View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21350_high_3 (Length: 307)

Name: NF21350_high_3
Description: NF21350
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21350_high_3
NF21350_high_3
[»] chr5 (19 HSPs)
chr5 (18-295)||(27514666-27514944)
chr5 (89-124)||(15906523-15906558)
chr5 (88-134)||(15889433-15889479)
chr5 (86-124)||(42613207-42613245)
chr5 (88-124)||(1358498-1358534)
chr5 (88-124)||(35270684-35270720)
chr5 (86-124)||(776700-776738)
chr5 (87-121)||(12611041-12611075)
chr5 (87-124)||(10704334-10704371)
chr5 (87-124)||(32858691-32858727)
chr5 (88-124)||(6489029-6489065)
chr5 (92-124)||(9893674-9893706)
chr5 (88-124)||(10705981-10706017)
chr5 (90-134)||(12218278-12218322)
chr5 (87-123)||(18331728-18331764)
chr5 (86-134)||(24408515-24408563)
chr5 (88-124)||(26166761-26166797)
chr5 (224-268)||(27718485-27718529)
chr5 (88-124)||(34191455-34191491)
[»] chr6 (11 HSPs)
chr6 (86-134)||(17935749-17935797)
chr6 (86-134)||(9367421-9367469)
chr6 (87-135)||(20744159-20744207)
chr6 (87-124)||(16890451-16890488)
chr6 (87-124)||(26357948-26357985)
chr6 (88-124)||(1769790-1769825)
chr6 (88-124)||(12582232-12582268)
chr6 (88-124)||(12735246-12735282)
chr6 (92-124)||(27907954-27907986)
chr6 (88-124)||(30579881-30579917)
chr6 (88-124)||(33976266-33976302)
[»] chr7 (15 HSPs)
chr7 (87-134)||(7735551-7735598)
chr7 (88-124)||(43680993-43681029)
chr7 (90-124)||(27993032-27993066)
chr7 (87-124)||(6781828-6781865)
chr7 (86-134)||(10026014-10026062)
chr7 (89-124)||(19578140-19578175)
chr7 (87-124)||(5041360-5041397)
chr7 (90-123)||(6565549-6565582)
chr7 (87-120)||(11893155-11893188)
chr7 (87-124)||(19416535-19416572)
chr7 (88-124)||(3830090-3830126)
chr7 (88-124)||(18023701-18023737)
chr7 (88-124)||(19036105-19036141)
chr7 (88-124)||(20718495-20718531)
chr7 (87-123)||(47342698-47342734)
[»] chr1 (16 HSPs)
chr1 (87-124)||(25086504-25086541)
chr1 (90-134)||(32962587-32962631)
chr1 (88-124)||(50040378-50040414)
chr1 (88-135)||(52267786-52267833)
chr1 (86-124)||(30382516-30382554)
chr1 (90-124)||(32497484-32497518)
chr1 (87-121)||(38862123-38862157)
chr1 (86-124)||(44860886-44860924)
chr1 (87-124)||(1605417-1605454)
chr1 (87-124)||(8736456-8736493)
chr1 (87-124)||(26644051-26644088)
chr1 (89-134)||(29233967-29234012)
chr1 (87-124)||(48100743-48100780)
chr1 (88-124)||(5907821-5907857)
chr1 (88-124)||(16033453-16033489)
chr1 (88-124)||(29739359-29739395)
[»] chr4 (13 HSPs)
chr4 (88-124)||(7248358-7248394)
chr4 (88-134)||(21318246-21318292)
chr4 (87-121)||(56564989-56565023)
chr4 (87-124)||(16431637-16431674)
chr4 (87-124)||(19588175-19588212)
chr4 (87-124)||(48226501-48226538)
chr4 (87-134)||(9946448-9946495)
chr4 (87-134)||(16470325-16470372)
chr4 (88-121)||(28479934-28479967)
chr4 (88-121)||(28480809-28480842)
chr4 (88-121)||(28481684-28481717)
chr4 (87-124)||(39171373-39171410)
chr4 (88-124)||(50362142-50362178)
[»] scaffold0050 (1 HSPs)
scaffold0050 (88-134)||(53373-53419)
[»] chr3 (18 HSPs)
chr3 (86-124)||(32843265-32843303)
chr3 (87-124)||(33745120-33745157)
chr3 (88-124)||(20018219-20018255)
chr3 (88-124)||(27065735-27065771)
chr3 (88-134)||(986946-986992)
chr3 (87-121)||(20370287-20370321)
chr3 (88-121)||(1149075-1149108)
chr3 (87-120)||(21506765-21506798)
chr3 (87-124)||(25340927-25340964)
chr3 (87-124)||(25441503-25441540)
chr3 (87-124)||(32909304-32909341)
chr3 (87-124)||(49975808-49975845)
chr3 (87-124)||(54018409-54018446)
chr3 (88-124)||(544776-544812)
chr3 (88-124)||(8127485-8127521)
chr3 (88-124)||(8238586-8238622)
chr3 (88-124)||(10594699-10594735)
chr3 (90-134)||(52575971-52576015)
[»] chr8 (13 HSPs)
chr8 (89-134)||(3672609-3672654)
chr8 (89-124)||(5208036-5208071)
chr8 (89-124)||(11479640-11479675)
chr8 (87-134)||(32944833-32944880)
chr8 (88-122)||(15664533-15664567)
chr8 (87-121)||(29499792-29499826)
chr8 (90-124)||(31336810-31336844)
chr8 (87-124)||(24023815-24023852)
chr8 (88-124)||(8881297-8881333)
chr8 (90-134)||(24023408-24023452)
chr8 (88-124)||(24838173-24838209)
chr8 (88-124)||(26773805-26773841)
chr8 (88-124)||(39821906-39821942)
[»] chr2 (16 HSPs)
chr2 (88-133)||(27244679-27244724)
chr2 (87-124)||(41859873-41859910)
chr2 (86-134)||(22558997-22559045)
chr2 (87-134)||(660815-660862)
chr2 (86-124)||(23407021-23407059)
chr2 (86-124)||(24579671-24579709)
chr2 (88-121)||(6141242-6141275)
chr2 (87-124)||(7350567-7350604)
chr2 (89-134)||(20990897-20990942)
chr2 (88-121)||(35685067-35685100)
chr2 (90-134)||(23250313-23250357)
chr2 (88-124)||(24592849-24592885)
chr2 (90-134)||(29133477-29133521)
chr2 (88-124)||(36474784-36474820)
chr2 (88-124)||(37132983-37133019)
chr2 (88-124)||(42347690-42347726)
[»] scaffold0259 (1 HSPs)
scaffold0259 (87-121)||(5434-5468)
[»] scaffold0044 (1 HSPs)
scaffold0044 (88-126)||(42335-42373)
[»] scaffold0034 (1 HSPs)
scaffold0034 (88-129)||(114957-114998)
[»] scaffold0028 (1 HSPs)
scaffold0028 (88-124)||(72778-72814)
[»] scaffold0016 (1 HSPs)
scaffold0016 (88-124)||(99059-99095)


