View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21356_low_15 (Length: 300)

Name: NF21356_low_15
Description: NF21356
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21356_low_15
NF21356_low_15
[»] chr4 (43 HSPs)
chr4 (67-261)||(29808110-29808311)
chr4 (1-109)||(47997892-47998000)
chr4 (188-288)||(46767279-46767379)
chr4 (173-288)||(4670392-4670507)
chr4 (69-120)||(14542750-14542801)
chr4 (69-109)||(49308840-49308880)
chr4 (70-109)||(47806257-47806296)
chr4 (68-107)||(56497611-56497650)
chr4 (74-120)||(3580739-3580785)
chr4 (74-119)||(9990291-9990336)
chr4 (75-120)||(11144655-11144700)
chr4 (75-120)||(19854591-19854636)
chr4 (68-109)||(24785463-24785504)
chr4 (68-109)||(24822762-24822803)
chr4 (75-120)||(34833996-34834041)
chr4 (75-120)||(39974528-39974573)
chr4 (68-109)||(49473664-49473705)
chr4 (68-120)||(7230299-7230351)
chr4 (67-119)||(7371539-7371591)
chr4 (75-107)||(10006366-10006398)
chr4 (75-107)||(12698623-12698655)
chr4 (73-120)||(54294412-54294459)
chr4 (74-120)||(1701634-1701680)
chr4 (75-109)||(3936653-3936687)
chr4 (75-109)||(6087773-6087807)
chr4 (75-109)||(24664992-24665026)
chr4 (68-118)||(30420861-30420911)
chr4 (75-109)||(32737736-32737770)
chr4 (75-109)||(37800857-37800891)
chr4 (75-109)||(44221473-44221507)
chr4 (68-106)||(46676502-46676540)
chr4 (75-109)||(52132303-52132337)
chr4 (68-109)||(1657031-1657072)
chr4 (68-109)||(11269713-11269754)
chr4 (68-109)||(19908711-19908752)
chr4 (75-120)||(20799384-20799429)
chr4 (75-120)||(50362129-50362174)
chr4 (75-119)||(281617-281661)
chr4 (69-109)||(6474459-6474499)
chr4 (68-120)||(11166705-11166757)
chr4 (77-109)||(17729454-17729486)
chr4 (67-103)||(18635548-18635584)
chr4 (68-100)||(49949353-49949385)
[»] chr8 (22 HSPs)
chr8 (170-288)||(34492606-34492724)
chr8 (68-109)||(30623312-30623353)
chr8 (75-120)||(38763505-38763550)
chr8 (68-120)||(1244695-1244747)
chr8 (75-120)||(9055395-9055440)
chr8 (68-120)||(19778084-19778136)
chr8 (74-110)||(36122548-36122584)
chr8 (84-119)||(11906537-11906572)
chr8 (75-113)||(8072754-8072792)
chr8 (67-105)||(19701349-19701387)
chr8 (68-110)||(27750904-27750946)
chr8 (75-109)||(39821910-39821944)
chr8 (75-120)||(498757-498802)
chr8 (67-120)||(16843513-16843566)
chr8 (75-120)||(21589191-21589236)
chr8 (75-120)||(23763277-23763322)
chr8 (75-107)||(7839121-7839153)
chr8 (68-104)||(8442493-8442529)
chr8 (68-120)||(17704032-17704084)
chr8 (68-120)||(19488319-19488371)
chr8 (76-120)||(30176409-30176453)
chr8 (68-120)||(42208459-42208511)
[»] chr1 (42 HSPs)
chr1 (68-120)||(10132434-10132486)
chr1 (75-120)||(44221013-44221058)
chr1 (68-120)||(6809789-6809841)
chr1 (68-120)||(9639807-9639859)
chr1 (68-120)||(17283970-17284022)
chr1 (77-110)||(5033571-5033604)
chr1 (67-108)||(30937493-30937534)
chr1 (67-108)||(42416821-42416862)
chr1 (77-109)||(5280659-5280691)
chr1 (73-109)||(10356715-10356751)
chr1 (68-120)||(19620595-19620647)
chr1 (69-109)||(29987113-29987153)
chr1 (68-120)||(34595891-34595943)
chr1 (68-120)||(38448856-38448908)
chr1 (68-108)||(45481512-45481552)
chr1 (74-109)||(3481586-3481621)
chr1 (68-107)||(40613042-40613081)
chr1 (75-109)||(11681249-11681283)
chr1 (75-109)||(21400024-21400058)
chr1 (68-110)||(24236618-24236660)
chr1 (75-109)||(29233975-29234009)
chr1 (75-109)||(29251780-29251814)
chr1 (75-109)||(32944762-32944796)
chr1 (75-109)||(41973281-41973315)
chr1 (75-120)||(4715548-4715593)
chr1 (68-109)||(9872106-9872147)
chr1 (76-109)||(11354019-11354052)
chr1 (75-104)||(16033456-16033485)
chr1 (75-120)||(21638139-21638184)
chr1 (75-120)||(26256079-26256124)
chr1 (68-109)||(28039861-28039902)
chr1 (75-108)||(29798118-29798151)
chr1 (75-120)||(34521180-34521225)
chr1 (75-120)||(34766886-34766931)
chr1 (75-108)||(38862128-38862161)
chr1 (76-104)||(7610175-7610203)
chr1 (75-107)||(16580802-16580834)
chr1 (69-109)||(22335378-22335418)
chr1 (75-107)||(34485903-34485935)
chr1 (68-120)||(35473971-35474023)
chr1 (75-107)||(39949838-39949870)
chr1 (68-120)||(47528437-47528489)
[»] chr5 (32 HSPs)
chr5 (170-285)||(18605115-18605230)
chr5 (75-120)||(31708136-31708181)
chr5 (72-120)||(42005128-42005176)
chr5 (76-110)||(17465395-17465429)
chr5 (67-120)||(23118041-23118094)
chr5 (75-108)||(25607060-25607093)
chr5 (75-120)||(37932356-37932401)
chr5 (68-109)||(42168946-42168987)
chr5 (75-119)||(13777788-13777832)
chr5 (68-120)||(43108588-43108640)
chr5 (68-119)||(5846048-5846099)
chr5 (68-107)||(11647216-11647255)
chr5 (75-110)||(12611035-12611070)
chr5 (68-119)||(22498961-22499011)
chr5 (75-109)||(6489033-6489067)
chr5 (75-109)||(6624802-6624836)
chr5 (69-103)||(26590727-26590761)
chr5 (75-109)||(37614341-37614375)
chr5 (75-109)||(37791078-37791112)
chr5 (75-120)||(5485212-5485257)
chr5 (67-108)||(8544991-8545032)
chr5 (71-120)||(18872689-18872738)
chr5 (76-109)||(24408522-24408555)
chr5 (75-120)||(27721665-27721710)
chr5 (75-120)||(33014234-33014279)
chr5 (67-104)||(40446001-40446038)
chr5 (75-107)||(7215776-7215808)
chr5 (75-107)||(11017202-11017234)
chr5 (75-107)||(32339761-32339793)
chr5 (75-107)||(32675296-32675328)
chr5 (68-120)||(34702509-34702561)
chr5 (75-107)||(42708001-42708033)
[»] scaffold0041 (1 HSPs)
scaffold0041 (226-288)||(83903-83965)
[»] chr7 (41 HSPs)
chr7 (226-288)||(40882318-40882380)
chr7 (66-120)||(6384868-6384922)
chr7 (68-120)||(7872738-7872790)
chr7 (68-108)||(26009295-26009335)
chr7 (68-104)||(37230034-37230070)
chr7 (68-120)||(46987105-46987157)
chr7 (66-119)||(6768698-6768751)
chr7 (68-109)||(21050223-21050264)
chr7 (75-120)||(22690026-22690071)
chr7 (68-107)||(2618698-2618737)
chr7 (75-106)||(37864451-37864482)
chr7 (75-109)||(2916128-2916162)
chr7 (75-109)||(9522938-9522972)
chr7 (75-117)||(29237550-29237592)
chr7 (75-113)||(31281762-31281800)
chr7 (75-104)||(5041365-5041394)
chr7 (75-120)||(5458061-5458106)
chr7 (75-120)||(16537526-16537571)
chr7 (79-120)||(16577850-16577891)
chr7 (79-120)||(16587771-16587812)
chr7 (75-120)||(16628091-16628136)
chr7 (68-109)||(18714467-18714508)
chr7 (79-120)||(23069847-23069888)
chr7 (75-120)||(27772223-27772268)
chr7 (75-108)||(31292771-31292804)
chr7 (75-116)||(38553844-38553885)
chr7 (67-116)||(43998593-43998642)
chr7 (75-120)||(47155094-47155139)
chr7 (75-120)||(48007537-48007582)
chr7 (76-108)||(394362-394394)
chr7 (75-107)||(1046582-1046614)
chr7 (77-109)||(5579721-5579753)
chr7 (67-107)||(14671188-14671228)
chr7 (69-109)||(19793541-19793581)
chr7 (67-107)||(22777363-22777402)
chr7 (68-104)||(30296352-30296388)
chr7 (75-107)||(37624569-37624601)
chr7 (68-108)||(40762209-40762249)
chr7 (67-107)||(42336088-42336128)
chr7 (79-107)||(45979143-45979171)
chr7 (67-107)||(48527208-48527248)
[»] chr3 (47 HSPs)
chr3 (68-120)||(25902799-25902851)
chr3 (68-120)||(1149059-1149111)
chr3 (204-263)||(48601333-48601392)
chr3 (67-120)||(4216390-4216442)
chr3 (68-109)||(25505702-25505743)
chr3 (68-109)||(35191818-35191859)
chr3 (75-120)||(53207996-53208041)
chr3 (68-119)||(10594696-10594747)
chr3 (68-119)||(14741813-14741864)
chr3 (75-109)||(13829078-13829112)
chr3 (67-109)||(45096044-45096086)
chr3 (68-109)||(21914072-21914113)
chr3 (68-109)||(54230100-54230141)
chr3 (68-120)||(28130924-28130976)
chr3 (74-110)||(35347295-35347331)
chr3 (68-120)||(35863803-35863855)
chr3 (75-107)||(53996325-53996357)
chr3 (69-120)||(14149536-14149587)
chr3 (68-107)||(17588381-17588420)
chr3 (68-107)||(21513307-21513346)
chr3 (74-109)||(25730427-25730462)
chr3 (68-119)||(30200845-30200896)
chr3 (215-289)||(49131725-49131797)
chr3 (82-120)||(10617587-10617625)
chr3 (68-110)||(21245812-21245854)
chr3 (75-109)||(25441501-25441535)
