 - 1738577
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  1738500 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 1738577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 23314192 - 23314269
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23314192 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 23314269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 38063966 - 38064043
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  38063966 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 38064043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 46840937 - 46840860
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  46840937 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 46840860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 9268833 - 9268751
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaatata 83  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  9268833 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccagaggtagtattata 9268751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 7482302 - 7482225
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  7482302 atctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 7482225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 28536804 - 28536881
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  28536804 atctagttaaaaattcattccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 28536881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 36583472 - 36583395
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  36583472 atctagttaaaaattaagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 36583395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 38441537 - 38441453
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaatatatt 85  Q
    ||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  38441537 atctagttaaaaattcagttcaaatacattcacttttgttgacataaatttctcttataaataggaccggaggtagtactatatt 38441453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 22285776 - 22285694
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaatata 83  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  22285776 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtattata 22285694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 94371 - 94448
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  94371 atctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagatagta 94448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 36016249 - 36016326
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  36016249 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 36016326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 4790325 - 4790248
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||| |||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||    
T  4790325 atctagttaaaaatttagtccaaatacattcatttttgttgacctaaatttttcttataaataggaccggaggtagta 4790248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 9575486 - 9575409
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||| |||||| |||||||||||||||| || ||||||||| |||||||||| |||| ||||    
T  9575486 atctagttaaaaattcagtctaaatacgttaacttttgttgacccaactttctcttacaaataggaccagagggagta 9575409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 33418453 - 33418392
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaat 62  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  33418453 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaaaaat 33418392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 40840175 - 40840243
Alignment:
Q  4 tagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggag 72  Q
    ||||||||||||||||||||||||||| | ||||||| || ||| |||||||| |||||||||||||||    
T  40840175 tagttaaaaattcagtccaaatacattgatttttgttaacttaactttctcttctaaataggaccggag 40840243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 38441536 - 38441597
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaatatatt 85  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| |||| ||||||    
T  38441536 atacatcaacttttgttgacccaaaattctcttataaataggaccggaggaagtactatatt 38441597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 46840936 - 46840992
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaat 80  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  46840936 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaat 46840992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 7240825 - 7240888
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaatatattag 87  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| |||| ||| ||||    
T  7240825 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattattttag 7240888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 1738501 - 1738447
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  1738501 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 1738447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 7482301 - 7482355
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  7482301 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 7482355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 9268832 - 9268886
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  9268832 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 9268886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 22285775 - 22285829
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  22285775 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 22285829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 23314186 - 23314137
Alignment:
Q  31 aacttttgttgacctaaatttctcttataaataggaccggaggtagtaat 80  Q
    |||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  23314186 aacttttgttgacccaaaattctcttataaataggaccggagggagtaat 23314137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 33418452 - 33418500
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggag 72  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||    
T  33418452 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 33418500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 46877666 - 46877713
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccgga 71  Q
    ||||||||||||||||||||| || ||||||||||| |||||||||||    
T  46877666 atacattaacttttgttgacccaactttctcttatatataggaccgga 46877713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 94372 - 94318
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| ||||||||||||||||| |||||| ||||    
T  94372 atacatcaacttttgttgacccaaaattctcttataaataggatcggagggagta 94318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 4790324 - 4790378
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| ||||||| |||||| ||| |||||||||||||||||||||||| ||||    
T  4790324 atacatcaacttttattgacccaaaattctcttataaataggaccggaggaagta 4790378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 31319453 - 31319399
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| ||||||||||||||| |||||||| ||||    
T  31319453 atacatcaacttttgttgacccaaaattctcttataaatagaaccggagggagta 31319399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 36016250 - 36016192
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaatat 82  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| || | ||||||||    
T  36016250 atacatcaacttttgttgacccaaaattctcttataaataggaccagatggagtaatat 36016192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 36583471 - 36583525
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| ||||||||||||||||| |||||| ||||    
T  36583471 atacatcaacttttgttgacccaaaattctcttataaataggatcggagggagta 36583525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 38063967 - 38063913
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||| ||||    
T  38063967 atacatcaacttttgttgacccaaaattctcttataaataggaccagagggagta 38063913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 40840172 - 40840126
Alignment:
Q  25 tacattaacttttgttgacctaaatttctcttataaataggaccgga 71  Q
    ||||| |||||||||||||  ||||||||||||||||||||||||||    
T  40840172 tacatcaacttttgttgacaaaaatttctcttataaataggaccgga 40840126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 7269458 - 7269535
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||| ||||||||||||||  | |||||| || ||||||||||| || ||| ||||||||||| ||||||||| ||||    
T  7269458 atctggttaaaaattcagtttagatacatcaatttttgttgacccaactttttcttataaataagaccggagggagta 7269535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 9575485 - 9575541
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaat 80  Q
    |||||| || ||||||||||| || ||||||||||||||||||||| ||| ||||||    
T  9575485 atacatcaagttttgttgaccaaactttctcttataaataggaccgaagggagtaat 9575541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 63
Target Start/End: Complemental strand, 28469535 - 28469496
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaata 63  Q
    |||||||||||||||||||||||||| ||| |||||||||    
T  28469535 atacattaacttttgttgacctaaatgtcttttataaata 28469496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 63
Target Start/End: Complemental strand, 36033280 - 36033241
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaata 63  Q
    |||||| ||||||||||||||||||||| |||||||||||    
T  36033280 atacatcaacttttgttgacctaaatttatcttataaata 36033241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 1565783 - 1565729
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| ||||||||||||||| |||| ||| ||||    
T  1565783 atacatcaacttttgttgacccaaaattctcttataaatagaaccgaagggagta 1565729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 7661152 - 7661206
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| |||| |||| ||||||||||||| |||| ||||    
T  7661152 atacatcaacttttgttgacccaaatgtctcatataaataggaccagagggagta 7661206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 28536805 - 28536751
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| ||||||| |||| | ||| |||||||||||||||||||||||| ||||    
T  28536805 atacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 28536751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 7661129 - 7661088
Alignment:
Q  25 tacattaacttttgttgacctaaatttctcttataaatagga 66  Q
    ||||| ||||||| ||||| ||||||||||||||||||||||    
T  7661129 tacatcaacttttattgacataaatttctcttataaatagga 7661088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 7269452 - 7269412
Alignment:
Q  31 aacttttgttgacctaaatttctcttataaataggaccgga 71  Q
    |||||||||| ||| || |||||||||||||||||||||||    
T  7269452 aacttttgttaacccaactttctcttataaataggaccgga 7269412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 8e-38; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 47216752 - 47216836
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaatatatt 85  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47216752 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtaatatatt 47216836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 39402019 - 39402101
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaatata 83  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  39402019 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtagtata 39402101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 1050965 - 1050880
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaatatatta 86  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1050965 atctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttctcttataaataggaccggaggtagtaatttatta 1050880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 9981724 - 9981647
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  9981724 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 9981647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 26471118 - 26471195