Alignment Details
Target: chr5 (Bit Score: 181; Significance: 8e-98; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 18 - 295
Target Start/End: Original strand, 27514666 - 27514944
Alignment:
Q  18 ctcgtagatacgataatataaaatactttgataccgttatacggttttataaagctataataaagatgttggacaatgcataaaatatgcaaggtctagg 117  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||     
T  27514666 ctcgtagatatgataatataaaatactttgatactgttatacggttttataaagcaataataaagatgttggataatgcataaaatatgcaagctctagt 27514765  T
Q  118 gttcaaaaccccaccacacnnnnnnnnnt---tataataaagatagacgtcaggcaatgcatgcaaaatgaaagaaaaaacatgttgcgaaatgatgtac 214  Q
    |||||||||||||||||||             |||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27514766 gttcaaaaccccaccacacaaaaataaaaaactataataaagataggcgtcgggcaatgcatgcaaagtgaaagaaaaaacatgttgcgaaatgatgtac 27514865  T
Q  215 ttcttgtatattaaggtatttgcaagtcaaatttgagcttcaagtgcttaattttagtcaacacatttataacctatgcta 295  Q
    ||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27514866 ttcttg--tattaaggtatttgcaagttaaatttgagcttcaagtgcttaattttagtcaacacatttataacctaggcta 27514944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 124
Target Start/End: Original strand, 15906523 - 15906558
Alignment:
Q  89 gacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||||||||||||||||||||||||||    
T  15906523 gacaatgcataaaatatgcaaggtctagggttcaaa 15906558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 134
Target Start/End: Original strand, 15889433 - 15889479
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaaaccccaccac 134  Q
    ||||||||||||| ||||||||||||||||||||||| ||| |||||    
T  15889433 ggacaatgcataatatatgcaaggtctagggttcaaaccccgaccac 15889479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 124
Target Start/End: Complemental strand, 42613245 - 42613207
Alignment:
Q  86 ttggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  42613245 ttggacaatgcataaaatatgcaaggtctggggttcaaa 42613207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 1358534 - 1358498
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||||||||| |||||||||||||||||    
T  1358534 ggacaatgcataaaatatgtaaggtctagggttcaaa 1358498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 35270720 - 35270684
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    |||||||||||||||||||||||||| ||||||||||    
T  35270720 ggacaatgcataaaatatgcaaggtccagggttcaaa 35270684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 124
Target Start/End: Original strand, 776700 - 776738
Alignment:
Q  86 ttggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  776700 ttggacaatgcataaaatatgcaaggtctgaggttcaaa 776738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 121
Target Start/End: Complemental strand, 12611075 - 12611041
Alignment:
Q  87 tggacaatgcataaaatatgcaaggtctagggttc 121  Q
    |||||||||||||||||||||||||||| ||||||    
T  12611075 tggacaatgcataaaatatgcaaggtctggggttc 12611041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 124
Target Start/End: Complemental strand, 10704371 - 10704334
Alignment:
Q  87 tggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    |||||||||||||||||||||||||||  |||||||||    
T  10704371 tggacaatgcataaaatatgcaaggtccggggttcaaa 10704334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 124
Target Start/End: Original strand, 32858691 - 32858727
Alignment:
Q  87 tggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  32858691 tggacaatgcataaaatatgcaaggtc-agggttcaaa 32858727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 6489029 - 6489065
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  6489029 ggacaatgcataatatatgcaaggtctggggttcaaa 6489065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 124
Target Start/End: Complemental strand, 9893706 - 9893674
Alignment:
Q  92 aatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||||||||||||| |||||||||    
T  9893706 aatgcataaaatatgcaaggtctggggttcaaa 9893674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 10705981 - 10706017
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  10705981 ggacaatacataaaatatgcaaggtctggggttcaaa 10706017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 134
Target Start/End: Complemental strand, 12218322 - 12218278
Alignment:
Q  90 acaatgcataaaatatgcaaggtctagggttcaaaaccccaccac 134  Q
    ||||||||||||||||||||||||| | ||||||| ||| |||||    
T  12218322 acaatgcataaaatatgcaaggtctggagttcaaatcccgaccac 12218278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 123
Target Start/End: Original strand, 18331728 - 18331764
Alignment:
Q  87 tggacaatgcataaaatatgcaaggtctagggttcaa 123  Q
    |||||||||||||||||||||||||||  ||||||||    
T  18331728 tggacaatgcataaaatatgcaaggtccggggttcaa 18331764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 134
Target Start/End: Original strand, 24408515 - 24408563
Alignment:
Q  86 ttggacaatgcataaaatatgcaaggtctagggttcaaaaccccaccac 134  Q
    |||||| |||||||| ||||||||||||| ||||||||| ||| |||||    
