View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21351_low_13 (Length: 302)
Name: NF21351_low_13
Description: NF21351
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21351_low_13 |
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Alignment Details
Target: chr2 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 17 - 286
Target Start/End: Complemental strand, 33654030 - 33653761
Alignment:
| Q |
17 |
atgaagcaaacaaaaagatttcggacgctagaaccgaaagaaatcatgtatctaatcatgaaggttccgataagaaaaatactggagcaaaatctggcaa |
116 |
Q |
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| T |
33654030 |
atgaagcgaacaaaaagatttcggacgctaaaaccgaaagaaatcatgtatctaatcatgaaggtgccgataagaaaaatactgaagtgaaatctggcaa |
33653931 |
T |
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| Q |
117 |
agtttcaagtaaagaggcaaaatcgaagactccaaatgcatataaaaccaaatctgatatcatgtcaagaagtagaacattgccgggaagcagatctacg |
216 |
Q |
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|||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33653930 |
agtttcaagtaaagaggcaaaatcgaaggctccaaatgcatctaaaaccaaatctgatatcatgtcaagaagtagaacattgccgggaagcagatctacg |
33653831 |
T |
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| Q |
217 |
gttacgaagagcaaatcggaaaaggtaaactaacaagtaacaacagtccattctcgaccatatatatatt |
286 |
Q |
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| T |
33653830 |
gctacgaagagcaaatcggaaaaggtaaactaacaagtaacaacagtccattctcgaccatatatatatt |
33653761 |
T |
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