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  26471118 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 26471195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 27159411 - 27159488
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  27159411 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 27159488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 31842848 - 31842925
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31842848 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 31842925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 44668146 - 44668223
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  44668146 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 44668223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 44955259 - 44955338
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaat 80  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  44955259 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccggaggtagtaat 44955338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 11796010 - 11795933
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  11796010 atctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 11795933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 14984914 - 14984837
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  14984914 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagatagta 14984837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 23278054 - 23278131
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  23278054 atctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 23278131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 34042773 - 34042696
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  34042773 atctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 34042696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 47777534 - 47777611
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  47777534 atctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgggggtagta 47777611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 12483684 - 12483758
Alignment:
Q  4 tagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  12483684 tagttcaaaattcagtctaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 12483758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 47588390 - 47588467
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||    
T  47588390 atctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccagaggtagta 47588467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 17556830 - 17556752
Alignment:
Q  1 atctagttaaaaattcagtccaaatacatt-aacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||| ||||    
T  17556830 atctagttaaaaattcagtccaaatacatttaacttttgttgacctaactttctcttataaataggaccagagggagta 17556752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 47969772 - 47969700
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctc-ttataaataggaccggag 72  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  47969772 atctagttaaaaattcagtctaaatacatttacttttgttgacctaaatttctctttataaataggaccggag 47969700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 11897126 - 11897054
Alignment:
Q  6 gttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||| || |||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  11897126 gttaaaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataggaccggagggagta 11897054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 16448161 - 16448238
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||| ||| ||||||||||||| |||||| |||||||||||||| || ||||||||||||||||||||||||| ||||    
T  16448161 atctggttcaaaattcagtccagatacatcaacttttgttgacccaactttctcttataaataggaccggagggagta 16448238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 25694396 - 25694331
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaatagga 66  Q
    ||||||||||||||||| |||||||||||| |||||| |||| |||||||||||||||||||||||    
T  25694396 atctagttaaaaattcaatccaaatacattcacttttattgatctaaatttctcttataaatagga 25694331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 39402020 - 39401960
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaatatat 84  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||||||||    
T  39402020 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaatatat 39401960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 11897130 - 11897184
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||| ||||    
T  11897130 atacatcaacttttgttgacccaaatttctcttataaataggaccggagggagta 11897184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 12213530 - 12213604
Alignment:
Q  4 tagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||| || ||||||||||| ||||||||||||||  |||||||||||||| ||| ||||| ||||    
T  12213530 tagttaaaaattcaatctaaatacattaatttttgttgacctaacattctcttataaataagactggagggagta 12213604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 37552218 - 37552141
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||| ||||||||||||||||| |||||| |||| ||||||||  || ||| ||||||||||||||||||||| ||||    
T  37552218 atctggttaaaaattcagtccagatacatgaactgttgttgactcaactttatcttataaataggaccggagggagta 37552141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 12483684 - 12483628
Alignment:
Q  22 aaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  12483684 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 12483628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 31842849 - 31842793
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaat 80  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  31842849 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaat 31842793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 44955260 - 44955212
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggag 72  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||    
T  44955260 atacatcaacttttgttgacctaaaattctcttataaataggaccggag 44955212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 47777535 - 47777479
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaat 80  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  47777535 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaat 47777479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 11796009 - 11796064
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaa 79  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  11796009 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaa 11796064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 14984913 - 14984967
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  14984913 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 14984967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 17556829 - 17556883
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| || ||||||||||||||||||||||||| ||||    
T  17556829 atacatcaacttttgttgacccaagtttctcttataaataggaccggagggagta 17556883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 25694395 - 25694449
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  25694395 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 25694449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 27159412 - 27159358
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  27159412 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 27159358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 44668147 - 44668093
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  44668147 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 44668093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 9981723 - 9981772
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggagg 73  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||||||||    
T  9981723 atacatcaacttttgttgacccaaaattctcttataaataggaccggagg 9981772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 11989853 - 11989796
Alignment:
Q  6 gttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaata 63  Q
    ||||||||||||||||||||| ||||  ||||||||||| || |||||||||||||||    
T  11989853 gttaaaaattcagtccaaatatattagtttttgttgacccaactttctcttataaata 11989796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 26471119 - 26471063
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaat 80  Q
    |||||| |||||||||||| | ||| |||||||||||||||||||||||| ||||||    
T  26471119 atacatcaacttttgttgatccaaaattctcttataaataggaccggagggagtaat 26471063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 1050964 - 1051018
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||| ||||||| ||| |||||||||||||||||||||||| ||||    
T  1050964 atacatcaactttagttgacccaaaattctcttataaataggaccggagggagta 1051018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 34042772 - 34042826
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| ||||||||||||||| |||||||| ||||    
T  34042772 atacatcaacttttgttgacccaaaattctcttataaatagaaccggagggagta 34042826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 37552217 - 37552263
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccgg 70  Q
    ||||||| | ||||||||||| |||||||||||||||||||||||||    
T  37552217 atacattcatttttgttgacccaaatttctcttataaataggaccgg 37552263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 47216753 - 47216699
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| ||||||||||||||| |||||||| ||||    
T  47216753 atacatcaacttttgttgacccaaaattctcttataaatagtaccggagggagta 47216699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 5392218 - 5392267
Alignment:
Q  20 ccaaatacattaacttttgttgacctaaatttctcttataaataggaccg 69  Q
    |||||||||| ||||||| ||||||||||||||||||||| || ||||||    
T  5392218 ccaaatacatcaacttttattgacctaaatttctcttatatattggaccg 5392267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 11989853 - 11989914
Alignment:
Q  20 ccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaata 81  Q
    |||||||||| || |||| |||||  |||||||| ||||||||||||||||||| |||||||    
T  11989853 ccaaatacatcaatttttattgactcaaatttcttttataaataggaccggagggagtaata 11989914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 12062635 - 12062679
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    ||||||||| |||||||||  ||||||||||||||||||||||||    
T  12062635 atacattaatttttgttgatttaaatttctcttataaataggacc 12062679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 19391948 - 19392004
Alignment:
Q  22 aaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||| ||  || ||||||||||| ||||||| ||||||||||    
T  19391948 aaatacattaacttttgttcactcaactttctcttatatataggactggaggtagta 19392004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 12043679 - 12043726
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccgga 71  Q
    ||||||||| |||||||||  ||||||| |||||||||||||||||||    
T  12043679 atacattaatttttgttgatttaaatttttcttataaataggaccgga 12043726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 12043661 - 12043616
Alignment:
Q  21 caaatacattaacttttgttgacctaaatttctcttataaatagga 66  Q
    ||||||||| ||||||||||||| ||||| ||| ||||||||||||    
T  12043661 caaatacatcaacttttgttgacttaaatatcttttataaatagga 12043616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 78
Target Start/End: Original strand, 47678371 - 47678404
Alignment:
Q  45 taaatttctcttataaataggaccggaggtagta 78  Q
    ||||||| ||||||||||||||||||||||||||    
T  47678371 taaatttttcttataaataggaccggaggtagta 47678404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 42 - 78
Target Start/End: Original strand, 39720779 - 39720815
Alignment:
Q  42 acctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| | ||||||||||||||||||||||||||||    
T  39720779 acctaattgtctcttataaataggaccggaggtagta 39720815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 3e-37; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 6552732 - 6552649