T  24408515 ttggacgatgcataatatatgcaaggtctggggttcaaaccccgaccac 24408563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 26166761 - 26166797
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  26166761 ggacaatgcatcaaatatgcaaggtccagggttcaaa 26166797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 268
Target Start/End: Original strand, 27718485 - 27718529
Alignment:
Q  224 attaaggtatttgcaagtcaaatttgagcttcaagtgcttaattt 268  Q
    ||||||||||||||||||||| || |||||||| ||||| |||||    
T  27718485 attaaggtatttgcaagtcaagttagagcttcatgtgctcaattt 27718529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 34191455 - 34191491
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||||||||||||||||  |||||||||    
T  34191455 ggacaatgcataaaatatgcaaggtccggggttcaaa 34191491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 134
Target Start/End: Original strand, 17935749 - 17935797
Alignment:
Q  86 ttggacaatgcataaaatatgcaaggtctagggttcaaaaccccaccac 134  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  17935749 ttggacaatgcataaaatatgcaaggtctagggttcaaatcccgaccac 17935797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 134
Target Start/End: Original strand, 9367421 - 9367469
Alignment:
Q  86 ttggacaatgcataaaatatgcaaggtctagggttcaaaaccccaccac 134  Q
    ||||||||||||||||||||||||||||| || |||||| ||| |||||    
T  9367421 ttggacaatgcataaaatatgcaaggtctgggattcaaaccccgaccac 9367469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 20744159 - 20744207
Alignment:
Q  87 tggacaatgcataaaatatgcaaggtctagggttcaaaaccccaccaca 135  Q
    |||||||||||||| ||||||||||||| ||||||||| ||| ||||||    
T  20744159 tggacaatgcataatatatgcaaggtctggggttcaaaccccgaccaca 20744207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 124
Target Start/End: Complemental strand, 16890488 - 16890451
Alignment:
Q  87 tggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  16890488 tggacaatgcataaaatatgtaaggtctaaggttcaaa 16890451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 124
Target Start/End: Original strand, 26357948 - 26357985
Alignment:
Q  87 tggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||||||||||||| |||||| |||||||    
T  26357948 tggacaatgcataaaatatgcaacgtctagagttcaaa 26357985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 1769790 - 1769825
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||||||||||||||||| |||||||||    
T  1769790 ggacaatgcataaaatatgcaaggtct-gggttcaaa 1769825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 12582268 - 12582232
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||||||||||||||||| | |||||||    
T  12582268 ggacaatgcataaaatatgcaaggtctggagttcaaa 12582232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 12735282 - 12735246
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||||||||||||||| | |||||||||    
T  12735282 ggacaatgcataaaatatgcaaggtttggggttcaaa 12735246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 124
Target Start/End: Complemental strand, 27907986 - 27907954
Alignment:
Q  92 aatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||||||||||||| |||||||||    
T  27907986 aatgcataaaatatgcaaggtctggggttcaaa 27907954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 30579881 - 30579917
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||||||||||||||| | |||||||||    
T  30579881 ggacaatgcataaaatatgcaaggtttggggttcaaa 30579917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 33976266 - 33976302
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||||||||||||||||  |||||||||    
T  33976266 ggacaatgcataaaatatgcaaggtccggggttcaaa 33976302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 134
Target Start/End: Original strand, 7735551 - 7735598
Alignment:
Q  87 tggacaatgcataaaatatgcaaggtctagggttcaaaaccccaccac 134  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||    
T  7735551 tggacaatgcataaaatatgcaaggtctagggttcaaagcccgaccac 7735598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 43681029 - 43680993
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    |||||||||||||||||||||||||||||||||||||    
T  43681029 ggacaatgcataaaatatgcaaggtctagggttcaaa 43680993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 124
Target Start/End: Complemental strand, 27993066 - 27993032
Alignment:
Q  90 acaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    |||||||||||||||||||||||||||||||||||    
T  27993066 acaatgcataaaatatgcaaggtctagggttcaaa 27993032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 124
Target Start/End: Original strand, 6781828 - 6781865
Alignment:
Q  87 tggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  6781828 tggacaatgcataaaatatgcaaggtccagggttcaaa 6781865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 134
Target Start/End: Original strand, 10026014 - 10026062
Alignment:
Q  86 ttggacaatgcataaaatatgcaaggtctagggttcaaaaccccaccac 134  Q
    ||||||||||||||||||||||||||| | ||||||||| ||| |||||    
T  10026014 ttggacaatgcataaaatatgcaaggtatggggttcaaaccccgaccac 10026062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 124