chr3 (75-117)||(31797251-31797292)
chr3 (75-120)||(2153491-2153536)
chr3 (75-120)||(2453839-2453884)
chr3 (75-120)||(5702169-5702213)
chr3 (75-104)||(8238590-8238619)
chr3 (75-120)||(14771357-14771402)
chr3 (75-108)||(19939043-19939076)
chr3 (68-105)||(28266735-28266772)
chr3 (75-108)||(42074129-42074162)
chr3 (75-120)||(45431974-45432019)
chr3 (75-104)||(49975811-49975840)
chr3 (68-109)||(52119395-52119436)
chr3 (76-108)||(1743928-1743960)
chr3 (77-109)||(6835852-6835884)
chr3 (75-107)||(7938750-7938782)
chr3 (75-107)||(8139741-8139773)
chr3 (75-107)||(12976605-12976637)
chr3 (68-120)||(20671833-20671885)
chr3 (75-107)||(39408267-39408299)
chr3 (68-104)||(48315030-48315066)
chr3 (75-107)||(52575973-52576005)
[»] scaffold0127 (1 HSPs)
scaffold0127 (215-287)||(14591-14663)
[»] chr2 (47 HSPs)
chr2 (68-120)||(2264816-2264868)
chr2 (68-120)||(35685051-35685103)
chr2 (75-120)||(27152379-27152424)
chr2 (68-120)||(24393264-24393316)
chr2 (68-120)||(24593395-24593447)
chr2 (75-109)||(2256997-2257031)
chr2 (68-110)||(12124564-12124606)
chr2 (67-120)||(5980245-5980298)
chr2 (68-109)||(15654870-15654911)
chr2 (75-120)||(36359340-36359385)
chr2 (75-107)||(6579284-6579316)
chr2 (67-103)||(16204824-16204860)
chr2 (68-120)||(18910523-18910575)
chr2 (68-120)||(24548030-24548082)
chr2 (68-120)||(32091161-32091213)
chr2 (68-120)||(34903536-34903588)
chr2 (75-106)||(18782544-18782575)
chr2 (75-110)||(41526776-41526811)
chr2 (67-109)||(9389486-9389528)
chr2 (67-109)||(11810383-11810425)
chr2 (68-110)||(12124703-12124745)
chr2 (67-109)||(12413511-12413553)
chr2 (67-109)||(12425571-12425613)
chr2 (79-109)||(12599866-12599896)
chr2 (75-109)||(23407019-23407053)
chr2 (75-109)||(24592847-24592881)
chr2 (75-109)||(25274830-25274864)
chr2 (80-109)||(2939784-2939813)
chr2 (75-120)||(3503000-3503045)
chr2 (68-105)||(6141239-6141276)
chr2 (75-120)||(18611953-18611998)
chr2 (75-108)||(35727463-35727496)
chr2 (75-120)||(37320507-37320552)
chr2 (67-100)||(39761456-39761489)
chr2 (68-109)||(43117191-43117232)
chr2 (75-103)||(833076-833104)
chr2 (68-120)||(4056809-4056861)
chr2 (75-103)||(4122020-4122048)
chr2 (68-108)||(5137807-5137847)
chr2 (68-120)||(10065492-10065544)
chr2 (75-107)||(12619370-12619402)
chr2 (68-120)||(18231463-18231515)
chr2 (68-120)||(18324884-18324936)
chr2 (75-107)||(20455917-20455949)
chr2 (75-107)||(21258642-21258674)
chr2 (77-109)||(27411120-27411152)
chr2 (68-120)||(28771601-28771653)
[»] chr6 (24 HSPs)
chr6 (75-120)||(28592677-28592722)
chr6 (69-120)||(9333970-9334021)
chr6 (75-109)||(12808895-12808929)
chr6 (75-119)||(30639417-30639461)
chr6 (67-119)||(33824899-33824951)
chr6 (75-109)||(655750-655784)
chr6 (75-109)||(2726418-2726452)
chr6 (75-109)||(9111073-9111107)
chr6 (75-109)||(9977083-9977117)
chr6 (75-109)||(15155761-15155795)
chr6 (75-109)||(20744164-20744198)
chr6 (75-104)||(334166-334195)
chr6 (75-120)||(4450288-4450333)
chr6 (75-120)||(7273077-7273122)
chr6 (67-120)||(9923258-9923311)
chr6 (79-120)||(17151266-17151307)
chr6 (68-120)||(4467297-4467349)
chr6 (76-104)||(10496977-10497005)
chr6 (68-120)||(14515282-14515334)
chr6 (68-120)||(15291680-15291732)
chr6 (68-120)||(17177936-17177988)
chr6 (68-104)||(22414454-22414490)
chr6 (69-109)||(27907952-27907992)
chr6 (73-109)||(33930519-33930555)
[»] scaffold0734 (1 HSPs)
scaffold0734 (68-120)||(4331-4383)
[»] scaffold0044 (1 HSPs)
scaffold0044 (69-113)||(42331-42375)
[»] scaffold0026 (1 HSPs)
scaffold0026 (68-107)||(75344-75383)
[»] scaffold0011 (1 HSPs)
scaffold0011 (170-240)||(12631-12701)
[»] scaffold0262 (1 HSPs)
scaffold0262 (68-109)||(15931-15972)
[»] scaffold0238 (1 HSPs)
scaffold0238 (68-109)||(25408-25449)
[»] scaffold0118 (1 HSPs)
scaffold0118 (79-120)||(45442-45483)
[»] scaffold0066 (1 HSPs)
scaffold0066 (75-120)||(17530-17575)
[»] scaffold0016 (1 HSPs)
scaffold0016 (75-104)||(99063-99092)
[»] scaffold0008 (1 HSPs)
scaffold0008 (75-104)||(122917-122946)
[»] scaffold0126 (1 HSPs)
scaffold0126 (68-108)||(34890-34930)


Alignment Details
Target: chr4 (Bit Score: 121; Significance: 5e-62; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 67 - 261
Target Start/End: Complemental strand, 29808311 - 29808110
Alignment:
Q  67 ataaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccacnnnnnnnnnnt----ggtagcttcaacgtatattttattttatgtt 162  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||               |||||||||||||||||||||||||||| ||    
T  29808311 ataaggacaatgcataatatatgcaaggtatggggttcgaaccttggacaccacaaaaaaaaaaaaaaaggtagcttcaacgtatattttattttatatt 29808212  T
Q  163 ccctt---aagtttatttgtattgagggtgtaaaatatgggcttatccctctgagcttcatttgtacttgatttgtggttttaaccgttttgtcggttat 259  Q
    |||||   ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  29808211 ccctttccaagtttatttgtattgagggtgtaaaatatgggcttatccctctgagcttcgtttgtacttgatttgtggttttaaccgttttgtcggttat 29808112  T
Q  260 ac 261  Q
    ||    
T  29808111 ac 29808110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 47998000 - 47997892
Alignment:
Q  1 taaatataagaacattatggtatggaaagaaaacaaagaaatgttaccgcgaacttagttaagacaataaggaaaatgcataatatatgcaaggtctggg 100  Q
    ||||||||||||||||| ||||| | |||||||||||| |||||| |||||||||||| | || ||||||| | |||| || ||||||| ||||| ||||    
T  47998000 taaatataagaacattacggtattgcaagaaaacaaagtaatgttcccgcgaacttagctcagtcaataagaacaatgtatgatatatgtaaggtttggg 47997901  T
Q  101 gttcgaacc 109  Q
    |||||||||    
T  47997900 gttcgaacc 47997892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 288
Target Start/End: Complemental strand, 46767379 - 46767279
Alignment:
Q  188 tgtaaaatatgggcttatccctctgagcttcatttgtacttgatttgtggttttaaccgttttgtcggttataccgtctttttctattggaatttcatct 287  Q
    ||||||||||||||| || ||| ||||||   |||||| |||||||||||||||| ||||||| |||||||||||  |||| |||||| |||| ||||||    
T  46767379 tgtaaaatatgggctaattcctttgagctctctttgtatttgatttgtggttttagccgttttatcggttataccacctttatctattagaatctcatct 46767280  T
Q  288 c 288  Q
    |    
T  46767279 c 46767279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 288
Target Start/End: Original strand, 4670392 - 4670507
Alignment:
Q  173 tatttgtattgagggtgtaaaatatgggcttatccctctgagcttcatttgtacttgatttgtggttttaaccgttttgtcggttataccgtctttttct 272  Q
    |||||||| ||||||||||| ||  ||||| ||||| |  || ||| ||| || |||||||||||||||| ||||||| | |||||||||| |||| | |    
T  4670392 tatttgtaatgagggtgtaatattagggctaatcccccatagtttcgtttatatttgatttgtggttttagccgttttattggttataccgcctttatat 4670491  T
Q  273 attggaatttcatctc 288  Q
    |||||||| |||||||    
T  4670492 attggaatctcatctc 4670507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 120
Target Start/End: Complemental strand, 14542801 - 14542750
Alignment:
Q  69 aaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    ||||| ||||||||||||||||||||||||||||||||||| || |||||||    
T  14542801 aaggacaatgcataatatatgcaaggtctggggttcgaaccctgaacaccac 14542750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 69 - 109
Target Start/End: Original strand, 49308840 - 49308880
Alignment:
Q  69 aaggaaaatgcataatatatgcaaggtctggggttcgaacc 109  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  49308840 aaggacaatgcataatatatgcaaggtctggggttcgaacc 49308880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 109
Target Start/End: Complemental strand, 47806296 - 47806257
Alignment:
Q  70 aggaaaatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  47806296 aggacaatgcataatatatgcaaggtctggggttcgaacc 47806257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 107
Target Start/End: Complemental strand, 56497650 - 56497611