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaatatat 84  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6552732 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtaatatat 6552649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 12343193 - 12343271
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaa 79  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12343193 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtaa 12343271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 54665 - 54742
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  54665 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 54742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 2890215 - 2890292
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  2890215 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 2890292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 3304331 - 3304408
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  3304331 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 3304408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 7785831 - 7785908
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  7785831 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 7785908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 7805752 - 7805829
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  7805752 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 7805829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 32114528 - 32114605
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  32114528 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 32114605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 43199407 - 43199484
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  43199407 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 43199484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 44498240 - 44498317
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  44498240 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 44498317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 39571256 - 39571335
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaat 80  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  39571256 atctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggaggtagtaat 39571335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 12763707 - 12763784
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  12763707 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 12763784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 15888405 - 15888482
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  15888405 atctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 15888482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 25601053 - 25601130
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  25601053 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagta 25601130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 31654690 - 31654613
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  31654690 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 31654613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 32211416 - 32211493
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  32211416 atctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 32211493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 7012248 - 7012171
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  7012248 atctagttaaaaattcagtccaaatatattcacttttgttgatctaaatttctcttataaataggaccggaggtagta 7012171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 33289314 - 33289391
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||    
T  33289314 atctagttaaaaattcagtccaaatacattcacttatgttgatctaaatttctcttataaataggaccggaggtagta 33289391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 4245649 - 4245711
Alignment:
Q  16 cagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  4245649 cagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 4245711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 13578934 - 13578857
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||| || ||||||||||    
T  13578934 atctagttaaaaattcagttcaaatacattcacttttattgacctaaatttctcttataaatagaactggaggtagta 13578857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 28463688 - 28463614
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggta 75  Q
    |||| ||| |||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||    
T  28463688 atctggttcaaaattcagtccaaatacatcaacttttgttgacccaactttctcttataaataggaccggaggta 28463614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 8587247 - 8587170
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||| |||| |||||||| |||||||||||||| || ||||||||||||||||||||||||| ||||    
T  8587247 atctagttaaaaatttagtcaaaatacatcaacttttgttgaccaaactttctcttataaataggaccggagggagta 8587170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 25601054 - 25601000
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  25601054 atacattaacttttgttgacccaaaattctcttataaataggaccggagggagta 25601000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 54666 - 54612
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  54666 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 54612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 2890216 - 2890162
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  2890216 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 2890162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 6552731 - 6552785
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  6552731 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6552785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 7785832 - 7785778
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  7785832 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 7785778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 17006982 - 17006916
Alignment:
Q  7 ttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggagg 73  Q
    |||| ||||||||||| || ||| |||||||||||||| || |||||||||||||||||| ||||||    
T  17006982 ttaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaataggatcggagg 17006916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 17570265 - 17570331
Alignment:
Q  7 ttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggagg 73  Q
    |||| ||||||||||| || ||| |||||||||||||| || |||||||||||||||||| ||||||    
T  17570265 ttaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaataggatcggagg 17570331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 33289315 - 33289261
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  33289315 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 33289261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 39571257 - 39571203
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  39571257 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 39571203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 43199408 - 43199354
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  43199408 atacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagta 43199354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 3304332 - 3304271
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaatatatt 85  Q
    |||||| |||||||||||||| ||| || ||||||||||||||||||||| |||| ||||||    
T  3304332 atacatcaacttttgttgacccaaaattttcttataaataggaccggagggagtagtatatt 3304271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 12343194 - 12343146
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggag 72  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||    
T  12343194 atacatcaacttttgttgaccaaaaattctcttataaataggaccggag 12343146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 24692040 - 24692096
Alignment:
Q  10 aaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaatagga 66  Q
    |||||||||| || |||||| ||||||||||||||||| ||| ||||||||||||||    
T  24692040 aaaattcagttcagatacatcaacttttgttgacctaactttttcttataaatagga 24692096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 31654689 - 31654745
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaat 80  Q
    |||||| |||||||||||||| ||| |||| ||||||||||||||||||| ||||||    
T  31654689 atacatcaacttttgttgacccaaaattcttttataaataggaccggaggaagtaat 31654745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 27422267 - 27422193
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||| |||||||||||||||||||||||| ||   ||||||||  || ||| ||||||||||||||||||||| ||||    
T  27422267 atctggttaaaaattcagtccaaatacatgaa---ttgttgactcaactttatcttataaataggaccggaggaagta 27422193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 44498241 - 44498182
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaatata 83  Q
    |||||| ||||||| |||||| ||| |||||||||||||||||||||||| |||| ||||    
T  44498241 atacatcaacttttattgacccaaaattctcttataaataggaccggagggagtattata 44498182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 7012247 - 7012301
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||| | ||| |||||||||||||||||||||||| ||||    
T  7012247 atacatcaacttttgttgatccaaaattctcttataaataggaccggaggaagta 7012301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 7805753 - 7805699
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||| ||||| ||| |||||||||||||||||||||||| ||||    
T  7805753 atacatcaacttttgctgacccaaaattctcttataaataggaccggagggagta 7805699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 12763708 - 12763654
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| || ||||||||||||||||||||| ||||    
T  12763708 atacatcaacttttgttgacccaaaattatcttataaataggaccggagggagta 12763654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 27422266 - 27422320
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||| | ||||||||||| |||||||||||||||||||||||| ||| ||||    
T  27422266 atacattcatttttgttgacccaaatttctcttataaataggaccgaagggagta 27422320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 32211417 - 32211363
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| || ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  32211417 atacatcaatttttgttgacccaaaattctcttataaataggaccggagggagta 32211363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 28999104 - 28999163
Alignment:
Q  4 tagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaata 63  Q
    ||||||||||||||||| | |||||| || ||||||||||| || ||||| |||||||||    
T  28999104 tagttaaaaattcagtctagatacatcaatttttgttgaccaaactttcttttataaata 28999163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 13246851 - 13246801
Alignment:
Q  21 caaatacattaacttttgttgacctaaatttctcttataaataggaccgga 71  Q
    |||||||||| | ||||||||| | ||||||||||||||||||||| ||||    
T  13246851 caaatacattcatttttgttgatccaaatttctcttataaataggatcgga 13246801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 15688084 - 15688038
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccgg 70  Q
    |||||| |||||||||||||| || ||||||||||||| ||||||||    
T  15688084 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 15688038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 15888406 - 15888352
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| ||||||||||||||| || ||||| ||||    
T  15888406 atacatcaacttttgttgacccaaaattctcttataaatagaactggagggagta 15888352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 32114529 - 32114475
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| || ||||||||||| ||| || ||||||||||||||||||||| ||||    
T  32114529 atacatcaatttttgttgacccaaaattttcttataaataggaccggagggagta 32114475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 78
