View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21352_high_5 (Length: 428)
Name: NF21352_high_5
Description: NF21352
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21352_high_5 |
 |  |
|
Alignment Details
Target: chr2 (Bit Score: 290; Significance: 1e-162; HSPs: 13)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 99 - 412
Target Start/End: Complemental strand, 30384614 - 30384301
Alignment:
| Q |
99 |
ctggttttctgttgccaaagacatgtaacacttcctccctcgcacgtgtttgccaatcagggtacctactcaataatatcattgtccaaacaagcaaaac |
198 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30384614 |
ctggttttctgttgccaaagacatgtaacacttcctcccttgcacgggtttgccaatcagggtacctactcaataatatcattgtccaaacaagcaaaac |
30384515 |
T |
 |
| Q |
199 |
tgaagtagtcttttgacctgcaaagtggaacaacttgcattcctcgactacatcatcaagactcattcccacatccttgttgttttcattttcgtcaatt |
298 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30384514 |
cgaagtagtctcttgacctgcaaagtggaacaacttgcattcctcgactacatcatcaagactcattcccacatccttgttgttttcattttcgtcaatt |
30384415 |
T |
 |
| Q |
299 |
tccttgcgatttgactcaagaagaatgctcaataagtcattcctactgggctcacctgcctttaatgctttctccctcttgttaatcatatctttaagcg |
398 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
30384414 |
tccttgcgatttgactcaagaagaatgctcaataagtcattcctagtgggctcacctgcctttaatgctttttccctcttgttaatcatatctttaagcg |
30384315 |
T |
 |
| Q |
399 |
aagaggttatttct |
412 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
30384314 |
aagaggttatttct |
30384301 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 99 - 412
Target Start/End: Complemental strand, 30395048 - 30394735
Alignment:
| Q |
99 |
ctggttttctgttgccaaagacatgtaacacttcctccctcgcacgtgtttgccaatcagggtacctactcaataatatcattgtccaaacaagcaaaac |
198 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
30395048 |
ctggttttttgttgccaaagacatgtaacacttcctccctagcacgtgtttgccaatcagggtacctactcaacaatatcattgtccaaacaagcaaaac |
30394949 |
T |
 |
| Q |
199 |
tgaagtagtcttttgacctgcaaagtggaacaacttgcattcctcgactacatcatcaagactcattcccacatccttgttgttttcattttcgtcaatt |
298 |
Q |
| |
|
|||||||| | ||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||| ||| ||||| | || | |||||| |
|
|
| T |
30394948 |
cgaagtagtttcttgccctgcaaaatggaacaacttgcattcctcgactacatgatcaagactcattccaacactcttattgttgttgttattttcaatt |
30394849 |
T |
 |
| Q |
299 |
tccttgcgatttgactcaagaagaatgctcaataagtcattcctactgggctcacctgcctttaatgctttctccctcttgttaatcatatctttaagcg |
398 |
Q |
| |
|
||||| ||||||| ||||||||||| ||||||||||||||| || ||| ||||| ||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
30394848 |
tccttatgatttgattcaagaagaatactcaataagtcattcttagtggattcaccagcctttaattctttctccctcttgttaatcatatctttaagcg |
30394749 |
T |
 |
| Q |
399 |
aagaggttatttct |
412 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
30394748 |
aagaggttatttct |
30394735 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 108 - 399
Target Start/End: Complemental strand, 30425012 - 30424721
Alignment:
| Q |
108 |
tgttgccaaagacatgtaacacttcctccctcgcacgtgtttgccaatcagggtacctactcaataatatcattgtccaaacaagcaaaactgaagtagt |
207 |
Q |
| |
|
|||||||||| || ||||| ||||| ||||| |||||| |||||||||||||||||||||||| || | ||||||||||||||||||||| ||||| || |
|
|
| T |
30425012 |
tgttgccaaaaacttgtaatacttcttcccttgcacgttcttgccaatcagggtacctactcaacaacaccattgtccaaacaagcaaaacagaagtggt |
