View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21351_low_16 (Length: 295)

Name: NF21351_low_16
Description: NF21351
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21351_low_16
NF21351_low_16
[»] chr3 (56 HSPs)
chr3 (1-295)||(54690667-54690976)
chr3 (180-259)||(52866449-52866528)
chr3 (180-291)||(12744899-12745009)
chr3 (180-238)||(19810940-19810998)
chr3 (180-238)||(41743622-41743680)
chr3 (180-294)||(10872704-10872817)
chr3 (180-257)||(54595822-54595899)
chr3 (180-294)||(27224575-27224688)
chr3 (180-238)||(26121589-26121647)
chr3 (180-238)||(26244430-26244488)
chr3 (184-238)||(40065357-40065411)
chr3 (179-252)||(40470454-40470527)
chr3 (180-225)||(48191747-48191792)
chr3 (180-252)||(21217198-21217270)
chr3 (186-246)||(44382850-44382910)
chr3 (180-259)||(7823899-7823978)
chr3 (180-259)||(54595819-54595898)
chr3 (180-250)||(331836-331906)
chr3 (198-260)||(14756436-14756498)
chr3 (180-258)||(26121571-26121649)
chr3 (180-258)||(26244412-26244490)
chr3 (180-238)||(34327558-34327616)
chr3 (180-238)||(37807542-37807600)
chr3 (187-294)||(38677560-38677666)
chr3 (180-238)||(47334692-47334750)
chr3 (180-241)||(9170144-9170205)
chr3 (180-257)||(30578254-30578331)
chr3 (180-241)||(30578269-30578330)
chr3 (181-238)||(45736720-45736777)
chr3 (180-237)||(52215931-52215988)
chr3 (191-259)||(23444316-23444384)
chr3 (180-212)||(23444349-23444381)
chr3 (176-220)||(24369134-24369178)
chr3 (180-294)||(25881131-25881244)
chr3 (180-224)||(26104806-26104850)
chr3 (194-294)||(331844-331943)
chr3 (180-227)||(5919465-5919512)
chr3 (180-231)||(22496983-22497034)
chr3 (180-231)||(29222835-29222886)
chr3 (180-259)||(52866446-52866525)
chr3 (180-238)||(3648731-3648789)
chr3 (180-258)||(27224612-27224690)
chr3 (179-257)||(36344404-36344482)
chr3 (180-238)||(37897732-37897790)
chr3 (180-222)||(41253963-41254005)
chr3 (180-257)||(4980304-4980381)
chr3 (180-257)||(4980305-4980382)
chr3 (180-213)||(7882313-7882346)
chr3 (180-233)||(12109888-12109941)
chr3 (183-231)||(6124105-6124153)
chr3 (178-222)||(11582779-11582823)
chr3 (180-224)||(26243743-26243787)
chr3 (180-240)||(27707210-27707270)
chr3 (180-252)||(31706645-31706717)
chr3 (175-207)||(34413202-34413234)
chr3 (180-260)||(47334674-47334754)
[»] chr2 (60 HSPs)
chr2 (180-295)||(15119809-15119923)
chr2 (180-294)||(31101944-31102057)
chr2 (180-261)||(26003467-26003548)
chr2 (180-238)||(1961359-1961417)
chr2 (180-238)||(32630456-32630514)
chr2 (180-257)||(2050121-2050198)
chr2 (180-257)||(31024203-31024280)
chr2 (180-238)||(41805324-41805382)
chr2 (180-261)||(38465821-38465902)
chr2 (180-252)||(15916765-15916837)
chr2 (180-228)||(21488087-21488135)
chr2 (180-260)||(37182844-37182924)
chr2 (180-231)||(800750-800801)
chr2 (180-259)||(31024200-31024279)
chr2 (175-238)||(32473498-32473561)
chr2 (180-246)||(25270898-25270964)
chr2 (187-294)||(26234063-26234169)
chr2 (180-238)||(37195102-37195160)
chr2 (180-246)||(41056930-41056996)
chr2 (180-241)||(3098173-3098234)
chr2 (180-261)||(8740546-8740627)
chr2 (180-213)||(13882758-13882791)
chr2 (180-213)||(13988367-13988400)
chr2 (180-213)||(13994265-13994298)
chr2 (180-213)||(14022883-14022916)
chr2 (175-260)||(43732166-43732251)
chr2 (180-225)||(45473109-45473154)
chr2 (180-240)||(17866228-17866288)
chr2 (179-231)||(23992433-23992485)
chr2 (180-294)||(27331791-27331904)
chr2 (180-240)||(27881269-27881329)
chr2 (177-249)||(33618226-33618298)
chr2 (180-260)||(37182848-37182928)
chr2 (180-294)||(38181792-38181905)
chr2 (180-231)||(11093562-11093613)
chr2 (180-259)||(15119806-15119885)
chr2 (180-289)||(25270888-25270996)
chr2 (179-250)||(25899876-25899947)
chr2 (180-231)||(39102703-39102754)
chr2 (177-240)||(41824290-41824352)
chr2 (179-238)||(42230553-42230612)
chr2 (180-231)||(42530549-42530600)
chr2 (180-258)||(41805306-41805384)
chr2 (180-258)||(43701386-43701464)
chr2 (177-246)||(2544380-2544449)
chr2 (179-252)||(5094871-5094944)
chr2 (180-213)||(8510580-8510613)
chr2 (180-257)||(12242272-12242349)
chr2 (180-261)||(13333479-13333560)
chr2 (180-225)||(21183390-21183435)
chr2 (179-220)||(23962341-23962382)
chr2 (179-220)||(33052210-33052251)
chr2 (180-261)||(41056920-41057001)
chr2 (179-240)||(41153163-41153224)
chr2 (177-238)||(42263044-42263105)
chr2 (180-228)||(2060237-2060285)
chr2 (180-212)||(12242316-12242348)
chr2 (183-231)||(32226636-32226684)
chr2 (180-224)||(38618427-38618471)
chr2 (179-259)||(44274571-44274650)
[»] chr8 (43 HSPs)
chr8 (180-258)||(24287817-24287895)
chr8 (180-294)||(33070197-33070310)
chr8 (180-294)||(11295659-11295772)
chr8 (180-238)||(5888368-5888426)
chr8 (180-257)||(7484648-7484725)
chr8 (180-228)||(2296506-2296554)
chr8 (180-294)||(31810329-31810442)
chr8 (184-238)||(2382622-2382676)
chr8 (180-238)||(13080120-13080178)
chr8 (180-238)||(34580604-34580662)
chr8 (180-260)||(7258617-7258697)
chr8 (179-231)||(25268031-25268083)
chr8 (180-294)||(41387794-41387907)
chr8 (180-259)||(7484649-7484728)
chr8 (180-231)||(9930933-9930984)
chr8 (180-231)||(29360780-29360831)
chr8 (187-261)||(3225807-3225881)
chr8 (179-225)||(9878946-9878992)
chr8 (180-238)||(34326277-34326335)
chr8 (177-246)||(17871805-17871874)
chr8 (180-294)||(24287780-24287893)
chr8 (179-219)||(42749086-42749126)
chr8 (186-294)||(10117008-10117115)
chr8 (180-231)||(13290092-13290143)
chr8 (177-240)||(13964467-13964530)
chr8 (180-239)||(27502933-27502992)
chr8 (179-292)||(28882695-28882807)
chr8 (175-258)||(36916613-36916696)
chr8 (180-238)||(10934653-10934711)
chr8 (190-260)||(17923707-17923777)
chr8 (180-238)||(20546670-20546728)
chr8 (180-238)||(35874515-35874573)
chr8 (180-238)||(40640310-40640368)
chr8 (180-238)||(44319579-44319637)
chr8 (175-240)||(8506265-8506330)
chr8 (179-212)||(13029358-13029391)
chr8 (180-237)||(14700292-14700349)
chr8 (175-228)||(24053624-24053677)
chr8 (180-224)||(2116138-2116182)
chr8 (180-260)||(2296502-2296582)
chr8 (180-240)||(6189682-6189742)
chr8 (179-207)||(13029395-13029423)
chr8 (180-240)||(21435717-21435777)
[»] chr1 (66 HSPs)
chr1 (180-261)||(46829899-46829980)
chr1 (188-257)||(14891778-14891847)
chr1 (181-257)||(14775303-14775379)
chr1 (181-257)||(29663697-29663773)
chr1 (180-260)||(42761481-42761561)
chr1 (180-259)||(41007709-41007788)
chr1 (180-238)||(33765837-33765895)
chr1 (180-238)||(34953928-34953986)
chr1 (180-257)||(3013641-3013718)
chr1 (180-261)||(3549806-3549887)
chr1 (179-252)||(11989340-11989413)
chr1 (180-257)||(38784583-38784660)
chr1 (175-240)||(38834638-38834703)
chr1 (180-240)||(2492508-2492568)
chr1 (179-238)||(38149395-38149454)
chr1 (187-237)||(14890237-14890287)
chr1 (180-238)||(22558913-22558971)
chr1 (180-246)||(24981883-24981949)
chr1 (187-294)||(33939336-33939442)
chr1 (180-250)||(41007715-41007785)
chr1 (180-246)||(46906893-46906959)
chr1 (140-231)||(48083496-48083587)
chr1 (180-213)||(23398451-23398484)
chr1 (179-252)||(28038863-28038936)
chr1 (180-294)||(31130845-31130959)
chr1 (180-257)||(50503214-50503291)
chr1 (180-294)||(6283530-6283643)
chr1 (194-238)||(11324479-11324523)
chr1 (194-238)||(11482500-11482544)
chr1 (180-252)||(29663698-29663770)
chr1 (179-238)||(435237-435296)
chr1 (180-259)||(14967257-14967336)
chr1 (179-238)||(15311522-15311581)
chr1 (179-222)||(29302131-29302174)
chr1 (179-238)||(31327598-31327657)
chr1 (175-238)||(31909799-31909862)
chr1 (177-240)||(36163987-36164049)
chr1 (180-231)||(50550176-50550227)
chr1 (180-238)||(8465976-8466034)
chr1 (180-238)||(9590776-9590834)
chr1 (180-238)||(26674218-26674276)
chr1 (180-258)||(31998221-31998299)
chr1 (180-250)||(35544565-35544635)
chr1 (180-238)||(39362859-39362917)
chr1 (179-252)||(47717-47790)
chr1 (179-212)||(47762-47795)
chr1 (179-212)||(11989385-11989418)
chr1 (175-240)||(15351742-15351807)
chr1 (176-217)||(19580264-19580305)
chr1 (179-240)||(25391866-25391927)
chr1 (179-240)||(44673934-44673994)
chr1 (187-228)||(49586149-49586190)
chr1 (180-260)||(1597217-1597297)
chr1 (180-240)||(6079112-6079171)
chr1 (180-240)||(8984236-8984296)
chr1 (180-260)||(13877017-13877097)
chr1 (180-260)||(23575350-23575430)
chr1 (179-223)||(27936736-27936780)
chr1 (177-217)||(29673875-29673915)
chr1 (180-224)||(36486603-36486646)
chr1 (180-212)||(39075881-39075913)
chr1 (180-212)||(39075949-39075981)
chr1 (180-212)||(39075984-39076016)
chr1 (175-207)||(41621317-41621349)
chr1 (177-209)||(42914565-42914597)
chr1 (180-240)||(43318040-43318100)
[»] chr7 (55 HSPs)
chr7 (180-234)||(37101727-37101781)
chr7 (134-238)||(31319566-31319670)
chr7 (180-238)||(23797380-23797438)
chr7 (180-261)||(10095751-10095832)
chr7 (180-260)||(9555288-9555368)
chr7 (175-222)||(8595174-8595221)
chr7 (180-238)||(4089161-4089219)
chr7 (179-241)||(16777923-16777985)
chr7 (187-261)||(25814721-25814795)
chr7 (180-238)||(33935030-33935088)
chr7 (180-291)||(41803720-41803830)
chr7 (180-295)||(8447749-8447863)
chr7 (180-261)||(28321596-28321676)
chr7 (180-294)||(34275223-34275337)
chr7 (180-224)||(23818456-23818500)
chr7 (179-225)||(2297394-2297440)
chr7 (180-246)||(7701220-7701286)
chr7 (180-238)||(25774232-25774290)
chr7 (180-213)||(5950269-5950302)
chr7 (180-294)||(6455544-6455657)
chr7 (180-257)||(26477193-26477270)
chr7 (180-257)||(26553633-26553710)
chr7 (177-246)||(41890034-41890103)
chr7 (179-223)||(2360480-2360524)
chr7 (186-238)||(4089827-4089879)
chr7 (181-249)||(6250639-6250707)
chr7 (188-294)||(24935887-24935992)
chr7 (180-260)||(26385657-26385737)
chr7 (180-260)||(30138820-30138900)
chr7 (179-246)||(8571413-8571480)
chr7 (179-222)||(12171308-12171351)
chr7 (180-239)||(25245192-25245251)
chr7 (179-238)||(28409603-28409662)
chr7 (180-259)||(31115638-31115717)
chr7 (180-227)||(41404047-41404094)
chr7 (180-238)||(21586846-21586904)
chr7 (180-238)||(25768669-25768727)
chr7 (175-224)||(5689340-5689389)
chr7 (180-261)||(7701215-7701296)
chr7 (179-240)||(8169145-8169205)
chr7 (176-217)||(24617825-24617866)
chr7 (179-240)||(27163213-27163274)
chr7 (177-246)||(28752121-28752190)
chr7 (175-240)||(35216503-35216568)
chr7 (180-225)||(41872114-41872159)
chr7 (179-240)||(43813156-43813217)
chr7 (179-212)||(46648376-46648409)
chr7 (180-224)||(2943244-2943288)
chr7 (180-228)||(4406111-4406159)
chr7 (179-223)||(10422839-10422883)
chr7 (180-240)||(14995913-14995973)
chr7 (180-240)||(18819979-18820039)
chr7 (180-240)||(19688131-19688191)
chr7 (180-232)||(22281860-22281912)
chr7 (202-234)||(29263766-29263798)
[»] chr4 (89 HSPs)
chr4 (180-238)||(21142122-21142180)
chr4 (180-260)||(18626739-18626819)
chr4 (180-259)||(52914027-52914106)
chr4 (180-238)||(40814719-40814777)
chr4 (180-237)||(36072621-36072678)
chr4 (180-257)||(55936018-55936095)
chr4 (180-231)||(32599537-32599588)
chr4 (175-238)||(38298140-38298203)
chr4 (180-259)||(47308146-47308225)
chr4 (180-246)||(34616247-34616313)
chr4 (180-238)||(39235169-39235227)
chr4 (179-252)||(28702097-28702170)
chr4 (179-240)||(46462411-46462472)
chr4 (180-257)||(52914030-52914107)
chr4 (180-294)||(56328444-56328558)
chr4 (180-240)||(2865016-2865076)
chr4 (180-252)||(10572753-10572825)
chr4 (180-260)||(16170938-16171018)
chr4 (182-238)||(18423942-18423998)
chr4 (180-240)||(20598289-20598349)
chr4 (180-252)||(21224721-21224793)
chr4 (180-260)||(27537084-27537164)
chr4 (180-294)||(56328482-56328595)
chr4 (180-259)||(36786179-36786258)
chr4 (180-259)||(39533788-39533867)
chr4 (180-238)||(4406273-4406331)
chr4 (180-238)||(12912641-12912699)
chr4 (180-238)||(23003994-23004052)
chr4 (180-238)||(33694019-33694077)
chr4 (175-237)||(35151688-35151750)
chr4 (180-246)||(38382008-38382074)
chr4 (180-246)||(48402453-48402519)
chr4 (180-238)||(49231328-49231386)
chr4 (180-246)||(56364368-56364434)
chr4 (180-257)||(2582840-2582917)
chr4 (179-252)||(21859518-21859591)
chr4 (179-252)||(21915381-21915454)
chr4 (180-213)||(23568455-23568488)
chr4 (180-261)||(34616242-34616323)
chr4 (180-241)||(39160861-39160922)
chr4 (180-241)||(50371214-50371275)
chr4 (180-213)||(55934672-55934705)
chr4 (180-257)||(55936019-55936096)
chr4 (182-238)||(4484124-4484180)
chr4 (177-217)||(5535743-5535783)
chr4 (180-260)||(24798155-24798235)
chr4 (175-238)||(27628401-27628464)
chr4 (180-259)||(39533785-39533864)
chr4 (180-227)||(52281150-52281197)
chr4 (180-231)||(54931876-54931927)
chr4 (179-241)||(4386370-4386431)
chr4 (180-238)||(5816589-5816647)
chr4 (180-238)||(8826897-8826955)
chr4 (179-225)||(17655082-17655128)
chr4 (180-238)||(19878318-19878376)
chr4 (180-238)||(24133648-24133706)
chr4 (180-238)||(24448715-24448773)
chr4 (180-238)||(46518807-46518865)
chr4 (181-231)||(46803465-46803515)
chr4 (180-246)||(47181591-47181657)
chr4 (175-221)||(47787002-47787048)
chr4 (180-238)||(54057675-54057733)
chr4 (179-252)||(2401071-2401144)
chr4 (180-209)||(12168696-12168725)
chr4 (180-261)||(16468236-16468317)
chr4 (179-252)||(18327965-18328038)
chr4 (179-252)||(18437361-18437434)
chr4 (179-220)||(20787624-20787665)
chr4 (179-220)||(21586986-21587027)
chr4 (179-212)||(21859513-21859546)
chr4 (179-212)||(21915376-21915409)
chr4 (180-237)||(22493627-22493684)
chr4 (179-212)||(28702092-28702125)
chr4 (177-238)||(36469900-36469961)
chr4 (175-259)||(40952377-40952461)
chr4 (180-261)||(56364358-56364439)
chr4 (180-260)||(3511737-3511817)
chr4 (180-252)||(4484106-4484178)
chr4 (175-207)||(6462793-6462825)
chr4 (186-238)||(6974983-6975035)
chr4 (186-238)||(10308290-10308342)
chr4 (180-228)||(21884051-21884099)
chr4 (175-207)||(26636521-26636553)
chr4 (175-207)||(31808403-31808435)
chr4 (179-227)||(31860682-31860730)
chr4 (178-246)||(35967411-35967479)
chr4 (180-260)||(38382004-38382084)
chr4 (180-240)||(54106507-54106567)
chr4 (175-227)||(54508196-54508248)
[»] chr6 (29 HSPs)
chr6 (180-257)||(15517121-15517198)
chr6 (180-257)||(32254853-32254930)
chr6 (180-257)||(34379766-34379843)
chr6 (180-252)||(7158292-7158364)
chr6 (180-259)||(12104777-12104856)
chr6 (180-238)||(14218229-14218287)
chr6 (180-294)||(8145981-8146094)
chr6 (180-257)||(15517122-15517199)
chr6 (180-225)||(26527253-26527298)
chr6 (180-294)||(31398258-31398371)
chr6 (180-240)||(3012408-3012468)
chr6 (180-294)||(28554979-28555092)
chr6 (180-259)||(34379767-34379846)
chr6 (180-238)||(10258336-10258394)
chr6 (180-241)||(6263398-6263459)
chr6 (180-294)||(8145943-8146057)
chr6 (180-228)||(14310581-14310629)
chr6 (180-231)||(3199750-3199801)
chr6 (180-231)||(31996556-31996607)
chr6 (180-259)||(32254850-32254929)
chr6 (180-238)||(13506884-13506942)
chr6 (179-217)||(24111170-24111208)
chr6 (180-294)||(6560689-6560802)
chr6 (180-221)||(11745956-11745997)
chr6 (179-240)||(14173421-14173482)
chr6 (179-240)||(14177957-14178018)
chr6 (181-238)||(2157588-2157647)
chr6 (180-260)||(2827587-2827667)
chr6 (177-217)||(6797439-6797479)
[»] chr5 (49 HSPs)
chr5 (180-294)||(18033387-18033500)
chr5 (180-260)||(22650888-22650968)
chr5 (180-258)||(1100089-1100167)
chr5 (180-238)||(31963551-31963609)
chr5 (180-260)||(3100437-3100517)
chr5 (183-295)||(26141749-26141860)
chr5 (180-238)||(25773275-25773333)
chr5 (179-257)||(27314506-27314584)
chr5 (180-238)||(38370419-38370477)
chr5 (180-260)||(1100085-1100165)
chr5 (182-294)||(71254-71364)
chr5 (180-234)||(16602241-16602295)
chr5 (179-225)||(16899750-16899796)
chr5 (180-246)||(17625672-17625738)
chr5 (179-225)||(25772218-25772264)
chr5 (177-238)||(566322-566383)
chr5 (186-259)||(11795765-11795838)
chr5 (179-260)||(14274162-14274243)
chr5 (180-294)||(5259417-5259530)
chr5 (180-240)||(25408575-25408635)
chr5 (180-260)||(35032302-35032382)
chr5 (179-222)||(1996878-1996921)
chr5 (179-238)||(4162834-4162893)
chr5 (177-240)||(12922401-12922464)
chr5 (175-246)||(15062327-15062398)
chr5 (177-220)||(22474006-22474049)
chr5 (180-231)||(30371365-30371416)
chr5 (175-238)||(30489123-30489186)
chr5 (180-231)||(37067644-37067695)
chr5 (180-231)||(41005700-41005751)
chr5 (180-231)||(43438312-43438363)
chr5 (180-246)||(11795768-11795834)
chr5 (180-218)||(18652835-18652873)
chr5 (175-237)||(31927087-31927149)
chr5 (179-221)||(32911559-32911601)
chr5 (180-238)||(36169093-36169151)
chr5 (179-252)||(5226055-5226128)
chr5 (180-213)||(8042639-8042672)
chr5 (180-261)||(17625667-17625748)
chr5 (180-241)||(18254736-18254797)
chr5 (180-233)||(36897774-36897827)
chr5 (177-238)||(43176280-43176341)
chr5 (180-252)||(5089485-5089557)
chr5 (179-207)||(6114819-6114847)
chr5 (177-217)||(10495240-10495280)
chr5 (180-228)||(20518203-20518251)
chr5 (180-224)||(28518786-28518830)
chr5 (175-207)||(42486185-42486217)
chr5 (179-207)||(43506175-43506203)
[»] scaffold0009 (3 HSPs)
scaffold0009 (180-238)||(146000-146058)
scaffold0009 (180-230)||(216331-216381)
scaffold0009 (180-261)||(7689-7770)
[»] scaffold0065 (2 HSPs)
scaffold0065 (180-241)||(39156-39217)
scaffold0065 (179-259)||(36885-36965)
[»] scaffold0110 (2 HSPs)
scaffold0110 (177-232)||(10143-10198)
scaffold0110 (177-232)||(17880-17935)
[»] scaffold0149 (1 HSPs)
scaffold0149 (180-224)||(24670-24714)
[»] scaffold0036 (1 HSPs)
scaffold0036 (180-260)||(89630-89710)
[»] scaffold0340 (1 HSPs)
scaffold0340 (179-238)||(14083-14142)
[»] scaffold0321 (1 HSPs)
scaffold0321 (175-238)||(1660-1723)
[»] scaffold1640 (1 HSPs)
scaffold1640 (180-238)||(1169-1227)
[»] scaffold0029 (2 HSPs)
scaffold0029 (180-246)||(15824-15890)
scaffold0029 (186-246)||(41283-41343)
[»] scaffold0002 (1 HSPs)
scaffold0002 (177-238)||(491879-491940)
[»] scaffold0020 (1 HSPs)
scaffold0020 (180-224)||(139360-139404)
[»] scaffold0014 (1 HSPs)
scaffold0014 (179-227)||(133168-133216)