Target Start/End: Complemental strand, 6899452 - 6899419
Alignment:
Q  45 taaatttctcttataaataggaccggaggtagta 78  Q
    ||||||| ||||||||||||||||||||||||||    
T  6899452 taaatttttcttataaataggaccggaggtagta 6899419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 30171540 - 30171487
Alignment:
Q  20 ccaaatacattaacttttgttgacctaaatttctcttataaataggaccggagg 73  Q
    |||| |||||||||||||||||||  ||| ||||||| ||||||||| ||||||    
T  30171540 ccaagtacattaacttttgttgactcaaaattctcttgtaaataggatcggagg 30171487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 568 - 620
Target Start/End: Complemental strand, 14372984 - 14372932
Alignment:
Q  568 gccaatgtttggtttgacgttcaaccacttttattcgcgtttgacaactcttc 620  Q
    |||| ||||||||||| ||| |||||||||||| ||| |||||| ||||||||    
T  14372984 gccagtgtttggtttggcgtccaaccacttttactcgtgtttgagaactcttc 14372932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 24692026 - 24691986
Alignment:
Q  31 aacttttgttgacctaaatttctcttataaataggaccgga 71  Q
    |||||||||||||| |||||||| ||| |||||||||||||    
T  24692026 aacttttgttgacccaaatttcttttaaaaataggaccgga 24691986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 46 - 82
Target Start/End: Original strand, 34157778 - 34157814
Alignment:
Q  46 aaatttctcttataaataggaccggaggtagtaatat 82  Q
    ||||||||||| |||||||||||||||| ||||||||    
T  34157778 aaatttctcttgtaaataggaccggagggagtaatat 34157814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 5e-36; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 9395427 - 9395346
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaatat 82  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9395427 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtaatat 9395346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 37149008 - 37149085
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  37149008 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 37149085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 11795245 - 11795167
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaa 79  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11795245 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagtaa 11795167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 26350403 - 26350489
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaatatattag 87  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||    
T  26350403 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggagggagtactatattag 26350489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 583066 - 582989
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  583066 atctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaataggaccggaggtagta 582989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 20848151 - 20848074
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  20848151 atctagttaaaaattcagtccaaatacattcacttttattgacctaaatttctcttataaataggaccggaggtagta 20848074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 23360019 - 23359942
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  23360019 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccagaggtagta 23359942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 36563591 - 36563668
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  36563591 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagta 36563668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 41989460 - 41989537
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  41989460 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaataggaccggaggtagta 41989537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 13033128 - 13033051
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  13033128 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggaagta 13033051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 13103101 - 13103024
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  13103101 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggaagta 13103024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 17025701 - 17025624
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||  ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  17025701 atctagttaaaaattcagtttaaatacattcacttttgtggacctaaatttctcttataaataggaccggaggtagta 17025624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 37642031 - 37641953
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttg-ttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||| ||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||    
T  37642031 atctagttaaaaattcagtccacatacattcactttttattgacctaaatttctcttataaataggaccggaggtagta 37641953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 4444037 - 4443960
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||    
T  4444037 atctatttaaaaattcagtctaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggaagta 4443960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 38361744 - 38361821
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||| |||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||| |||||| ||||    
T  38361744 atctatttaaaaattcagtccaaatacattcacttttattgacctaaatttatcttataaataggatcggaggaagta 38361821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21576023 - 21575970
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctc 54  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  21576023 atctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 21575970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 23360018 - 23360079
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaatatatt 85  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||||||||| |||||    
T  23360018 atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtaaaatatt 23360079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 13539920 - 13539986
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccgga 71  Q
    |||||||||||||||||||| ||||  |||    |||||||||||||||||||||||||||||||||||||    
T  13539920 atctagttaaaaattcagtctaaatttatt----tttgttgacctaaatttctcttataaataggaccgga 13539986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 6126901 - 6126845
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctctta 57  Q
    ||||||||||||||| |||||||||||||| | ||||||||| ||||||||||||||    
T  6126901 atctagttaaaaatttagtccaaatacattcatttttgttgatctaaatttctctta 6126845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 6126900 - 6126954
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  6126900 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6126954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 9395426 - 9395480
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  9395426 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 9395480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 13103100 - 13103154
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  13103100 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 13103154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 17025700 - 17025754
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  17025700 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 17025754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 36563592 - 36563538
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  36563592 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 36563538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 41989461 - 41989407
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  41989461 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 41989407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 37149009 - 37148952
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaata 81  Q
    |||||| |||||||||||||| ||| |||| ||||||||||||||||||| |||||||    
T  37149009 atacatcaacttttgttgacccaaaattctattataaataggaccggagggagtaata 37148952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 2629620 - 2629674
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||| | ||||||||| | ||||||||| ||||    
T  2629620 atacattaacttttgttgacctaaatatttcttataaacaagaccggaggaagta 2629674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 11574166 - 11574204
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggaccggag 72  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  11574166 ttttgttgacctaaatgtctcttataaataggaccggag 11574204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 11795244 - 11795298
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||| ||||| ||||    
T  11795244 atacatcaacttttgttgacccaaaattctcttataaataggactggagggagta 11795298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 13033127 - 13033181
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| ||||||||||||||||| |||||| ||||    
T  13033127 atacatcaacttttgttgacccaaaattctcttataaataggatcggagggagta 13033181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 21576022 - 21576076
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||| | ||| |||||||||||||||||||||||| ||||    
T  21576022 atacatcaacttttgttgatccaaaattctcttataaataggaccggagggagta 21576076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 37642030 - 37642084
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| ||||||| |||||| ||| |||||||||||||||||||||||| ||||    
T  37642030 atacatcaacttttattgacccaaaattctcttataaataggaccggagggagta 37642084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 39290851 - 39290774
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaa 79  Q
    ||||| ||||||||| | ||||||||||| || |||||||||||| |  ||||||||| |||||||||||||| |||||    
T  39290851 atctaattaaaaatttaatccaaatacatcaatttttgttgacctgatattctcttat-aataggaccggagggagtaa 39290774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 3549602 - 3549553
Alignment:
Q  23 aatacattaacttttgttgacctaaatttctcttataaataggaccggag 72  Q
    ||||||| |||||||||| |  ||||||||||||||||||||||||||||    
T  3549602 aatacatcaacttttgttaatataaatttctcttataaataggaccggag 3549553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 4444036 - 4444085
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggagg 73  Q
    |||||| |||||||||||| ||||| |||||||||||||| |||||||||    
T  4444036 atacatcaacttttgttgatctaaaattctcttataaataagaccggagg 4444085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 27081014 - 27081063
Alignment:
Q  22 aaatacattaacttttgttgacctaaatttctcttataaataggaccgga 71  Q
    |||||||| ||||||||||||||||||| |||||| ||||||||| ||||    
T  27081014 aaatacatcaacttttgttgacctaaatgtctcttgtaaataggatcgga 27081063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 2366396 - 2366352
Alignment:
Q  20 ccaaatacattaacttttgttgacctaaatttctcttataaatag 64  Q
    |||||||||| |||| ||||||||| |||||||||||||||||||    
T  2366396 ccaaatacatgaactcttgttgacccaaatttctcttataaatag 2366352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 3549605 - 3549663
Alignment:
Q  6 gttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaatag 64  Q
    |||||||||| || ||| ||||||||| ||||||||||  |||| ||||||||||||||    
T  3549605 gttaaaaatttagaccagatacattaatttttgttgactaaaatatctcttataaatag 3549663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 13284695 - 13284757
Alignment:
Q  7 ttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccg 69  Q
    ||||||||| || |||||||||| |||||||| |  ||||||| ||| |||||||||||||||    
T  13284695 ttaaaaatttagaccaaatacataaacttttgatagcctaaatatctattataaataggaccg 13284757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 36595828 - 36595782
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccgg 70  Q
    |||||| || |||||||||||||| ||||||||||||||| ||||||    
T  36595828 atacatcaatttttgttgacctaactttctcttataaataagaccgg 36595782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 966224 - 966273
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggagg 73  Q