30424913 |
T |
 |
| Q |
208 |
cttttgacctgcaaagtggaacaacttgcattcctcgactacatcatcaagactcattcccacatccttgttgttttcattttcgtcaatttccttgcga |
307 |
Q |
| |
|
|| ||| |||||||||| ||| | |||||||||||| | ||||||||||||||||||||| |||| ||| ||||| | | ||| || ||||| ||| || |
|
|
| T |
30424912 |
ctcttggcctgcaaagtagaagagcttgcattcctctattacatcatcaagactcattccaacattcttattgttgccgtgttcttccatttctttgtga |
30424813 |
T |
 |
| Q |
308 |
tttgactcaagaagaatgctcaataagtcattcctactgggctcacctgcctttaatgctttctccctcttgttaatcatatctttaagcga |
399 |
Q |
| |
|
|||||||| | ||| || | |||||||||| | || ||| ||||||||||||| |||| | || |||||||||||||||||| ||||||| |
|
|
| T |
30424812 |
tttgactctaaaagtatacctaataagtcatccttagtggcttcacctgcctttagtgctctttctctcttgttaatcatatctgtaagcga |
30424721 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 99 - 390
Target Start/End: Complemental strand, 30484043 - 30483752
Alignment:
| Q |
99 |
ctggttttctgttgccaaagacatgtaacacttcctccctcgcacgtgtttgccaatcagggtacctactcaataatatcattgtccaaacaagcaaaac |
198 |
Q |
| |
|
|||||| | |||||||||| || |||| ||||||||| || ||||||| |||||||| ||||| |||||||||||||| |||||||||||||||||||| |
|
|
| T |
30484043 |
ctggttgtttgttgccaaaaacttgtagcacttcctctcttgcacgtgcttgccaattagggtgcctactcaataatacaattgtccaaacaagcaaaac |
30483944 |
T |
 |
| Q |
199 |
tgaagtagtcttttgacctgcaaagtggaacaacttgcattcctcgactacatcatcaagactcattcccacatccttgttgttttcattttcgtcaatt |
298 |
Q |
| |
|
|||||| || | || ||||||| || ||| | ||||||||||| || ||||||||||||| ||||||| |||| ||| ||||| | || || | |||| |
|
|
| T |
30483943 |
tgaagtggtttcttcccctgcaaggtagaatagcttgcattccttgattacatcatcaagattcattccaacattcttattgttgttgttatctttaatt |
30483844 |
T |
 |
| Q |
299 |
tccttgcgatttgactcaagaagaatgctcaataagtcattcctactgggctcacctgcctttaatgctttctccctcttgttaatcatatc |
390 |
Q |
| |
|
|||||| ||||||||||||||||||| | |||||||||||| || ||| ||||||||||||| | || | || ||||||||||| ||||| |
|
|
| T |
30483843 |
tccttgtgatttgactcaagaagaatacctaataagtcattcttagtggcttcacctgcctttatttctctttctctcttgttaataatatc |
30483752 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 108 - 401
Target Start/End: Complemental strand, 30469111 - 30468818
Alignment:
| Q |
108 |
tgttgccaaagacatgtaacacttcctccctcgcacgtgtttgccaatcagggtacctactcaataatatcattgtccaaacaagcaaaactgaagtagt |
207 |
Q |
| |
|
||||||||||||| ||||| ||||| ||||| ||||| | ||||||||| ||||||||||||||||| | ||||||||||||||||||||| ||||| || |
|
|
| T |
30469111 |
tgttgccaaagacctgtaatacttcttcccttgcacgcgcttgccaatcggggtacctactcaataacaccattgtccaaacaagcaaaacagaagtggt |
30469012 |
T |
 |
| Q |
208 |
cttttgacctgcaaagtggaacaacttgcattcctcgactacatcatcaagactcattcccacatccttgttgttttcattttcgtcaatttccttgcga |
307 |
Q |
| |
|
|| ||| |||||||||| ||| | |||||||||||| | |||||||||||||||||||| |||||||| ||||| ||| ||| || ||||| ||| || |
|
|
| T |
30469011 |
ctcttggcctgcaaagtagaatagcttgcattcctctatcacatcatcaagactcattccgacatccttattgttgccatgttcttccatttctttgtga |
30468912 |
T |
 |
| Q |
308 |
tttgactcaagaagaatgctcaataagtcattcctactgggctcacctgcctttaatgctttctccctcttgttaatcatatctttaagcgaag |
401 |
Q |
| |
|
|||||||| | ||| || | || || |||| | || | | ||||||||||||| |||| | || || ||||||||||||||| ||||||||| |
|
|
| T |
30468911 |
tttgactctaaaagtatacctaacaaatcatccttagttgcttcacctgcctttagtgctctttctctgttgttaatcatatctgtaagcgaag |
30468818 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 108 - 401