Alignment Details
Target: chr3 (Bit Score: 140; Significance: 2e-73; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 54690667 - 54690976
Alignment:
Q  1 ctcaaaaggtcttataattaaggattcttgttcctctaaga---atatcaatatcagtat-------tgttcacacgtgcaaatgagttgtgtttaataa 90  Q
    |||||||||||||||||||||| ||||||||||||||||||   |||| | || ||| ||       |||||||||||||| ||||||||||||||||||    
T  54690667 ctcaaaaggtcttataattaagaattcttgttcctctaagagagatatgactagcagaatatcaatttgttcacacgtgcagatgagttgtgtttaataa 54690766  T
Q  91 aattagagtgcgttgatggtgaagcatttccgttgaaaatgtcttaataatatacaccttctggtcactattataggnnnnnnnttattttttagattca 190  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| || ||||||||| |       ||||||||||||||||    
T  54690767 aattagagtgcgttgatggtgaagcatttccgttgaaaatgtcctaataatatacatcttctcgttactattataagaaaaaaattattttttagattca 54690866  T
Q  191 ttcattaaatgatgtatatagtttataataaagaccatatatatcat-----ttaacgaataaatcttaaatgtagnnnnnnngcttataatagtgaccg 285  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||     | |   ||| ||||||||||||||       |||||||||||||||||    
T  54690867 ttcattaaatgatgtatatggtttataataaagaccatatatatcatatatatcattaaatgaatcttaaatgtagtttttttgcttataatagtgaccg 54690966  T
Q  286 gagggtgtaa 295  Q
    ||||||||||    
T  54690967 gagggtgtaa 54690976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 259
Target Start/End: Original strand, 52866449 - 52866528
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgt 259  Q
    |||||||||||||||||||||||||||| | || |||||||||||  |||||||| |||||| |||| ||||| ||||||    
T  52866449 ttttagattcattcattaaatgatgtatgtggtctataataaagattatatatattatttaatgaatgaatctaaaatgt 52866528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 291
Target Start/End: Complemental strand, 12745009 - 12744899
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtagnnnnnnngcttataatag 279  Q
    |||||||| ||||||||||||||||||| | || |||||||||||||||||| |||||| |  |||| ||||| |||||||        |||||||||||    
T  12745009 ttttagatacattcattaaatgatgtatgtggtctataataaagaccatatacatcattaattgaatgaatctaaaatgta-agtttttgcttataatag 12744911  T
Q  280 tgaccggagggt 291  Q
    ||||||||||||    
T  12744910 tgaccggagggt 12744899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 19810998 - 19810940
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||| |||||||||||||||||||||| | ||||||||||||||||||||| ||||||    
T  19810998 ttttaaattcattcattaaatgatgtatgtggtttataataaagaccatatacatcatt 19810940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 41743622 - 41743680
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    |||||||||| ||||||||||||||||||| || |||||||||||||||||| ||||||    
T  41743622 ttttagattcgttcattaaatgatgtatatggtctataataaagaccatatacatcatt 41743680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 180 - 294
Target Start/End: Original strand, 10872704 - 10872817
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtagnnnnnnngcttataatag 279  Q
    ||||| |||||||||||||||||||||| |  |||||||||||||||||||| |||||| |  |||| ||||| |||| ||        |||||||||||    
T  10872704 ttttaaattcattcattaaatgatgtatgtgatttataataaagaccatatacatcattaattgaatgaatctaaaatata-aatttttgcttataatag 10872802  T
Q  280 tgaccggagggtgta 294  Q
    |||||||||||||||    
T  10872803 tgaccggagggtgta 10872817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 54595822 - 54595899
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaat 257  Q
    |||||||||||||||||||||||||||| | ||  ||||||||||| ||||| ||||||||| |||| ||||| ||||    
T  54595822 ttttagattcattcattaaatgatgtatgtggtcgataataaagacgatatacatcatttaatgaatgaatctaaaat 54595899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 294
Target Start/End: Complemental strand, 27224688 - 27224575
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtagnnnnnnngcttataatag 279  Q
    ||||||||| ||||||||||||||||||||| ||| || || ||| || ||| ||||||||| |||||||||| |||||| |       | |||||||||    
T  27224688 ttttagattgattcattaaatgatgtatataatttttattatagatcacatacatcatttaatgaataaatctaaaatgttg-atttttgtttataatag 27224590  T
Q  280 tgaccggagggtgta 294  Q
    |||||||||||||||    
T  27224589 tgaccggagggtgta 27224575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 26121647 - 26121589
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||||| |||||||||||||||||| | || |||||||||||||||||| ||||||    
T  26121647 ttttagatttattcattaaatgatgtatgtggtctataataaagaccatatacatcatt 26121589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 26244488 - 26244430
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||||| |||||||||||||||||| | || |||||||||||||||||| ||||||    
T  26244488 ttttagatttattcattaaatgatgtatgtggtctataataaagaccatatacatcatt 26244430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 40065357 - 40065411
Alignment:
Q  184 agattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||||||||| |||||||||| |||| |||||||||||||||||| ||||||    
T  40065357 agattcattcattgaatgatgtatgtagtatataataaagaccatatacatcatt 40065411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 40470527 - 40470454
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatct 252  Q
    |||||||||||||||||||||||| |||| |||| |||||||||||| | |||  |||||||| |||| |||||    
T  40470527 tttttagattcattcattaaatgacgtatgtagtctataataaagactacatacgtcatttaatgaatgaatct 40470454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 225
Target Start/End: Original strand, 48191747 - 48191792
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagac 225  Q
    |||||||||||||||||||||||||||| | |||||||||||||||    
T  48191747 ttttagattcattcattaaatgatgtatgtggtttataataaagac 48191792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 21217198 - 21217270
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatct 252  Q
    ||||||||||||||||||||||||||||   |||||||||| |||| | ||| ||||||||| ||||| ||||    
T  21217198 ttttagattcattcattaaatgatgtatgcggtttataatacagactacatacatcatttaatgaatatatct 21217270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 186 - 246
Target Start/End: Original strand, 44382850 - 44382910
Alignment:
Q  186 attcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaat 246  Q
    |||||||||||||||||||||| | |||||||||| |||| | ||||||||||||| ||||    
T  44382850 attcattcattaaatgatgtatgtggtttataatacagactacatatatcatttaatgaat 44382910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 259
Target Start/End: Original strand, 7823899 - 7823978
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgt 259  Q
    ||||||||||||| |||||||||||||| |  | |||||||| ||||||||| ||||||||| | || ||||| ||||||    
T  7823899 ttttagattcatttattaaatgatgtatttgatctataataatgaccatatacatcatttaatggatgaatctaaaatgt 7823978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 259
Target Start/End: Complemental strand, 54595898 - 54595819
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgt 259  Q
    |||||||||||||||||||||||||||||| || | || ||  ||||| ||| ||||||||| |||| ||||| ||||||    
T  54595898 ttttagattcattcattaaatgatgtatatcgtctttattatcgaccacatacatcatttaatgaatgaatctaaaatgt 54595819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 250
Target Start/End: Complemental strand, 331906 - 331836
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaat 250  Q
    ||||||||||||||||||||||||||||||| | | || || |||||| ||| |||||||||  |||||||    
T  331906 ttttagattcattcattaaatgatgtatataatctttattatagaccacatacatcatttaatcaataaat 331836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 260
Target Start/End: Complemental strand, 14756498 - 14756436
Alignment:
Q  198 aatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgta 260  Q
    |||||||||| | || |||||||||||||||||| |||||| || |||||||||| |||||||    
T  14756498 aatgatgtatgtggtctataataaagaccatatacatcattaaatgaataaatctaaaatgta 14756436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 258
Target Start/End: Original strand, 26121571 - 26121649
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatg 258  Q
    ||||||||||||||| | |||||||||||| || | || || |||||| ||| ||||||||| |||||||||| |||||    
T  26121571 ttttagattcattcaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaataaatctaaaatg 26121649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 258
Target Start/End: Original strand, 26244412 - 26244490
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatg 258  Q
    ||||||||||||||| | |||||||||||| || | || || |||||| ||| ||||||||| |||||||||| |||||    
T  26244412 ttttagattcattcaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaataaatctaaaatg 26244490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 34327616 - 34327558
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||||||||||||||||||||||||||  |||||||| || | |||||| ||||||    
T  34327616 ttttagattcattcattaaatgatgtatatgatttataatcaaaatcatatacatcatt 34327558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 37807542 - 37807600
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||| ||| ||||||| |||||||||| | ||||||||||||||||||||| ||||||    
T  37807542 ttttaaatttattcattgaatgatgtatgtggtttataataaagaccatatacatcatt 37807600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 294
Target Start/End: Complemental strand, 38677666 - 38677560
Alignment:
Q  187 ttcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtagnnnnnnngcttataatagtgaccgg 286  Q
    |||||||||| |||||||||| | || ||||||||||||||| |  |||||| || |||| ||||| |||||||        ||||||||||||||||||    
T  38677666 ttcattcatttaatgatgtatgtggtctataataaagaccatgtgcatcattaaatgaatgaatctaaaatgta-aacttttgcttataatagtgaccgg 38677568  T
Q  287 agggtgta 294  Q
    ||||||||    
T  38677567 agggtgta 38677560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 47334750 - 47334692
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||||||||||||||||||||||||||  | ||||||||| | |||||| ||||||    
T  47334750 ttttagattcattcattaaatgatgtatatgatctataataaaaatcatatacatcatt 47334692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 241
Target Start/End: Original strand, 9170144 - 9170205
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaa 241  Q
    |||||||||||||| ||||||||||||  | |||||||||||||||||  || |||||||||    
T  9170144 ttttagattcattcgttaaatgatgtacgtggtttataataaagaccacgtacatcatttaa 9170205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 30578254 - 30578331
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaat 257  Q
    |||| |||||| |||||||||||||||||| ||  |||||||||||  |||| ||||||||| |||| ||||| ||||    
T  30578254 tttttgattcactcattaaatgatgtatatggtcaataataaagactgtatacatcatttaatgaatgaatctaaaat 30578331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 241
Target Start/End: Complemental strand, 30578330 - 30578269
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaa 241  Q
    ||||||||||||||||||||||||||||| ||| | || ||  ||||||||| |||||||||    
T  30578330 ttttagattcattcattaaatgatgtatacagtctttattattgaccatatacatcatttaa 30578269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 238
Target Start/End: Original strand, 45736720 - 45736777
Alignment:
Q  181 tttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||||||||||||||||||||||| | || ||||||||||| ||| || ||||||    
T  45736720 tttagattcattcattaaatgatgtatgtggtctataataaagatcatgtacatcatt 45736777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 237
Target Start/End: Complemental strand, 52215988 - 52215931
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcat 237  Q
    ||||||||||| |||||||||||||||| | || ||||||||||| |||||| |||||    
T  52215988 ttttagattcactcattaaatgatgtatgtggtctataataaagatcatatacatcat 52215931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 259
Target Start/End: Original strand, 23444316 - 23444384
Alignment:
Q  191 ttcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgt 259  Q
    |||||||||| |||||| | ||| ||||||||||| ||||| ||||||||| |||| ||||| ||||||    
T  23444316 ttcattaaattatgtatgtggttaataataaagactatatacatcatttaatgaatgaatctaaaatgt 23444384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 23444381 - 23444349
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagt 212  Q
    |||||||||||||||||||||||||||||||||    
T  23444381 ttttagattcattcattaaatgatgtatatagt 23444349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 24369134 - 24369178
Alignment:
Q  176 tattttttagattcattcattaaatgatgtatatagtttataata 220  Q
    ||||||||||||||||||| ||||| |||||||| ||||||||||    
T  24369134 tattttttagattcattcaataaataatgtatattgtttataata 24369178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 294
Target Start/End: Complemental strand, 25881244 - 25881131
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtagnnnnnnngcttataatag 279  Q
    |||||| |||||||||| |||||||||| | || ||||||||||||||| |  |||||| || |||| || || ||||||||       ||||||| |||    
T  25881244 ttttaggttcattcatttaatgatgtatgtggtctataataaagaccatgtgcatcattaaatgaatgaacctaaaatgtag-ttttttgcttatattag 25881146  T
Q  280 tgaccggagggtgta 294  Q
    |||||||||||||||    
T  25881145 tgaccggagggtgta 25881131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 26104806 - 26104850
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaaga 224  Q
    |||||| |||||||||| ||||||||||||||| |||||||||||    
T  26104806 ttttaggttcattcatttaatgatgtatatagtctataataaaga 26104850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 294
Target Start/End: Original strand, 331844 - 331943
Alignment:
Q  194 attaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtagnnnnnnngcttataatagtgaccggagggtgt 293  Q
    |||||||||||||| | || |||||||||||  ||||| ||||||||| |||| ||||| ||||||         |||||||||||||||||||||||||    
T  331844 attaaatgatgtatgtggtctataataaagattatatacatcatttaatgaatgaatctaaaatgt-taatttttgcttataatagtgaccggagggtgt 331942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 227
Target Start/End: Original strand, 5919465 - 5919512
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagacca 227  Q
    ||||||||||||||| |||||||||||| | ||||| |||||||||||    
T  5919465 ttttagattcattcaataaatgatgtatgttgtttacaataaagacca 5919512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 22496983 - 22497034
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatata 231  Q
    |||||||||||||||||||||||||||| | || ||| |||||||| |||||    
T  22496983 ttttagattcattcattaaatgatgtatgtggtctatgataaagacaatata 22497034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 29222835 - 29222886
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatata 231  Q
    ||||||||||||| |||||||||||||| | || ||||||||||| ||||||    
T  29222835 ttttagattcatttattaaatgatgtatgttgtctataataaagatcatata 29222886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 259
Target Start/End: Complemental strand, 52866525 - 52866446
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgt 259  Q
    ||||||||||||||||||||| || |||||| | | || || |||||| ||| ||||||||| |||| ||||| ||||||    
T  52866525 ttttagattcattcattaaataatatatataatctttattatagaccacatacatcatttaatgaatgaatctaaaatgt 52866446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 3648731 - 3648789
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||||| ||||| | |||||||||||| || |||||||||||| ||||| ||||||    
T  3648731 ttttagatttattcaattaatgatgtatattgtctataataaagactatatacatcatt 3648789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 258
Target Start/End: Original strand, 27224612 - 27224690
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatg 258  Q
    ||||||||| |||||||||||||||||| |  | ||||||||| |  ||||| ||||||||| |||| ||||| |||||    
T  27224612 ttttagatttattcattaaatgatgtatgtgatctataataaaaattatatacatcatttaatgaatcaatctaaaatg 27224690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 257
Target Start/End: Original strand, 36344404 - 36344482
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaat 257  Q
    |||||||||||| |||||||||||| ||| |  |  ||||||||||||| ||| ||||||||| |||| ||||| ||||    
T  36344404 tttttagattcaatcattaaatgatatatgtgatcaataataaagaccacatacatcatttaatgaatgaatctaaaat 36344482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 37897790 - 37897732
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||| ||||||||||||||| |||||| | || ||||||||||| |||||| ||||||    
T  37897790 ttttaaattcattcattaaattatgtatgtggtctataataaagatcatatacatcatt 37897732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 41253963 - 41254005
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaa 222  Q
    ||||| |||||||||||||||||||||| | ||||||||||||    
T  41253963 ttttatattcattcattaaatgatgtatgtggtttataataaa 41254005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 257
Target Start/End: Complemental strand, 4980381 - 4980304
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaat 257  Q
    ||||||||||||||| |||||||||||| |||| | || || |||| | ||||||||||||  |||| ||||| ||||    
T  4980381 ttttagattcattcaataaatgatgtatgtagtctttattatagacaacatatatcatttattgaatgaatctaaaat 4980304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 4980305 - 4980382
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaat 257  Q
    ||||||||||||||| |||||||| ||| | || |||||||||||| | ||| ||||||||  |||| ||||| ||||    
T  4980305 ttttagattcattcaataaatgatatatgttgtctataataaagactacatacatcatttattgaatgaatctaaaat 4980382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 213
Target Start/End: Original strand, 7882313 - 7882346
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtt 213  Q
    ||||||||||||| ||||||||||||||||||||    
T  7882313 ttttagattcattaattaaatgatgtatatagtt 7882346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 12109941 - 12109888
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatata 233  Q
    |||||| |||||||||||| |||||||| | || ||||||||||| ||||||||    
T  12109941 ttttagtttcattcattaattgatgtatgtggtctataataaagatcatatata 12109888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 231
Target Start/End: Original strand, 6124105 - 6124153
Alignment:
Q  183 tagattcattcattaaatgatgtatatagtttataataaagaccatata 231  Q
    |||||||||||||||||||||||||||  | ||||| |||||| |||||    
T  6124105 tagattcattcattaaatgatgtatatgatgtataaaaaagactatata 6124153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 222
Target Start/End: Original strand, 11582779 - 11582823
Alignment:
Q  178 ttttttagattcattcattaaatgatgtatatagtttataataaa 222  Q
    |||||||| |||||||||| |||||||||| | ||||||||||||    
T  11582779 ttttttaggttcattcatttaatgatgtatgtggtttataataaa 11582823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 26243787 - 26243743
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaaga 224  Q
    ||||||||| |||||||||||||||||| | || |||||||||||    
T  26243787 ttttagatttattcattaaatgatgtatgtggtctataataaaga 26243743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 27707210 - 27707270
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcattta 240  Q
    ||||| ||||||||| |||||||| ||||| || || ||||||||||| ||| ||||||||    
T  27707210 ttttaaattcattcaataaatgatatatattgtctacaataaagaccacatacatcattta 27707270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 31706645 - 31706717
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatct 252  Q
    ||||||||||||||| || ||||||||| | || || ||||||||||| ||| ||| ||||  ||||||||||    
T  31706645 ttttagattcattcaatatatgatgtatgttgtctacaataaagaccacatacatcgtttattgaataaatct 31706717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 207
Target Start/End: Complemental strand, 34413234 - 34413202
Alignment:
Q  175 ttattttttagattcattcattaaatgatgtat 207  Q
    |||||||||||||||||||||| ||||||||||    
T  34413234 ttattttttagattcattcatttaatgatgtat 34413202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 260
Target Start/End: Original strand, 47334674 - 47334754
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgta 260  Q
    ||||| ||||||||| | ||||||||||||  ||| || || ||| |||||| ||||||||| |||| ||||| |||||||    
T  47334674 ttttaaattcattcaattaatgatgtatatgatttttattatagatcatatacatcatttaatgaatgaatctaaaatgta 47334754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 180 - 295
Target Start/End: Original strand, 15119809 - 15119923
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtagnnnnnnngcttataatag 279  Q
    |||||||||||||||||||||||||||| | || |||||||||||| ||||| |||||| || |||||||||| ||||||||       |||||||||||    
T  15119809 ttttagattcattcattaaatgatgtatgtggtctataataaagacaatatacatcattaaatgaataaatctaaaatgtag-atttttgcttataatag 15119907  T
Q  280 tgaccggagggtgtaa 295  Q
    ||||||||||||||||    
T  15119908 tgaccggagggtgtaa 15119923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 180 - 294
Target Start/End: Complemental strand, 31102057 - 31101944
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtagnnnnnnngcttataatag 279  Q
    |||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||| | ||||| ||||| ||||| |        |||||||||||    
T  31102057 ttttagattcattcattaaatgatgtatgtggtttataataaagatcatatatatcattaaccgaatgaatctaaaatgca-aacatttgcttataatag 31101959  T
Q  280 tgaccggagggtgta 294  Q
    |||||||||||||||    
T  31101958 tgaccggagggtgta 31101944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 180 - 261
Target Start/End: Original strand, 26003467 - 26003548
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtag 261  Q
    |||||| ||||||||||||||||||||| |||| |||||||||||||||||| |||||| |  |||| ||||| ||||||||    
T  26003467 ttttaggttcattcattaaatgatgtatgtagtatataataaagaccatatacatcattaattgaatgaatctaaaatgtag 26003548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 1961417 - 1961359
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    |||||||||||||||||||||||||||| | || |||||||||||||||||| ||||||    
T  1961417 ttttagattcattcattaaatgatgtatgtggtctataataaagaccatatacatcatt 1961359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 32630514 - 32630456
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||||| |||||||||||||||||| |||| |||||||||||||||||| ||||||    
T  32630514 ttttagatttattcattaaatgatgtatgtagtctataataaagaccatatacatcatt 32630456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 180 - 257
Target Start/End: Complemental strand, 2050198 - 2050121
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaat 257  Q
    ||||||||||||| |||||||||||||| | |||||||||||||| |||||| |||||| ||  ||||||||| ||||    
T  2050198 ttttagattcatttattaaatgatgtatgtggtttataataaagatcatatacatcattaaataaataaatctaaaat 2050121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 31024203 - 31024280
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaat 257  Q
    |||||||||||||||||||||||||||| | ||  ||||||||||| ||||| ||||||||| |||| ||||| ||||    
T  31024203 ttttagattcattcattaaatgatgtatgtggtcgataataaagacgatatacatcatttaatgaatgaatctaaaat 31024280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 41805382 - 41805324
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||||||| |||||||||||||||||| || |||||||||||| ||||| ||||||    
T  41805382 ttttagattcactcattaaatgatgtatatggtctataataaagactatatacatcatt 41805324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 261
Target Start/End: Original strand, 38465821 - 38465902
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtag 261  Q
    ||||||||| |||||||||||||||||| | ||  ||||||||||||||||| |||||| |  |||| ||||| ||||||||    
T  38465821 ttttagattaattcattaaatgatgtatgtggtccataataaagaccatatacatcattaattgaatgaatctaaaatgtag 38465902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 15916765 - 15916837
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatct 252  Q
    ||||||||||||||||||||| |||||| |||| ||||| ||||| |||||| |||||| |  ||||||||||    
T  15916765 ttttagattcattcattaaataatgtatgtagtctataacaaagatcatatacatcattaattgaataaatct 15916837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 21488135 - 21488087
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccat 228  Q
    ||||||||||||||||| |||||||||| | ||||||||||||||||||    
T  21488135 ttttagattcattcatttaatgatgtatgtggtttataataaagaccat 21488087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 260
Target Start/End: Complemental strand, 37182924 - 37182844
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgta 260  Q
    ||||| |||||||||||||||||||||| | || |||||||||| | ||||| |||||||||  ||| ||||| |||||||    
T  37182924 ttttaaattcattcattaaatgatgtatgtggtctataataaaggctatatacatcatttaattaatgaatctaaaatgta 37182844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 800801 - 800750
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatata 231  Q
    ||||| |||||||||||||||||||||||| |||||||||||| | ||||||    
T  800801 ttttaaattcattcattaaatgatgtatatggtttataataaaaatcatata 800750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 259
Target Start/End: Complemental strand, 31024279 - 31024200
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgt 259  Q
    |||||||||||||||||||||||||||||| || | || ||  ||||| ||| ||||||||| |||| ||||| ||||||    
T  31024279 ttttagattcattcattaaatgatgtatatcgtctttattatcgaccacatacatcatttaatgaatgaatctaaaatgt 31024200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 238
Target Start/End: Original strand, 32473498 - 32473561
Alignment:
Q  175 ttattttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    |||||||||||||||||||| | |||||||||| | ||| |||||| |||||| ||||||||||    
T  32473498 ttattttttagattcattcaattaatgatgtatgtggttcataatatagaccacatatatcatt 32473561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 25270964 - 25270898
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaat 246  Q
    ||||||||||||||||||||||||||||   |||||||||| |||| | ||| ||||||||| ||||    
T  25270964 ttttagattcattcattaaatgatgtatgcggtttataatacagactacatacatcatttaatgaat 25270898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 294
Target Start/End: Original strand, 26234063 - 26234169
Alignment:
Q  187 ttcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtagnnnnnnngcttataatagtgaccgg 286  Q
    |||||||||| |||||||||| | || ||||||||||||||| |  |||||| || |||| ||||| |||||||        ||||||||||||||||||    
T  26234063 ttcattcatttaatgatgtatgtggtctataataaagaccatgtgcatcattaaatgaatgaatctaaaatgta-aacttttgcttataatagtgaccgg 26234161  T
Q  287 agggtgta 294  Q
    ||||||||    
T  26234162 agggtgta 26234169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 37195160 - 37195102
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    |||| ||||| ||||||||||||||||| | || |||||||||||||||||| ||||||    
T  37195160 tttttgattctttcattaaatgatgtatgtggtctataataaagaccatatacatcatt 37195102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 41056996 - 41056930
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaat 246  Q
    ||||||||||||||||||||||||||||   |||||||||| |||| | ||| ||||||||| ||||    
T  41056996 ttttagattcattcattaaatgatgtatgcggtttataatacagactacatacatcatttaatgaat 41056930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 241
Target Start/End: Complemental strand, 3098234 - 3098173
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaa 241  Q
    ||||||||||||||||||||||||||||   |||||||||| |||| | ||| |||||||||    
T  3098234 ttttagattcattcattaaatgatgtatgcggtttataatacagactacatacatcatttaa 3098173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 261
Target Start/End: Complemental strand, 8740627 - 8740546
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtag 261  Q
    |||||| |||||||||| |||||||||| | || ||||||||||||||| |  |||||| || |||| ||||| ||||||||    
T  8740627 ttttaggttcattcatttaatgatgtatgtggtctataataaagaccatgtgcatcattaaatgaatgaatctaaaatgtag 8740546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 213
Target Start/End: Complemental strand, 13882791 - 13882758
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtt 213  Q
    ||||||||||||||||||||||||||||||||||    
T  13882791 ttttagattcattcattaaatgatgtatatagtt 13882758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 213
Target Start/End: Complemental strand, 13988400 - 13988367
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtt 213  Q
    ||||||||||||||||||||||||||||||||||    
T  13988400 ttttagattcattcattaaatgatgtatatagtt 13988367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 213
Target Start/End: Complemental strand, 13994298 - 13994265
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtt 213  Q
    ||||||||||||||||||||||||||||||||||    
T  13994298 ttttagattcattcattaaatgatgtatatagtt 13994265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 213
Target Start/End: Complemental strand, 14022916 - 14022883
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtt 213  Q
    ||||||||||||||||||||||||||||||||||    
T  14022916 ttttagattcattcattaaatgatgtatatagtt 14022883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 260
Target Start/End: Complemental strand, 43732251 - 43732166
Alignment:
Q  175 ttattttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgta 260  Q
    |||| |||||||||||||||||||||||||||| | || ||| |||| ||||||||  |||||| |  |||| ||||| |||||||    
T  43732251 ttatattttagattcattcattaaatgatgtatgtggtatatgataatgaccatattcatcattaattgaatgaatctaaaatgta 43732166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 225
Target Start/End: Original strand, 45473109 - 45473154
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagac 225  Q
    |||||||||||||||||||||||||||| | || ||||||||||||    
T  45473109 ttttagattcattcattaaatgatgtatgttgtctataataaagac 45473154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 17866288 - 17866228
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcattta 240  Q
    ||||||||||||||| ||||| |||||| | ||||| ||||||||||| ||| ||||||||    
T  17866288 ttttagattcattcaataaattatgtatgttgtttacaataaagaccacatacatcattta 17866228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 23992485 - 23992433
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagaccatata 231  Q
    ||||||||||| |||||||||||| |||| |||| |||||||||||| |||||    
T  23992485 tttttagattcgttcattaaatgacgtatgtagtctataataaagactatata 23992433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 294
Target Start/End: Original strand, 27331791 - 27331904
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtagnnnnnnngcttataatag 279  Q
    ||||| ||||||||||||||| || ||||| ||||||||||||||| | ||| |||||| |  |||| ||||| |||||| |       |||||||||||    
T  27331791 ttttaaattcattcattaaataatatatattgtttataataaagactacatacatcattaattgaatgaatctaaaatgttg-atttttgcttataatag 27331889  T
Q  280 tgaccggagggtgta 294  Q
    |||||||||| ||||    
T  27331890 tgaccggaggatgta 27331904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 27881269 - 27881329
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcattta 240  Q
    ||||| ||||||||| |||||||||||| | ||||| |||||| |||| ||||||||||||    
T  27881269 ttttatattcattcaataaatgatgtatgttgtttacaataaataccacatatatcattta 27881329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 249
Target Start/End: Original strand, 33618226 - 33618298
Alignment:
Q  177 attttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaa 249  Q
    ||||||||| |||||||||| |||||||||||| ||| |||||| |||| | ||| |||||| || |||||||    
T  33618226 attttttaggttcattcatttaatgatgtatatggttcataatatagactacatacatcattaaatgaataaa 33618298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 260
Target Start/End: Original strand, 37182848 - 37182928
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgta 260  Q
    ||||||||||||| ||||||||||||||||||  | || || |||||| ||| ||||||||| |||| ||| | |||||||    
T  37182848 ttttagattcattaattaaatgatgtatatagcctttattatagaccacatacatcatttaatgaatgaatttaaaatgta 37182928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 294
Target Start/End: Original strand, 38181792 - 38181905
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtagnnnnnnngcttataatag 279  Q
    |||||||||||||||||||||||||||| |  | || ||||||||| ||||| |||||| |  |||| ||| | ||||||||       |||||||||||    
T  38181792 ttttagattcattcattaaatgatgtatgtgatctacaataaagactatatacatcattaattgaatgaatgtaaaatgtag-ttttttgcttataatag 38181890  T
Q  280 tgaccggagggtgta 294  Q
    | |||||||||||||    
T  38181891 taaccggagggtgta 38181905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 11093562 - 11093613
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatata 231  Q
    ||||||||| |||||||||||||||||| | || |||||||||||| |||||    
T  11093562 ttttagattgattcattaaatgatgtatgtggtctataataaagactatata 11093613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 259
Target Start/End: Complemental strand, 15119885 - 15119806
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgt 259  Q
    ||||||||| ||||||| |||||||||||| || | || || |||||| ||| ||||||||| |||| ||||| ||||||    
T  15119885 ttttagatttattcatttaatgatgtatattgtctttattatagaccacatacatcatttaatgaatgaatctaaaatgt 15119806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 289
Target Start/End: Original strand, 25270888 - 25270996
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtagnnnnnnngcttataatag 279  Q
    |||||||| ||||||||||||||||||| |||| | || || | |||  ||| ||||||||| |||| ||||| ||||||||       |||||||||||    
T  25270888 ttttagatacattcattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaatctaaaatgtag-atttttgcttataatag 25270986  T
Q  280 tgaccggagg 289  Q
    ||||||||||    
T  25270987 tgaccggagg 25270996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 250
Target Start/End: Complemental strand, 25899947 - 25899876
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaat 250  Q
    |||||||||| ||| ||||||||| |||| ||||||||||||||||| | |||  ||||||||  |||||||    
T  25899947 tttttagatttatttattaaatgacgtatgtagtttataataaagactacatacgtcatttaataaataaat 25899876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 39102703 - 39102754
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatata 231  Q
    ||||||||||||| || || |||||||||| |||||||||||||||| ||||    
T  39102703 ttttagattcatttatcaagtgatgtatatggtttataataaagaccttata 39102754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 240
Target Start/End: Original strand, 41824290 - 41824352
Alignment:
Q  177 attttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcattta 240  Q
    |||||||||||||||||| ||||| |||||| |||||||| ||| |||||| ||| ||||||||    
T  41824290 attttttagattcattcaataaattatgtatgtagtttat-atatagaccacatacatcattta 41824352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 238
Target Start/End: Original strand, 42230553 - 42230612
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    |||||||||||||||||| |||||||||| | ||||||||||  ||||| ||| ||||||    
T  42230553 tttttagattcattcatttaatgatgtatgtggtttataatatggaccacatacatcatt 42230612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 42530600 - 42530549
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatata 231  Q
    ||||| |||||||||||||| ||||||||| || ||||||||||||| ||||    
T  42530600 ttttacattcattcattaaacgatgtatattgtctataataaagaccgtata 42530549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 258
Target Start/End: Original strand, 41805306 - 41805384
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatg 258  Q
    ||||| ||||||||| | ||||||||||||||| | || || |||||||||| ||||||||| || | ||||| |||||    
T  41805306 ttttaaattcattcaattaatgatgtatatagtctttattatagaccatatacatcatttaatgagtgaatctaaaatg 41805384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 258
Target Start/End: Original strand, 43701386 - 43701464
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatg 258  Q
    |||||||||||||||||||||||||| |||    || |||||| |||||||| |||||| |  |||||||||| |||||    
T  43701386 ttttagattcattcattaaatgatgtgtatgacctacaataaaaaccatatacatcattaattgaataaatctaaaatg 43701464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 2544380 - 2544449
Alignment:
Q  177 attttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaat 246  Q
    ||||||||||||||||||||||||||  ||| | ||  |||||| |||||| ||| ||||||||| ||||    
T  2544380 attttttagattcattcattaaatgacttatttggtcaataatatagaccaaatacatcatttaatgaat 2544449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 5094871 - 5094944
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatct 252  Q
    ||||||| |||||||||| |||||||||||| ||| ||||||  ||||| ||| |||||| || |||| |||||    
T  5094871 tttttaggttcattcatttaatgatgtatatggttcataatatggaccacatacatcattaaatgaatgaatct 5094944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 213
Target Start/End: Complemental strand, 8510613 - 8510580
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtt 213  Q
    |||| |||||||||||||||||||||||||||||    
T  8510613 ttttggattcattcattaaatgatgtatatagtt 8510580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 12242272 - 12242349
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaat 257  Q
    ||||||||||||||| |||||||||||| |  | || ||||||||| | ||| ||||||||| |||| ||||| ||||    
T  12242272 ttttagattcattcaataaatgatgtatgttatctacaataaagactacatacatcatttaatgaatgaatctaaaat 12242349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 261
Target Start/End: Original strand, 13333479 - 13333560
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtag 261  Q
    |||||||| ||||||||||||||||||| |||||| || || | |||  ||| |||||||||  ||| ||||| ||||||||    
T  13333479 ttttagatacattcattaaatgatgtatgtagtttgtattataaaccgcatacatcatttaatcaatgaatctaaaatgtag 13333560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 225
Target Start/End: Complemental strand, 21183435 - 21183390
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagac 225  Q
    |||||||||||||||||||||||||||| | || || |||||||||    
T  21183435 ttttagattcattcattaaatgatgtatgtggtctacaataaagac 21183390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 23962382 - 23962341
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataata 220  Q
    |||||||||||||||| ||||||||||| ||||| |||||||    
T  23962382 tttttagattcattcaataaatgatgtacatagtctataata 23962341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 33052251 - 33052210
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataata 220  Q
    |||||||||||||||||| |||||||||| | ||||||||||    
T  33052251 tttttagattcattcatttaatgatgtatgtggtttataata 33052210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 261
Target Start/End: Original strand, 41056920 - 41057001
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtag 261  Q
    |||||||| ||||||||||||||||||| |||| | || || | |||  ||| ||||||||| |||| ||||| ||||||||    
T  41056920 ttttagatacattcattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaatctaaaatgtag 41057001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 240
Target Start/End: Complemental strand, 41153224 - 41153163
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcattta 240  Q
    |||||||||||||| | ||| |||||||| | |||||||||| |||||| ||| ||||||||    
T  41153224 tttttagattcattgagtaattgatgtatttggtttataatatagaccaaatacatcattta 41153163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 238
Target Start/End: Original strand, 42263044 - 42263105
Alignment:
Q  177 attttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    |||||||| ||||||||||| |||||||||| | ||| |||||| ||| |||||| ||||||    
T  42263044 attttttaaattcattcatttaatgatgtatgtggttcataatatagatcatatacatcatt 42263105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 2060237 - 2060285
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccat 228  Q
    |||||| |||||||||| |||||||||| | || |||||||||||||||    
T  2060237 ttttaggttcattcatttaatgatgtatgtggtctataataaagaccat 2060285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 12242348 - 12242316
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagt 212  Q
    |||||||||||||||||||||||||||| ||||    
T  12242348 ttttagattcattcattaaatgatgtatgtagt 12242316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 32226684 - 32226636
Alignment:
Q  183 tagattcattcattaaatgatgtatatagtttataataaagaccatata 231  Q
    |||||||||||| | ||||||||||||||||| || || ||||||||||    
T  32226684 tagattcattcaattaatgatgtatatagtttttattatagaccatata 32226636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 38618427 - 38618471
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaaga 224  Q
    |||||||||||||| ||||||||||||| | || |||||||||||    
T  38618427 ttttagattcattcgttaaatgatgtatgtggtctataataaaga 38618471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 259
Target Start/End: Complemental strand, 44274650 - 44274571
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgt 259  Q
    |||||||||||||||| |||||||||||| |||| | | ||| |||| | ||||||||||||  |||| ||||| ||||||    
T  44274650 tttttagattcattcaataaatgatgtatgtagtctgt-atatagactacatatatcatttattgaatgaatctaaaatgt 44274571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 3e-20; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 180 - 258
Target Start/End: Original strand, 24287817 - 24287895
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatg 258  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||| |||||| |  |||||||||| |||||    
T  24287817 ttttagattcattcattaaatgatgtatatggtctataataaagaccatatacatcattaactgaataaatctaaaatg 24287895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 180 - 294
Target Start/End: Original strand, 33070197 - 33070310
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtagnnnnnnngcttataatag 279  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||||| | |||| || |||| ||||| ||||| |        |||||||||||    
T  33070197 ttttagattcattcattaaatgatgtatgtagtctataataaagaccatatacaccattaaatgaatgaatctaaaatgca-aaattttgcttataatag 33070295  T
Q  280 tgaccggagggtgta 294  Q
    |||||||||||||||    
T  33070296 tgaccggagggtgta 33070310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 294
Target Start/End: Complemental strand, 11295772 - 11295659
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtagnnnnnnngcttataatag 279  Q
    ||||||||||||||||||||||||| || | ||||||||||||||||| ||| ||||||||| ||||  |||| |||||| |       |||||||||||    
T  11295772 ttttagattcattcattaaatgatgcatgtggtttataataaagaccacatacatcatttaatgaatgtatctaaaatgttg-atttttgcttataatag 11295674  T
Q  280 tgaccggagggtgta 294  Q
    |||||||| ||||||    
T  11295673 tgaccggaaggtgta 11295659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 5888368 - 5888426
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    |||||||||||||||||||||||||||| | || |||||||||||||||||| ||||||    
T  5888368 ttttagattcattcattaaatgatgtatgttgtctataataaagaccatatacatcatt 5888426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 180 - 257
Target Start/End: Complemental strand, 7484725 - 7484648
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaat 257  Q
    |||||||||||||||||||||||||||| | ||  ||||||||||| ||||| ||||||||| |||| ||||| ||||    
T  7484725 ttttagattcattcattaaatgatgtatgtggtcgataataaagacgatatacatcatttaatgaatgaatctaaaat 7484648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 2296506 - 2296554
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccat 228  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||    
T  2296506 ttttagattcattcattaaatgatgtatatggtctataataaagaccat 2296554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 294
Target Start/End: Complemental strand, 31810442 - 31810329
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtagnnnnnnngcttataatag 279  Q
    ||||||||||||||||| ||||||||||   || ||||||||||||||| |  |||||| || |||| ||||| ||||||||       |||||||||||    
T  31810442 ttttagattcattcatttaatgatgtatgcggtctataataaagaccatgtgcatcattaaatgaatgaatctaaaatgtag-cattttgcttataatag 31810344  T
Q  280 tgaccggagggtgta 294  Q
    |||||||||||||||    
T  31810343 tgaccggagggtgta 31810329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 2382622 - 2382676
Alignment:
Q  184 agattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    |||||||||||||||||||||||| | || ||||||||||| |||||||||||||    
T  2382622 agattcattcattaaatgatgtatttggtctataataaagatcatatatatcatt 2382676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 13080120 - 13080178
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    |||||||||||||||||||||||||||| |||| | |||||||||||| ||| ||||||    
T  13080120 ttttagattcattcattaaatgatgtatgtagtctttaataaagaccacatacatcatt 13080178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 34580604 - 34580662
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    |||||| |||||||||||||| |||||| | ||||||||||||||||||||| ||||||    
T  34580604 ttttaggttcattcattaaattatgtatgtggtttataataaagaccatatacatcatt 34580662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 260
Target Start/End: Original strand, 7258617 - 7258697
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgta 260  Q
    ||||||||||||||||||||| |||||| | || |||||||||||||||||  |||||| |  |||| ||||| |||||||    
T  7258617 ttttagattcattcattaaataatgtatgtggtctataataaagaccatatgcatcattaattgaatgaatctaaaatgta 7258697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 25268083 - 25268031
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagaccatata 231  Q
    |||||||||| ||| |||||||||||||||| |||||||||||||| ||||||    
T  25268083 tttttagatttatttattaaatgatgtatatggtttataataaagatcatata 25268031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 294
Target Start/End: Original strand, 41387794 - 41387907
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtagnnnnnnngcttataatag 279  Q
    ||||||||| ||| |||||||||||||  | ||||||||||||||||| ||| || |||||| |||| ||||| |||| |||       |||||||||||    
T  41387794 ttttagattaatttattaaatgatgtacgtggtttataataaagaccacatacattatttaatgaatgaatctaaaatatag-ttttttgcttataatag 41387892  T
Q  280 tgaccggagggtgta 294  Q
    |||||||| ||||||    
T  41387893 tgaccggatggtgta 41387907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 259
Target Start/End: Original strand, 7484649 - 7484728
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgt 259  Q
    |||||||||||||||||||||||||||||| || | || ||  ||||| ||| ||||||||| |||| ||||| ||||||    
T  7484649 ttttagattcattcattaaatgatgtatatcgtctttattatcgaccacatacatcatttaatgaatgaatctaaaatgt 7484728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 9930984 - 9930933
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatata 231  Q
    ||||||||||||| |||| |||||||||||||| ||||||||||||| ||||    
T  9930984 ttttagattcattaattagatgatgtatatagtctataataaagaccgtata 9930933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 29360780 - 29360831
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatata 231  Q
    ||||||||||||||||||||||||||||||  | ||||| ||||||||||||    
T  29360780 ttttagattcattcattaaatgatgtatatgatctataacaaagaccatata 29360831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 261
Target Start/End: Complemental strand, 3225881 - 3225807
Alignment:
Q  187 ttcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtag 261  Q
    ||||||||||||||||||||| | || ||||||||||| |||||| |||||| |  |||||||| | ||||||||    
T  3225881 ttcattcattaaatgatgtatgtggtctataataaagatcatatacatcattaattgaataaatttaaaatgtag 3225807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 9878946 - 9878992
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagac 225  Q
    |||||||||||||||||||||| |||||| |||| ||||||||||||    
T  9878946 tttttagattcattcattaaattatgtatgtagtctataataaagac 9878992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 34326277 - 34326335
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||||||||||| | |||||||||| | ||||||||||||||| ||||| ||||||    
T  34326277 ttttagattcattcaattaatgatgtatgttgtttataataaagactatatacatcatt 34326335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 17871874 - 17871805
Alignment:
Q  177 attttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaat 246  Q
    ||||||||| ||||||||||||||||||||| |||| |||| ||  ||||| ||| ||||||||| ||||    
T  17871874 attttttaggttcattcattaaatgatgtatttagtctatattattgaccaaatacatcatttaatgaat 17871805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 294
Target Start/End: Complemental strand, 24287893 - 24287780
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtagnnnnnnngcttataatag 279  Q
    ||||||||| ||||| | |||||||||||| || | || || |||||||||| ||||||||| |||| ||||| ||||| |        |||||||||||    
T  24287893 ttttagatttattcagttaatgatgtatatggtctttattatagaccatatacatcatttaatgaatgaatctaaaatgca-aagttttgcttataatag 24287795  T
Q  280 tgaccggagggtgta 294  Q
    |||||||||||||||    
T  24287794 tgaccggagggtgta 24287780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 219
Target Start/End: Original strand, 42749086 - 42749126
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataat 219  Q
    ||||||||||||||||||||||||||||| |||| ||||||    
T  42749086 tttttagattcattcattaaatgatgtatgtagtctataat 42749126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 294
Target Start/End: Original strand, 10117008 - 10117115
Alignment:
Q  186 attcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtagnnnnnnngcttataatagtgaccg 285  Q
    |||||||||||||||||||||| | || ||||||||| | |||||| |||||| |  |||| ||||| |||||||        |||||||||||||||||    
T  10117008 attcattcattaaatgatgtatgtggtctataataaatatcatatacatcattaattgaatgaatctaaaatgta-aatttttgcttataatagtgaccg 10117106  T
Q  286 gagggtgta 294  Q
    || ||||||    
T  10117107 gatggtgta 10117115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 13290143 - 13290092
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatata 231  Q
    |||||||||||||||||||||||| ||| | || |||||| |||||||||||    
T  13290143 ttttagattcattcattaaatgatatatgtggtctataatgaagaccatata 13290092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 240
Target Start/End: Complemental strand, 13964530 - 13964467
Alignment:
Q  177 attttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcattta 240  Q
    |||||||||||||||| | ||||||||||| || || ||||||| |||||| ||| ||||||||    
T  13964530 attttttagattcattgagtaaatgatgtacatggtctataatatagaccacatacatcattta 13964467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 27502933 - 27502992
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcattt 239  Q
    ||||| |||||||||||||||||||||| |  |||||||||||||| | |||||| ||||    
T  27502933 ttttaaattcattcattaaatgatgtatgtgatttataataaagactacatatattattt 27502992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 292
Target Start/End: Original strand, 28882695 - 28882807
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtagnnnnnnngcttataata 278  Q
    |||||||||||||||| |||||||||||| | || ||||  | |||||| ||||||||||||  ||||||| || ||| || |       ||||||||||    
T  28882695 tttttagattcattcaataaatgatgtatgtggtatatataatagaccacatatatcatttattgaataaacctaaaaggttg-atttttgcttataata 28882793  T
Q  279 gtgaccggagggtg 292  Q
    ||||||||||||||    
T  28882794 gtgaccggagggtg 28882807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 175 - 258
Target Start/End: Complemental strand, 36916696 - 36916613
Alignment:
Q  175 ttattttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatg 258  Q
    |||| ||||||||| ||| ||||||| |||||| | || |||||||||||| | |||||||||| |  |||||||||| |||||    
T  36916696 ttatattttagatttatttattaaataatgtatgtggtctataataaagactaaatatatcattaattgaataaatctaaaatg 36916613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 10934711 - 10934653
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    |||||||||||||||||||||||||||| | || || ||||||||| | ||| ||||||    
T  10934711 ttttagattcattcattaaatgatgtatgtggtctacaataaagactacatacatcatt 10934653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 260
Target Start/End: Original strand, 17923707 - 17923777
Alignment:
Q  190 attcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgta 260  Q
    |||||||||||||||||| | ||||||||||| || || ||| |||||| |  |||||||||| |||||||    
T  17923707 attcattaaatgatgtatgttgtttataataatgatcaaatacatcattaattgaataaatctaaaatgta 17923777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 20546670 - 20546728
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||||||||||||||| |||||||| |  |  |||||||||||| |||||||||||    
T  20546670 ttttagattcattcattaattgatgtatgtgatcaataataaagaccttatatatcatt 20546728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 35874573 - 35874515
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||| ||||||| |||||||||||||| |  |||||||||||||| ||||| ||||||    
T  35874573 ttttacattcattaattaaatgatgtatgtgatttataataaagactatatacatcatt 35874515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 40640310 - 40640368
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    |||||||||||||||||||||||||||  | || |||||||||||| || || ||||||    
T  40640310 ttttagattcattcattaaatgatgtacgtggtctataataaagactatgtacatcatt 40640368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 44319637 - 44319579
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||| | ||| |||||||||||||| |||| |||||||||||||| ||| ||||||    
T  44319637 ttttagaataatttattaaatgatgtatgtagtctataataaagaccacatacatcatt 44319579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 240
Target Start/End: Complemental strand, 8506330 - 8506265
Alignment:
Q  175 ttattttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcattta 240  Q
    |||| ||||||||||||||| ||||| |||||| | || || ||||||||||| ||||| ||||||    
T  8506330 ttatgttttagattcattcaataaataatgtatgttgtctacaataaagaccacatataacattta 8506265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 13029358 - 13029391
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagt 212  Q
    ||||||||||||||||||||||||||||| ||||    
T  13029358 tttttagattcattcattaaatgatgtatgtagt 13029391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 237
Target Start/End: Complemental strand, 14700349 - 14700292
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcat 237  Q
    ||||||||||||| ||||||| |||||| | || ||||||||| | ||||||||||||    
T  14700349 ttttagattcatttattaaataatgtatgtggtctataataaataacatatatatcat 14700292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 228
Target Start/End: Original strand, 24053624 - 24053677
Alignment:
Q  175 ttattttttagattcattcattaaatgatgtatatagtttataataaagaccat 228  Q
    |||| |||||| |||||||||| |||||||||| | || |||||||||||||||    
T  24053624 ttatattttaggttcattcatttaatgatgtatgtggtctataataaagaccat 24053677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 2116138 - 2116182
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaaga 224  Q
    ||||||||||||||||| |||||||||| | || |||||||||||    
T  2116138 ttttagattcattcatttaatgatgtatgtggtctataataaaga 2116182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 260
Target Start/End: Complemental strand, 2296582 - 2296502
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgta 260  Q
    ||||||||||||||| | ||| ||||| || || | || || |||||||||| ||||||||| |||| ||||| |||||||    
T  2296582 ttttagattcattcaattaataatgtacatggtctttattatagaccatatacatcatttaatgaatgaatctaaaatgta 2296502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 6189742 - 6189682
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcattta 240  Q
    ||||||||||||||| |||||||||||| |||| |||| ||  ||||| ||| ||||||||    
T  6189742 ttttagattcattcaataaatgatgtatttagtctatattattgaccaaatacatcattta 6189682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 207
Target Start/End: Complemental strand, 13029423 - 13029395
Alignment:
Q  179 tttttagattcattcattaaatgatgtat 207  Q
    |||||||||||||||||||||||||||||    
T  13029423 tttttagattcattcattaaatgatgtat 13029395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 21435777 - 21435717
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcattta 240  Q
    ||||||||||||||| |||||||||||| | || || ||||||||||| ||| || |||||    
T  21435777 ttttagattcattcaataaatgatgtatgttgtctacaataaagaccacatacataattta 21435717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 180 - 261
Target Start/End: Complemental strand, 46829980 - 46829899
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtag 261  Q
    ||||||||| |||||||||||||||||  | ||||||||||||||||| ||| ||||||||| |||||||||| ||||||||    
T  46829980 ttttagatttattcattaaatgatgtacgtggtttataataaagaccacatagatcatttaatgaataaatctaaaatgtag 46829899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 188 - 257
Target Start/End: Original strand, 14891778 - 14891847
Alignment:
Q  188 tcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaat 257  Q
    |||||||||||||||||||||| || |||||||||||||||||| ||||||||  | |||||||| ||||    
T  14891778 tcattcattaaatgatgtatatggtctataataaagaccatatacatcatttattggataaatctaaaat 14891847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 257
Target Start/End: Complemental strand, 14775379 - 14775303
Alignment:
Q  181 tttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaat 257  Q
    |||| ||| |||||||||||||| | ||||||||||||||||||||| ||| ||||||||| |||| ||||| ||||    
T  14775379 tttaaatttattcattaaatgatatgtatagtttataataaagaccacataaatcatttaatgaatgaatctaaaat 14775303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 257
Target Start/End: Complemental strand, 29663773 - 29663697
Alignment:
Q  181 tttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaat 257  Q
    ||||||||||||||||||||||| ||| | || |||| ||||||||||| ||||||||||| |||| ||||| ||||    
T  29663773 tttagattcattcattaaatgatatatgtggtctatagtaaagaccatacatatcatttaatgaatgaatctaaaat 29663697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 260
Target Start/End: Complemental strand, 42761561 - 42761481
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgta 260  Q
    |||| |||||||||||||||||||||||||||| ||||||||||| || ||| |||||| |  |||| ||||| |||||||    
T  42761561 tttttgattcattcattaaatgatgtatatagtctataataaagatcagatacatcattaattgaatgaatctaaaatgta 42761481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 259
Target Start/End: Original strand, 41007709 - 41007788
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgt 259  Q
    ||||| ||| |||||||||||||||||| | || |||||||||||||| ||| ||||||||| |||| ||||| ||||||    
T  41007709 ttttaaatttattcattaaatgatgtatgtggtctataataaagaccacatacatcatttaatgaatgaatctaaaatgt 41007788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 33765895 - 33765837
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||||||||| |||||||||||||| | || |||||||||||||||||| ||||||    
T  33765895 ttttagattcatttattaaatgatgtatgtggtctataataaagaccatatacatcatt 33765837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 34953928 - 34953986
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||| |||||||||||||||||||||| | || |||||||||||||||||| ||||||    
T  34953928 ttttaaattcattcattaaatgatgtatgtggtctataataaagaccatatacatcatt 34953986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 257
Target Start/End: Complemental strand, 3013718 - 3013641
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaat 257  Q
    ||||| ||||||||||||||||||||||||  |||||||||||||||| ||| | |||| |  |||||||||| ||||    
T  3013718 ttttacattcattcattaaatgatgtatattatttataataaagaccacatacaacattaattgaataaatctaaaat 3013641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 261
Target Start/End: Complemental strand, 3549887 - 3549806
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtag 261  Q
    ||||| ||||||||||||||| |||||| | || ||||||||||||| ||||||||||| |  |||| ||||| ||||||||    
T  3549887 ttttaaattcattcattaaataatgtatgtggtctataataaagaccgtatatatcattaattgaatgaatctaaaatgtag 3549806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 11989340 - 11989413
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatct 252  Q
    ||||||| |||||||||||||||| |||| |||| |||||||||||| | ||| ||||||||| |||| |||||    
T  11989340 tttttaggttcattcattaaatgacgtatgtagtctataataaagactacatacatcatttaatgaatgaatct 11989413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 257
Target Start/End: Complemental strand, 38784660 - 38784583
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaat 257  Q
    ||||||||| ||||||||||| |||||  |  |||||||||||||||| |||||| |||||| |||||||||| ||||    
T  38784660 ttttagattaattcattaaataatgtacgtgatttataataaagaccacatatattatttaatgaataaatctaaaat 38784583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 38834638 - 38834703
Alignment:
Q  175 ttattttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcattta 240  Q
    |||||||||||||||||| | ||||||||||||||||| ||||  || ||||||||| ||||||||    
T  38834638 ttattttttagattcattaaataaatgatgtatatagtctatataaatgaccatatacatcattta 38834703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 2492508 - 2492568
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcattta 240  Q
    ||||||||||||||| | |||||||||| | |||||||||||||| |||||| ||||||||    
T  2492508 ttttagattcattcactgaatgatgtatgtggtttataataaagatcatatacatcattta 2492568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 238
Target Start/End: Original strand, 38149395 - 38149454
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||| |||||||||| |||||||||||||||||||||||  ||||| ||| ||||||    
T  38149395 tttttaggttcattcatttaatgatgtatatagtttataatatggaccacatacatcatt 38149454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 237
Target Start/End: Original strand, 14890237 - 14890287
Alignment:
Q  187 ttcattcattaaatgatgtatatagtttataataaagaccatatatatcat 237  Q
    |||||||||||||||||||| || || |||||||||||||||||| |||||    
T  14890237 ttcattcattaaatgatgtaaatggtctataataaagaccatatacatcat 14890287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 22558971 - 22558913
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||||||||| | |||||||  ||| ||||||||||||||||||| ||||||||||    
T  22558971 ttttagattcatttaataaatgaaatatgtagtttataataaagaccacatatatcatt 22558913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 24981949 - 24981883
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaat 246  Q
    ||||||||||||||||||||||||||||   |||||||||| |||| | ||| ||||||||| ||||    
T  24981949 ttttagattcattcattaaatgatgtatgcggtttataatacagactacatacatcatttaatgaat 24981883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 294
Target Start/End: Original strand, 33939336 - 33939442
Alignment:
Q  187 ttcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtagnnnnnnngcttataatagtgaccgg 286  Q
    |||||||||| |||||||||| | || ||||||||||||||| |  |||||| || |||| ||||| |||||||        ||||||||||||||||||    
T  33939336 ttcattcatttaatgatgtatgtggtctataataaagaccatgtgcatcattaaatgaatgaatctaaaatgta-aacttttgcttataatagtgaccgg 33939434  T
Q  287 agggtgta 294  Q
    ||||||||    
T  33939435 agggtgta 33939442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 250
Target Start/End: Complemental strand, 41007785 - 41007715
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaat 250  Q
    |||||||||||||||||||||||||||| | || | || || |||||| ||| ||||||||| ||||||||    
T  41007785 ttttagattcattcattaaatgatgtatgtggtctttattatagaccacatacatcatttaatgaataaat 41007715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 46906893 - 46906959
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaat 246  Q
    ||||||||||||||||||||||||||||   |||||||||| |||| | ||| ||||||||| ||||    
T  46906893 ttttagattcattcattaaatgatgtatgcggtttataatacagactacatacatcatttaatgaat 46906959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 231
Target Start/End: Original strand, 48083496 - 48083587
Alignment:
Q  140 atatacaccttctggtcactattataggnnnnnnnttattttttagattcattcattaaatgatgtatatagtttataataaagaccatata 231  Q
    ||||||||| |||||||||||||||| |       | || |||||| ||||||||||||||||||||| | || ||||||||||| ||||||    
T  48083496 atatacaccctctggtcactattataagcaaaaattaatattttaggttcattcattaaatgatgtatgtggtctataataaagatcatata 48083587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 213
Target Start/End: Original strand, 23398451 - 23398484
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtt 213  Q
    ||||||||||||||||||||||||||||||||||    
T  23398451 ttttagattcattcattaaatgatgtatatagtt 23398484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 28038936 - 28038863
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatct 252  Q
    |||||||||||||| |||||||||||||| ||||||||| ||  ||||| ||| | ||||||| |||| |||||    
T  28038936 tttttagattcatttattaaatgatgtatttagtttatattattgaccaaatacaacatttaatgaatgaatct 28038863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 294
Target Start/End: Original strand, 31130845 - 31130959
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtagnnnnnnngcttataatag 279  Q
    |||||| |||||||||| |||||||||||| || ||||||||||| ||| |  |||||| || |||| || || ||||||||       ||||||| |||    
T  31130845 ttttaggttcattcatttaatgatgtatatggtctataataaagatcatgtgcatcattaaatgaatgaacctaaaatgtagtttttttgcttatattag 31130944  T
Q  280 tgaccggagggtgta 294  Q
    ||| |||||||||||    
T  31130945 tgatcggagggtgta 31130959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 257
Target Start/End: Complemental strand, 50503291 - 50503214
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaat 257  Q
    ||||| ||||||| |||||||||||||| | || ||||||||||| |||||| |||||| |  |||||||||| ||||    
T  50503291 ttttatattcatttattaaatgatgtatgtggtctataataaagatcatatacatcattaattgaataaatctaaaat 50503214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 294
Target Start/End: Complemental strand, 6283643 - 6283530
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtagnnnnnnngcttataatag 279  Q
    |||||| |||||||||| |||||||||| | || ||||||||||||||| |  |||||| || |||| || || ||||||||       ||||||| |||    
T  6283643 ttttaggttcattcatttaatgatgtatgtggtctataataaagaccatgtgcatcattaaatgaatgaacctaaaatgtag-ttttttgcttatattag 6283545  T
Q  280 tgaccggagggtgta 294  Q
    |||||||||||||||    
T  6283544 tgaccggagggtgta 6283530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 238
Target Start/End: Original strand, 11324479 - 11324523
Alignment:
Q  194 attaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    |||||||||||||| |||| |||||||||||||||||| ||||||    
T  11324479 attaaatgatgtatgtagtctataataaagaccatatacatcatt 11324523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 238
Target Start/End: Original strand, 11482500 - 11482544
Alignment:
Q  194 attaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    |||||||||||||| |||| |||||||||||||||||| ||||||    
T  11482500 attaaatgatgtatgtagtctataataaagaccatatacatcatt 11482544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 29663698 - 29663770
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatct 252  Q
    |||||||||||||||||||||||| | ||| || | || || |||||| ||||||||||||| |||| |||||    
T  29663698 ttttagattcattcattaaatgatatgtatggtctttactatagaccacatatatcatttaatgaatgaatct 29663770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 238
Target Start/End: Original strand, 435237 - 435296
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    |||||||||||||||||| |||||||||| | ||||||||||  ||||| ||| ||||||    
T  435237 tttttagattcattcatttaatgatgtatgtggtttataatatggaccacatacatcatt 435296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 259
Target Start/End: Original strand, 14967257 - 14967336
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgt 259  Q
    ||||| ||| |||||||||||||||||| | |  ||||||||||| || ||| ||||||||| |||| ||||| ||||||    
T  14967257 ttttacatttattcattaaatgatgtatgtggcctataataaagatcacatacatcatttaatgaatgaatctaaaatgt 14967336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 15311581 - 15311522
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||| |||||||||| |||||||||| ||||||||||||  ||||| ||| ||||||    
T  15311581 tttttaggttcattcatttaatgatgtatgtagtttataatatggaccacatacatcatt 15311522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 222
Target Start/End: Complemental strand, 29302174 - 29302131
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaa 222  Q
    |||||||||||||||||||||||| |||| |||| |||||||||    
T  29302174 tttttagattcattcattaaatgacgtatgtagtctataataaa 29302131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 238
Target Start/End: Original strand, 31327598 - 31327657
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||| |||||||||| |||||||||||| ||| |||||| |||||| ||| ||||||    
T  31327598 tttttaggttcattcatttaatgatgtatatggttcataatatagaccacatacatcatt 31327657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 175 - 238
Target Start/End: Complemental strand, 31909862 - 31909799
Alignment:
Q  175 ttattttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||||||| |||||||| | |||||||||| | |||||||||| |||||| ||| ||||||    
T  31909862 ttattttttaggttcattcaattaatgatgtatgtggtttataatatagaccacatacatcatt 31909799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 240
Target Start/End: Original strand, 36163987 - 36164049
Alignment:
Q  177 attttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcattta 240  Q
    |||||||||||| ||||| |||||||||||| |||||||| ||| | |||| ||||||||||||    
T  36163987 attttttagatttattcaataaatgatgtatgtagtttat-atatataccacatatatcattta 36164049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 50550227 - 50550176
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatata 231  Q
    |||||||||||||||||||||||||||| |  | ||||||||||| ||||||    
T  50550227 ttttagattcattcattaaatgatgtatgtgatctataataaagatcatata 50550176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 8466034 - 8465976
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||||||||| ||| |||||||||| | || |||||||||||||| ||| ||||||    
T  8466034 ttttagattcatttatttaatgatgtatgtggtctataataaagaccacatacatcatt 8465976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 9590776 - 9590834
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||||||||||||||||  |||||| | || ||||||||||| |||||| ||||||    
T  9590776 ttttagattcattcattaaacaatgtatgtggtatataataaagatcatatacatcatt 9590834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 26674218 - 26674276
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||| ||| ||||||||||| |||||| | || |||||||||||||||||| ||||||    
T  26674218 ttttatatttattcattaaattatgtatgtggtctataataaagaccatatacatcatt 26674276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 258
Target Start/End: Original strand, 31998221 - 31998299
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatg 258  Q
    ||||| ||||||| |||||||||||||| |  | ||||||||||| |||||| |||||| || |||| ||||| |||||    
T  31998221 ttttatattcatttattaaatgatgtatgtgatctataataaagatcatatacatcattaaatgaatgaatctaaaatg 31998299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 250
Target Start/End: Original strand, 35544565 - 35544635
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaat 250  Q
    ||||| |||||||| ||||||||||||| | || |||||| ||||||| ||| | ||||||| ||||||||    
T  35544565 ttttaaattcattcgttaaatgatgtatgtggtctataatgaagaccacatacaccatttaatgaataaat 35544635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 39362917 - 39362859
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||||||||| ||||||||| |||| | || ||||||||||| |||||| ||||||    
T  39362917 ttttagattcatttattaaatgaagtatgtggtctataataaagatcatatacatcatt 39362859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 47717 - 47790
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatct 252  Q
    |||||||||||||||||||||| |  ||| |||  |||||||||||| | ||| ||||||||| |||| |||||    
T  47717 tttttagattcattcattaaataacatatgtagactataataaagactacatacatcatttaatgaatgaatct 47790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 47795 - 47762
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagt 212  Q
    ||||||||||||||||||||||||||||| ||||    
T  47795 tttttagattcattcattaaatgatgtatgtagt 47762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 11989418 - 11989385
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagt 212  Q
    ||||||||||||||||||||||||||||| ||||    
T  11989418 tttttagattcattcattaaatgatgtatgtagt 11989385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 15351742 - 15351807
Alignment:
Q  175 ttattttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcattta 240  Q
    |||| ||||| ||||||||| |||||||||||| | || || ||||||||||| ||| ||||||||    
T  15351742 ttatattttaaattcattcaataaatgatgtatgttgtctacaataaagaccacatacatcattta 15351807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 19580305 - 19580264
Alignment:
Q  176 tattttttagattcattcattaaatgatgtatatagtttata 217  Q
    ||||||||||||||||||| |||||||||||| |||| ||||    
T  19580305 tattttttagattcattcaataaatgatgtatgtagtgtata 19580264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 240
Target Start/End: Original strand, 25391866 - 25391927
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcattta 240  Q
    |||||||||||||||| |||| ||| |||||  ||||||||| | | |||||||||||||||    
T  25391866 tttttagattcattcaataaacgatatatatgatttataatatatatcatatatatcattta 25391927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 240
Target Start/End: Complemental strand, 44673994 - 44673934
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcattta 240  Q
    |||||||||||||||| ||| |||| ||| |||||||| ||| |||||| ||||||||||||    
T  44673994 tttttagattcattcaataa-tgatatatgtagtttattatatagaccacatatatcattta 44673934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 49586190 - 49586149
Alignment:
Q  187 ttcattcattaaatgatgtatatagtttataataaagaccat 228  Q
    |||||||||| |||||||||| | ||||||||||||||||||    
T  49586190 ttcattcatttaatgatgtatgtggtttataataaagaccat 49586149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 260
Target Start/End: Complemental strand, 1597297 - 1597217
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgta 260  Q
    ||||| ||| |||||||||||||| ||||| ||  |||||||||| |||||| |||||| |  |||||||| | |||||||    
T  1597297 ttttaaatttattcattaaatgatatatatggtcgataataaagatcatatacatcattaattgaataaatttaaaatgta 1597217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 6079171 - 6079112
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcattta 240  Q
    ||||||||||||||| |||||||||||| | ||| || ||| |||||| ||||||||||||    
T  6079171 ttttagattcattcaataaatgatgtatgtcgttcat-atacagaccacatatatcattta 6079112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 8984296 - 8984236
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcattta 240  Q
    ||||||||||||||| |||||||| ||| | || || ||||||||||| ||| ||||||||    
T  8984296 ttttagattcattcaataaatgatttatgttgtctacaataaagaccacatacatcattta 8984236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 260
Target Start/End: Original strand, 13877017 - 13877097
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgta 260  Q
    ||||| ||| ||||||||||||||||||||  | ||||||||||| |||||| || ||  |  |||||||||| |||||||    
T  13877017 ttttaaatttattcattaaatgatgtatatgatatataataaagatcatatacattatagattgaataaatctaaaatgta 13877097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 260
Target Start/End: Original strand, 23575350 - 23575430
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgta 260  Q
    |||||| |||||||||| |||||||||| | || ||||||||||| |||||  |||||| || |||| || || |||||||    
T  23575350 ttttaggttcattcatttaatgatgtatgtggtctataataaagatcatatgcatcattaaatgaatgaacctaaaatgta 23575430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 27936780 - 27936736
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaag 223  Q
    |||||||||||||| ||||||||| |||| |||| ||||||||||    
T  27936780 tttttagattcatttattaaatgacgtatgtagtctataataaag 27936736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 29673915 - 29673875
Alignment:
Q  177 attttttagattcattcattaaatgatgtatatagtttata 217  Q
    |||||||||||||||||||| |||||||||| |||| ||||    
T  29673915 attttttagattcattcatttaatgatgtatgtagtctata 29673875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 36486646 - 36486603
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaaga 224  Q
    ||||| ||||||| |||||||||||||||| ||||||||||||||    
T  36486646 ttttatattcatt-attaaatgatgtatatggtttataataaaga 36486603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 39075881 - 39075913
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagt 212  Q
    |||||||||||||||||||||||||||| ||||    
T  39075881 ttttagattcattcattaaatgatgtatgtagt 39075913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 39075949 - 39075981
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagt 212  Q
    |||||||||||||||||||||||||||| ||||    
T  39075949 ttttagattcattcattaaatgatgtatgtagt 39075981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 39076016 - 39075984
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagt 212  Q
    |||||||||||||||||||||||||||| ||||    
T  39076016 ttttagattcattcattaaatgatgtatgtagt 39075984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 207
Target Start/End: Original strand, 41621317 - 41621349
Alignment:
Q  175 ttattttttagattcattcattaaatgatgtat 207  Q
    |||||||||||||||||||||| ||||||||||    
T  41621317 ttattttttagattcattcatttaatgatgtat 41621349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 42914565 - 42914597
Alignment:
Q  177 attttttagattcattcattaaatgatgtatat 209  Q
    |||||||||||||||||||| ||||||||||||    
T  42914565 attttttagattcattcatttaatgatgtatat 42914597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 43318040 - 43318100
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcattta 240  Q
    |||||| |||||||| |||||  ||||| |||| ||||||| ||||||| |||||||||||    
T  43318040 ttttaggttcattcaataaattgtgtatgtagtctataatatagaccatgtatatcattta 43318100  T