    ||||||| | ||||||||| | |||||||||||||||||||||| |||||    
T  966224 atacattcatttttgttgatccaaatttctcttataaataggactggagg 966273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 35904473 - 35904440
Alignment:
Q  4 tagttaaaaattcagtccaaatacattaactttt 37  Q
    |||||||||||||||||||||||||| |||||||    
T  35904473 tagttaaaaattcagtccaaatacatcaactttt 35904440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 966225 - 966157
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccg 69  Q
    |||| ||||||||||||||| | |||||| |||| |||||||   || |||||||| ||||||||||||    
T  966225 atctggttaaaaattcagtcaagatacatgaactgttgttgattcaactttctcttgtaaataggaccg 966157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 11574086 - 11574046
Alignment:
Q  31 aacttttgttgacctaaatttctcttataaataggaccgga 71  Q
    ||||||| ||||||||||||| |||| ||||||||||||||    
T  11574086 aacttttattgacctaaatttttcttgtaaataggaccgga 11574046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 20848150 - 20848205
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaat 80  Q
    |||||| || |||||||| || ||||| |||||||||||||||||||||| ||||||    
T  20848150 atacatcaatttttgttgcccaaaatt-ctcttataaataggaccggagggagtaat 20848205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 2e-35; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 26602400 - 26602320
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaata 81  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26602400 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtaata 26602320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 2830412 - 2830335
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  2830412 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 2830335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 6330192 - 6330115
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  6330192 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 6330115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 8383022 - 8383099
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  8383022 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 8383099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 11572198 - 11572275
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  11572198 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 11572275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 33052847 - 33052924
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  33052847 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 33052924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 8099607 - 8099530
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  8099607 atctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 8099530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 9644773 - 9644692
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaatat 82  Q
    |||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||    
T  9644773 atctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggaggtagtaatat 9644692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 9650790 - 9650709
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaatat 82  Q
    |||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||    
T  9650790 atctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggaggtagtaatat 9650709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 13853646 - 13853723
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  13853646 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggtagta 13853723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 35031054 - 35031131
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  35031054 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccggaggtagta 35031131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 6143631 - 6143554
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  6143631 atctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagta 6143554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 6068643 - 6068561
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaatata 83  Q
    ||||||||||||||||| |||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||| ||||    
T  6068643 atctagttaaaaattcaatccaaatacattcacttttattgacctaaatttttcttataaataggaccggaggtagtattata 6068561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 13043835 - 13043750
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaatatatta 86  Q
    ||||||||||||||||| | |||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  13043835 atctagttaaaaattcaattcaaatacattcatttttgttgacctaaatttctcttataaatagaaccggaggtagtaataaatta 13043750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 8417846 - 8417923
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||| |||| ||||    
T  8417846 atctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataagaccagagggagta 8417923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 6068997 - 6069062
Alignment:
Q  5 agttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccgg 70  Q
    ||||||||||| || |||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  6068997 agttaaaaatttagaccaaatacattaacttttgttgacctaaatatcttttataaataggaccgg 6069062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 28747187 - 28747248
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaat 62  Q
    ||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  28747187 atctaattaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaat 28747248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 3788111 - 3788167
Alignment:
Q  22 aaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||| ||||||||||||||||||||| ||||||||||| ||||||||| ||||    
T  3788111 aaatacatcaacttttgttgacctaaatttatcttataaataagaccggagggagta 3788167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 8383023 - 8382964
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaatata 83  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| |||| ||||    
T  8383023 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtagtata 8382964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 2830411 - 2830465
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  2830411 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 2830465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 6330191 - 6330245
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  6330191 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6330245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 6549940 - 6549902
Alignment:
Q  21 caaatacattaacttttgttgacctaaatttctcttata 59  Q
    |||||||||||||||||||||||||||||||||||||||    
T  6549940 caaatacattaacttttgttgacctaaatttctcttata 6549902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 8099606 - 8099660
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  8099606 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 8099660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 9644772 - 9644826
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  9644772 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 9644826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 9650789 - 9650843
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  9650789 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 9650843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 11572199 - 11572145
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  11572199 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 11572145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 13853647 - 13853593
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  13853647 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 13853593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 26602399 - 26602453
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  26602399 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 26602453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 22896539 - 22896471
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||         |||||||||||| |||||||||||||||||||||||| ||||    
T  22896539 atctagttaaaaattcagtccaaatac---------tgttgacctaaacttctcttataaataggaccggagggagta 22896471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 14936510 - 14936582
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggagg 73  Q
    |||||||||| ||||   ||||||||||| |||| ||||||||| |||| |||||||||||||||||| ||||    
T  14936510 atctagttaagaatttgttccaaatacatcaactattgttgacccaaatatctcttataaataggaccagagg 14936582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 8417847 - 8417792
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaa 79  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||| ||| |||||    
T  8417847 atacatcaacttttgttgacccaaaattctcttataaataggaccgaagggagtaa 8417792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 17992065 - 17992018
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaa 48  Q
    ||||||||||||||||| |||||||||||| |||||| ||||||||||    
T  17992065 atctagttaaaaattcaatccaaatacattcacttttattgacctaaa 17992018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 6068642 - 6068696
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||  ||| |||||||||||||||||||||||| ||||    
T  6068642 atacatcaacttttgttgactcaaaattctcttataaataggaccggagggagta 6068696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 35031055 - 35031001
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| || ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  35031055 atacatcaatttttgttgacccaaaattctcttataaataggaccggaggaagta 35031001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 28747188 - 28747145
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggac 67  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||    
T  28747188 atacatcaacttttgttgacccaaaattctcttataaataggac 28747145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 32045157 - 32045212
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaa 79  Q
    |||||||||||||||||||  ||||| ||| |||||||||||| |||||| |||||    
T  32045157 atacattaacttttgttgagttaaatatcttttataaataggatcggagggagtaa 32045212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 33052848 - 33052801
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccgga 71  Q
    |||||| ||||||| |||||| ||| ||||||||||||||||||||||    
T  33052848 atacatcaacttttattgacccaaaattctcttataaataggaccgga 33052801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 8186443 - 8186489
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccgg 70  Q
    |||||| |||||||||||| | |||||||| ||||||||||||||||    
T  8186443 atacatcaacttttgttgatccaaatttcttttataaataggaccgg 8186489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 22896538 - 22896584
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccgg 70  Q
    |||||| |||||||||||||  ||| |||||||||||||||||||||    
T  22896538 atacatcaacttttgttgacaaaaaattctcttataaataggaccgg 22896584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 31849636 - 31849586
Alignment:
Q  22 aaatacattaacttttgttgacctaaatttctcttataaataggaccggag 72  Q
    |||||||| |||||||||||||| | || ||||||||||||| ||||||||    
T  31849636 aaatacatcaacttttgttgacccatatgtctcttataaatatgaccggag 31849586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 12473684 - 12473651
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggac 67  Q
    |||| |||||||||||||||||||||||||||||    
T  12473684 ttttattgacctaaatttctcttataaataggac 12473651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 17992074 - 17992119
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggaccggaggtagtaa 79  Q
    ||||||||||| ||| |||||||||||||||||||| ||| |||||    