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaa 107  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  56497650 taaggacaatgcataatatatgcaaggtctggggttcgaa 56497611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 3580739 - 3580785
Alignment:
Q  74 aaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    ||||||||||||||||||||||||||| ||||||||  |||||||||    
T  3580739 aaatgcataatatatgcaaggtctgggattcgaaccccggacaccac 3580785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 9990291 - 9990336
Alignment:
Q  74 aaatgcataatatatgcaaggtctggggttcgaaccttggacacca 119  Q
    |||||||||||||||||||| |||| ||||||||||| ||||||||    
T  9990291 aaatgcataatatatgcaagatctgaggttcgaacctcggacacca 9990336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 11144700 - 11144655
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    ||||||||||||||||||||||||||||| |||||  |||||||||    
T  11144700 aatgcataatatatgcaaggtctggggtttgaaccccggacaccac 11144655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 19854591 - 19854636
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    ||||||||||||||||||| || ||||||||||||| |||||||||    
T  19854591 aatgcataatatatgcaagatccggggttcgaacctcggacaccac 19854636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 109
Target Start/End: Complemental strand, 24785504 - 24785463
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||| |||||||||||||| ||||||||||||||||||||    
T  24785504 taaggacaatgcataatatatacaaggtctggggttcgaacc 24785463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 109
Target Start/End: Original strand, 24822762 - 24822803
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||| |||||||||||||| ||||||||||||||||||||    
T  24822762 taaggacaatgcataatatatacaaggtctggggttcgaacc 24822803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 34834041 - 34833996
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||||||||||||||||||| |||||||||||  ||||||||||    
T  34834041 aatgcataatatatgcaaggtccggggttcgaacactggacaccac 34833996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 39974528 - 39974573
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    ||||||||||||||| |||||||||||||| ||||| |||||||||    
T  39974528 aatgcataatatatggaaggtctggggttcaaacctcggacaccac 39974573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 109
Target Start/End: Original strand, 49473664 - 49473705
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||| |||||||||||||||||||||| ||||||||||||    
T  49473664 taaggacaatgcataatatatgcaaggtccggggttcgaacc 49473705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 7230299 - 7230351
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||| |||||||||||||||||||||| ||||||| ||||| || ||||||    
T  7230299 taaggacaatgcataatatatgcaaggtccggggttcaaacctcggccaccac 7230351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 7371591 - 7371539
Alignment:
Q  67 ataaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacacca 119  Q
    ||||||| ||| |||||||||||||||||| ||||||||||||  ||||||||    
T  7371591 ataaggacaatacataatatatgcaaggtccggggttcgaaccccggacacca 7371539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 107
Target Start/End: Original strand, 10006366 - 10006398
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaa 107  Q
    |||||||||||||||||||||||||||||||||    
T  10006366 aatgcataatatatgcaaggtctggggttcgaa 10006398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 107
Target Start/End: Original strand, 12698623 - 12698655
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaa 107  Q
    |||||||||||||||||||||||||||||||||    
T  12698623 aatgcataatatatgcaaggtctggggttcgaa 12698655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 120
Target Start/End: Complemental strand, 54294459 - 54294412
Alignment:
Q  73 aaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||||||||||||||||||||| ||||||| ||||  |||||||||    
T  54294459 aaaatgcataatatatgcaaggtccggggttcaaaccccggacaccac 54294412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 1701634 - 1701680
Alignment:
Q  74 aaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    ||||||||||||||||||||||| | |||||||||||  ||||||||    
T  1701634 aaatgcataatatatgcaaggtccgaggttcgaacctcagacaccac 1701680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 109
Target Start/End: Original strand, 3936653 - 3936687
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||||||||||||||||||| ||||||||||||    
T  3936653 aatgcataatatatgcaaggtccggggttcgaacc 3936687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 109
Target Start/End: Original strand, 6087773 - 6087807
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||||||||||||||||||||||||||| ||||    
T  6087773 aatgcataatatatgcaaggtctggggttcaaacc 6087807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 109
Target Start/End: Complemental strand, 24665026 - 24664992
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||||||||||||||||||| ||||||||||||    
T  24665026 aatgcataatatatgcaaggtccggggttcgaacc 24664992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 118
Target Start/End: Original strand, 30420861 - 30420911
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacacc 118  Q
    |||||| |||| |||||||||| ||||||| ||||||||||| ||||||||    
T  30420861 taaggacaatgtataatatatgtaaggtctagggttcgaaccctggacacc 30420911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 109
Target Start/End: Complemental strand, 32737770 - 32737736
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||| ||||||||||||||||||||||||||||||    
T  32737770 aatgtataatatatgcaaggtctggggttcgaacc 32737736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 109
Target Start/End: Original strand, 37800857 - 37800891
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||||||||||||| ||||||||||||||||||    
T  37800857 aatgcataatatatgcgaggtctggggttcgaacc 37800891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 109
Target Start/End: Original strand, 44221473 - 44221507
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||||||||||||||||||||| ||||||||||    
T  44221473 aatgcataatatatgcaaggtctgaggttcgaacc 44221507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 106
Target Start/End: Complemental strand, 46676540 - 46676502
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcga 106  Q
    |||||| |||||||||||||||||||||| |||||||||    
T  46676540 taaggacaatgcataatatatgcaaggtccggggttcga 46676502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 109
Target Start/End: Complemental strand, 52132337 - 52132303
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||||||||||||||||||||| ||||||||||    
T  52132337 aatgcataatatatgcaaggtctgtggttcgaacc 52132303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 109
Target Start/End: Complemental strand, 1657072 - 1657031
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||| ||||||||||||||| ||||| |||||||||||||    
T  1657072 taaggacaatgcataatatatgtaaggtttggggttcgaacc 1657031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 109
Target Start/End: Original strand, 11269713 - 11269754
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||| ||| ||||||||||||||||||| |||||||||||    
T  11269713 taaggacaatacataatatatgcaaggtcttgggttcgaacc 11269754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 109
Target Start/End: Original strand, 19908711 - 19908752
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||| |||||||||||||||||||||| | ||||||||||    
T  19908711 taaggacaatgcataatatatgcaaggtccgaggttcgaacc 19908752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 20799429 - 20799384
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||||||||||||||||||| ||||||| |||| ||| ||||||    