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Target: chr7 (Bit Score: 47; Significance: 7e-18; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 37101727 - 37101781
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatat 234  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  37101727 ttttagattcattcattaaatgatgtatgtggtttataataaagaccatatatat 37101781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 31319670 - 31319566
Alignment:
Q  134 ttaataatatacaccttctggtcactattataggnnnnnnnttattttttagattcattcattaaatgatgtatatagtttataataaagaccatatata 233  Q
    ||||||||||||||| || | ||||||||||| |        |||||||||||||||||||  ||||||||||| |||| |||||||||||||| |||||    
T  31319670 ttaataatatacaccctccgatcactattataaggaaaaatatattttttagattcattcaaaaaatgatgtatgtagtctataataaagaccacatata 31319571  T
Q  234 tcatt 238  Q
    |||||    
T  31319570 tcatt 31319566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 23797380 - 23797438
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||| ||| ||||||    
T  23797380 ttttagattcattcattaaatgatgtatgtagtctataataaagaccagatacatcatt 23797438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 180 - 261
Target Start/End: Original strand, 10095751 - 10095832
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtag 261  Q
    |||||||||||||||||||||||||||| | || ||| |||||||||||||| || ||| ||  ||||||||| ||||||||    
T  10095751 ttttagattcattcattaaatgatgtatgtggtctatgataaagaccatatacataattaaataaataaatctaaaatgtag 10095832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 260
Target Start/End: Complemental strand, 9555368 - 9555288
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgta 260  Q
    |||||||||||||||||||||||||||| | |||||| |||||||| ||||| |||||| |  |||||||| | |||||||    
T  9555368 ttttagattcattcattaaatgatgtatgtggtttatgataaagactatatacatcattaattgaataaatttaaaatgta 9555288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 8595174 - 8595221
Alignment:
Q  175 ttattttttagattcattcattaaatgatgtatatagtttataataaa 222  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||    
T  8595174 ttattttttagattcattcattaaatgatgtatgtagtctataataaa 8595221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 4089161 - 4089219
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||| ||||||||||||||||||||||||  | |||||||||||||||||| ||||||    
T  4089161 ttttatattcattcattaaatgatgtatatgttctataataaagaccatatacatcatt 4089219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 241
Target Start/End: Original strand, 16777923 - 16777985
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaa 241  Q
    |||||||||||||| |||||||||||||| |||| |||||||||||| | ||| |||||||||    
T  16777923 tttttagattcatttattaaatgatgtatgtagtctataataaagactacatacatcatttaa 16777985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 261
Target Start/End: Original strand, 25814721 - 25814795
Alignment:
Q  187 ttcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtag 261  Q
    |||||||||| |||||||||| ||||||||||||||||| || || || ||| || |||||||||| ||||||||    
T  25814721 ttcattcatttaatgatgtatgtagtttataataaagactatgtacattattaaatgaataaatctaaaatgtag 25814795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 33935030 - 33935088
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||  | ||||||||||    
T  33935030 ttttagattcattcatttaataatgtatatagtttataataaagattaaatatatcatt 33935088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 291
Target Start/End: Complemental strand, 41803830 - 41803720
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtagnnnnnnngcttataatag 279  Q
    |||||| |||||||||| |||||||||||| || ||||||||||||||| |  |||||| ||  ||||||||| ||||||||       | |||||||||    
T  41803830 ttttaggttcattcatttaatgatgtatatggtctataataaagaccatgtgcatcattaaataaataaatctaaaatgtagattttttg-ttataatag 41803732  T
Q  280 tgaccggagggt 291  Q
    ||||||||||||    
T  41803731 tgaccggagggt 41803720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 295
Target Start/End: Original strand, 8447749 - 8447863
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtagnnnnnnngcttataatag 279  Q
    |||||| |||||||||| |||||||||||| || ||||||||||| ||| |  |||||| || |||| ||||| ||||||||       |||||||||||    
T  8447749 ttttaggttcattcatttaatgatgtatatggtctataataaagatcatgtgcatcattcaatgaatgaatctaaaatgtag-atttttgcttataatag 8447847  T
Q  280 tgaccggagggtgtaa 295  Q
    |||||| |||||||||    
T  8447848 tgaccgaagggtgtaa 8447863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 261
Target Start/End: Original strand, 28321596 - 28321676
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtag 261  Q
    ||||||||||||||| ||||| |||||||| ||  ||||||||||| |||||||||||| |  |||||||||| ||||||||    
T  28321596 ttttagattcattcaataaattatgtatatggtc-ataataaagactatatatatcattaattgaataaatctaaaatgtag 28321676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 294
Target Start/End: Original strand, 34275223 - 34275337
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtagnnnnnnngcttataatag 279  Q
    |||||| |||||||||| |||||||||| | || |||||||||||| || |  |||||| || |||| ||||| ||||||||       ||||||| |||    
T  34275223 ttttaggttcattcatttaatgatgtatgtggtctataataaagactatgtgcatcattaaatgaatgaatctaaaatgtagtttttttgcttatattag 34275322  T
Q  280 tgaccggagggtgta 294  Q
    |||||||||||||||    
T  34275323 tgaccggagggtgta 34275337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 23818456 - 23818500
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaaga 224  Q
    ||||||||||||||||||||||||||||||| | |||||||||||    
T  23818456 ttttagattcattcattaaatgatgtatataatctataataaaga 23818500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 2297440 - 2297394
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagac 225  Q
    ||||||||||||||||||||  |||||||||||| ||||||||||||    
T  2297440 tttttagattcattcattaagcgatgtatatagtctataataaagac 2297394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 7701220 - 7701286
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaat 246  Q
    ||||||||||||||||||||||||||||   |||||||||| |||| | ||| ||||||||| ||||    
T  7701220 ttttagattcattcattaaatgatgtatgcggtttataatacagactacatacatcatttaatgaat 7701286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 25774290 - 25774232
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||||||||||| |||||||||||| |||| |||||||||||| | ||| ||||||    
T  25774290 ttttagattcattcactaaatgatgtatgtagtctataataaagactacataaatcatt 25774232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 213
Target Start/End: Complemental strand, 5950302 - 5950269
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtt 213  Q
    ||||||||||||||||||||||||||||||||||    
T  5950302 ttttagattcattcattaaatgatgtatatagtt 5950269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 294
Target Start/End: Complemental strand, 6455657 - 6455544
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtagnnnnnnngcttataatag 279  Q
    |||||| |||||||||| |||||||||| | || ||||||||||||||| |  |||||| || |||| ||||| |||||||        |||||||||||    
T  6455657 ttttaggttcattcatttaatgatgtatgtggtctataataaagaccatgtgcatcattaaatgaatgaatctaaaatgta-aatttttgcttataatag 6455559  T
Q  280 tgaccggagggtgta 294  Q
    ||| |||||||||||    
T  6455558 tgatcggagggtgta 6455544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 26477193 - 26477270
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaat 257  Q
    ||||||||| ||| |||||||| ||||||| ||||||| |||||| |||||| |||||| |   ||||||||||||||    
T  26477193 ttttagatttatttattaaatggtgtatatggtttatattaaagatcatatacatcattaattaaataaatcttaaat 26477270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 26553633 - 26553710
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaat 257  Q
    ||||||||| ||| |||||||| ||||||| ||||||| |||||| |||||| |||||| |   ||||||||||||||    
T  26553633 ttttagatttatttattaaatggtgtatatggtttatattaaagatcatatacatcattaattaaataaatcttaaat 26553710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 41890034 - 41890103
Alignment:
Q  177 attttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaat 246  Q
    |||||||| ||||||||||| |||||||||||| ||| ||||||  ||||| ||| |||||| |||||||    
T  41890034 attttttatattcattcatttaatgatgtatatggttcataatatggaccacatacatcattaaacgaat 41890103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 2360480 - 2360524
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaag 223  Q
    |||||||||||||||||||||||| |||| |||| ||||||||||    
T  2360480 tttttagattcattcattaaatgacgtatgtagtctataataaag 2360524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 4089827 - 4089879
Alignment:
Q  186 attcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||||||||||||||||||||  |  ||||||||||||||||| ||||||    
T  4089827 attcattcattaaatgatgtatatgctccataataaagaccatatacatcatt 4089879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 6250707 - 6250639
Alignment:
Q  181 tttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaa 249  Q
    |||||||||||| | ||||||||||||  ||| ||||||| |||||| ||||||||||||  |||||||    
T  6250707 tttagattcatttaataaatgatgtatgcagtatataatatagaccacatatatcatttattgaataaa 6250639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 294
Target Start/End: Complemental strand, 24935992 - 24935887
Alignment:
Q  188 tcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtagnnnnnnngcttataatagtgaccgga 287  Q
    ||||| ||| ||||||||||||  ||||||||||||||||| | ||||||| || |||| || || ||||||||       ||||||| |||||||||||    
T  24935992 tcatttatttaatgatgtatatgatttataataaagaccatgtgtatcattaaatgaatgaacctaaaatgtag-atttttgcttatattagtgaccgga 24935894  T
Q  288 gggtgta 294  Q
    |||||||    
T  24935893 gggtgta 24935887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 260
Target Start/End: Original strand, 26385657 - 26385737
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgta 260  Q
    ||||||||||||||| ||||| |||||| | || |||||||||||||| ||| |||||| |   ||| |||||||||||||    
T  26385657 ttttagattcattcaataaattatgtatgtggtctataataaagaccacatacatcattaattaaatgaatcttaaatgta 26385737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 260
Target Start/End: Original strand, 30138820 - 30138900
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgta 260  Q
    |||| ||||||||||||||||||||| | | || |||||||||||| ||||| |||||| |  |||| ||||| |||||||    
T  30138820 ttttggattcattcattaaatgatgtgtgtggtctataataaagactatatacatcattaattgaatgaatctaaaatgta 30138900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 246
Target Start/End: Original strand, 8571413 - 8571480
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaat 246  Q
    ||||||||||||||||||||||||  ||| |||| |||||||||| | | ||| ||||||||| ||||    
T  8571413 tttttagattcattcattaaatgacatatgtagtctataataaagtctacatacatcatttaatgaat 8571480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 222
Target Start/End: Complemental strand, 12171351 - 12171308
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaa 222  Q
    |||||||||||||| |||||||||||||| |||| |||||||||    
T  12171351 tttttagattcatttattaaatgatgtatgtagtctataataaa 12171308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 25245251 - 25245192
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcattt 239  Q
    |||||||||||||||||||||||||||| | || || ||||||||| | ||| |||||||    
T  25245251 ttttagattcattcattaaatgatgtatgtggtctacaataaagactacatacatcattt 25245192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 238
Target Start/End: Original strand, 28409603 - 28409662
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    |||||||||||||||| |||||||||||| ||||  | |||| ||| |||||||||||||    
T  28409603 tttttagattcattcaataaatgatgtatgtagtccacaatatagatcatatatatcatt 28409662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 259
Target Start/End: Complemental strand, 31115717 - 31115638
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgt 259  Q
    |||||| |||||||||||||| |||||| | || |||||||||||  ||||| ||||||||| | || ||||| ||||||    
T  31115717 ttttagcttcattcattaaattatgtatgtggtctataataaagaatatatacatcatttaatggatgaatctaaaatgt 31115638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 227
Target Start/End: Original strand, 41404047 - 41404094
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagacca 227  Q
    |||||||||||||||||||||||||||| | || || |||||||||||    
T  41404047 ttttagattcattcattaaatgatgtatctggtctaaaataaagacca 41404094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 21586846 - 21586904
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||||||||| ||| |||||||||| | || ||||||||||| |||||| ||||||    
T  21586846 ttttagattcatttattcaatgatgtatgtggtctataataaagatcatatacatcatt 21586904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 25768727 - 25768669
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    |||||||||||||||  ||||||||||| |||| |||||||||||| | ||| ||||||    
T  25768727 ttttagattcattcaccaaatgatgtatgtagtctataataaagactacatagatcatt 25768669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 224
Target Start/End: Complemental strand, 5689389 - 5689340
Alignment:
Q  175 ttattttttagattcattcattaaatgatgtatatagtttataataaaga 224  Q
    |||| |||||| |||||||||| |||||||||| | ||||||||||||||    
T  5689389 ttatattttaggttcattcatttaatgatgtatgtggtttataataaaga 5689340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 261
Target Start/End: Complemental strand, 7701296 - 7701215
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtag 261  Q
    |||||||| ||||||||||||||||||| |||| | || || | |||  ||| ||||||||| |||| ||||| ||||||||    
T  7701296 ttttagatacattcattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaatctaaaatgtag 7701215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 240
Target Start/End: Complemental strand, 8169205 - 8169145
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcattta 240  Q
    |||||||||||||||| |||||||||||| |||| ||| ||| |||||| ||| ||||||||    
T  8169205 tttttagattcattcaataaatgatgtatgtagtctat-atatagaccacatacatcattta 8169145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 217
Target Start/End: Original strand, 24617825 - 24617866
Alignment:
Q  176 tattttttagattcattcattaaatgatgtatatagtttata 217  Q
    ||||||||||||||||||| ||||| ||||||||||| ||||    
T  24617825 tattttttagattcattcaataaataatgtatatagtctata 24617866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 240
Target Start/End: Complemental strand, 27163274 - 27163213
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcattta 240  Q
    |||||||||||| | | |||||||||||| | |||||||||| |||||| ||| ||||||||    
T  27163274 tttttagattcactaaataaatgatgtatgtggtttataatatagaccacatacatcattta 27163213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 28752190 - 28752121
Alignment:
Q  177 attttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaat 246  Q
    |||||||| |||||||||||||||||| ||| | ||  |||||| |||||| ||| ||||||||| ||||    
T  28752190 attttttacattcattcattaaatgatatatttggtcaataatatagaccaaatacatcatttaatgaat 28752121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 35216503 - 35216568
Alignment:
Q  175 ttattttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcattta 240  Q
    |||| ||||||||||||||| |||||||| ||| | ||||| | ||||||||| ||| ||||||||    
T  35216503 ttatattttagattcattcaataaatgatatatgttgtttacagtaaagaccacatacatcattta 35216568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 225
Target Start/End: Complemental strand, 41872159 - 41872114
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagac 225  Q
    ||||||||||||||||| |||||||||| | || ||||||||||||    
T  41872159 ttttagattcattcatttaatgatgtatgtggtctataataaagac 41872114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 240
Target Start/End: Original strand, 43813156 - 43813217
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcattta 240  Q
    |||||||||||||||| ||||||| |||| |||| |||||||  ||||| ||| ||||||||    
T  43813156 tttttagattcattcaataaatgaagtatgtagtctataatattgaccacatacatcattta 43813217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 46648376 - 46648409
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagt 212  Q
    ||||||||||||||||||||||||||||| ||||    
T  46648376 tttttagattcattcattaaatgatgtatgtagt 46648409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 2943244 - 2943288
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaaga 224  Q
    |||||||||||||||||||||||||||| | || || ||||||||    
T  2943244 ttttagattcattcattaaatgatgtatgtggtctacaataaaga 2943288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 4406111 - 4406159
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccat 228  Q
    |||||| |||||||||| |||||||||| | || |||||||||||||||    
T  4406111 ttttaggttcattcatttaatgatgtatgtggtctataataaagaccat 4406159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 10422839 - 10422883
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaag 223  Q
    ||||||||||||||| |||||||| |||| |||| ||||||||||    
T  10422839 tttttagattcattcgttaaatgacgtatgtagtctataataaag 10422883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 14995973 - 14995913
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcattta 240  Q
    |||||||||| |||| ||||||||| || | || || ||||||||||| ||||||||||||    
T  14995973 ttttagattcgttcaataaatgatgcatgttgtctacaataaagaccacatatatcattta 14995913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 18820039 - 18819979
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcattta 240  Q
    ||||||||||||||| |||||||||||| | || |||| ||||||  | ||||||||||||    
T  18820039 ttttagattcattcaataaatgatgtatgttgtctatattaaagattacatatatcattta 18819979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 19688131 - 19688191
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcattta 240  Q
    |||||| |||||||| |||||||||||| |||||||| ||  |||||| ||| ||||||||    
T  19688131 ttttaggttcattcaataaatgatgtatgtagtttattatgtagaccacatacatcattta 19688191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 22281912 - 22281860
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatat 232  Q
    ||||||||| |||||||||||||||||| |  | |||||||||||||| ||||    
T  22281912 ttttagatttattcattaaatgatgtatgtgctctataataaagaccacatat 22281860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 29263766 - 29263798
Alignment:
Q  202 atgtatatagtttataataaagaccatatatat 234  Q
    ||||||||||||||||||| |||||||||||||    
T  29263766 atgtatatagtttataatatagaccatatatat 29263798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 7e-18; HSPs: 89)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 21142122 - 21142180
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||    
T  21142122 ttttagattcatgcattaaatgatgtatttagtttataataaagaccatatacatcatt 21142180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 260
Target Start/End: Original strand, 18626739 - 18626819
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgta 260  Q
    |||||||||||||||||||||||||||| | |||||||||||||| |||||  |||||| |  |||||||||| |||||||    
T  18626739 ttttagattcattcattaaatgatgtatgtggtttataataaagatcatatgcatcattaattgaataaatctaaaatgta 18626819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 259
Target Start/End: Complemental strand, 52914106 - 52914027
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgt 259  Q
    |||||||||||||||||||||||||||| | || |||||||||||| ||||| ||||||| | |||| ||||| ||||||    
T  52914106 ttttagattcattcattaaatgatgtatgtggtctataataaagactatatacatcatttcatgaatgaatctaaaatgt 52914027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 40814777 - 40814719
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    |||||||||||||||||||||||| ||| | |||||||||||||| |||||||||||||    
T  40814777 ttttagattcattcattaaatgatatatgtggtttataataaagatcatatatatcatt 40814719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 180 - 237
Target Start/End: Complemental strand, 36072678 - 36072621
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcat 237  Q
    ||||| |||||||||||||||||||||| |||| |||||||||||||||||| |||||    
T  36072678 ttttaaattcattcattaaatgatgtatgtagtctataataaagaccatatacatcat 36072621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 180 - 257
Target Start/End: Complemental strand, 55936095 - 55936018
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaat 257  Q
    |||||||||||||||||||||||||||| | ||  ||||||||||| ||||| ||||||||| |||| ||||| ||||    
T  55936095 ttttagattcattcattaaatgatgtatgtggtcgataataaagacgatatacatcatttaatgaatgaatctaaaat 55936018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 32599588 - 32599537
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatata 231  Q
    ||||||||||||| |||||||||||||| | |||||||||||||||||||||    
T  32599588 ttttagattcatttattaaatgatgtatgtggtttataataaagaccatata 32599537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 238
Target Start/End: Complemental strand, 38298203 - 38298140
Alignment:
Q  175 ttattttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    |||| ||||||||||||||||||| ||| |||| | ||||||||||||||||||||| ||||||    
T  38298203 ttatattttagattcattcattaattgaagtatgtggtttataataaagaccatatacatcatt 38298140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 259
Target Start/End: Original strand, 47308146 - 47308225
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgt 259  Q
    |||| |||||||||||| |||||||||||| ||||||||||||||||| ||| || ||| || |||| ||||| ||||||    
T  47308146 ttttggattcattcatttaatgatgtatatggtttataataaagaccaaataaataattaaatgaatgaatctaaaatgt 47308225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 34616247 - 34616313
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaat 246  Q
    ||||||||||||||||||||||||||||   |||||||||| |||| ||||| ||||||||| ||||    
T  34616247 ttttagattcattcattaaatgatgtatgcggtttataatacagactatatacatcatttaatgaat 34616313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 39235169 - 39235227
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||||||||| |||||||||||||| | |||||||||||||| |||||| ||||||    
T  39235169 ttttagattcatttattaaatgatgtatgtggtttataataaagatcatatacatcatt 39235227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 28702170 - 28702097
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatct 252  Q
    ||||||| |||||||||||||||| |||| |||| |||||||||||| | ||| ||||||||| |||| |||||    
T  28702170 tttttaggttcattcattaaatgacgtatgtagtctataataaagactacatacatcatttaatgaatgaatct 28702097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 240
Target Start/End: Original strand, 46462411 - 46462472
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcattta 240  Q
    |||||||||||||| | |||||||||||||| ||||||||||||||| | ||| ||||||||    
T  46462411 tttttagattcattaaataaatgatgtatatggtttataataaagactacatacatcattta 46462472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 52914030 - 52914107
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaat 257  Q
    |||||||||||||||| |||||||||||||||| | || || |||||| ||| ||||||||| |||| ||||| ||||    
T  52914030 ttttagattcattcatgaaatgatgtatatagtctttattatagaccacatacatcatttaatgaatgaatctaaaat 52914107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 294
Target Start/End: Complemental strand, 56328558 - 56328444
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtagnnnnnnngcttataatag 279  Q
    ||||||||||||||||| ||||||| ||||||| | || || |||||| ||| |||||| || |||| || || ||||||||       ||||||| |||    
T  56328558 ttttagattcattcatttaatgatgcatatagtctttattatagaccacatacatcattaaatgaatgaacctaaaatgtagtttttttgcttatattag 56328459  T
Q  280 tgaccggagggtgta 294  Q
    |||||||||||||||    
T  56328458 tgaccggagggtgta 56328444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 2865076 - 2865016
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcattta 240  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| |||||| ||||||||    
T  2865076 ttttagattaattcattaaatgatgtatatagtttttattatagatcatatacatcattta 2865016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 10572753 - 10572825
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatct 252  Q
    ||||||||||||||||| |||||||||| | || ||||||||||| |||||| |||||| |  ||||||||||    
T  10572753 ttttagattcattcattgaatgatgtatgtggtctataataaagatcatatacatcattaattgaataaatct 10572825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 260
Target Start/End: Complemental strand, 16171018 - 16170938
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgta 260  Q
    ||||||||| ||| |||||||||||||| |||| |||||||||||||||||| | |||| |  |||| ||||| |||||||    
T  16171018 ttttagatttattaattaaatgatgtatgtagtctataataaagaccatatacaccattaattgaatgaatctaaaatgta 16170938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 18423998 - 18423942
Alignment:
Q  182 ttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||| ||||||||||||||||||||  ||||||||||||| |||||| ||||||    
T  18423998 ttagatttattcattaaatgatgtatatgatttataataaagatcatatacatcatt 18423942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 20598289 - 20598349
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcattta 240  Q
    |||||||| |||||| |||||||||||||| || || ||||||||||| ||||||||||||    
T  20598289 ttttagatacattcaataaatgatgtatattgtctacaataaagaccacatatatcattta 20598349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 21224793 - 21224721
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatct 252  Q
    |||||||||||||||||||||||||||  | |||||||||||||| ||  || ||||||||| |||| |||||    
T  21224793 ttttagattcattcattaaatgatgtacgtggtttataataaagatcacctacatcatttaatgaatgaatct 21224721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 260
Target Start/End: Complemental strand, 27537164 - 27537084
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgta 260  Q
    ||||| |||||||||||||||||||||| | | |||||||||||| ||  || ||||||||| |||| ||||| |||||||    
T  27537164 ttttaaattcattcattaaatgatgtatgttggttataataaagatcacttacatcatttaatgaatgaatctaaaatgta 27537084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 294
Target Start/End: Original strand, 56328482 - 56328595
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtagnnnnnnngcttataatag 279  Q
    |||||| |||||||||| |||||||||| | || |||||||||||| ||||  |||||| || |||| ||||| ||||||||       ||||||| |||    
T  56328482 ttttaggttcattcatttaatgatgtatgtggtctataataaagactatatgcatcattaaatgaatgaatctaaaatgtag-ttttttgcttatattag 56328580  T
Q  280 tgaccggagggtgta 294  Q
    |||||||||||||||    
T  56328581 tgaccggagggtgta 56328595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 259
Target Start/End: Complemental strand, 36786258 - 36786179
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgt 259  Q
    |||| ||||||||||| ||||||||||| | ||||||||||||||| ||||| |||||| |  |||| ||||| ||||||    
T  36786258 ttttggattcattcatcaaatgatgtatgtggtttataataaagactatatacatcattaattgaatgaatctaaaatgt 36786179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 259
Target Start/End: Original strand, 39533788 - 39533867
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgt 259  Q
    ||||||||||||| ||||||||||||||||| | | || || ||| || ||| ||||||||| |||||||||| ||||||    
T  39533788 ttttagattcatttattaaatgatgtatataatctttattatagatcacatacatcatttaatgaataaatctaaaatgt 39533867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 4406273 - 4406331
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||||| |||||||||||||||||| | || |||||||||||||| ||| ||||||    
T  4406273 ttttagatttattcattaaatgatgtatgtggtctataataaagaccacatacatcatt 4406331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 12912641 - 12912699
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||||| |||||||||||||||||||| || ||||||||| | ||||||| |||||    
T  12912641 ttttagatttattcattaaatgatgtatatggtatataataaaaatcatatatgtcatt 12912699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 23003994 - 23004052
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    |||||||||| |||||||||| |||||| |||| ||||||||||| |||||| ||||||    
T  23003994 ttttagattcgttcattaaataatgtatgtagtctataataaagatcatatacatcatt 23004052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 33694077 - 33694019
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    |||||| |||||||||||||| |||||| | || |||||||||||||||||| ||||||    
T  33694077 ttttaggttcattcattaaattatgtatgtggtctataataaagaccatatacatcatt 33694019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 237
Target Start/End: Original strand, 35151688 - 35151750
Alignment:
Q  175 ttattttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcat 237  Q
    |||| ||||||||||||||||||||| || |||||| | |||||||||||| ||||| |||||    
T  35151688 ttatattttagattcattcattaaataatatatataatctataataaagactatatacatcat 35151750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 38382008 - 38382074
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaat 246  Q
    ||||||||||||| |||||||||||||| | |||||||||| |||| | ||| ||||||||| ||||    
T  38382008 ttttagattcattgattaaatgatgtatgtggtttataatacagactacatacatcatttaatgaat 38382074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 48402519 - 48402453
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaat 246  Q
    ||||||||||||||||||||||||||||   |||||||||| |||| | ||| ||||||||| ||||    
T  48402519 ttttagattcattcattaaatgatgtatgcggtttataatacagactacatacatcatttaatgaat 48402453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 49231386 - 49231328
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||||||||||||||||||||| || | || || |||||||| |||||||||||||    
T  49231386 ttttagattcattcattaaatgatgcatgtggtctacaataaagatcatatatatcatt 49231328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 56364434 - 56364368
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaat 246  Q
    ||||||||||||||||||||||||||||   |||||||||| |||| | ||| ||||||||| ||||    
T  56364434 ttttagattcattcattaaatgatgtatgcggtttataatacagactacatacatcatttaatgaat 56364368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 2582840 - 2582917
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaat 257  Q
    ||||||||| |||||||||||||||||| |||| ||||||||||  |||| | || |||||| |||| ||||| ||||    
T  2582840 ttttagattgattcattaaatgatgtatgtagtctataataaaggtcataaacataatttaatgaatgaatctaaaat 2582917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 21859591 - 21859518
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatct 252  Q
    |||||||||||||||||||||| | |||| |||  |||||||||||| | ||| ||||||||| |||| |||||    
T  21859591 tttttagattcattcattaaataacgtatgtagactataataaagactacatacatcatttaatgaatgaatct 21859518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 21915454 - 21915381
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatct 252  Q
    |||||||||||||||||||||| | |||| |||  |||||||||||| | ||| ||||||||| |||| |||||    
T  21915454 tttttagattcattcattaaataacgtatgtagactataataaagactacatacatcatttaatgaatgaatct 21915381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 213
Target Start/End: Complemental strand, 23568488 - 23568455
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtt 213  Q
    ||||||||||||||||||||||||||||||||||    
T  23568488 ttttagattcattcattaaatgatgtatatagtt 23568455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 261
Target Start/End: Complemental strand, 34616323 - 34616242
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtag 261  Q
    |||||||| |||||||||||||||||||||||| | || || | |||  ||| ||||||||| |||| ||||| ||||||||    
T  34616323 ttttagatacattcattaaatgatgtatatagtctgtattataaaccgcatacatcatttaatgaatgaatctaaaatgtag 34616242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 241
Target Start/End: Complemental strand, 39160922 - 39160861
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaa 241  Q
    ||||||||||||||||||||||||||||   |||||||||| |||| | ||| |||||||||    
T  39160922 ttttagattcattcattaaatgatgtatgcggtttataatacagactacatacatcatttaa 39160861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 241
Target Start/End: Original strand, 50371214 - 50371275
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaa 241  Q
    |||||||| ||||||||||||||||| | || | |||||||||||||||||  |||||||||    
T  50371214 ttttagatccattcattaaatgatgtgtgtaatctataataaagaccatatgcatcatttaa 50371275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 213
Target Start/End: Original strand, 55934672 - 55934705
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtt 213  Q
    ||||||||||||||||||||||||||||||||||    
T  55934672 ttttagattcattcattaaatgatgtatatagtt 55934705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 55936019 - 55936096
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaat 257  Q
    |||||||||||||||||||||||||||||| || | || ||  ||||| ||| ||||||||| |||| ||||| ||||    
T  55936019 ttttagattcattcattaaatgatgtatatcgtctttattatcgaccacatacatcatttaatgaatgaatctaaaat 55936096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 4484180 - 4484124
Alignment:
Q  182 ttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    |||||||  ||||||||||||||||| | || |||||||||||||||||| ||||||    
T  4484180 ttagatttgttcattaaatgatgtatgtggtctataataaagaccatatacatcatt 4484124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 5535743 - 5535783
Alignment:
Q  177 attttttagattcattcattaaatgatgtatatagtttata 217  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  5535743 attttttagattcattcaataaatgatgtatgtagtttata 5535783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 260
Target Start/End: Complemental strand, 24798235 - 24798155
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgta 260  Q
    ||||| |||||||||||||||||||||  | || ||||||||||| |||||| | |||| || |||||||| | |||||||    
T  24798235 ttttaaattcattcattaaatgatgtacgtggtctataataaagatcatatacaccattaaatgaataaatataaaatgta 24798155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 175 - 238
Target Start/End: Original strand, 27628401 - 27628464
Alignment:
Q  175 ttattttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    |||||||||||||| ||||||| |||||||||| | ||| ||||||  ||||||| ||||||||    
T  27628401 ttattttttagatttattcatttaatgatgtatgtggttcataatatggaccataaatatcatt 27628464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 259
Target Start/End: Complemental strand, 39533864 - 39533785
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgt 259  Q
    ||||||||| |||||||||||||||||| |  | |||||||||||  ||||| |||||||||  ||| ||||| ||||||    
T  39533864 ttttagatttattcattaaatgatgtatgtgatctataataaagattatatacatcatttaataaatgaatctaaaatgt 39533785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 227
Target Start/End: Original strand, 52281150 - 52281197
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagacca 227  Q
    ||||| ||||||||| |||||||||||| |||| ||||||||||||||    
T  52281150 ttttatattcattcaataaatgatgtatgtagtatataataaagacca 52281197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 54931927 - 54931876
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatata 231  Q
    |||||||||||||||||||||||||||||  || ||||||||| | ||||||    
T  54931927 ttttagattcattcattaaatgatgtatacggtatataataaaaatcatata 54931876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 241
Target Start/End: Complemental strand, 4386431 - 4386370
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaa 241  Q
    |||||||||||||||| |||||||| ||| |||||||| ||| |||||| ||| |||||||||    
T  4386431 tttttagattcattcaataaatgatctatgtagtttat-atatagaccacatacatcatttaa 4386370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 5816647 - 5816589
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    |||||||||||||||||||||||| ||| |  | ||||||||||| |||||| ||||||    
T  5816647 ttttagattcattcattaaatgatatatgtgatctataataaagatcatatacatcatt 5816589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 8826897 - 8826955
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||| ||| |||||||||||||||||| |  | |||||||||||||||||| ||||||    
T  8826897 ttttaaatttattcattaaatgatgtatgtgatctataataaagaccatatacatcatt 8826955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 17655082 - 17655128
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagac 225  Q
    |||||||||||||||||||||| | ||||||||  ||||||||||||    
T  17655082 tttttagattcattcattaaataacgtatatagactataataaagac 17655128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 19878318 - 19878376
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    |||||||||||||||||||| ||||||| | |  ||||||||||| |||||| ||||||    
T  19878318 ttttagattcattcattaaacgatgtatgtggactataataaagatcatatacatcatt 19878376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 24133706 - 24133648
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||| ||||||| ||||| ||||||| || ||||||||||||||  ||||||||||||    
T  24133706 ttttaaattcatttattaattgatgtacatggtttataataaagattatatatatcatt 24133648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 24448773 - 24448715
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||| ||||||| |||||||||||||| |  |||||||||||||| ||||| ||||||    