T  17992074 ttttgttgacccaaaattctcttataaataggaccgaagggagtaa 17992119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 76; Significance: 8e-35; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 23862 - 23779
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaatatat 84  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23862 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattatat 23779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 23861 - 23915
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| || ||||||||||||||||||||| ||||    
T  23861 atacatcaacttttgttgacccaaaattttcttataaataggaccggagggagta 23915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 8e-35; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 48336340 - 48336257
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaatatat 84  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  48336340 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattatat 48336257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 24704447 - 24704369
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaa 79  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24704447 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtaa 24704369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 53337447 - 53337369
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaa 79  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  53337447 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtaa 53337369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 3372198 - 3372121
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  3372198 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 3372121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 20538739 - 20538816
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  20538739 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 20538816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 47833688 - 47833611
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  47833688 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 47833611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 6121946 - 6122025
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaat 80  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  6121946 atctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggaggtagtaat 6122025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 3993053 - 3992976
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  3993053 atctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttctcttataaataggaccggaggtagta 3992976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 26231654 - 26231577
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  26231654 atctagttaaaaattcagtccaaatacattcgcttttgttgacctaaatttctcttataaataggaccggaggtagta 26231577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 33551278 - 33551201
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  33551278 atctagttaaaaattcagtcaaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 33551201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 42797809 - 42797732
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  42797809 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttatatataggaccggaggtagta 42797732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 43900626 - 43900549
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  43900626 atctagttaaaaattcagtccaaatacatttacttttgttgacctaaatttctcttataaataggaccggagggagta 43900549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 46797802 - 46797725
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  46797802 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagaaccggaggtagta 46797725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 52756752 - 52756671
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaatat 82  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  52756752 atctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaataggaccggagatagtaatat 52756671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 3904739 - 3904813
Alignment:
Q  4 tagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  3904739 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttcttttataaataggaccggaggtagta 3904813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 7579387 - 7579310
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  7579387 atctagttaaaaattcaatccaaatacattcacttttgttaacctaaatttctcttataaataggaccggaggtagta 7579310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 47838670 - 47838747
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||    
T  47838670 atctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttctcttataaataggatcggaggtagta 47838747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 51894635 - 51894720
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaatatatta 86  Q
    |||| ||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  51894635 atctggttaaaaattcagtccaaaaacattcacttttgttgacctaaatttttcttataaataggaccggaggtagtattatatta 51894720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 5986950 - 5986870
Alignment:
Q  4 tagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaatatat 84  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| | |||||||||||||||||    
T  5986950 tagttaaaaattcagtccaaatacattcacttttgttgacctatatttctcttataaatagaatcggaggtagtaatatat 5986870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 33621873 - 33621796
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| | ||||||    
T  33621873 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagaaccgaaagtagta 33621796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 40913246 - 40913319
Alignment:
Q  5 agttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||    
T  40913246 agttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggagggagta 40913319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 41469819 - 41469896
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||| ||||    
T  41469819 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttcttttataaataggaccgaaggaagta 41469896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 41615732 - 41615794
Alignment:
Q  4 tagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaatagga 66  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41615732 tagttaaaaattaagtccaaatacattaacttttgttgacctaattttctcttataaatagga 41615794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 3422137 - 3422073
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaatagga 66  Q
    ||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||    
T  3422137 atctagttaaaaattcagttcaaatacattca-ttttgttgacctaaatttctcttataaatagga 3422073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 25855155 - 25855083
Alignment:
Q  6 gttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||  || ||||||| |||||||||||| |||| ||||    
T  25855155 gttaaaaattcagtccaaatacattaacttttgttgactcaactttctctcataaataggacctgagggagta 25855083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 29845719 - 29845656
Alignment:
Q  4 tagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggac 67  Q
    |||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||| ||||||    
T  29845719 tagttaaaaattcagttcaaatatattaatttttgttgacctaaatttctcttataagtaggac 29845656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 4780371 - 4780425
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  4780371 atacattaacttttgttgaccaaaatttctcttataaataggaccggagggagta 4780425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 17236845 - 17236912
Alignment:
Q  6 gttaaaaattcagtccaaa-tacattaacttttgttgacctaaatttctcttataaataggaccggag 72  Q
    ||||||||||||||| ||| ||||| |||||||||||||| |||||| ||||||||||||||||||||    
T  17236845 gttaaaaattcagtctaaaatacatcaacttttgttgacccaaatttttcttataaataggaccggag 17236912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 42797808 - 42797863
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaa 79  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||| |||||    
T  42797808 atacatcaacttttgttgacctaaaattctcttataaataggaccggagggagtaa 42797863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 51894636 - 51894578
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaatat 82  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||||||    
T  51894636 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaatat 51894578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 3422136 - 3422190
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  3422136 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 3422190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 5986950 - 5987000
Alignment:
Q  22 aaatacattaacttttgttgacctaaatttctcttataaataggaccggag 72  Q
    |||||||| |||||||||||||| ||| |||||||||||||||||||||||    
T  5986950 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggag 5987000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 6121947 - 6121893
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  6121947 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6121893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 24704446 - 24704500
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||| ||| ||||||||||||||||| |||||| ||||    
T  24704446 atacattaacttttgttgacccaaaattctcttataaataggatcggagggagta 24704500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 41469820 - 41469766
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  41469820 atacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagta 41469766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 47833687 - 47833741
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  47833687 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 47833741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 47838671 - 47838617
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  47838671 atacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagta 47838617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 50430471 - 50430533
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaata 63  Q
    |||| |||||||||||| ||||||||||| |||||||||||||| || || ||||||||||||    
T  50430471 atctggttaaaaattcaatccaaatacatcaacttttgttgacccaacttgctcttataaata 50430533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 17344284 - 17344219
Alignment:
Q  7 ttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggag 72  Q
    ||||||||||||| || |||||| ||||||||||||  ||| |||||||||||||||| |||||||    
T  17344284 ttaaaaattcagttcagatacatcaacttttgttgatttaactttctcttataaatagaaccggag 17344219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 20538740 - 20538683
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaata 81  Q
    |||||| || ||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  20538740 atacatcaaattttgttgacccaaaattctcttataaataggaccggagggagtaata 20538683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 3904739 - 3904683
Alignment:
Q  22 aaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||| || ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  3904739 aaatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagta 3904683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 43900625 - 43900680
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaa 79  Q
    |||||| |||||||||| ||| ||| |||||||||||||||||||||||| |||||    
T  43900625 atacatcaacttttgttaacccaaaattctcttataaataggaccggaggaagtaa 43900680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 31 - 78
Target Start/End: Original strand, 46797808 - 46797855
Alignment:
Q  31 aacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  46797808 aacttttgttgacccaaaattctcttataaataggaccggagggagta 46797855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 3372197 - 3372251