T  20799429 aatgcataatatatgcaaggtccggggttcaaaccctggtcaccac 20799384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 50362174 - 50362129
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    ||||||||||||||||||||||  |||||| |||||||| ||||||    
T  50362174 aatgcataatatatgcaaggtccagggttcaaaccttggccaccac 50362129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 119
Target Start/End: Original strand, 281617 - 281661
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacacca 119  Q
    ||||||||||||||| |||||| ||||||| ||||| ||||||||    
T  281617 aatgcataatatatgaaaggtccggggttcaaacctcggacacca 281661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 109
Target Start/End: Original strand, 6474459 - 6474499
Alignment:
Q  69 aaggaaaatgcataatatatgcaaggtctggggttcgaacc 109  Q
    ||||| ||||||| ||||| |||||||||||||||||||||    
T  6474459 aaggacaatgcatcatataagcaaggtctggggttcgaacc 6474499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 11166705 - 11166757
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||| |||| ||||||||||||||||||  ||||||||||  |||||||||    
T  11166705 taaggacaatgtataatatatgcaaggtctaaggttcgaaccccggacaccac 11166757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 17729454 - 17729486
Alignment:
Q  77 tgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||||||||||||||||||||||||| ||||    
T  17729454 tgcataatatatgcaaggtctggggttcaaacc 17729486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 18635548 - 18635584
Alignment:
Q  67 ataaggaaaatgcataatatatgcaaggtctggggtt 103  Q
    ||||||| |||||||||||||| ||||||||||||||    
T  18635548 ataaggacaatgcataatatatacaaggtctggggtt 18635584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 100
Target Start/End: Original strand, 49949353 - 49949385
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggg 100  Q
    |||||| ||||||||||||||||||||||||||    
T  49949353 taaggacaatgcataatatatgcaaggtctggg 49949385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 170 - 288
Target Start/End: Complemental strand, 34492724 - 34492606
Alignment:
Q  170 gtttatttgtattgagggtgtaaaatatgggcttatccctctgagcttcatttgtacttgatttgtggttttaaccgttttgtcggttataccgtctttt 269  Q
    |||||||||||||||||||||||||||| |||| |||||||  | |||||||||| |||  |||||||||||||| |||||||  ||||||||  |||||    
T  34492724 gtttatttgtattgagggtgtaaaatataggctaatccctcaaaacttcatttgttcttattttgtggttttaacagttttgtaagttataccacctttt 34492625  T
Q  270 tctattggaatttcatctc 288  Q
    ||||||||||| |||||||    
T  34492624 tctattggaatctcatctc 34492606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 109
Target Start/End: Original strand, 30623312 - 30623353
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  30623312 taaggacaatgcataatatatgcaaggtctggggttcgaacc 30623353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 38763550 - 38763505
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||    
T  38763550 aatgcataatatatgcaaggtctggggttcgaaccctggccaccac 38763505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 1244747 - 1244695
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||| |||||||||||||| ||||||||||||||||||||  |||||||||    
T  1244747 taaggacaatgcataatatatacaaggtctggggttcgaaccccggacaccac 1244695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 9055440 - 9055395
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||| |||||||||||||||||||||||| |||||| |||||||||    
T  9055440 aatgtataatatatgcaaggtctggggtttgaacctcggacaccac 9055395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 19778084 - 19778136
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||| |||||||||||||||||||||| |||||||||| | | ||||||||    
T  19778084 taaggacaatgcataatatatgcaaggtccggggttcgaatcctagacaccac 19778136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 36122548 - 36122584
Alignment:
Q  74 aaatgcataatatatgcaaggtctggggttcgaacct 110  Q
    |||||||||||||||||||||||| ||||||||||||    
T  36122548 aaatgcataatatatgcaaggtctagggttcgaacct 36122584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 119
Target Start/End: Original strand, 11906537 - 11906572
Alignment:
Q  84 tatatgcaaggtctggggttcgaaccttggacacca 119  Q
    ||||||||||||||||||||||||||| ||||||||    
T  11906537 tatatgcaaggtctggggttcgaacctcggacacca 11906572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 113
Target Start/End: Original strand, 8072754 - 8072792
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttgg 113  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  8072754 aatgcataatatatacaaggtccggggttcgaaccttgg 8072792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 105
Target Start/End: Complemental strand, 19701387 - 19701349
Alignment:
Q  67 ataaggaaaatgcataatatatgcaaggtctggggttcg 105  Q
    ||||||| ||||||||||||||| |||||||||||||||    
T  19701387 ataaggataatgcataatatatgtaaggtctggggttcg 19701349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 110
Target Start/End: Complemental strand, 27750946 - 27750904
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaacct 110  Q
    |||||| | |||||||||||||||||||| |||||||||||||    
T  27750946 taaggacagtgcataatatatgcaaggtccggggttcgaacct 27750904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 109
Target Start/End: Original strand, 39821910 - 39821944
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||||||||||||||||||||||||||| ||||    
T  39821910 aatgcataatatatgcaaggtctggggttcaaacc 39821944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 498757 - 498802
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||||||||||||||||||||| ||||  ||||| |||||||||    
T  498757 aatgcataatatatgcaaggtctgtggtttaaacctcggacaccac 498802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 16843566 - 16843513
Alignment:
Q  67 ataaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    ||||||| |||| ||||||||||||||||  | |||||||||| ||||||||||    
T  16843566 ataaggacaatgtataatatatgcaaggttcgtggttcgaaccctggacaccac 16843513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 21589236 - 21589191
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    ||||||||||||||| |||||| ||| ||| |||||||||||||||    
T  21589236 aatgcataatatatggaaggtccgggattcaaaccttggacaccac 21589191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 23763322 - 23763277
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    ||||||||||||||||||||||  ||||| ||||||| ||||||||    
T  23763322 aatgcataatatatgcaaggtccagggtttgaacctttgacaccac 23763277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 107
Target Start/End: Complemental strand, 7839153 - 7839121
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaa 107  Q
    ||||||||||||||||||||| |||||||||||    
T  7839153 aatgcataatatatgcaaggtatggggttcgaa 7839121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 8442529 - 8442493
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttc 104  Q
    |||||| |||||||||||||||||||||||| |||||    
T  8442529 taaggacaatgcataatatatgcaaggtctgaggttc 8442493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 17704032 - 17704084
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||| |||||||||||||||||||||||| | ||| ||||| || ||||||    
T  17704032 taaggacaatgcataatatatgcaaggtctgtgattcaaacctcggccaccac 17704084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 19488319 - 19488371
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||| |||||||||||||| |||||||||||| ||||| |  |||||||||    
T  19488319 taaggacaatgcataatatatacaaggtctggggctcgaatcccggacaccac 19488371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 30176453 - 30176409
Alignment:
Q  76 atgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    ||||||||||||||||||||| ||||||| ||||  |||||||||    