T  24448773 ttttacattcattaattaaatgatgtatgtgatttataataaagactatatacatcatt 24448715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 46518807 - 46518865
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    |||||||||||||||||||||| | ||||| || ||||||||  |||||||| ||||||    
T  46518807 ttttagattcattcattaaatgttatatattgtctataataactaccatatacatcatt 46518865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 231
Target Start/End: Complemental strand, 46803515 - 46803465
Alignment:
Q  181 tttagattcattcattaaatgatgtatatagtttataataaagaccatata 231  Q
    ||||||||| |||||||||| |||||| | ||||||||||||||| |||||    
T  46803515 tttagattctttcattaaattatgtatgtggtttataataaagactatata 46803465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 47181591 - 47181657
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaat 246  Q
    ||||| ||||||||||||||||||||||   |||||||||| |||| | ||| ||||||||| ||||    
T  47181591 ttttaaattcattcattaaatgatgtatgcggtttataatacagactacatacatcatttaatgaat 47181657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 47787048 - 47787002
Alignment:
Q  175 ttattttttagattcattcattaaatgatgtatatagtttataataa 221  Q
    |||| ||||| |||||||||||||||||| ||||| |||||||||||    
T  47787048 ttatattttatattcattcattaaatgatatatatggtttataataa 47787002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 54057675 - 54057733
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||||||||||| |||||||||| | | |||||||||||| |||| ||| ||||||    
T  54057675 ttttagattcattcaataaatgatgtttgtggtttataataaaaaccacataaatcatt 54057733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 2401071 - 2401144
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatct 252  Q
    |||||| ||||||||| |||||||||||| | ||  |||||| |||| | ||| ||||||||| ||||||||||    
T  2401071 tttttaaattcattcaataaatgatgtatttggtcaataatatagactaaatacatcatttaatgaataaatct 2401144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 209
Target Start/End: Complemental strand, 12168725 - 12168696
Alignment:
Q  180 ttttagattcattcattaaatgatgtatat 209  Q
    ||||||||||||||||||||||||||||||    
T  12168725 ttttagattcattcattaaatgatgtatat 12168696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 261
Target Start/End: Original strand, 16468236 - 16468317
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtag 261  Q
    |||||| |||||| ||| |||||||||| | || ||||||||||| ||| |  |||||| || |||||||||| ||||||||    
T  16468236 ttttaggttcatttatttaatgatgtatgtggtctataataaagatcatgtgaatcattaaatgaataaatctaaaatgtag 16468317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 18327965 - 18328038
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatct 252  Q
    ||||||| |||||||||| |||||||||||| ||| ||||||  ||||| ||| |||||| || |||| |||||    
T  18327965 tttttaggttcattcatttaatgatgtatatggttcataatatggaccacatacatcattaaatgaatgaatct 18328038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 18437434 - 18437361
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatct 252  Q
    ||||||| |||||||||| |||||||||||| ||| ||||||  ||||| ||| |||||| || |||| |||||    
T  18437434 tttttaggttcattcatttaatgatgtatatggttcataatatggaccacatacatcattaaatgaatgaatct 18437361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 20787665 - 20787624
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataata 220  Q
    |||||||||||||||||| |||||||||| | ||||||||||    
T  20787665 tttttagattcattcatttaatgatgtatgtggtttataata 20787624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 21587027 - 21586986
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataata 220  Q
    |||||||||||||||| |||||||||||| |||| |||||||    
T  21587027 tttttagattcattcaataaatgatgtatgtagtctataata 21586986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 21859513 - 21859546
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagt 212  Q
    ||||||||||||||||||||||||||||| ||||    
T  21859513 tttttagattcattcattaaatgatgtatgtagt 21859546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 21915376 - 21915409
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagt 212  Q
    ||||||||||||||||||||||||||||| ||||    
T  21915376 tttttagattcattcattaaatgatgtatgtagt 21915409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 237
Target Start/End: Complemental strand, 22493684 - 22493627
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcat 237  Q
    ||||| ||||||| |||||||||||||| |  | |||||||||||||||||| |||||    
T  22493684 ttttatattcatttattaaatgatgtatgtgatctataataaagaccatatacatcat 22493627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 28702092 - 28702125
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagt 212  Q
    ||||||||||||||||||||||||||||| ||||    
T  28702092 tttttagattcattcattaaatgatgtatgtagt 28702125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 238
Target Start/End: Original strand, 36469900 - 36469961
Alignment:
Q  177 attttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||||||| |||||||| |||||||||| | ||| |||||| |||||| ||| ||||||    
T  36469900 attttttagatccattcatttaatgatgtatgtggttcataatatagaccacatacatcatt 36469961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 259
Target Start/End: Complemental strand, 40952461 - 40952377
Alignment:
Q  175 ttattttttagattcattca-ttaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgt 259  Q
    |||| ||||||||||||||| |||||| ||||||||  ||| || || |||||| ||||||||||||| |||| ||||| ||||||    
T  40952461 ttatattttagattcattcaattaaat-atgtatatgatttttattatagaccacatatatcatttaatgaatgaatctaaaatgt 40952377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 261
Target Start/End: Original strand, 56364358 - 56364439
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtag 261  Q
    |||||||| ||||||||||||||||||| |||| | || || | |||  ||| ||||||||| |||| ||||| ||||||||    
T  56364358 ttttagatacattcattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaatctaaaatgtag 56364439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 260
Target Start/End: Complemental strand, 3511817 - 3511737
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgta 260  Q
    ||||| ||| ||||||||||||||| || | || ||||||||||| |||||| |||||| |  |||| ||||| |||||||    
T  3511817 ttttaaatttattcattaaatgatgaatgtggtctataataaagatcatatacatcattaattgaatgaatctaaaatgta 3511737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 4484106 - 4484178
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatct 252  Q
    ||||||||||||||| | |||||||||||| || | || || |||||| ||| ||||||||| ||| ||||||    
T  4484106 ttttagattcattcaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaacaaatct 4484178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 207
Target Start/End: Complemental strand, 6462825 - 6462793
Alignment:
Q  175 ttattttttagattcattcattaaatgatgtat 207  Q
    |||||||||||||||||||| ||||||||||||    
T  6462825 ttattttttagattcattcaataaatgatgtat 6462793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 6975035 - 6974983
Alignment:
Q  186 attcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||||||| |||||||||| |||| ||||||||||| || ||| ||||||    
T  6975035 attcattcatttaatgatgtatgtagtctataataaagatcaaatacatcatt 6974983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 10308342 - 10308290
Alignment:
Q  186 attcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||||| |||||||||||| | || |||||||||||| ||||| ||||||    
T  10308342 attcattcaataaatgatgtatgtggtctataataaagactatatacatcatt 10308290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 21884051 - 21884099
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccat 228  Q
    |||||| |||||||||| |||||||||| | || |||||||||||||||    
T  21884051 ttttaggttcattcatttaatgatgtatgtggtctataataaagaccat 21884099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 207
Target Start/End: Complemental strand, 26636553 - 26636521
Alignment:
Q  175 ttattttttagattcattcattaaatgatgtat 207  Q
    |||||||||||||||||||| ||||||||||||    
T  26636553 ttattttttagattcattcaataaatgatgtat 26636521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 207
Target Start/End: Complemental strand, 31808435 - 31808403
Alignment:
Q  175 ttattttttagattcattcattaaatgatgtat 207  Q
    |||||||||||||||||||||| ||||||||||    
T  31808435 ttattttttagattcattcatttaatgatgtat 31808403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 31860682 - 31860730
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagacca 227  Q
    |||||||||||||||||| |||||||||| | ||| |||||| ||||||    
T  31860682 tttttagattcattcatttaatgatgtatgtggttcataatatagacca 31860730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 246
Target Start/End: Original strand, 35967411 - 35967479
Alignment:
Q  178 ttttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaat 246  Q
    |||||||||||||||| || |||||||||| | ||| ||||||  ||||| ||| ||||||||| ||||    
T  35967411 ttttttagattcattcgtttaatgatgtatgtggttaataatatggaccacatacatcatttaatgaat 35967479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 260
Target Start/End: Complemental strand, 38382084 - 38382004
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgta 260  Q
    |||||||| ||||||||||||||||||| |||| | || || | |||| ||| |||||||||  ||| ||||| |||||||    
T  38382084 ttttagatacattcattaaatgatgtatgtagtctgtattataaaccacatacatcatttaatcaatgaatctaaaatgta 38382004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 54106507 - 54106567
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcattta 240  Q
    ||||||||||||||| |||||||||||| | || || |||||||| || ||| ||||||||    
T  54106507 ttttagattcattcaataaatgatgtatgttgtctacaataaagatcacatacatcattta 54106567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 54508196 - 54508248
Alignment:
Q  175 ttattttttagattcattcattaaatgatgtatatagtttataataaagacca 227  Q
    |||| ||||||||||||||| |||||||||||| | || || |||||||||||    
T  54508196 ttatattttagattcattcaataaatgatgtatgttgtctacaataaagacca 54508248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 180 - 257
Target Start/End: Complemental strand, 15517198 - 15517121
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaat 257  Q
    |||||||||||||||||||||||||||| | || |||||||||||| ||||| ||||||||| |||| ||||| ||||    
T  15517198 ttttagattcattcattaaatgatgtatgtggtctataataaagacgatatacatcatttaatgaatgaatctaaaat 15517121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 32254853 - 32254930
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaat 257  Q
    ||||||| |||||| ||||||||||||| |||| |||||||||||||| ||| ||||||||| |||| ||||| ||||    
T  32254853 ttttagaatcattcgttaaatgatgtatgtagtctataataaagaccacatacatcatttaatgaatgaatctaaaat 32254930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 180 - 257
Target Start/End: Complemental strand, 34379843 - 34379766
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaat 257  Q
    |||||||||||||||||||||||||||| | ||  ||||||||||| ||||| ||||||||| |||| ||||| ||||    
T  34379843 ttttagattcattcattaaatgatgtatgtggtcgataataaagacgatatacatcatttaatgaatgaatctaaaat 34379766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 7158364 - 7158292
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatct 252  Q
    ||||||||||||||| |||||||||||||| || || ||||||||||| ||| ||||||||  ||||||||||    
T  7158364 ttttagattcattcaataaatgatgtatattgtctacaataaagaccacatacatcatttattgaataaatct 7158292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 259
Target Start/End: Original strand, 12104777 - 12104856
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgt 259  Q
    ||||| ||||||| |||||||||||||| |  |||||||||||||| |||||||| ||||||  ||||||||| ||||||    
T  12104777 ttttaaattcatttattaaatgatgtatgtgatttataataaagactatatatatgatttaataaataaatctaaaatgt 12104856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 14218229 - 14218287
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||||||||| ||||||| ||| ||||||| |||||||||||||||||| ||||||    
T  14218229 ttttagattcatttattaaataatgaatatagtatataataaagaccatatacatcatt 14218287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 294
Target Start/End: Original strand, 8145981 - 8146094
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtagnnnnnnngcttataatag 279  Q
    |||||| |||||||||| |||||||||| | || ||||||||||||||| || |||||| || |||| ||||| |||||||        ||||||| |||    
T  8145981 ttttaggttcattcatttaatgatgtatgtggtctataataaagaccatgtacatcattaaatgaatgaatctaaaatgta-attttttgcttatattag 8146079  T
Q  280 tgaccggagggtgta 294  Q
    |||||||||||||||    
T  8146080 tgaccggagggtgta 8146094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 15517122 - 15517199
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaat 257  Q
    |||||||||||||||||||||||||||||| || | || || |||||| ||| ||||||||| |||| ||||| ||||    
T  15517122 ttttagattcattcattaaatgatgtatatcgtctttattatagaccacatacatcatttaatgaatgaatctaaaat 15517199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 225
Target Start/End: Complemental strand, 26527298 - 26527253
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagac 225  Q
    |||||||||||||||||||||||||||| | |||||||||||||||    
T  26527298 ttttagattcattcattaaatgatgtatgtggtttataataaagac 26527253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 294
Target Start/End: Original strand, 31398258 - 31398371
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtagnnnnnnngcttataatag 279  Q
    |||||| |||||||||| |||||||||| | || ||||||||||||||| |  |||||| || |||| ||||| |||||||        |||||||||||    
T  31398258 ttttaggttcattcatttaatgatgtatgtggtctataataaagaccatgtgcatcattaaatgaatgaatctaaaatgta-aacttttgcttataatag 31398356  T
Q  280 tgaccggagggtgta 294  Q
    |||||||||||||||    
T  31398357 tgaccggagggtgta 31398371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 3012468 - 3012408
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcattta 240  Q
    ||||||||||||||| |||||||||||| | ||||| ||||||||||| ||| ||||||||    
T  3012468 ttttagattcattcaataaatgatgtatgttgtttacaataaagaccacatacatcattta 3012408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 294
Target Start/End: Original strand, 28554979 - 28555092
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtagnnnnnnngcttataatag 279  Q
    |||||| |||||||||| |||||||||||| || ||||||||||||||| |  |||||| ||  ||| ||||| ||||||||       |||||||||||    
T  28554979 ttttaggttcattcatttaatgatgtatatggtctataataaagaccatgtgcatcattaaataaatgaatctaaaatgtag-atttttgcttataatag 28555077  T
Q  280 tgaccggagggtgta 294  Q
    ||||| |||||||||    
T  28555078 tgaccagagggtgta 28555092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 259
Target Start/End: Original strand, 34379767 - 34379846
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgt 259  Q
    |||||||||||||||||||||||||||||| || | || ||  ||||| ||| ||||||||| |||| ||||| ||||||    
T  34379767 ttttagattcattcattaaatgatgtatatcgtctttattatcgaccacatacatcatttaatgaatgaatctaaaatgt 34379846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 10258336 - 10258394
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||||||||| ||||||||||||| || || |||||||| ||||||||| ||||||    
T  10258336 ttttagattcatttattaaatgatgtacatggtctataataatgaccatatacatcatt 10258394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 241
Target Start/End: Complemental strand, 6263459 - 6263398
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaa 241  Q
    |||||||||| ||||||||||||||| | | || ||||||||||| |||||| |||||||||    
T  6263459 ttttagattccttcattaaatgatgtgtgtggtatataataaagatcatatacatcatttaa 6263398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 294
Target Start/End: Complemental strand, 8146057 - 8145943
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtagnnnnnnngcttataatag 279  Q
    ||||||||||||||||| ||||||||| || || | || || |||||| ||| |||||| || |||| || || ||||||||       ||||||| |||    
T  8146057 ttttagattcattcatttaatgatgtacatggtctttattatagaccacatacatcattaaatgaatgaacctaaaatgtagtttttttgcttatattag 8145958  T
Q  280 tgaccggagggtgta 294  Q
    |||||||||||||||    
T  8145957 tgaccggagggtgta 8145943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 14310629 - 14310581
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccat 228  Q
    ||||||||||||||||| |||||||||| | || |||||||||||||||    
T  14310629 ttttagattcattcatttaatgatgtatgtggtatataataaagaccat 14310581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 3199750 - 3199801
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatata 231  Q
    ||||| |||||||||||||||| ||||| | |||||||||||||| ||||||    
T  3199750 ttttaaattcattcattaaatgttgtatgtggtttataataaagatcatata 3199801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 31996607 - 31996556
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatata 231  Q
    |||||| |||||| |||||||||||||| |||| ||||||||| ||||||||    
T  31996607 ttttaggttcatttattaaatgatgtatgtagtctataataaataccatata 31996556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 259
Target Start/End: Complemental strand, 32254929 - 32254850
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgt 259  Q
    |||||||||||||||||||||||||||| | || | || || |||| | ||| |||||||||||||| | ||| ||||||    
T  32254929 ttttagattcattcattaaatgatgtatgtggtctttattatagactacatacatcatttaacgaatgattctaaaatgt 32254850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 13506942 - 13506884
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||| ||| ||||||||||||||| || |||| ||||||||||| |||||| ||||||    
T  13506942 ttttaaatttattcattaaatgatgcatctagtctataataaagatcatatacatcatt 13506884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 24111208 - 24111170
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttata 217  Q
    |||||||||| ||||| ||||||||||||||||||||||    
T  24111208 tttttagatttattcaataaatgatgtatatagtttata 24111170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 294
Target Start/End: Original strand, 6560689 - 6560802
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtagnnnnnnngcttataatag 279  Q
    |||||| |||||||||| |||||||||| | || |||||||||||| || |  |||||| || |||| ||||| |||||||        ||||||| |||    
T  6560689 ttttaggttcattcatttaatgatgtatgtggtctataataaagactatgtgcatcattaaatgaatgaatctaaaatgta-attttttgcttatattag 6560787  T
Q  280 tgaccggagggtgta 294  Q
    |||||||||||||||    
T  6560788 tgaccggagggtgta 6560802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 11745956 - 11745997
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataa 221  Q
    |||||||||||||||||||||||||||| | || ||||||||    
T  11745956 ttttagattcattcattaaatgatgtatgtggtatataataa 11745997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 240
Target Start/End: Original strand, 14173421 - 14173482
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcattta 240  Q
    |||||||||||||||| ||||||| |||| |||| |||||||  ||||| ||| ||||||||    
T  14173421 tttttagattcattcaataaatgaagtatgtagtctataatattgaccacatacatcattta 14173482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 240
Target Start/End: Original strand, 14177957 - 14178018
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcattta 240  Q
    |||||||||||||||| ||||||| |||| |||| |||||||  ||||| ||| ||||||||    
T  14177957 tttttagattcattcaataaatgaagtatgtagtctataatattgaccacatacatcattta 14178018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 238
Target Start/End: Original strand, 2157588 - 2157647
Alignment:
Q  181 tttagattcattcattaaatgatgtata--tagtttataataaagaccatatatatcatt 238  Q
    |||||||||||||||| |||||||||||  ||||||||||||  ||||| ||| ||||||    
T  2157588 tttagattcattcatttaatgatgtatatgtagtttataatatggaccacatacatcatt 2157647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 260
Target Start/End: Complemental strand, 2827667 - 2827587
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgta 260  Q
    ||||||||||||| ||||||||||| || | || ||||||||||  |||||| |||||| ||  ||| ||||| |||||||    
T  2827667 ttttagattcatttattaaatgatgcatgtggtctataataaagttcatatacatcattaaataaatgaatctaaaatgta 2827587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 6797479 - 6797439
Alignment:
Q  177 attttttagattcattcattaaatgatgtatatagtttata 217  Q
    ||||||||| ||||||||||||||| ||||| |||||||||    
T  6797479 attttttaggttcattcattaaatgttgtatttagtttata 6797439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 294
Target Start/End: Original strand, 18033387 - 18033500
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtagnnnnnnngcttataatag 279  Q
    |||||| |||||||||| |||||||||| | || ||||||||||||||| || |||||| || |||||||||| ||||||||       |||||||||||    
T  18033387 ttttaggttcattcatttaatgatgtatgtggtctataataaagaccatgtacatcattaaatgaataaatctaaaatgtag-atttttgcttataatag 18033485  T
Q  280 tgaccggagggtgta 294  Q
    |||||||||| ||||    
T  18033486 tgaccggaggatgta 18033500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 260
Target Start/End: Original strand, 22650888 - 22650968
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgta 260  Q
    ||||||||||||| |||||||||||||| | || |||||||||||||||||| |||||| ||  ||||||||| |||||||    
T  22650888 ttttagattcatttattaaatgatgtatgtggtctataataaagaccatatacatcattaaataaataaatctaaaatgta 22650968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 258
Target Start/End: Original strand, 1100089 - 1100167
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatg 258  Q
    |||||||||||||||||||||||||||| | || |||||||||||| | ||| ||||||||| |||| ||||| |||||    
T  1100089 ttttagattcattcattaaatgatgtatgtggtctataataaagactacatacatcatttaatgaattaatctaaaatg 1100167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 31963551 - 31963609
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||||||||| |||||||||||||| |||| |||||||||||||||||| ||||||    
T  31963551 ttttagattcatttattaaatgatgtatgtagtctataataaagaccatatacatcatt 31963609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 260
Target Start/End: Original strand, 3100437 - 3100517
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgta 260  Q
    ||||||||||||||| |||||||||||| |||| ||||||||||| |||||| |||||| |  |||| ||||| |||||||    
T  3100437 ttttagattcattcaataaatgatgtatgtagtctataataaagatcatatacatcattaattgaatgaatctaaaatgta 3100517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 295
Target Start/End: Complemental strand, 26141860 - 26141749
Alignment:
Q  183 tagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtagnnnnnnngcttataatagtga 282  Q
    |||||||||||||| |||||||||| | || ||||||||||||||| |  |||||| || |||| ||||| |||||||        ||||||||||||||    
T  26141860 tagattcattcatttaatgatgtatgtggtctataataaagaccatgtgcatcattaaatgaatgaatctaaaatgta-aacttttgcttataatagtga 26141762  T
Q  283 ccggagggtgtaa 295  Q
    |||||||||||||    
T  26141761 ccggagggtgtaa 26141749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 25773275 - 25773333
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    |||||||||||||||||||||||||||| |  | |||||||||||||||||| ||||||    
T  25773275 ttttagattcattcattaaatgatgtatttgatctataataaagaccatatacatcatt 25773333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 257
Target Start/End: Original strand, 27314506 - 27314584
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaat 257  Q
    |||||||||||||||||||||||| |||| |||| |||||||||||| | |||  |||||||| |||| ||||| ||||    
T  27314506 tttttagattcattcattaaatgacgtatgtagtctataataaagactacatacgtcatttaatgaatgaatctaaaat 27314584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 38370419 - 38370477
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    |||||||||| ||||||||||||||||| |||| ||||||||||| |||||| ||||||    
T  38370419 ttttagattcgttcattaaatgatgtatgtagtctataataaagatcatatacatcatt 38370477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 260
Target Start/End: Complemental strand, 1100165 - 1100085
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgta 260  Q
    ||||||||| |||||||||||||||||| |||| | || || |||||| ||| ||||||||| |||| ||||| |||||||    
T  1100165 ttttagattaattcattaaatgatgtatgtagtctttattatagaccacatacatcatttaatgaatgaatctaaaatgta 1100085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 294
Target Start/End: Complemental strand, 71364 - 71254
Alignment:
Q  182 ttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtagnnnnnnngcttataatagtg 281  Q
    |||||||||||||||||||| ||||| | || ||||||||||| |||||| |||||| |  |||| ||||| |||| |||       |||||||||||||    
T  71364 ttagattcattcattaaatg-tgtatgtggtctataataaagatcatatacatcattaattgaatgaatctaaaatatag-atttttgcttataatagtg 71267  T
Q  282 accggagggtgta 294  Q
    |||||||||||||    
T  71266 accggagggtgta 71254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 16602295 - 16602241
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatat 234  Q
    ||||||||||||| || |||| |||||| | ||||||||||||||||||||||||    
T  16602295 ttttagattcatttatgaaattatgtatgtggtttataataaagaccatatatat 16602241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 16899796 - 16899750
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagac 225  Q
    ||||||| |||||||||||||||||||||||| ||||||||| ||||    
T  16899796 tttttaggttcattcattaaatgatgtatataatttataatatagac 16899750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 17625672 - 17625738
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaat 246  Q
    ||||||||||||||||||||||||||||   |||||||||| |||| | ||| ||||||||| ||||    
T  17625672 ttttagattcattcattaaatgatgtatgcggtttataatacagactacatacatcatttaatgaat 17625738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 25772264 - 25772218
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagac 225  Q
    |||||||||||||||||||||| | ||||||||| ||||||||||||    
T  25772264 tttttagattcattcattaaataacgtatatagtctataataaagac 25772218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 238
Target Start/End: Original strand, 566322 - 566383
Alignment:
Q  177 attttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    |||||||||||||||||||| ||||||| || | ||| |||||| |||||| ||||||||||    
T  566322 attttttagattcattcatttaatgatgcatgtggttcataatatagaccacatatatcatt 566383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 259
Target Start/End: Complemental strand, 11795838 - 11795765
Alignment:
Q  186 attcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgt 259  Q
    |||||||||||||||||| ||| | || |||||||||||||||||| |||||| |  |||| ||||| ||||||    
T  11795838 attcattcattaaatgatatatgtggtctataataaagaccatatacatcattaattgaatgaatctaaaatgt 11795765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 260
Target Start/End: Complemental strand, 14274243 - 14274162
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgta 260  Q
    ||||||| |||||||||| |||||||||| ||||||||||||  ||||| ||| |||||| || |||| ||| | |||||||    
T  14274243 tttttaggttcattcatttaatgatgtatgtagtttataatatggaccacatacatcattaaatgaatgaatttaaaatgta 14274162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 294
Target Start/End: Original strand, 5259417 - 5259530
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtagnnnnnnngcttataatag 279  Q
    |||||| |||||||||| |||||||||| | || |||||||||||| || |  |||||| || |||| ||||| ||||||||       ||||||| |||    
T  5259417 ttttaggttcattcatttaatgatgtatgtggtctataataaagactatgtgcatcattaaatgaatgaatctaaaatgtag-ttttttgcttatattag 5259515  T
Q  280 tgaccggagggtgta 294  Q
    |||||||||||||||    
T  5259516 tgaccggagggtgta 5259530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 25408575 - 25408635
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcattta 240  Q
    ||||||||||||||| |||||||||||| | || || ||||||||||| ||| ||||||||    
T  25408575 ttttagattcattcaataaatgatgtatgttgtctacaataaagaccacatacatcattta 25408635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 260
Target Start/End: Original strand, 35032302 - 35032382
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgta 260  Q
    |||||||||||||||||||||||||||| |||| ||||| ||| | |||||| || ||| |  |||| ||||| |||||||    
T  35032302 ttttagattcattcattaaatgatgtatgtagtctataacaaaaatcatatacataattaattgaatgaatctaaaatgta 35032382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 222
Target Start/End: Original strand, 1996878 - 1996921
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaa 222  Q
    |||||||||||||||||||||||| |||| |||| |||||||||    
T  1996878 tttttagattcattcattaaatgacgtatgtagtctataataaa 1996921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 238
Target Start/End: Original strand, 4162834 - 4162893
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||| |||||||||| |||||||||||| ||| |||||| |||||| ||| ||||||    
T  4162834 tttttaggttcattcatttaatgatgtatatggttcataatatagaccacatacatcatt 4162893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 240
Target Start/End: Original strand, 12922401 - 12922464
Alignment:
Q  177 attttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcattta 240  Q
    |||||||| ||||||||| |||||||||||| |  || |||||| |||||| ||||||||||||    
T  12922401 attttttatattcattcaataaatgatgtatttgtttaataatatagaccaaatatatcattta 12922464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 175 - 246
Target Start/End: Complemental strand, 15062398 - 15062327
Alignment:
Q  175 ttattttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaat 246  Q
    |||| ||||| ||||||||||| ||||||||||||||||| ||  | |||||||||| || |||||| ||||    
T  15062398 ttatattttaaattcattcatttaatgatgtatatagtttttataatagaccatataaataatttaatgaat 15062327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 22474049 - 22474006
Alignment:
Q  177 attttttagattcattcattaaatgatgtatatagtttataata 220  Q
    |||||||||||||||||||| |||||||||| | ||||||||||    
T  22474049 attttttagattcattcatttaatgatgtatgttgtttataata 22474006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 30371365 - 30371416
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatata 231  Q
    ||||||||||||| ||||||| |||||| |  ||||||||||||||||||||    
T  30371365 ttttagattcatttattaaataatgtatgtgatttataataaagaccatata 30371416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 175 - 238
Target Start/End: Original strand, 30489123 - 30489186
Alignment:
Q  175 ttattttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||||||| |||||| | | ||| |||||||||||| |||||| |||||| ||||||||||    
T  30489123 ttattttttaggttcatttaattaattatgtatatagttcataatatagaccacatatatcatt 30489186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 37067644 - 37067695
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatata 231  Q
    |||||||||||||||||||||||||||| | || ||| ||||| ||||||||    
T  37067644 ttttagattcattcattaaatgatgtatgtggtgtatgataaataccatata 37067695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 41005700 - 41005751
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatata 231  Q
    ||||||||||||| |||||||||||||| |||| |||| ||| |||||||||    
T  41005700 ttttagattcatttattaaatgatgtatgtagtctatactaacgaccatata 41005751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 43438363 - 43438312
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatata 231  Q
    ||||||||||||||||||||||||| || | || ||| ||||||||||||||    
T  43438363 ttttagattcattcattaaatgatgcatgtcgtctatgataaagaccatata 43438312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 11795768 - 11795834
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaat 246  Q
    ||||||||||||||| | |||||||||||| || | || || |||||| ||||||||||||| ||||    
T  11795768 ttttagattcattcaattaatgatgtatatggtctttattatagaccacatatatcatttaatgaat 11795834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 218
Target Start/End: Complemental strand, 18652873 - 18652835
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataa 218  Q
    |||||||||||||||||||||||||||| | ||||||||    
T  18652873 ttttagattcattcattaaatgatgtatgtggtttataa 18652835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 237
Target Start/End: Complemental strand, 31927149 - 31927087
Alignment:
Q  175 ttattttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcat 237  Q
    |||||||||||||||||||| ||||||||||| || || || |||| ||| |||||| |||||    
T  31927149 ttattttttagattcattcaataaatgatgtacatggtctacaatatagatcatatacatcat 31927087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 32911601 - 32911559
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataa 221  Q
    ||||||| ||||||||||||||||||||| |||| ||||||||    
T  32911601 tttttaggttcattcattaaatgatgtatttagtctataataa 32911559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 36169151 - 36169093
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||| ||| |||||||||||||| ||| ||||||||||||||| |||| || ||||||    
T  36169151 ttttatatttattcattaaatgatatatgtagtttataataaagtccatgtacatcatt 36169093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 5226128 - 5226055
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatct 252  Q
    |||||||||||||||||| |||||||||| | ||| ||||||  ||||| ||| |||||| || |||| |||||    
T  5226128 tttttagattcattcatttaatgatgtatgtggttcataatatggaccacatacatcattaaatgaatgaatct 5226055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 213
Target Start/End: Original strand, 8042639 - 8042672
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtt 213  Q
    |||||||||||||||||||||| |||||||||||    
T  8042639 ttttagattcattcattaaatggtgtatatagtt 8042672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 261
Target Start/End: Complemental strand, 17625748 - 17625667
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtag 261  Q
    |||||||| ||||||||||||||||||| |||| | || || | |||  ||| ||||||||| |||| ||||| ||||||||    
T  17625748 ttttagatacattcattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaatctaaaatgtag 17625667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 241
Target Start/End: Complemental strand, 18254797 - 18254736
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaa 241  Q
    ||||||| | ||| |||||||||||||||| || ||||||||||| || ||| |||||||||    
T  18254797 ttttagaattatttattaaatgatgtatatggtctataataaagatcacatacatcatttaa 18254736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 36897774 - 36897827
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatata 233  Q
    ||||| ||||||| | |||||||||||| | ||||||||||||||||| |||||    
T  36897774 ttttaaattcattaaataaatgatgtatgtggtttataataaagaccacatata 36897827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 238
Target Start/End: Original strand, 43176280 - 43176341
Alignment:
Q  177 attttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||||| |||||||||| |||||||||||| ||| ||| || |||||| ||| ||||||    
T  43176280 attttttaggttcattcatttaatgatgtatatggttcatattatagaccagatacatcatt 43176341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 5089485 - 5089557
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatct 252  Q
    ||||||||||||||||| ||||||| || | ||| ||||||  ||||| ||| |||||| || ||||||||||    
T  5089485 ttttagattcattcatttaatgatgaatgttgttcataatatggaccacatacatcattaaatgaataaatct 5089557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 207
Target Start/End: Complemental strand, 6114847 - 6114819
Alignment:
Q  179 tttttagattcattcattaaatgatgtat 207  Q
    |||||||||||||||||||||||||||||    
T  6114847 tttttagattcattcattaaatgatgtat 6114819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 10495240 - 10495280
Alignment:
Q  177 attttttagattcattcattaaatgatgtatatagtttata 217  Q
    |||||||||||||||||| |||||||||||| | |||||||    
T  10495240 attttttagattcattcaataaatgatgtatgtggtttata 10495280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 20518203 - 20518251
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccat 228  Q
    ||||||||| ||||||| |||||||||| | || |||||||||||||||    
T  20518203 ttttagatttattcatttaatgatgtatgtggtctataataaagaccat 20518251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 28518830 - 28518786
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaaga 224  Q
    ||||||||| |||||||||||||||||| | || |||||||||||    
T  28518830 ttttagattgattcattaaatgatgtatgtggtctataataaaga 28518786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 207
Target Start/End: Original strand, 42486185 - 42486217
Alignment:
Q  175 ttattttttagattcattcattaaatgatgtat 207  Q
    |||||||||||||||||||||| ||||||||||    
T  42486185 ttattttttagattcattcatttaatgatgtat 42486217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 207
Target Start/End: Complemental strand, 43506203 - 43506175
Alignment:
Q  179 tttttagattcattcattaaatgatgtat 207  Q
    |||||||||||||||||||||||||||||    
T  43506203 tttttagattcattcattaaatgatgtat 43506175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 146000 - 146058
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    |||||||||||||||||||||||||||| | || || ||||||||||||||| ||||||    
T  146000 ttttagattcattcattaaatgatgtatgtggtctaaaataaagaccatatacatcatt 146058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 230
Target Start/End: Complemental strand, 216381 - 216331
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatat 230  Q
    ||||| ||| |||||||||||||||||| | |||||||||||||| |||||    
T  216381 ttttaaattaattcattaaatgatgtatgtcgtttataataaagatcatat 216331  T