Target Start/End: Complemental strand, 19578175 - 19578140
Alignment:
Q  89 gacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    |||||||||||||||||||||||||| |||||||||    
T  19578175 gacaatgcataaaatatgcaaggtctggggttcaaa 19578140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 124
Target Start/End: Original strand, 5041360 - 5041397
Alignment:
Q  87 tggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    |||||||||||||| ||||||||||||| |||||||||    
T  5041360 tggacaatgcataatatatgcaaggtctggggttcaaa 5041397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 123
Target Start/End: Original strand, 6565549 - 6565582
Alignment:
Q  90 acaatgcataaaatatgcaaggtctagggttcaa 123  Q
    ||||||||||||||||||||||||| ||||||||    
T  6565549 acaatgcataaaatatgcaaggtctggggttcaa 6565582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 120
Target Start/End: Original strand, 11893155 - 11893188
Alignment:
Q  87 tggacaatgcataaaatatgcaaggtctagggtt 120  Q
    ||||||||||||||||||||||||||||| ||||    
T  11893155 tggacaatgcataaaatatgcaaggtctacggtt 11893188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 124
Target Start/End: Original strand, 19416535 - 19416572
Alignment:
Q  87 tggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    |||||||||||||||||||||||||||  |||||||||    
T  19416535 tggacaatgcataaaatatgcaaggtccggggttcaaa 19416572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 3830090 - 3830126
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  3830090 ggacaatgcataatatatgcaaggtccagggttcaaa 3830126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 18023701 - 18023737
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  18023701 ggacaatgcataatatatgcaaggtccagggttcaaa 18023737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 19036141 - 19036105
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||||||||||||||||| | |||||||    
T  19036141 ggacaatgcataaaatatgcaaggtctggagttcaaa 19036105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 20718495 - 20718531
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||||||||||||||||| | |||||||    
T  20718495 ggacaatgcataaaatatgcaaggtctggagttcaaa 20718531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 123
Target Start/End: Original strand, 47342698 - 47342734
Alignment:
Q  87 tggacaatgcataaaatatgcaaggtctagggttcaa 123  Q
    |||||||||||||||||||||||||| | ||||||||    
T  47342698 tggacaatgcataaaatatgcaaggtttggggttcaa 47342734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 124
Target Start/End: Original strand, 25086504 - 25086541
Alignment:
Q  87 tggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25086504 tggacaatgcataaaatatgcaaggtctagggttcaaa 25086541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 134
Target Start/End: Original strand, 32962587 - 32962631
Alignment:
Q  90 acaatgcataaaatatgcaaggtctagggttcaaaaccccaccac 134  Q
    |||||||||||||||||||||||| |||||||||| ||| |||||    
T  32962587 acaatgcataaaatatgcaaggtccagggttcaaaccccgaccac 32962631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 50040378 - 50040414
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    |||||||||||||||||||||||||| ||||||||||    
T  50040378 ggacaatgcataaaatatgcaaggtccagggttcaaa 50040414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 135
Target Start/End: Original strand, 52267786 - 52267833
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaaaccccaccaca 135  Q
    ||||||||||||||||||||||||||| || |||||| ||| ||||||    
T  52267786 ggacaatgcataaaatatgcaaggtctgggattcaaatcccgaccaca 52267833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 124
Target Start/End: Original strand, 30382516 - 30382554
Alignment:
Q  86 ttggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||||||||||||||||||| | |||||||    
T  30382516 ttggacaatgcataaaatatgcaaggtctggcgttcaaa 30382554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 124
Target Start/End: Complemental strand, 32497518 - 32497484
Alignment:
Q  90 acaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||| |||||||||||||||||||||||    
T  32497518 acaatgcataatatatgcaaggtctagggttcaaa 32497484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 121
Target Start/End: Original strand, 38862123 - 38862157
Alignment:
Q  87 tggacaatgcataaaatatgcaaggtctagggttc 121  Q
    |||||||||||||||||||||||||||| ||||||    
T  38862123 tggacaatgcataaaatatgcaaggtctggggttc 38862157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 124
Target Start/End: Complemental strand, 44860924 - 44860886
Alignment:
Q  86 ttggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    |||||||||||||||||||| |||||||| |||||||||    
T  44860924 ttggacaatgcataaaatatccaaggtctggggttcaaa 44860886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 124
Target Start/End: Original strand, 1605417 - 1605454
Alignment:
Q  87 tggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    |||||||||||||||||||||||||||  |||||||||    