T  30176453 atgcataatatatgcaaggtccggggttcaaaccccggacaccac 30176409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 42208511 - 42208459
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||| |||||||||||||||||||||| | ||||| ||||| |||| ||||    
T  42208511 taaggacaatgcataatatatgcaaggtccgaggttcaaacctcggaccccac 42208459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 5e-19; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 10132486 - 10132434
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  10132486 taaggacaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 10132434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 44221013 - 44221058
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||    
T  44221013 aatgcacaatatatacaaggtctggggttcgaaccttggacaccac 44221058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 6809841 - 6809789
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||| |||||||||||||||||| |||||||||||||| ||||| ||||||    
T  6809841 taaggacaatgcataatatatgcaatgtctggggttcgaatcttggccaccac 6809789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 9639859 - 9639807
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||| |||||||||||||||||||||| || |||||||||| |||||||||    
T  9639859 taaggacaatgcataatatatgcaaggtccggagttcgaacctcggacaccac 9639807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 17283970 - 17284022
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||| ||||||||||||||||||||||  ||||||||||| ||||||||||    
T  17283970 taaggacaatgcataatatatgcaaggtccagggttcgaaccctggacaccac 17284022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 110
Target Start/End: Original strand, 5033571 - 5033604
Alignment:
Q  77 tgcataatatatgcaaggtctggggttcgaacct 110  Q
    ||||||||||||||||||||||||||||||||||    
T  5033571 tgcataatatatgcaaggtctggggttcgaacct 5033604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 30937493 - 30937534
Alignment:
Q  67 ataaggaaaatgcataatatatgcaaggtctggggttcgaac 108  Q
    ||||||| |||| |||||||||||||||||||||||||||||    
T  30937493 ataaggacaatgtataatatatgcaaggtctggggttcgaac 30937534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 42416821 - 42416862
Alignment:
Q  67 ataaggaaaatgcataatatatgcaaggtctggggttcgaac 108  Q
    ||||||| ||||||||||||||||||||| ||||||||||||    
T  42416821 ataaggataatgcataatatatgcaaggtttggggttcgaac 42416862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 5280659 - 5280691
Alignment:
Q  77 tgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||||||||||||||||||||||||||||||    
T  5280659 tgcataatatatgcaaggtctggggttcgaacc 5280691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 109
Target Start/End: Complemental strand, 10356751 - 10356715
Alignment:
Q  73 aaaatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||||||||||||||||||||||||||||| ||||    
T  10356751 aaaatgcataatatatgcaaggtctggggttcaaacc 10356715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 19620595 - 19620647
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||| ||| |||||||||||||||||| ||||||| || ||||||||||||    
T  19620595 taaggacaatacataatatatgcaaggtccggggttcaaatcttggacaccac 19620647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 109
Target Start/End: Complemental strand, 29987153 - 29987113
Alignment:
Q  69 aaggaaaatgcataatatatgcaaggtctggggttcgaacc 109  Q
    ||||| ||||||||||||||||||||||||| |||||||||    
T  29987153 aaggacaatgcataatatatgcaaggtctggagttcgaacc 29987113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 34595891 - 34595943
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||| |||||||||||||||||||||| ||||||| ||||| || ||||||    
T  34595891 taaggataatgcataatatatgcaaggtccggggttcaaacctcggccaccac 34595943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 38448908 - 38448856
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||| |||||||||||||||||||||| |||||||||| |  |||||||||    
T  38448908 taaggacaatgcataatatatgcaaggtccggggttcgaatcccggacaccac 38448856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 108
Target Start/End: Original strand, 45481512 - 45481552
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaac 108  Q
    |||||| |||||||||||||||||||||| |||||||||||    
T  45481512 taaggacaatgcataatatatgcaaggtccggggttcgaac 45481552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 74 - 109
Target Start/End: Original strand, 3481586 - 3481621
Alignment:
Q  74 aaatgcataatatatgcaaggtctggggttcgaacc 109  Q
    ||||||||||||||||||||||||||||||| ||||    
T  3481586 aaatgcataatatatgcaaggtctggggttcaaacc 3481621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 107
Target Start/End: Original strand, 40613042 - 40613081
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaa 107  Q
    |||||| |||||||||||||||||||||| ||||||||||    
T  40613042 taaggacaatgcataatatatgcaaggtccggggttcgaa 40613081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 109
Target Start/End: Original strand, 11681249 - 11681283
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||||||||||||||||||||||||||| ||||    
T  11681249 aatgcataatatatgcaaggtctggggttcaaacc 11681283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 109
Target Start/End: Complemental strand, 21400058 - 21400024
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaacc 109  Q
    ||||||||||||||||||||||| |||||||||||    
T  21400058 aatgcataatatatgcaaggtcttgggttcgaacc 21400024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 110
Target Start/End: Complemental strand, 24236660 - 24236618
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaacct 110  Q
    |||||| |||||||||||| | |||||||||||||||||||||    
T  24236660 taaggacaatgcataatatttacaaggtctggggttcgaacct 24236618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 109
Target Start/End: Complemental strand, 29234009 - 29233975
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaacc 109  Q
    ||||||||| |||||||||||||||||||||||||    
T  29234009 aatgcataaaatatgcaaggtctggggttcgaacc 29233975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 109
Target Start/End: Original strand, 29251780 - 29251814
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||||||||||||||||||||| ||||||||||    
T  29251780 aatgcataatatatgcaaggtctgaggttcgaacc 29251814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 109
Target Start/End: Original strand, 32944762 - 32944796
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||||||||||||||| ||||||||||||||||    
T  32944762 aatgcataatatatgcaacgtctggggttcgaacc 32944796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 109
Target Start/End: Original strand, 41973281 - 41973315
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||||||||||||||||||| ||||||||||||    
T  41973281 aatgcataatatatgcaaggtccggggttcgaacc 41973315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 4715593 - 4715548
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    ||||||||| ||||||||||| |||||||||||||| || ||||||    
T  4715593 aatgcataaaatatgcaaggtttggggttcgaacctcggccaccac 4715548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 109
Target Start/End: Complemental strand, 9872147 - 9872106
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||| ||||||||||||||||||||| || ||||||||||    
T  9872147 taaggataatgcataatatatgcaaggtttgcggttcgaacc 9872106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 11354052 - 11354019
Alignment:
Q  76 atgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||||||||||||||||||||||||| |||||    
T  11354052 atgcataatatatgcaaggtctggggtttgaacc 11354019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 104
