View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21354_low_1 (Length: 426)

Name: NF21354_low_1
Description: NF21354
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21354_low_1
NF21354_low_1
[»] chr7 (13 HSPs)
chr7 (15-410)||(26217617-26218012)
chr7 (15-410)||(26229867-26230262)
chr7 (18-410)||(26237267-26237659)
chr7 (18-410)||(26256428-26256820)
chr7 (18-410)||(24016442-24016833)
chr7 (306-410)||(15443905-15444009)
chr7 (306-399)||(15508687-15508780)
chr7 (211-410)||(24002045-24002244)
chr7 (211-410)||(24010229-24010428)
chr7 (220-410)||(24035606-24035796)
chr7 (30-77)||(24391079-24391126)
chr7 (28-80)||(16846798-16846850)
chr7 (306-410)||(23993476-23993580)
[»] chr5 (2 HSPs)
chr5 (201-291)||(23086618-23086708)
chr5 (367-410)||(23086784-23086827)
[»] chr3 (2 HSPs)
chr3 (210-287)||(36339960-36340037)
chr3 (30-74)||(36339792-36339836)
[»] chr4 (4 HSPs)
chr4 (322-410)||(53774797-53774885)
chr4 (317-351)||(10464221-10464255)
chr4 (317-351)||(10475159-10475193)
chr4 (319-351)||(8443538-8443570)
[»] scaffold0707 (2 HSPs)
scaffold0707 (30-77)||(5055-5102)
scaffold0707 (219-291)||(5232-5304)
[»] chr6 (2 HSPs)
chr6 (30-77)||(33568661-33568708)
chr6 (219-291)||(33568838-33568910)
[»] chr1 (1 HSPs)
chr1 (235-401)||(17953695-17953861)