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| || ||||||||||||||||||||| ||||    
T  3372197 atacatcaacttttgttgacccaaaattatcttataaataggaccggagggagta 3372251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 3993052 - 3993106
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||| ||||||||| ||||    
T  3993052 atacatcaacttttgttgacccaaaattctcttataaataagaccggagggagta 3993106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 7579386 - 7579440
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| ||||||||||||||| |||||||| ||||    
T  7579386 atacatcaacttttgttgacccaaaattctcttataaatagaaccggaggaagta 7579440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 33621872 - 33621926
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| || ||||||||||||||||||||| ||||    
T  33621872 atacatcaacttttgttgacccaaaattatcttataaataggaccggagggagta 33621926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 40913236 - 40913194
Alignment:
Q  31 aacttttgttgacctaaatttctcttataaataggaccggagg 73  Q
    |||||||||||| | ||||||||||||||||||||||||||||    
T  40913236 aacttttgttgatccaaatttctcttataaataggaccggagg 40913194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 48336339 - 48336393
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| || ||||||||||||||||||||| ||||    
T  48336339 atacatcaacttttgttgacccaaaattttcttataaataggaccggagggagta 48336393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 53337446 - 53337500
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| ||||||| |||||| ||| |||||||||||||||||||||||| ||||    
T  53337446 atacatcaacttttattgacccaaaattctcttataaataggaccggagggagta 53337500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 6924746 - 6924802
Alignment:
Q  10 aaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggac 67  Q
    |||||| || |||||||||||||||||||||||||||| ||| ||||||| |||||||    
T  6924746 aaaatttagaccaaatacattaacttttgttgacctaacttt-tcttatatataggac 6924802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 41615732 - 41615683
Alignment:
Q  22 aaatacattaacttttgttgacctaaatttctcttataaataggaccgga 71  Q
    |||||||| |||||||||||| | || |||||||||||||||||||||||    
T  41615732 aaatacatcaacttttgttgatccaattttctcttataaataggaccgga 41615683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 78
Target Start/End: Complemental strand, 44900127 - 44900080
Alignment:
Q  31 aacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||  ||| ||||||||||||||||||||||| ||||    
T  44900127 aacttttgttgaccagaatatctcttataaataggaccggagggagta 44900080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 45725930 - 45725977
Alignment:
Q  22 aaatacattaacttttgttgacctaaatttctcttataaataggaccg 69  Q
    |||||| |||||||||||||||  || |||||||||||||||||||||    
T  45725930 aaatacgttaacttttgttgacgaaactttctcttataaataggaccg 45725977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 1716355 - 1716301
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| || | ||||||||||||| ||||||||| ||||    
T  1716355 atacatcaacttttgttgaccaaattatctcttataaataagaccggagggagta 1716301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 52756751 - 52756805
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||| ||||||||||||||| ||| ||||    
T  52756751 atacatcaacttttgttgacccaaaattcttttataaataggaccgaagggagta 52756805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 45478168 - 45478217
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggagg 73  Q
    |||||| ||||||| |||||| | ||||||||||||||||||| ||||||    
T  45478168 atacatcaacttttattgacccacatttctcttataaataggatcggagg 45478217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 9876693 - 9876653
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaatag 64  Q
    ||||||||| ||||||| || ||||||||||||||||||||    
T  9876693 atacattaaattttgttaacgtaaatttctcttataaatag 9876653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 21636196 - 21636248
Alignment:
Q  21 caaatacattaacttttgttgacctaaatttctcttataaataggaccggagg 73  Q
    |||||||||||| |||||||||   |||| |||||||||||||| ||||||||    
T  21636196 caaatacattaatttttgttgattcaaatgtctcttataaatagaaccggagg 21636248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 38160426 - 38160378
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggag 72  Q
    |||||| || |||||||||||||||| ||||||||||||| ||| ||||    
T  38160426 atacatcaatttttgttgacctaaatctctcttataaatatgactggag 38160378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 8e-35; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 22722008 - 22721925
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaatatat 84  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  22722008 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattatat 22721925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 4238671 - 4238594
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  4238671 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 4238594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 10298056 - 10297979
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  10298056 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 10297979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 19557105 - 19557182
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19557105 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 19557182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 44785449 - 44785526
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  44785449 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 44785526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 49823434 - 49823511
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  49823434 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 49823511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 48340474 - 48340392
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaatata 83  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  48340474 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttgtaaataggaccggaggtagtactata 48340392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 2787885 - 2787962
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  2787885 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagatagta 2787962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 8437502 - 8437425
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  8437502 atctagttaaaaattcagtccaaatacattcacttttattgacctaaatttctcttataaataggaccggaggtagta 8437425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 8817439 - 8817516
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  8817439 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggtagta 8817516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 17653789 - 17653712
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  17653789 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 17653712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 21295379 - 21295456
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  21295379 atctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 21295456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 34080083 - 34080160
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  34080083 atcttgttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 34080160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 37508998 - 37508921
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  37508998 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 37508921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 38964469 - 38964392
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  38964469 atctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggaggtagta 38964392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 51406750 - 51406673
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  51406750 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 51406673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 35513550 - 35513471
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaat 80  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  35513550 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgaagggagtaat 35513471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 9111547 - 9111624
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  9111547 atctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggtagta 9111624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 36095733 - 36095810
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||    
T  36095733 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttatcttataaataggaccggagggagta 36095810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 40691049 - 40691126
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||    
T  40691049 atctagttaaaaattcagtccaaatacattcacttttgttaacctaaatttctcttataaataggaccggagttagta 40691126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 42507408 - 42507485
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  42507408 atctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttctattataaataggaccggaggtagta 42507485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 46208107 - 46208030
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  46208107 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 46208030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 42170399 - 42170476
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  42170399 atctggttaaaaattcactccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 42170476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 6013389 - 6013461
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||    
T  6013389 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaattggactggagg 6013461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 33942985 - 33943055
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccgga 71  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||    
T  33942985 atctagttaaaaattcagtccaaatacattaacttttgttgacctaactttcttttataaataggatcgga 33943055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 4238670 - 4238724
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||||||||    
T  4238670 atacatcaacttttgttgaccaaaaattctcttataaataggaccggaggtagta 4238724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 17653788 - 17653842
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||||||||    
T  17653788 atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 17653842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 21295380 - 21295326
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||| ||||    
T  21295380 atacatcaacttttgttgacctaaaattctcttataaataggaccggagggagta 21295326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 37508997 - 37509051
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||||||||    
T  37508997 atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 37509051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 46208106 - 46208160
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||| ||||    
T  46208106 atacatcaacttttgttgacctaaaattctcttataaataggaccggagggagta 46208160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 33128261 - 33128212
Alignment:
Q  23 aatacattaacttttgttgacctaaatttctcttataaataggaccggag 72  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  33128261 aatacattaacttttgttgacctaaatttctcttataattaggactggag 33128212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 9213588 - 9213652
Alignment:
Q  20 ccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaatatat 84  Q
    |||||||||| || |||||||||||||||||||||| ||||||||||| ||||| ||||| ||||    