Target Start/End: Complemental strand, 16033485 - 16033456
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttc 104  Q
    ||||||||||||||||||||||||||||||    
T  16033485 aatgcataatatatgcaaggtctggggttc 16033456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 21638139 - 21638184
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    ||||||| |||||||||||||| ||||||||||||  |||||||||    
T  21638139 aatgcatgatatatgcaaggtccggggttcgaaccccggacaccac 21638184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 26256124 - 26256079
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    ||||||||||||||||||| || |||||||||||| ||||| ||||    
T  26256124 aatgcataatatatgcaagatccggggttcgaaccctggactccac 26256079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 109
Target Start/End: Complemental strand, 28039902 - 28039861
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||| |||||||||||||||||||||||| |||| |||||    
T  28039902 taaggacaatgcataatatatgcaaggtctgaggtttgaacc 28039861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 108
Target Start/End: Complemental strand, 29798151 - 29798118
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaac 108  Q
    ||||||||||||||| ||||||||||||||||||    
T  29798151 aatgcataatatatgtaaggtctggggttcgaac 29798118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 34521225 - 34521180
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||||||||||||||||||| ||||||| ||||| || ||||||    
T  34521225 aatgcataatatatgcaaggtccggggttcaaacctcggccaccac 34521180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 34766886 - 34766931
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||| |||||| |||||||||||||||||||||||| || ||||||    
T  34766886 aatgtataatacatgcaaggtctggggttcgaacctcggccaccac 34766931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 108
Target Start/End: Original strand, 38862128 - 38862161
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaac 108  Q
    ||||||||| ||||||||||||||||||||||||    
T  38862128 aatgcataaaatatgcaaggtctggggttcgaac 38862161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 104
Target Start/End: Complemental strand, 7610203 - 7610175
Alignment:
Q  76 atgcataatatatgcaaggtctggggttc 104  Q
    |||||||||||||||||||||||||||||    
T  7610203 atgcataatatatgcaaggtctggggttc 7610175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 107
Target Start/End: Complemental strand, 16580834 - 16580802
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaa 107  Q
    |||| ||||||||||||||||||||||||||||    
T  16580834 aatgtataatatatgcaaggtctggggttcgaa 16580802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 109
Target Start/End: Original strand, 22335378 - 22335418
Alignment:
Q  69 aaggaaaatgcataatatatgcaaggtctggggttcgaacc 109  Q
    ||||| |||||||||||||||||||||||| ||||| ||||    
T  22335378 aaggacaatgcataatatatgcaaggtctgaggttcaaacc 22335418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 107
Target Start/End: Original strand, 34485903 - 34485935
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaa 107  Q
    ||||||||||||||| |||||||||||||||||    
T  34485903 aatgcataatatatgtaaggtctggggttcgaa 34485935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 35473971 - 35474023
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||| |||||||||||||||||||||   |||||||||||  |||||||||    
T  35473971 taaggataatgcataatatatgcaaggttcagggttcgaaccccggacaccac 35474023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 107
Target Start/End: Original strand, 39949838 - 39949870
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaa 107  Q
    |||||||||||||| ||||||||||||||||||    
T  39949838 aatgcataatatatacaaggtctggggttcgaa 39949870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 47528489 - 47528437
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||| ||||||||||||| |||||||| | ||||||||||  |||||||||    
T  47528489 taaggacaatgcataatatacgcaaggtccgaggttcgaaccccggacaccac 47528437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 285
Target Start/End: Complemental strand, 18605230 - 18605115
Alignment:
Q  170 gtttatttgtattgagggtgtaaaatatgggcttatccctctgagcttcatttgtacttgatttgtggttttaaccgttttgtcggttataccgtctttt 269  Q
    ||||||||||||||| ||||||||| ||||||| |||||| ||||||   |||||||||||||||||||||||| || |  ||||||| ||| | ||||     
T  18605230 gtttatttgtattgaaggtgtaaaacatgggctaatccctttgagctctttttgtacttgatttgtggttttaagcgatacgtcggttgtactgccttta 18605131  T
Q  270 tctattggaatttcat 285  Q
    | || |||||||||||    
T  18605130 tttaatggaatttcat 18605115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 31708181 - 31708136
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||||||||||||||||||||||||||||||||| |||||||||    
T  31708181 aatgcataatatatgcaaggtctggggttcgaacctcggacaccac 31708136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 72 - 120
Target Start/End: Original strand, 42005128 - 42005176
Alignment:
Q  72 gaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||||||||||||||||||||||||||||| ||| || |||||||||    
T  42005128 gaaaatgcataatatatgcaaggtctggggtttgaatctcggacaccac 42005176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 110
Target Start/End: Complemental strand, 17465429 - 17465395
Alignment:
Q  76 atgcataatatatgcaaggtctggggttcgaacct 110  Q
    |||||||||||||||||||||||||||||||||||    
T  17465429 atgcataatatatgcaaggtctggggttcgaacct 17465395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 23118094 - 23118041
Alignment:
Q  67 ataaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    ||||||| ||||||||||||||| ||||| ||||||||||||  ||||||||||    
T  23118094 ataaggacaatgcataatatatgtaaggtttggggttcgaactctggacaccac 23118041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 108
Target Start/End: Complemental strand, 25607093 - 25607060
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaac 108  Q
    ||||||||||||||||||||||||||||||||||    
T  25607093 aatgcataatatatgcaaggtctggggttcgaac 25607060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 37932356 - 37932401
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||||||||||||||||||| |||||||||||| ||| ||||||    
T  37932356 aatgcataatatatgcaaggtccggggttcgaaccctggccaccac 37932401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 109
Target Start/End: Complemental strand, 42168987 - 42168946
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||| |||||||| ||||||||||||||||||||||||||    
T  42168987 taaggacaatgcatagtatatgcaaggtctggggttcgaacc 42168946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 13777832 - 13777788
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacacca 119  Q
    ||||||| ||||||||||||||||||||| ||||| |||||||||    
T  13777832 aatgcatgatatatgcaaggtctggggtttgaaccctggacacca 13777788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 43108588 - 43108640
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||| |||||||||||||||||||||   ||||||||| ||||||||||||    
T  43108588 taaggacaatgcataatatatgcaaggttcagggttcgaatcttggacaccac 43108640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 119
Target Start/End: Original strand, 5846048 - 5846099
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacacca 119  Q
    |||||| |||||||||||||||||| ||||||||||| ||||  ||||||||    
T  5846048 taaggacaatgcataatatatgcaaagtctggggttcaaaccccggacacca 5846099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 107
Target Start/End: Original strand, 11647216 - 11647255
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaa 107  Q
    |||||| ||||||||||||||||||||| |||||||||||    