Alignment Details
Target: chr7 (Bit Score: 356; Significance: 0; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 15 - 410
Target Start/End: Original strand, 26217617 - 26218012
Alignment:
Q  15 gacaagtgaggtcaaagtttttagtttgggtggtaactgttggagaaatattcaaagttttccggtcattcctcttaatggattgaatcatagacatact 114  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26217617 gacaagtgaggtcaaagtttttagtttgggtggtaactcttggagaaatattcaaagttttccggtcattcctcttaatggattgaatcatagacatact 26217716  T
Q  115 tgtcttaacaatggtttgcatttgagtggcattgttaattggttggccggtctgaatgatttctattttgttcatgaataccgctatattactaatgttg 214  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||| | ||||||||||||| ||||||||||||||||    
T  26217717 tgtcttaacaatggtatgcatttgagtggcactgttaattggttggctggtctgaatgatttctattctattcatgaataccggtatattactaatgttg 26217816  T
Q  215 aggattttgtgattatttcgcttgatctttcaacggagacatacaagcagttgttgctgcctcaaggttttaatgagattacacctgttcggccagttct 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26217817 aggattttgtgattatttcgcttgatctttcaacggagacatacaagcagttgttgctgcctcaaggttttgatgagattacacctgttcggccagttct 26217916  T
Q  315 tatggttttgatggattgtctttgtttttcttatgatacaaaagacaatggttttgttttatggcagatgaaggagtatggagttcatgagtcttg 410  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  26217917 tatggttttgatggattgtcttagtttttcttatgatacaaaagacaatggttttgttttatggcagatgaaggagtatggagttcaagagtcttg 26218012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 340; E-Value: 0
Query Start/End: Original strand, 15 - 410
Target Start/End: Original strand, 26229867 - 26230262
Alignment:
Q  15 gacaagtgaggtcaaagtttttagtttgggtggtaactgttggagaaatattcaaagttttccggtcattcctcttaatggattgaatcatagacatact 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26229867 gacaagtgaggtcaaagtttttagtttgggtggtaactgttggagaaatattcaaagttttccggtcattcctcttaatggattgaatcatagacatact 26229966  T
Q  115 tgtcttaacaatggtttgcatttgagtggcattgttaattggttggccggtctgaatgatttctattttgttcatgaataccgctatattactaatgttg 214  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||| | ||||||||||||| ||||||||||||||||    
T  26229967 tgtcttaacaatggtatgcatttgagtggcactgttaattggttggctggtctgaatgatttctattctattcatgaataccggtatattactaatgttg 26230066  T
Q  215 aggattttgtgattatttcgcttgatctttcaacggagacatacaagcagttgttgctgcctcaaggttttaatgagattacacctgttcggccagttct 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| || ||||| ||||||||||    
T  26230067 aggattttgtgattatttcgcttgatctttcaacggagacatacaagcagttgttgctgcctcaaggctttgatgagatttcagctgtttggccagttct 26230166  T
Q  315 tatggttttgatggattgtctttgtttttcttatgatacaaaagacaatggttttgttttatggcagatgaaggagtatggagttcatgagtcttg 410  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  26230167 tatggttttgatggattgtcttagtttttcttatgatacaaaagacaatggttttgttttatggcagatgaaagagtatggagttcaagagtcttg 26230262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 18 - 410
Target Start/End: Original strand, 26237267 - 26237659
Alignment:
Q  18 aagtgaggtcaaagtttttagtttgggtggtaactgttggagaaatattcaaagttttccggtcattcctcttaatggattgaatcatagacatacttgt 117  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |   ||| ||  |||||||| |||     
T  26237267 aagtgaggtcaaagtttttagtttgggtgttaactgttggagaaatattcaaagttttccggtcgttcctcttattttgttggattttagacatatttgg 26237366  T
Q  118 cttaacaatggtttgcatttgagtggcattgttaattggttggccggtctgaatgatttctattttgttcatgaataccgctatattactaatgttgagg 217  Q
    |||||| ||||| || ||||| |||| | | ||||||||||||| | ||  || |||||| ||| | |  ||||||||||  | | |||| ||||||||     
T  26237367 cttaacgatggtatgtatttgggtgggactattaattggttggctgttcgcaaagatttccattctttatatgaataccgagacagtactcatgttgagc 26237466  T
Q  218 attttgtgattatttcgcttgatctttcaacggagacatacaagcagttgttgctgcctcaaggttttaatgagattacacctgttcggccagttcttat 317  Q
    | ||||||||| |||||||||||||||| ||  |||||||||| ||||||||| |||||||||||||| ||||| |  ||  | ||||||||||||||||    
T  26237467 aatttgtgattctttcgcttgatctttcgacaaagacatacaaacagttgttgttgcctcaaggttttgatgaggtgccatttattcggccagttcttat 26237566  T
Q  318 ggttttgatggattgtctttgtttttcttatgatacaaaagacaatggttttgttttatggcagatgaaggagtatggagttcatgagtcttg 410  Q
    |||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  26237567 ggttttgatttaatgtctttgtttttcttatgatacaaaagacaatggttttgttttatggcagatgaaagagtatggatttcatgagtcttg 26237659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 18 - 410
Target Start/End: Original strand, 26256428 - 26256820
Alignment:
Q  18 aagtgaggtcaaagtttttagtttgggtggtaactgttggagaaatattcaaagttttccggtcattcctcttaatggattgaatcatagacatacttgt 117  Q
    |||||||||||||||||||| ||| |||||||| ||||||||||| |||||||||||||| || |||||||||||| | ||| || || |  |||||| |    
T  26256428 aagtgaggtcaaagtttttattttaggtggtaattgttggagaaacattcaaagttttccagtgattcctcttaattggttggattatggtaatacttct 26256527  T
Q  118 cttaacaatggtttgcatttgagtggcattgttaattggttggccggtctgaatgatttctattttgttcatgaataccgctatattactaatgttgagg 217  Q
     |||| | |||| ||||||||||||||| | |||||||| ||||   ||  ||  ||||| ||     | ||  ||||   |||||| || ||||||||     
T  26256528 attaatagtggtgtgcatttgagtggcactattaattggctggctattcacaagtatttccatcaatattatatatacgagtatatttctcatgttgagc 26256627  T
Q  218 attttgtgattatttcgcttgatctttcaacggagacatacaagcagttgttgctgcctcaaggttttaatgagattacacctgttcggccagttcttat 317  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |  ||  ||||| |||||||||||     
T  26256628 aatttgtgattatttcgcttgatctttcaacggagacatacaagcagttgttgctgcctcaaggttttgatgaggtgccatttgttcagccagttcttaa 26256727  T
Q  318 ggttttgatggattgtctttgtttttcttatgatacaaaagacaatggttttgttttatggcagatgaaggagtatggagttcatgagtcttg 410  Q
    |||||||||||| || |||||||||||| ||||||| || || |||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  26256728 ggttttgatggaatgcctttgtttttctcatgataccaaggaaaatgattttgttttatggcagatgaaggagtatggagttcaagagtcttg 26256820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 18 - 410
Target Start/End: Original strand, 24016442 - 24016833
Alignment:
Q  18 aagtgaggtcaaagtttttagtttgggtggtaactgttggagaaatattcaaagttttccggtcattcctcttaatggattgaatcatagacatacttgt 117  Q