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Target: scaffold0009; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 261
Target Start/End: Original strand, 7689 - 7770
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgtag 261  Q
    |||||| ||| |||||| |||||||||| | || ||||||||||||||| |  |||||| || |||| ||||| ||||||||    
T  7689 ttttaggttcgttcatttaatgatgtatgtggtctataataaagaccatgtgcatcattaaatgaatgaatctaaaatgtag 7770  T

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Target: scaffold0065 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 241
Target Start/End: Complemental strand, 39217 - 39156
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaa 241  Q
    |||||||||||||||||||||||||||||| || |||||||||||  ||||| || ||||||    
T  39217 ttttagattcattcattaaatgatgtatatggtctataataaagaatatatacattatttaa 39156  T

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Target: scaffold0065; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 259
Target Start/End: Original strand, 36885 - 36965
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgt 259  Q
    ||||||||||||||||||||||||||||| | ||  |||| | ||| || ||| ||||||||| |||| ||||| ||||||    
T  36885 tttttagattcattcattaaatgatgtatttggtcaataacatagatcaaatacatcatttaatgaatgaatctaaaatgt 36965  T

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Target: scaffold0110 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 10198 - 10143
Alignment:
Q  177 attttttagattcattcattaaatgatgtatatagtttataataaagaccatatat 232  Q
    |||||||||||||||||||| |||||||||| | ||| |||||| |||||||||||    
T  10198 attttttagattcattcatttaatgatgtatgtggttcataatatagaccatatat 10143  T