T  1605417 tggacaatgcataaaatatgcaaggtccggggttcaaa 1605454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 124
Target Start/End: Original strand, 8736456 - 8736493
Alignment:
Q  87 tggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    |||||||||||||||||||||||||||  |||||||||    
T  8736456 tggacaatgcataaaatatgcaaggtccggggttcaaa 8736493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 124
Target Start/End: Original strand, 26644051 - 26644088
Alignment:
Q  87 tggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  26644051 tggacaatacataaaatatgcaatgtctagggttcaaa 26644088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 29234012 - 29233967
Alignment:
Q  89 gacaatgcataaaatatgcaaggtctagggttcaaaaccccaccac 134  Q
    |||||||||||||||||||||||||| |||||| || ||| |||||    
T  29234012 gacaatgcataaaatatgcaaggtctggggttcgaaccccaaccac 29233967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 124
Target Start/End: Original strand, 48100743 - 48100780
Alignment:
Q  87 tggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    |||||||||||||||||||||||||| | |||||||||    
T  48100743 tggacaatgcataaaatatgcaaggtttggggttcaaa 48100780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 5907821 - 5907857
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  5907821 ggacaatgcataatatatgcaaggtccagggttcaaa 5907857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 16033489 - 16033453
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  16033489 ggacaatgcataatatatgcaaggtctggggttcaaa 16033453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 29739359 - 29739395
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||||||||||||||||  |||||||||    
T  29739359 ggacaatgcataaaatatgcaaggtccggggttcaaa 29739395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000007; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 7248358 - 7248394
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    |||||||||||||||||||||||||||||||||||||    
T  7248358 ggacaatgcataaaatatgcaaggtctagggttcaaa 7248394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 134
Target Start/End: Complemental strand, 21318292 - 21318246
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaaaccccaccac 134  Q
    ||||||||||||| ||||||||||||||||||||||| ||| |||||    
T  21318292 ggacaatgcataatatatgcaaggtctagggttcaaaccccgaccac 21318246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 121
Target Start/End: Complemental strand, 56565023 - 56564989
Alignment:
Q  87 tggacaatgcataaaatatgcaaggtctagggttc 121  Q
    |||||||||||||||||||||||||||||||||||    
T  56565023 tggacaatgcataaaatatgcaaggtctagggttc 56564989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 124
Target Start/End: Original strand, 16431637 - 16431674
Alignment:
Q  87 tggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    |||||||||||||||||||||||||||| |||||||||    
T  16431637 tggacaatgcataaaatatgcaaggtctggggttcaaa 16431674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 124
Target Start/End: Original strand, 19588175 - 19588212
Alignment:
Q  87 tggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  19588175 tggacaatgcataaaatatgcaaggtccagggttcaaa 19588212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 124
Target Start/End: Complemental strand, 48226538 - 48226501
Alignment:
Q  87 tggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    |||||||||||||||||||||||||||| |||||||||    
T  48226538 tggacaatgcataaaatatgcaaggtctggggttcaaa 48226501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 87 - 134
Target Start/End: Original strand, 9946448 - 9946495
Alignment:
Q  87 tggacaatgcataaaatatgcaaggtctagggttcaaaaccccaccac 134  Q
    |||||||||||||||||||||||||||  ||||||||| ||| |||||    
T  9946448 tggacaatgcataaaatatgcaaggtccggggttcaaaccccgaccac 9946495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 87 - 134
Target Start/End: Original strand, 16470325 - 16470372
Alignment:
Q  87 tggacaatgcataaaatatgcaaggtctagggttcaaaaccccaccac 134  Q
    ||||||||||||||||||||||||||| ||||||| || ||| |||||    
T  16470325 tggacaatgcataaaatatgcaaggtccagggttcgaaccccgaccac 16470372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 121
Target Start/End: Complemental strand, 28479967 - 28479934
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttc 121  Q
    |||||| |||||||||||||||||||||||||||    
T  28479967 ggacaacgcataaaatatgcaaggtctagggttc 28479934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 121
Target Start/End: Complemental strand, 28480842 - 28480809
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttc 121  Q
    |||||| |||||||||||||||||||||||||||    
T  28480842 ggacaacgcataaaatatgcaaggtctagggttc 28480809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 121
Target Start/End: Complemental strand, 28481717 - 28481684
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttc 121  Q
    |||||| |||||||||||||||||||||||||||    
T  28481717 ggacaacgcataaaatatgcaaggtctagggttc 28481684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 124