    ||||||||| || ||||| | ||| ||||||||| |||||| ||||||||||||||||||  | |||||||||||| | ||| || ||||  ||||| ||    
T  24016442 aagtgaggttaacgttttcaattttggtggtaacagttggaaaaatattcaaagttttccactgattcctcttaattggttggatgatagtaatactagt 24016541  T
Q  118 cttaacaatggtttgcatttgagtggcattgttaattggttggccggtctgaatgatttctattttgttcatgaataccgctatattactaatgttgagg 217  Q
    |||||||||||  ||||||| | ||||| |||||||||||| ||   ||   |  ||||||||| |  | || | ||    | |||||| |||||| |      
T  24016542 cttaacaatggaatgcatttaaatggcactgttaattggttagctattcacgagcatttctattctcattataagtatgagtctattaccaatgttaaac 24016641  T
Q  218 attttgtgattatttcgcttgatctttcaacggagacatacaagcagttgttgctgcctcaaggttttaatgagattacacctgttcggccagttcttat 317  Q
    | ||||||||| |||| ||||||||||| ||||||||||||||||||||  ||||| ||||||| ||| | ||| |  ||    ||| ||| |||||||     
T  24016642 aatttgtgattgtttctcttgatctttcgacggagacatacaagcagtttctgctg-ctcaaggatttgacgaggtgccatgctttcagccggttcttaa 24016740  T
Q  318 ggttttgatggattgtctttgtttttcttatgatacaaaagacaatggttttgttttatggcagatgaaggagtatggagttcatgagtcttg 410  Q
    ||||||||||||  |||| ||||||||| |||||   ||  | | ||  |||||||||||||||||||||||||||||  |||| ||||||||    
T  24016741 ggttttgatggaaagtctatgtttttctcatgatttcaagaaaagtgaatttgttttatggcagatgaaggagtatgggtttcaagagtcttg 24016833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 306 - 410
Target Start/End: Original strand, 15443905 - 15444009
Alignment:
Q  306 gccagttcttatggttttgatggattgtctttgtttttcttatgatacaaaagacaa-tggttttgttttatggcagatgaaggagtatggagttcatga 404  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||| |  || |||| ||| |||||||||||||| |||||||||||||||||| | ||    
T  15443905 gccagttcttagggttctgatggattgtctttgtttttcttatgattc-caatacaactggatttgttttatggcatatgaaggagtatggagttgaaga 15444003  T
Q  405 gtcttg 410  Q
    ||||||    
T  15444004 gtcttg 15444009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 306 - 399
Target Start/End: Original strand, 15508687 - 15508780
Alignment:
Q  306 gccagttcttatggttttgatggattgtctttgtttttcttatgatacaaaagacaatggttttgttttatggcagatgaaggagtatggagtt 399  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||| | ||  | | ||| |||||||| ||||| ||||||||||||||||||    
T  15508687 gccagttcttagggttctgatggattgtctttgtttttcttatgattccaataaaactggatttgttttttggcatatgaaggagtatggagtt 15508780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 211 - 410
Target Start/End: Original strand, 24002045 - 24002244
Alignment:
Q  211 gttgaggattttgtgattatttcgcttgatctttcaacggagacatacaagcagttgttgctgcctcaaggttttaatgagattacacctgttcggccag 310  Q
    |||||| | ||||||||| |||| ||||| |||||||||||  ||||||||||| ||  || |||||  |||||||||||| |  ||  | ||| |||||    
T  24002045 gttgagcaatttgtgattgtttcacttgacctttcaacggaatcatacaagcagatgcagcagcctccgggttttaatgaggtaccattttttcagccag 24002144  T
Q  311 ttcttatggttttgatggattgtctttgtttttcttatga-tacaaaagacaatggttttgttttatggcagatgaaggagtatggagttcatgagtctt 409  Q
    |||||| ||||||||||||  || ||||||||| | |||| | ||| ||| | ||  |||||||||||||| ||||||||||| |||||||| |||||||    
T  24002145 ttcttagggttttgatggacggtatttgtttttatcatgattccaagaga-actgaatttgttttatggcatatgaaggagtacggagttcaagagtctt 24002243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 211 - 410
Target Start/End: Original strand, 24010229 - 24010428
Alignment:
Q  211 gttgaggattttgtgattatttcgcttgatctttcaacggagacatacaagcagttgttgctgcctcaaggttttaatgagattacacctgttcggccag 310  Q
    |||||| | |||| |||| |||| ||||| |||||||||||  | ||||||||||||  ||||||||  |||||||||||| || ||  | ||| ||| |    
T  24010229 gttgagcaatttgcgattgtttcacttgacctttcaacggaatcctacaagcagttgcagctgcctccgggttttaatgaggttccattttttcagccgg 24010328  T
Q  311 ttcttatggttttgatggattgtctttgtttttcttatga-tacaaaagacaatggttttgttttatggcagatgaaggagtatggagttcatgagtctt 409  Q
    |||||| ||||||||||||  || ||||||||| | |||| | ||| ||| | ||  |||||||||||||| ||||||||||| || ||||| |||||||    
T  24010329 ttcttagggttttgatggacggtatttgtttttatcatgattccaagaga-actgaatttgttttatggcatatgaaggagtacggggttcaagagtctt 24010427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 220 - 410
Target Start/End: Original strand, 24035606 - 24035796
Alignment:
Q  220 tttgtgattatttcgcttgatctttcaacggagacatacaagcagttgttgctgcctcaaggttttaatgagattacacctgttcggccagttcttatgg 319  Q
    ||||||||| |||| |||||||||||||||||  |||||||| ||||| |||  |||| ||| ||||| |||||  ||  | ||| |||| |||||| ||    
T  24035606 tttgtgattgtttcacttgatctttcaacggaatcatacaagaagttgctgcctcctccagggtttaacgagatgccatgttttcagccacttcttaggg 24035705  T
Q  320 ttttgatggattgtctttgtttttcttatgatacaaaagacaatggttttgttttatggcagatgaaggagtatggagttcatgagtcttg 410  Q
    ||||||||||  |||||||||| ||| || || | ||  | | ||  || ||||||||||| ||||||||||| || ||||| ||||||||    
T  24035706 ttttgatggacagtctttgtttatctcataatcccaagaaaactgaattggttttatggcaaatgaaggagtacggcgttcaagagtcttg 24035796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 24391079 - 24391126
Alignment:
Q  30 agtttttagtttgggtggtaactgttggagaaatattcaaagttttcc 77  Q
    ||||||||||||||||| |||   ||||||||||||||||||||||||    
T  24391079 agtttttagtttgggtgataatatttggagaaatattcaaagttttcc 24391126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 16846850 - 16846798
Alignment:
Q  28 aaagtttttagtttgggtggtaactgttggagaaatattcaaagttttccggt 80  Q
    |||||||||||| |||| | |||   |||||||||||||||||||||||||||    
T  16846850 aaagtttttagtctgggcgataatgcttggagaaatattcaaagttttccggt 16846798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 306 - 410
Target Start/End: Original strand, 23993476 - 23993580
Alignment:
Q  306 gccagttcttatggttttgatggattgtctttgtttttcttatgatacaaaagacaatggttttgttttatggcagatgaaggagtatggagttcatgag 405  Q
    ||||||||||| ||||||||  ||  |||| ||||||||| | ||| | || || | ||  |||||||||||||| ||||||||||| || ||||| |||    
T  23993476 gccagttcttagggttttgagtgacagtctctgtttttctcacgattccaatgaaactgaatttgttttatggcatatgaaggagtacggggttcaagag 23993575  T
Q  406 tcttg 410  Q
    |||||    
T  23993576 tcttg 23993580  T