T  11647216 taaggacaatgcataatatatgcaaggtttggggttcgaa 11647255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 110
Target Start/End: Complemental strand, 12611070 - 12611035
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaacct 110  Q
    ||||||||| ||||||||||||||||||||||||||    
T  12611070 aatgcataaaatatgcaaggtctggggttcgaacct 12611035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 119
Target Start/End: Original strand, 22498961 - 22499011
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacacca 119  Q
    |||||| ||||||||||||||||||||||| |||||||||||  ||||||||    
T  22498961 taaggacaatgcataatatatgcaaggtct-gggttcgaaccccggacacca 22499011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 109
Target Start/End: Original strand, 6489033 - 6489067
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||||||||||||||||||||||||||| ||||    
T  6489033 aatgcataatatatgcaaggtctggggttcaaacc 6489067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 109
Target Start/End: Original strand, 6624802 - 6624836
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||||||||||||||||||| ||||||||||||    
T  6624802 aatgcataatatatgcaaggtccggggttcgaacc 6624836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 103
Target Start/End: Original strand, 26590727 - 26590761
Alignment:
Q  69 aaggaaaatgcataatatatgcaaggtctggggtt 103  Q
    ||||| |||||||||||||||||||||||||||||    
T  26590727 aaggacaatgcataatatatgcaaggtctggggtt 26590761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 109
Target Start/End: Complemental strand, 37614375 - 37614341
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||||||||||||||||||||||| ||||||||    
T  37614375 aatgcataatatatgcaaggtctgggattcgaacc 37614341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 109
Target Start/End: Complemental strand, 37791112 - 37791078
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||||||||||||||||||||||| ||||||||    
T  37791112 aatgcataatatatgcaaggtctgggattcgaacc 37791078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 5485212 - 5485257
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||||||||||||||| ||| ||||||| |||||||| ||||||    
T  5485212 aatgcataatatatgcaatgtccggggttctaaccttggccaccac 5485257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 8545032 - 8544991
Alignment:
Q  67 ataaggaaaatgcataatatatgcaaggtctggggttcgaac 108  Q
    ||||||| |||||||||||||||||||||| || ||||||||    
T  8545032 ataaggacaatgcataatatatgcaaggtccggagttcgaac 8544991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 120
Target Start/End: Original strand, 18872689 - 18872738
Alignment:
Q  71 ggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||||||||||||||||||||||  |||||||||| | ||| ||||||    
T  18872689 ggaaaatgcataatatatgcaaggttcggggttcgaatcctggtcaccac 18872738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 24408522 - 24408555
Alignment:
Q  76 atgcataatatatgcaaggtctggggttcgaacc 109  Q
    ||||||||||||||||||||||||||||| ||||    
T  24408522 atgcataatatatgcaaggtctggggttcaaacc 24408555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 27721710 - 27721665
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||||||||||||||| ||||||||||| | || ||||||||||    
T  27721710 aatgcataatatatgcaaagtctggggttcaacccctggacaccac 27721665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 33014279 - 33014234
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    ||||||||||||||| |||||||||||||| ||||| |||| ||||    
T  33014279 aatgcataatatatgaaaggtctggggttcaaacctcggactccac 33014234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 104
Target Start/End: Original strand, 40446001 - 40446038
Alignment:
Q  67 ataaggaaaatgcataatatatgcaaggtctggggttc 104  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  40446001 ataaggacaatgcataatatatgcaaggtctgaggttc 40446038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 107
Target Start/End: Original strand, 7215776 - 7215808
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaa 107  Q
    ||||||||||||||| |||||||||||||||||    
T  7215776 aatgcataatatatgtaaggtctggggttcgaa 7215808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 107
Target Start/End: Original strand, 11017202 - 11017234
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaa 107  Q
    |||||||||||||||||||||||| ||||||||    
T  11017202 aatgcataatatatgcaaggtctgaggttcgaa 11017234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 107
Target Start/End: Original strand, 32339761 - 32339793
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaa 107  Q
    |||||||||||||||||||||| ||||||||||    
T  32339761 aatgcataatatatgcaaggtccggggttcgaa 32339793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 107
Target Start/End: Complemental strand, 32675328 - 32675296
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaa 107  Q
    ||||||||||||||||||||||| |||||||||    
T  32675328 aatgcataatatatgcaaggtctagggttcgaa 32675296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 34702509 - 34702561
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||| ||||||||||||||| |||||| |||||||||| | ||| ||||||    
T  34702509 taaggacaatgcataatatatgaaaggtccggggttcgaatcctggccaccac 34702561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 107
Target Start/End: Original strand, 42708001 - 42708033
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaa 107  Q
    |||||||||||||||||||||||||| ||||||    
T  42708001 aatgcataatatatgcaaggtctgggattcgaa 42708033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 226 - 288
Target Start/End: Complemental strand, 83965 - 83903
Alignment:
Q  226 cttgatttgtggttttaaccgttttgtcggttataccgtctttttctattggaatttcatctc 288  Q
    ||||||||||||||||||||||||||||| |||||||| |||| ||||||||||| |||||||    
T  83965 cttgatttgtggttttaaccgttttgtcgattataccgcctttatctattggaatctcatctc 83903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 7e-18; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 226 - 288
Target Start/End: Original strand, 40882318 - 40882380
Alignment:
Q  226 cttgatttgtggttttaaccgttttgtcggttataccgtctttttctattggaatttcatctc 288  Q
    ||||||||||||||||||||||||||||| |||||||| |||| ||||||||||| |||||||    
T  40882318 cttgatttgtggttttaaccgttttgtcgattataccgcctttatctattggaatctcatctc 40882380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 120
Target Start/End: Original strand, 6384868 - 6384922
Alignment:
Q  66 aataaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||||| ||||||||||||||||||||||||||||||||||| | ||||||||    
T  6384868 aataaggacaatgcataatatatgcaaggtctggggttcgaaccctagacaccac 6384922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 7872790 - 7872738
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||| |||||||||||||||||||||||||||||||||||  |||||||||    
T  7872790 taaggacaatgcataatatatgcaaggtctggggttcgaacccaggacaccac 7872738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 108
Target Start/End: Original strand, 26009295 - 26009335
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaac 108  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  26009295 taaggaaaatgcataatatatgcaaggtctggggttcgaac 26009335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 37230070 - 37230034
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttc 104  Q
    |||||||||||||||||||||||||||||||||||||    
T  37230070 taaggaaaatgcataatatatgcaaggtctggggttc 37230034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 46987105 - 46987157
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||| |||||||||||||||||||||| ||||||||||||  |||||||||    
T  46987105 taaggacaatgcataatatatgcaaggtccggggttcgaaccccggacaccac 46987157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 6768751 - 6768698