Target Start/End: Complemental strand, 39171410 - 39171373
Alignment:
Q  87 tggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  39171410 tggacaatgcataaaatatgcaaggttcagggttcaaa 39171373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 50362178 - 50362142
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  50362178 ggacaatgcataatatatgcaaggtccagggttcaaa 50362142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 134
Target Start/End: Complemental strand, 53419 - 53373
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaaaccccaccac 134  Q
    ||||||||||||||||||||||||||| ||||||||| ||| |||||    
T  53419 ggacaatgcataaaatatgcaaggtctggggttcaaaccccgaccac 53373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000001; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 124
Target Start/End: Complemental strand, 32843303 - 32843265
Alignment:
Q  86 ttggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  32843303 ttggacaatgcataaaatatgcaaggtctggggttcaaa 32843265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 124
Target Start/End: Original strand, 33745120 - 33745157
Alignment:
Q  87 tggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    |||||||||||||||||||||||||||| |||||||||    
T  33745120 tggacaatgcataaaatatgcaaggtctggggttcaaa 33745157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 20018219 - 20018255
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||||||||||||||||| |||||||||    
T  20018219 ggacaatgcataaaatatgcaaggtctggggttcaaa 20018255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 27065771 - 27065735
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    |||||||||||||||||||||||||| ||||||||||    
T  27065771 ggacaatgcataaaatatgcaaggtccagggttcaaa 27065735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 134
Target Start/End: Complemental strand, 986992 - 986946
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaaaccccaccac 134  Q
    |||||||| ||||||||||||||||| |||||||||| ||| |||||    
T  986992 ggacaatgtataaaatatgcaaggtccagggttcaaaccccgaccac 986946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 121
Target Start/End: Complemental strand, 20370321 - 20370287
Alignment:
Q  87 tggacaatgcataaaatatgcaaggtctagggttc 121  Q
    |||||||||||||||||||||||||| ||||||||    
T  20370321 tggacaatgcataaaatatgcaaggtttagggttc 20370287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 121
Target Start/End: Complemental strand, 1149108 - 1149075
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttc 121  Q
    ||||||||||||| ||||||||||||||||||||    
T  1149108 ggacaatgcataatatatgcaaggtctagggttc 1149075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 120
Target Start/End: Complemental strand, 21506798 - 21506765
Alignment:
Q  87 tggacaatgcataaaatatgcaaggtctagggtt 120  Q
    |||||||||||||||||||||||||||| |||||    
T  21506798 tggacaatgcataaaatatgcaaggtctggggtt 21506765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 124
Target Start/End: Complemental strand, 25340964 - 25340927
Alignment:
Q  87 tggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    |||||||||||||||||||||||||||  |||||||||    
T  25340964 tggacaatgcataaaatatgcaaggtccggggttcaaa 25340927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 124
Target Start/End: Complemental strand, 25441540 - 25441503
Alignment:
Q  87 tggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    |||||||||||||| ||||||||||||| |||||||||    
T  25441540 tggacaatgcataatatatgcaaggtctggggttcaaa 25441503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 124
Target Start/End: Complemental strand, 32909341 - 32909304
Alignment:
Q  87 tggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    |||||||||||||||||||||||||||  |||||||||    
T  32909341 tggacaatgcataaaatatgcaaggtcctgggttcaaa 32909304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 124
Target Start/End: Complemental strand, 49975845 - 49975808
Alignment:
Q  87 tggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    |||||||||||||| ||||||||||||| |||||||||    
T  49975845 tggacaatgcataatatatgcaaggtctggggttcaaa 49975808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 124
Target Start/End: Complemental strand, 54018446 - 54018409
Alignment:
Q  87 tggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  54018446 tggacaatgcataaaatatgcaaggttcagggttcaaa 54018409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 544776 - 544812
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||||||||||||||||| | |||||||    
T  544776 ggacaatgcataaaatatgcaaggtctggtgttcaaa 544812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 8127485 - 8127521
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||||||||||||||| | |||||||||    
T  8127485 ggacaatgcataaaatatgcaaggtttggggttcaaa 8127521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 8238586 - 8238622
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  8238586 ggacaatgcataatatatgcaaggtctggggttcaaa 8238622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 10594699 - 10594735