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Target: chr5 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 201 - 291
Target Start/End: Original strand, 23086618 - 23086708
Alignment:
Q  201 tattactaatgttgaggattttgtgattatttcgcttgatctttcaacggagacatacaagcagttgttgctgcctcaaggttttaatgag 291  Q
    ||||||||||| | || | ||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  23086618 tattactaatgctaagcagtttgtcattgtttcgcttgatctatcaacggagacatacaagcagttgttgctgcctcaaggttttgatgag 23086708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 410
Target Start/End: Original strand, 23086784 - 23086827
Alignment:
Q  367 tttgttttatggcagatgaaggagtatggagttcatgagtcttg 410  Q
    |||||| |||||||||||||||||| ||||||||| ||||||||    
T  23086784 tttgttatatggcagatgaaggagtttggagttcaagagtcttg 23086827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 210 - 287
Target Start/End: Original strand, 36339960 - 36340037
Alignment:
Q  210 tgttgaggattttgtgattatttcgcttgatctttcaacggagacatacaagcagttgttgctgcctcaaggttttaa 287  Q
    ||||||| | || |||||| |||||||||||||||| ||||||||||||| |||||| ||||| |||  |||||||||    
T  36339960 tgttgagcaattggtgattgtttcgcttgatctttcgacggagacatacaggcagtttttgcttcctgcaggttttaa 36340037  T