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Target: scaffold0110; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 17935 - 17880
Alignment:
Q  177 attttttagattcattcattaaatgatgtatatagtttataataaagaccatatat 232  Q
    |||||||||||||||||||| |||||||||| | ||| |||||| |||||||||||    
T  17935 attttttagattcattcatttaatgatgtatgtggttcataatatagaccatatat 17880  T

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Target: scaffold0149 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 24714 - 24670
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaaga 224  Q
    |||||||||||||||||||||||||||| | || |||||||||||    
T  24714 ttttagattcattcattaaatgatgtatgtggtctataataaaga 24670  T

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Target: scaffold0036 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 260
Target Start/End: Original strand, 89630 - 89710
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaataaatcttaaatgta 260  Q
    |||||||||| ||||||||||||||||| |  | ||||||||||| |||||| |||||| |  |||||||| | |||||||    
T  89630 ttttagattctttcattaaatgatgtatgtgatctataataaagatcatatacatcattaattgaataaatttaaaatgta 89710  T

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Target: scaffold0340 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 14142 - 14083
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||| |||||||| | |||||| ||| |||||||||||| |||||||||| ||||||    
T  14142 tttttaggttcattcaattaatgatctatgtagtttataatatagaccatatacatcatt 14083  T

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Target: scaffold0321 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 175 - 238
Target Start/End: Original strand, 1660 - 1723
Alignment:
Q  175 ttattttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    ||||||||||| |||||||||| |||||||||| | ||| |||||| |||||| ||| ||||||    
T  1660 ttattttttaggttcattcatttaatgatgtatgtggttcataatatagaccacatacatcatt 1723  T

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Target: scaffold1640 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1640
Description:

Target: scaffold1640; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 1169 - 1227
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    |||||||||||||||  ||||||||||| |||| |||||||||||| | ||| ||||||    
T  1169 ttttagattcattcaccaaatgatgtatgtagtctataataaagactacatagatcatt 1227  T

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Target: scaffold0029 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 15824 - 15890
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaat 246  Q
    |||||| |||||| || ||||||||||| |||| |||||||||||| | |||||| |||||| ||||    
T  15824 ttttaggttcatttatcaaatgatgtatgtagtctataataaagactacatatattatttaatgaat 15890  T

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Target: scaffold0029; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 246
Target Start/End: Original strand, 41283 - 41343
Alignment:
Q  186 attcattcattaaatgatgtatatagtttataataaagaccatatatatcatttaacgaat 246  Q
    |||||||||||||||||||||| |||| || ||||||||| | | | || |||||||||||    
T  41283 attcattcattaaatgatgtatgtagtctagaataaagactacacacattatttaacgaat 41343  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 238
Target Start/End: Original strand, 491879 - 491940
Alignment:
Q  177 attttttagattcattcattaaatgatgtatatagtttataataaagaccatatatatcatt 238  Q
    |||||||| ||||||||||| |||||||||| | ||| |||||| ||| |||||| ||||||    
T  491879 attttttaaattcattcatttaatgatgtatgtggttcataatatagatcatatacatcatt 491940  T

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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 139404 - 139360
Alignment:
Q  180 ttttagattcattcattaaatgatgtatatagtttataataaaga 224  Q
    ||||||||||||||||| |||||||||| | || |||||||||||    
T  139404 ttttagattcattcatttaatgatgtatgtggtctataataaaga 139360  T

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Target: scaffold0014 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 133168 - 133216
Alignment:
Q  179 tttttagattcattcattaaatgatgtatatagtttataataaagacca 227  Q
    |||||| ||||||||| ||||||||||| ||||| ||||||| ||||||    
T  133168 tttttatattcattcaataaatgatgtacatagtctataatatagacca 133216  T

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