Target Start/End: Complemental strand, 30437300 - 30437007
Alignment:
| Q |
108 |
tgttgccaaagacatgtaacacttcctccctcgcacgtgtttgccaatcagggtacctactcaataatatcattgtccaaacaagcaaaactgaagtagt |
207 |
Q |
| |
|
|||||||||| || ||||| ||||||||||| ||||||| |||||||||||||||||||||||| || | |||||||||||||||||||| ||||| || |
|
|
| T |
30437300 |
tgttgccaaatacttgtaatacttcctcccttgcacgtgcttgccaatcagggtacctactcaacaacactattgtccaaacaagcaaaacagaagttgt |
30437201 |
T |
 |
| Q |
208 |
cttttgacctgcaaagtggaacaacttgcattcctcgactacatcatcaagactcattcccacatccttgttgttttcattttcgtcaatttccttgcga |
307 |
Q |
| |
|
|| | ||||||||||| ||| | |||||||||||| | |||||| |||||||||||||| |||| ||| ||||| |||| ||| || ||||| ||| || |
|
|
| T |
30437200 |
ctctgcacctgcaaagtagaatagcttgcattcctctattacatcgtcaagactcattccaacattcttattgttgtcatgttcttccatttctttgtga |
30437101 |
T |
 |
| Q |
308 |
tttgactcaagaagaatgctcaataagtcattcctactgggctcacctgcctttaatgctttctccctcttgttaatcatatctttaagcgaag |
401 |
Q |
| |
|
|||||||| | ||| || | || || |||| | | | | ||||||||| ||| |||| |||| ||| |||||||||||||| ||||||||| |
|
|
| T |
30437100 |
tttgactctaaaagtatacctaacaaatcatcctttgttgcttcacctgccattagtgctctctctctcgtgttaatcatatctgtaagcgaag |
30437007 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 99 - 283
Target Start/End: Original strand, 8379565 - 8379749
Alignment:
| Q |
99 |
ctggttttctgttgccaaagacatgtaacacttcctccctcgcacgtgtttgccaatcagggtacctactcaataatatcattgtccaaacaagcaaaac |
198 |
Q |
| |
|
|||||||| |||||||||| | ||||| ||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||| | |
|
|
| T |
8379565 |
ctggttttttgttgccaaatatttgtaatacttcctccctagcacgttcttgccaatcagggtacctactcaacaatatcattgtccaaacaagcatagt |
8379664 |
T |
 |
| Q |
199 |
tgaagtagtcttttgacctgcaaagtggaacaacttgcattcctcgactacatcatcaagactcattcccacatccttgttgttt |
283 |
Q |
| |
|
|||||||| | ||| ||||| |||| ||| |||||||||||| | |||||||| |||||||||||||||| || |||||||||| |
|
|
| T |
8379665 |
tgaagtagattcttgccctgccaagtagaataacttgcattcccccactacatcttcaagactcattcccatattcttgttgttt |
8379749 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 30384677 - 30384781
Alignment:
| Q |
2 |
tatgagttgcattttcgtagaattttaatcaacagttgcatcttttgtccggaaatactaacactaatcttgtattcagtataagcctcaagacaaactg |
101 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
30384677 |
tatgagtttcattttcgtagaattttaatcaagagttgcatcttttgtccggaaattctaacactaatcttgtattcactataagcctcaagacaaactg |
30384776 |
T |
 |
| Q |
102 |
gtttt |
106 |
Q |
| |
|
||||| |
|
|
| T |
30384777 |
gtttt |
30384781 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 99 - 399
Target Start/End: Complemental strand, 30431054 - 30430754
Alignment:
| Q |
99 |
ctggttttctgttgccaaagacatgtaacacttcctccctcgcacgtgtttgccaatcagggtacctactcaataatatcattgtccaaacaagcaaaac |
198 |
Q |
| |
|
||||||| |||||||||| || ||||| ||||| ||||| |||||| ||||||||| || ||||||||||| || | ||||||||||||||||||||| |
|
|
| T |
30431054 |
ctggtttattgttgccaaatacttgtaatacttcttcccttgcacgttcttgccaatctggttacctactcaacaacaccattgtccaaacaagcaaaac |
30430955 |
T |
 |
| Q |
199 |
tgaagtagtcttttgacctgcaaagtggaacaacttgcattcctcgactacatcatcaagactcattcccacatccttgttgttttcattttcgtcaatt |
298 |
Q |
| |
|
||||| |||| ||| |||||||||| ||| | |||||||||||| | ||||||||||||||||||||| |||| ||| ||||| | | ||| || ||| |
|
|
| T |
30430954 |