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Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 36339792 - 36339836
Alignment:
Q  30 agtttttagtttgggtggtaactgttggagaaatattcaaagttt 74  Q
    |||||||||||| |||| ||| ||||||||| |||||||||||||    
T  36339792 agtttttagttttggtgataattgttggagatatattcaaagttt 36339836  T

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Target: chr4 (Bit Score: 33; Significance: 0.000000002; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 322 - 410
Target Start/End: Original strand, 53774797 - 53774885
Alignment:
Q  322 ttgatggattgtctttgtttttcttatgatacaaaagacaatggttttgttttatggcagatgaaggagtatggagttcatgagtcttg 410  Q
    |||||||||||| |||||||||||||||||   ||||| | |  ||||||| ||||||| |||||||| | ||||||| | ||||||||    
T  53774797 ttgatggattgtatttgtttttcttatgattttaaagaaactcattttgttatatggcaaatgaaggaatttggagttgaagagtcttg 53774885  T

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Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 351
Target Start/End: Original strand, 10464221 - 10464255
Alignment:
Q  317 tggttttgatggattgtctttgtttttcttatgat 351  Q
    ||||||||||||||||||||||||||| |||||||    
T  10464221 tggttttgatggattgtctttgtttttgttatgat 10464255  T

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Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 351
Target Start/End: Original strand, 10475159 - 10475193
Alignment:
Q  317 tggttttgatggattgtctttgtttttcttatgat 351  Q
    ||||||||||||||||||||||||||| |||||||    
T  10475159 tggttttgatggattgtctttgtttttgttatgat 10475193  T

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Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 351
Target Start/End: Complemental strand, 8443570 - 8443538
Alignment:
Q  319 gttttgatggattgtctttgtttttcttatgat 351  Q
    ||||||||||| |||||||||||||||||||||    
T  8443570 gttttgatggactgtctttgtttttcttatgat 8443538  T

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Target: scaffold0707 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 5055 - 5102
Alignment:
Q  30 agtttttagtttgggtggtaactgttggagaaatattcaaagttttcc 77  Q
    |||||| |||||||||| ||  ||||||||||||||||||||||||||    
T  5055 agttttcagtttgggtgatagttgttggagaaatattcaaagttttcc 5102  T

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Target: scaffold0707; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 291
Target Start/End: Original strand, 5232 - 5304
Alignment:
Q  219 ttttgtgattatttcgcttgatctttcaacggagacatacaagcagttgttgctgcctcaaggttttaatgag 291  Q
    |||||||||| |||| |||||||||||  ||||||||||||  || || ||||| ||| | ||||||||||||    
T  5232 ttttgtgattgtttcccttgatctttcgccggagacatacacacaatttttgcttcctaagggttttaatgag 5304  T

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Target: chr6 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 33568661 - 33568708
Alignment:
Q  30 agtttttagtttgggtggtaactgttggagaaatattcaaagttttcc 77  Q
    |||||| |||||||||| ||  ||||||||||||||||||||||||||    
T  33568661 agttttcagtttgggtgatagttgttggagaaatattcaaagttttcc 33568708  T

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Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 291
Target Start/End: Original strand, 33568838 - 33568910
Alignment:
Q  219 ttttgtgattatttcgcttgatctttcaacggagacatacaagcagttgttgctgcctcaaggttttaatgag 291  Q
    |||||||||| |||| |||||||||||  ||||||||||||  || || ||||| ||| | ||||||||||||    
T  33568838 ttttgtgattgtttcccttgatctttcgccggagacatacacacaatttttgcttcctaagggttttaatgag 33568910  T

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Target: chr1 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 235 - 401
Target Start/End: Complemental strand, 17953861 - 17953695
Alignment:
Q  235 cttgatctttcaacggagacatacaagcagttgttgctgcctcaaggttttaatgagattacacctgttcg-gccagttcttatggttttgatggattgt 333  Q
    ||||||||||| || ||||||| |||| || |||| ||||||||||||||| ||||| |  ||  || | | |||||||||||  ||||||||||  ||     
T  17953861 cttgatctttcgacagagacattcaagaagctgttactgcctcaaggttttgatgaggtgcca-ttgatagagccagttcttagtgttttgatgggctgc 17953763  T
Q  334 ctttgtttttcttatgatacaaaagacaatggttttgttttatggcagatgaaggagtatggagttca 401  Q
    ||||||||||| ||||||   | | | | ||  |||||||||||||||||||| |||||||| |||||    
T  17953762 ctttgtttttcgtatgatttcagaaaaactgaatttgttttatggcagatgaaagagtatggggttca 17953695  T

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