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  10594699 ggacaatgcataatatatgcaaggtttagggttcaaa 10594735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 134
Target Start/End: Original strand, 52575971 - 52576015
Alignment:
Q  90 acaatgcataaaatatgcaaggtctagggttcaaaaccccaccac 134  Q
    ||||||||||||||||||||||||| |||||| || ||| |||||    
T  52575971 acaatgcataaaatatgcaaggtctggggttcgaatcccgaccac 52576015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000004; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 3672654 - 3672609
Alignment:
Q  89 gacaatgcataaaatatgcaaggtctagggttcaaaaccccaccac 134  Q
    |||||||||||||||||||||||| ||||||||||| ||| |||||    
T  3672654 gacaatgcataaaatatgcaaggtttagggttcaaaccccgaccac 3672609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 124
Target Start/End: Original strand, 5208036 - 5208071
Alignment:
Q  89 gacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    |||||||||||||||||||| |||||||||||||||    
T  5208036 gacaatgcataaaatatgcatggtctagggttcaaa 5208071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 124
Target Start/End: Complemental strand, 11479675 - 11479640
Alignment:
Q  89 gacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    |||||||||||||||||||||||| |||||||||||    
T  11479675 gacaatgcataaaatatgcaaggtttagggttcaaa 11479640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 87 - 134
Target Start/End: Complemental strand, 32944880 - 32944833
Alignment:
Q  87 tggacaatgcataaaatatgcaaggtctagggttcaaaaccccaccac 134  Q
    ||||||||||||||||||||||||||||  |||||||| ||| |||||    
T  32944880 tggacaatgcataaaatatgcaaggtctgaggttcaaaccccgaccac 32944833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 122
Target Start/End: Original strand, 15664533 - 15664567
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttca 122  Q
    ||||||||||||| |||||||||||||||||||||    
T  15664533 ggacaatgcataatatatgcaaggtctagggttca 15664567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 121
Target Start/End: Original strand, 29499792 - 29499826
Alignment:
Q  87 tggacaatgcataaaatatgcaaggtctagggttc 121  Q
    ||||||||||||||||||||||||||| |||||||    
T  29499792 tggacaatgcataaaatatgcaaggtccagggttc 29499826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 124
Target Start/End: Complemental strand, 31336844 - 31336810
Alignment:
Q  90 acaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||| |||||||||||||||||||||||    
T  31336844 acaatgcataatatatgcaaggtctagggttcaaa 31336810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 124
Target Start/End: Complemental strand, 24023852 - 24023815
Alignment:
Q  87 tggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    |||||||||||||||||||||||||||| | |||||||    
T  24023852 tggacaatgcataaaatatgcaaggtctggtgttcaaa 24023815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 8881297 - 8881333
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  8881297 ggacaatgcataatatatgcaaggtccagggttcaaa 8881333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 134
Target Start/End: Complemental strand, 24023452 - 24023408
Alignment:
Q  90 acaatgcataaaatatgcaaggtctagggttcaaaaccccaccac 134  Q
    ||||||||||||||||||||||||  ||||||||| ||| |||||    
T  24023452 acaatgcataaaatatgcaaggtccggggttcaaaccccgaccac 24023408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 24838209 - 24838173
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||||||||||||||||  |||||||||    
T  24838209 ggacaatgcataaaatatgcaaggtccggggttcaaa 24838173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 26773841 - 26773805
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    |||| |||||||| |||||||||||||||||||||||    
T  26773841 ggacgatgcataatatatgcaaggtctagggttcaaa 26773805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 39821906 - 39821942
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  39821906 ggacaatgcataatatatgcaaggtctggggttcaaa 39821942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000004; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 27244679 - 27244724
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaaaccccacca 133  Q
    ||||||||||||| ||||||||||||||||||||||| ||| ||||    
T  27244679 ggacaatgcataatatatgcaaggtctagggttcaaagcccgacca 27244724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 124
Target Start/End: Original strand, 41859873 - 41859910
Alignment:
Q  87 tggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    |||||||||||||||||||||||||||| |||||||||    
T  41859873 tggacaatgcataaaatatgcaaggtctggggttcaaa 41859910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 134
Target Start/End: Original strand, 22558997 - 22559045
Alignment:
Q  86 ttggacaatgcataaaatatgcaaggtctagggttcaaaaccccaccac 134  Q
    |||||||||||||||||||| |||||||| | ||||||||||| |||||    
T  22558997 ttggacaatgcataaaatatacaaggtctggagttcaaaacccgaccac 22559045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 87 - 134