agaagtggtctcttgtcctgcaaagtagaagagcttgcattcctctattacatcatcaagactcattccaacattcttattgttgccttgttcttccatt |
30430855 |
T |
 |
| Q |
299 |
tccttgcgatttgactcaagaagaatgctcaataagtcattcctactgggctcacctgcctttaatgctttctccctcttgttaatcatatctttaagcg |
398 |
Q |
| |
|
|| || |||||||||| | ||| || | |||||||||| | || | | | |||||| |||| |||| | || ||||||||||| |||||| |||||| |
|
|
| T |
30430854 |
tctttttgatttgactctaaaagtatacctaataagtcatccttagttgctttacctgcttttagtgctctttctctcttgttaattatatctgtaagcg |
30430755 |
T |
 |
| Q |
399 |
a |
399 |
Q |
| |
|
| |
|
|
| T |
30430754 |
a |
30430754 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 99 - 282
Target Start/End: Complemental strand, 30476082 - 30475899
Alignment:
| Q |
99 |
ctggttttctgttgccaaagacatgtaacacttcctccctcgcacgtgtttgccaatcagggtacctactcaataatatcattgtccaaacaagcaaaac |
198 |
Q |
| |
|
|||||||| | ||||| ||||| || || ||||||||||| ||||| | |||||||||||| ||||||||||| || ||||||| ||||||||||||||| |
|
|
| T |
30476082 |
ctggttttttattgccgaagacttgcaatacttcctcccttgcacgagcttgccaatcaggatacctactcaacaacatcattgcccaaacaagcaaaac |
30475983 |
T |
 |
| Q |
199 |
tgaagtagtcttttgacctgcaaagtggaacaacttgcattcctcgactacatcatcaagactcattcccacatccttgttgtt |
282 |
Q |
| |
|
||||| |||| ||| |||||||||| ||| | ||||||||| || | |||||| |||||||||||||| |||||||| ||||| |
|
|
| T |
30475982 |
agaagtggtctcttgccctgcaaagtagaatagcttgcattcttctattacatcgtcaagactcattccgacatccttattgtt |
30475899 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 148 - 389
Target Start/End: Complemental strand, 23768273 - 23768032
Alignment:
| Q |
148 |
ttgccaatcagggtacctactcaataatatcattgtccaaacaagcaaaactgaagtagtcttttgacctgcaaagtggaacaacttgcattcctcgact |
247 |
Q |
| |
|
||||||||| |||| ||||||||| || | ||| ||||||||||||||| |||||||||||| ||| ||||||| ||||| ||| |||||||| ||||| |
|
|
| T |
23768273 |
ttgccaatctgggtgcctactcaacaacaccatcgtccaaacaagcaaatctgaagtagtctcttgccctgcaatatggaataacatgcattccccgact |
23768174 |
T |
 |
| Q |
248 |
acatcatcaagactcattcccacatccttgttgttttcattttcgtcaatttccttgcgatttgactcaagaagaatgctcaataagtcattcctactgg |
347 |
Q |
| |
|
|| || |||||||||| ||||| || |||| |||| ||| ||| | |||||| ||| | || ||||| || || | | |||||||||||| | ||| |
|
|
| T |
23768173 |
acttcttcaagactcaatcccatattcttgaagtttccatgttctttaatttctttgtggttcgactctaggaggagacctaataagtcattctcagtgg |
23768074 |
T |
 |
| Q |
348 |
gctcacctgcctttaatgctttctccctcttgttaatcatat |
389 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| |||| |
|
|
| T |
23768073 |
cttcacctgcctttattgctttctccctcttgttaattatat |
23768032 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 128 - 389
Target Start/End: Original strand, 23783778 - 23784039
Alignment:
| Q |
128 |
acttcctccctcgcacgtgtttgccaatcagggtacctactcaataatatcattgtccaaacaagcaaaactgaagtagtcttttgacctgcaaagtgga |
227 |
Q |
| |
|
||||||| ||| |||||| |||||||||||||||||||||||| || | ||| ||||||||||||||| |||||||||||| ||| ||||||| |||| |
|
|
| T |
23783778 |
acttccttccttgcacgttcttgccaatcagggtacctactcaacaacaccatcgtccaaacaagcaaatctgaagtagtctcttgccctgcaacatgga |
23783877 |
T |
 |
| Q |
228 |
acaacttgcattcctcgactacatcatcaagactcattcccacatccttgttgttttcattttcgtcaatttccttgcgatttgactcaagaagaatgct |
327 |
Q |
| |
|
| ||| |||||||| ||||||| || |||||||||| ||||| || |||| |||| ||| ||| | |||||| || | || ||||| || || | | |
|
|
| T |
23783878 |