T  9213588 ccaaatacatcaatttttgttgacctaaatttctctaataaataggacgggagggagtaaaatat 9213652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 48340473 - 48340529
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaat 80  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  48340473 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaat 48340529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 6013382 - 6013332
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtaatat 82  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||||    
T  6013382 acttttgttgacccaaaattctcttataaataggaccggagggagtaatat 6013332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 10298055 - 10298109
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  10298055 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 10298109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 19557106 - 19557052
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  19557106 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 19557052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 34080084 - 34080030
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  34080084 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 34080030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 38964468 - 38964522
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  38964468 atacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagta 38964522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 40691050 - 40690996
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  40691050 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 40690996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 49823435 - 49823381
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  49823435 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 49823381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 9111548 - 9111499
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggagg 73  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||||||||    
T  9111548 atacatcaacttttgttgacccaaaattctcttataaataggaccggagg 9111499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 42507409 - 42507360
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggagg 73  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||||||||    
T  42507409 atacatcaacttttgttgacccaaaattctcttataaataggaccggagg 42507360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 43323132 - 43323072
Alignment:
Q  6 gttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaatagga 66  Q
    |||||||||| | ||||||||||| |||||||||||||| || ||| ||||||||||||||    
T  43323132 gttaaaaatttaatccaaatacatcaacttttgttgacccaattttttcttataaatagga 43323072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 8817440 - 8817393
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccgga 71  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||||||    
T  8817440 atacatcaacttttgttgacccaaaattctcttataaataggaccgga 8817393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 8951954 - 8952009
Alignment:
Q  6 gttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaa 61  Q
    |||||||||||||||||||||||||||||||||| ||   || |||||||||||||    
T  8951954 gttaaaaattcagtccaaatacattaacttttgtcgattcaactttctcttataaa 8952009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 22722007 - 22722054
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccgga 71  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||||||    
T  22722007 atacatcaacttttgttgacccaaaattctcttataaataggaccgga 22722054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 26001141 - 26001184
Alignment:
Q  25 tacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||    
T  26001141 tacattaacttttgttgacttaaatttctcttataaatatgacc 26001184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 2131734 - 2131804
Alignment:
Q  10 aaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaat 80  Q
    |||||| || ||| |||||| |||||||||||||| |||| ||||| |||| |||||||||||| ||||||    
T  2131734 aaaatttagaccagatacatcaacttttgttgacccaaatgtctctcataagtaggaccggagggagtaat 2131804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 2787886 - 2787832
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||| ||||| ||| |||||||||||||||||||||||| ||||    
T  2787886 atacatcaacttttgctgacccaaaattctcttataaataggaccggagggagta 2787832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 5323279 - 5323341
Alignment:
Q  20 ccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaatat 82  Q
    |||||||||| |||||||||||||| ||||||  ||||||||||| | |||||| ||||||||    
T  5323279 ccaaatacatcaacttttgttgacccaaattttacttataaatagtatcggagggagtaatat 5323341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 8437501 - 8437555
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||  ||| |||||||||||||||||||||||| ||||    
T  8437501 atacatcaacttttgttgactcaaaattctcttataaataggaccggagggagta 8437555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 9027196 - 9027142
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| || ||| ||||||||||||||||||||| ||||    
T  9027196 atacatcaacttttgttgacccaactttatcttataaataggaccggagggagta 9027142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 44785450 - 44785396
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| ||||||||||||||| |||||||| ||||    
T  44785450 atacatcaacttttgttgacccaaaattctcttataaatagaaccggaggaagta 44785396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 51406749 - 51406803
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| || ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  51406749 atacatcaatttttgttgacccaaaattctcttataaataggaccggagggagta 51406803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 9213577 - 9213516
Alignment:
Q  17 agtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||| |||||||||||||  |||| ||| ||||||||||||||||||| ||||    
T  9213577 agtccagatacatcaacttttgttgactaaaatgtcttttataaataggaccggagggagta 9213516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 42170400 - 42170356
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||    
T  42170400 atacatcaacttttgttgacccaaaattctcttataaataggacc 42170356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 1262279 - 1262321
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaatagga 66  Q
    |||||||||||||||||||| ||||| |||||| |||||||||    
T  1262279 atacattaacttttgttgacgtaaatgtctcttctaaatagga 1262321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 8092665 - 8092595
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccgga 71  Q
    |||| |||||||||| |||| | |||||| |||||| |||||   || |||||||||||||||||||||||    
T  8092665 atctggttaaaaatttagtcgagatacatcaactttagttgattcaattttctcttataaataggaccgga 8092595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 33942986 - 33942944
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaatagga 66  Q
    |||||| |||||||||||||| || ||||||||||||||||||    
T  33942986 atacatcaacttttgttgacccaagtttctcttataaatagga 33942944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 86
Target Start/End: Original strand, 34988151 - 34988213
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaatatatta 86  Q
    |||||| |||| ||||||||  |||| | ||||||||||||||||||||| ||||| ||||||    
T  34988151 atacatcaactattgttgactcaaatatttcttataaataggaccggagggagtaacatatta 34988213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 46 - 82
Target Start/End: Complemental strand, 21653375 - 21653339
Alignment:
Q  46 aaatttctcttataaataggaccggaggtagtaatat 82  Q
    ||||||||||| |||||||||||||||| ||||||||    
T  21653375 aaatttctcttgtaaataggaccggagggagtaatat 21653339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 55249986 - 55249923
Alignment:
Q  24 atacattaacttttgttgacctaaatttctct--tataaataggaccggaggtagtaatatatt 85  Q
    |||||| |||||||||||| |||||| |||||  || ||||||||||||||| |||| ||||||    
T  55249986 atacatcaacttttgttgatctaaatgtctctcataaaaataggaccggagggagtattatatt 55249923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 74; Significance: 1e-33; HSPs: 2)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 12937 - 12860
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  12937 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 12860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 12936 - 12990
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||| ||||| ||| |||||||||||||||||||||||| ||||    
T  12936 atacatcaacttttgctgacccaaaattctcttataaataggaccggagggagta 12990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 71; Significance: 8e-32; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 49579 - 49505
Alignment:
Q  4 tagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  49579 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 49505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 49579 - 49636
Alignment:
Q  22 aaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagtaa 79  Q
    |||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  49579 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaa 49636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707 (Bit Score: 70; Significance: 3e-31; HSPs: 2)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 1412 - 1335
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  1412 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggatgtagta 1335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 1411 - 1453
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaatagga 66  Q
    |||||| |||||||||||||| ||| |||||||||||||||||    
T  1411 atacatcaacttttgttgacccaaaattctcttataaatagga 1453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 70; Significance: 3e-31; HSPs: 2)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 6184 - 6261
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  6184 atctagttaaaaattcagtccacatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 6261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 6185 - 6131
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| |||||||||||||| ||| || ||||||||||||||||||||| ||||    
T  6185 atacatcaacttttgttgacccaaaattttcttataaataggaccggagggagta 6131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 13782 - 13845
Alignment:
Q  4 tagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggac 67  Q
    |||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||| ||||||    
T  13782 tagttaaaaattcagttcaaatatattaatttttgttgacctaaatttctcttataagtaggac 13845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 231358 - 231433
Alignment:
Q  3 ctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| ||||||||||||| |||||| |||||||||||| | || |||||||||||| ||||| |||||| ||||    
T  231358 ctagttcaaaattcagtccagatacataaacttttgttgatccaactttctcttataattaggatcggagggagta 231433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 78
Target Start/End: Complemental strand, 231350 - 231303
Alignment:
Q  31 aacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||  ||||| |||||||||||||||||| ||||    
T  231350 aacttttgttgacctaatattctcctataaataggaccggagggagta 231303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 43 - 114
Alignment:
Q  6 gttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||| ||||||||||||| |||||||||||||| |  |||||| ||||||||| |||||||| ||||    
T  43 gttaaaaatttagtccaaatacatcaacttttgttgaccaatctttctc-tataaatagaaccggagggagta 114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 12406 - 12478
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccggagg 73  Q
    |||| ||||| |||| || ||||| |||  ||||||| |||||| |||| |||||||||||||||||||||||    
T  12406 atctggttaagaatttagaccaaacacaccaactttttttgaccaaaatatctcttataaataggaccggagg 12478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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