Target Start/End: Complemental strand, 660862 - 660815
Alignment:
Q  87 tggacaatgcataaaatatgcaaggtctagggttcaaaaccccaccac 134  Q
    |||||||||||||| |||||||||||| |||||||||| ||| |||||    
T  660862 tggacaatgcataatatatgcaaggtccagggttcaaaccccgaccac 660815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 124
Target Start/End: Complemental strand, 23407059 - 23407021
Alignment:
Q  86 ttggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||||| ||||||||||||| |||||||||    
T  23407059 ttggacaatgcataatatatgcaaggtctggggttcaaa 23407021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 124
Target Start/End: Complemental strand, 24579709 - 24579671
Alignment:
Q  86 ttggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  24579709 ttggacaatgcataatatatgcaaggtccagggttcaaa 24579671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 121
Target Start/End: Original strand, 6141242 - 6141275
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttc 121  Q
    ||||||||||||| ||||||||||||||||||||    
T  6141242 ggacaatgcataatatatgcaaggtctagggttc 6141275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 124
Target Start/End: Original strand, 7350567 - 7350604
Alignment:
Q  87 tggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  7350567 tggacaatgcataatatatgcaaagtctagggttcaaa 7350604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 20990942 - 20990897
Alignment:
Q  89 gacaatgcataaaatatgcaaggtctagggttcaaaaccccaccac 134  Q
    ||||||||||||||||||||||||  |||||||||| ||| |||||    
T  20990942 gacaatgcataaaatatgcaaggttcagggttcaaaccccgaccac 20990897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 121
Target Start/End: Complemental strand, 35685100 - 35685067
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttc 121  Q
    ||||||||||||| ||||||||||||||||||||    
T  35685100 ggacaatgcataatatatgcaaggtctagggttc 35685067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 134
Target Start/End: Complemental strand, 23250357 - 23250313
Alignment:
Q  90 acaatgcataaaatatgcaaggtctagggttcaaaaccccaccac 134  Q
    ||||||||||| |||||||||||| |||||||||| ||| |||||    
T  23250357 acaatgcataatatatgcaaggtccagggttcaaaccccgaccac 23250313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 24592885 - 24592849
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  24592885 ggacaatgcataatatatgcaaggtctggggttcaaa 24592849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 134
Target Start/End: Complemental strand, 29133521 - 29133477
Alignment:
Q  90 acaatgcataaaatatgcaaggtctagggttcaaaaccccaccac 134  Q
    ||||||||||||||||||||| |||||||||| || ||| |||||    
T  29133521 acaatgcataaaatatgcaagatctagggttcgaaccccgaccac 29133477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 36474784 - 36474820
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||||||||||||||||  |||||||||    
T  36474784 ggacaatgcataaaatatgcaaggtccggggttcaaa 36474820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 37133019 - 37132983
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||||||||| |||||||| ||||||||    
T  37133019 ggacaatgcataaaatatgtaaggtctaaggttcaaa 37132983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 42347690 - 42347726
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    |||||||||||||||||||||||||| || |||||||    
T  42347690 ggacaatgcataaaatatgcaaggtccagtgttcaaa 42347726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 121
Target Start/End: Original strand, 5434 - 5468
Alignment:
Q  87 tggacaatgcataaaatatgcaaggtctagggttc 121  Q
    |||||||||||||||||||||||||||| ||||||    
T  5434 tggacaatgcataaaatatgcaaggtctggggttc 5468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 126
Target Start/End: Complemental strand, 42373 - 42335
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaaac 126  Q
    ||||||||||||| ||||||||||||| |||||||||||    
T  42373 ggacaatgcataatatatgcaaggtctggggttcaaaac 42335  T

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Target: scaffold0034 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 129
Target Start/End: Original strand, 114957 - 114998
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaaacccc 129  Q
    ||||| ||||||||||||||||||||  ||||||||||||||    
T  114957 ggacagtgcataaaatatgcaaggtccggggttcaaaacccc 114998  T

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Target: scaffold0028 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 72814 - 72778
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  72814 ggacaatgcataatatatgcaaggtccagggttcaaa 72778  T

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Target: scaffold0016 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 99059 - 99095
Alignment:
Q  88 ggacaatgcataaaatatgcaaggtctagggttcaaa 124  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  99059 ggacaatgcataatatatgcaaggtctggggttcaaa 99095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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