ataacctgcattccccgactacttcttcaagactcaatcccatattcttgacgtttccatgttctttaatttctctgtggttcgactctaggaggagacc |
23783977 |
T |
 |
| Q |
328 |
caataagtcattcctactgggctcacctgcctttaatgctttctccctcttgttaatcatat |
389 |
Q |
| |
|
|||||||||||| | ||| ||||||||||| | |||||| |||||||||||||| |||| |
|
|
| T |
23783978 |
taataagtcattctcagtggcttcacctgccttaattgctttttccctcttgttaattatat |
23784039 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 128 - 201
Target Start/End: Complemental strand, 30403983 - 30403910
Alignment:
| Q |
128 |
acttcctccctcgcacgtgtttgccaatcagggtacctactcaataatatcattgtccaaacaagcaaaactga |
201 |
Q |
| |
|
|||||||| || || |||| |||||||||||| || |||||||| |||||||||||||||||||||| |||||| |
|
|
| T |
30403983 |
acttcctctctagctcgtgcttgccaatcaggatatctactcaacaatatcattgtccaaacaagcagaactga |
30403910 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 101 - 402
Target Start/End: Original strand, 41627795 - 41628096
Alignment:
| Q |
101 |
ggttttctgttgccaaagacatgtaacacttcctccctcgcacgtgtttgccaatcagggtacctactcaataatatcattgtccaaacaagcaaaactg |
200 |
Q |
| |
|
|||||| |||||||||||| ||||| ||||||||||| || | || |||||| |||||||||||||||||||||| ||||||||||||||| ||| || |
|
|
| T |
41627795 |
ggttttttgttgccaaagatttgtaatacttcctcccttgcccttgcttgccactcagggtacctactcaataataccattgtccaaacaagtaaagttg |
41627894 |
T |
 |
| Q |
201 |
aagtagtcttttgacctgcaaagtggaacaacttgcattcctcgactacatcatcaagactcattcccacatccttgttgttttcattttcgtcaatttc |
300 |
Q |
| |
|
||||||||| ||| |||||||||| ||||||||||||||||| | |||||| |||| | |||||||||||| | ||||||| ||| ||| | |||||| |
|
|
| T |
41627895 |
aagtagtctcttgccctgcaaagtagaacaacttgcattcctgaattacatcttcaatattcattcccacattcacgttgtttccatgttctttaatttc |
41627994 |
T |
 |
| Q |
301 |
cttgcgatttgactcaagaagaatgctcaataagtcattcctactgggctcacctgcctttaatgctttctccctcttgttaatcatatctttaagcgaa |
400 |
Q |
| |
|
|||| | |||| ||| | |||||| | ||||| |||||| || | ||||| |||||||| |||| |||| ||||| |||||||| ||||| ||| |
|
|
| T |
41627995 |
cttgtggtttgtctctataagaatacctaataaatcattcttattttctccaccttcctttaatattttcacccttttgttgatcatatccttaagtgaa |
41628094 |
T |
 |
| Q |
401 |
ga |
402 |
Q |
| |
|
|| |
|
|
| T |
41628095 |
ga |
41628096 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 245
Target Start/End: Original strand, 15852326 - 15852443
Alignment:
| Q |
128 |
acttcctccctcgcacgtgtttgccaatcagggtacctactcaataatatcattgtccaaacaagcaaaactgaagtagtcttttgacctgcaaagtgga |
227 |
Q |
| |
|
||||||| ||| |||||| |||||| ||||| ||||| | ||||| | |||||||||||| |||||| |||||| |||| ||| ||||| |||| | |
|
|
| T |
15852326 |
acttcctgccttgcacgttcttgccattcaggatacctgcctaataacaccattgtccaaaccagcaaacttgaagtggtctcttgccctgccaagtaaa |
15852425 |
T |
 |
| Q |
228 |
acaacttgcattcctcga |
245 |
Q |
| |
|
|||| |||||||| |||| |
|
|
| T |
15852426 |
acaatttgcattcatcga |
15852443 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 128 - 196
Target Start/End: Original strand, 15859313 - 15859381
Alignment:
| Q |
128 |
acttcctccctcgcacgtgtttgccaatcagggtacctactcaataatatcattgtccaaacaagcaaa |
196 |
Q |
| |
|
||||||||||| ||||||| |||||| ||||| ||||| | ||||| | |||||||||||| |||||| |
|
|
| T |
15859313 |
acttcctcccttgcacgtgcttgccattcaggatacctgcctaataacaccattgtccaaaccagcaaa |
15859381 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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