Alignment:
Q  66 aataaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacacca 119  Q
    |||||| | |||||||||||||||||||||||| |||||||| || ||||||||    
T  6768751 aataagaacaatgcataatatatgcaaggtctgaggttcgaatctcggacacca 6768698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 109
Target Start/End: Complemental strand, 21050264 - 21050223
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||| |||||||||||||||||||||||||| ||||||||    
T  21050264 taaggacaatgcataatatatgcaaggtctgggtttcgaacc 21050223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 22690071 - 22690026
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    ||||||||||||||||||||| |||||||||||||  |||||||||    
T  22690071 aatgcataatatatgcaaggtttggggttcgaaccccggacaccac 22690026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 107
Target Start/End: Original strand, 2618698 - 2618737
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaa 107  Q
    |||||| |||||||||||||||||||||| ||||||||||    
T  2618698 taaggacaatgcataatatatgcaaggtccggggttcgaa 2618737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 106
Target Start/End: Original strand, 37864451 - 37864482
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcga 106  Q
    ||||||||||||||||||||||||||||||||    
T  37864451 aatgcataatatatgcaaggtctggggttcga 37864482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 109
Target Start/End: Original strand, 2916128 - 2916162
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||||||||||||||||||||||| ||||||||    
T  2916128 aatgcataatatatgcaaggtctgggattcgaacc 2916162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 109
Target Start/End: Original strand, 9522938 - 9522972
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaacc 109  Q
    ||||||||||||||||||||| |||||||||||||    
T  9522938 aatgcataatatatgcaaggtttggggttcgaacc 9522972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 117
Target Start/End: Complemental strand, 29237592 - 29237550
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacac 117  Q
    ||||||||||||||||||||||  |||||||||||| ||||||    
T  29237592 aatgcataatatatgcaaggtccagggttcgaacctcggacac 29237550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 113
Target Start/End: Complemental strand, 31281800 - 31281762
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttgg 113  Q
    |||||||||||||||||||||||||| ||| ||||||||    
T  31281800 aatgcataatatatgcaaggtctgggattcaaaccttgg 31281762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 104
Target Start/End: Original strand, 5041365 - 5041394
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttc 104  Q
    ||||||||||||||||||||||||||||||    
T  5041365 aatgcataatatatgcaaggtctggggttc 5041394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 5458106 - 5458061
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||||||||||||||||||||||| ||| ||||| | |||||||    
T  5458106 aatgcataatatatgcaaggtctgggattcaaacctcgaacaccac 5458061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 16537571 - 16537526
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||||||||||| ||||||||||||||| ||||| || ||||||    
T  16537571 aatgcataatatatacaaggtctggggttcaaacctcggtcaccac 16537526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 16577891 - 16577850
Alignment:
Q  79 cataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||||||||||||||||||||||| ||||| || ||||||    
T  16577891 cataatatatgcaaggtctggggttcaaacctcggccaccac 16577850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 16587771 - 16587812
Alignment:
Q  79 cataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||||||||||||||||||||||| ||||| || ||||||    
T  16587771 cataatatatgcaaggtctggggttcaaacctcggccaccac 16587812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 16628091 - 16628136
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||||||||||| ||||||||||||||| ||||| || ||||||    
T  16628091 aatgcataatatatacaaggtctggggttcaaacctcggtcaccac 16628136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 109
Target Start/End: Original strand, 18714467 - 18714508
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||| |||||||||||||||||||||| ||||||| ||||    
T  18714467 taaggacaatgcataatatatgcaaggtccggggttcaaacc 18714508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 23069888 - 23069847
Alignment:
Q  79 cataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    ||||||||||||||||| |||||||||||||  |||||||||    
T  23069888 cataatatatgcaaggtatggggttcgaaccccggacaccac 23069847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 27772268 - 27772223
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    ||||||||||||||||||| ||| || |||||||| ||||||||||    
T  27772268 aatgcataatatatgcaagatctaggattcgaaccctggacaccac 27772223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 108
Target Start/End: Complemental strand, 31292804 - 31292771
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaac 108  Q
    ||||||||||| ||||||||||||||||||||||    
T  31292804 aatgcataatacatgcaaggtctggggttcgaac 31292771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 116
Target Start/End: Original strand, 38553844 - 38553885
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggaca 116  Q
    ||||||||||||||| ||||| |||||||||||||| |||||    
T  38553844 aatgcataatatatgtaaggtttggggttcgaacctcggaca 38553885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 116
Target Start/End: Original strand, 43998593 - 43998642
Alignment:
Q  67 ataaggaaaatgcataatatatgcaaggtctggggttcgaaccttggaca 116  Q
    ||||||| |||||||| |||||||||||| ||||||| |||||| |||||    
T  43998593 ataaggacaatgcatagtatatgcaaggtttggggtttgaacctaggaca 43998642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 47155139 - 47155094
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    ||||||||||||||||||||||  |||||||||||  |||||||||    
T  47155139 aatgcataatatatgcaaggtccagggttcgaaccccggacaccac 47155094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 48007582 - 48007537
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    ||||||||||||||||||||||||| ||| |||||  |||||||||    
T  48007582 aatgcataatatatgcaaggtctggagtttgaacccaggacaccac 48007537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 394394 - 394362
Alignment:
Q  76 atgcataatatatgcaaggtctggggttcgaac 108  Q
    ||||||||||||||||||||| |||||||||||    
T  394394 atgcataatatatgcaaggtccggggttcgaac 394362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 107
Target Start/End: Original strand, 1046582 - 1046614
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaa 107  Q
    ||||||||||||||| |||||||||||||||||    
T  1046582 aatgcataatatatgtaaggtctggggttcgaa 1046614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 5579721 - 5579753
Alignment:
Q  77 tgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||||||||||||||||||||||||| ||||    
T  5579721 tgcataatatatgcaaggtctggggttcaaacc 5579753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 107
Target Start/End: Original strand, 14671188 - 14671228
Alignment:
Q  67 ataaggaaaatgcataatatatgcaaggtctggggttcgaa 107  Q
    ||||||| |||||||||||||| ||||||| ||||||||||    
T  14671188 ataaggacaatgcataatatatacaaggtccggggttcgaa 14671228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 109
Target Start/End: Original strand, 19793541 - 19793581
Alignment:
Q  69 aaggaaaatgcataatatatgcaaggtctggggttcgaacc 109  Q
    ||||| |||| |||||||||| |||||||||||||||||||    
T  19793541 aaggacaatgtataatatatgtaaggtctggggttcgaacc 19793581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 107
Target Start/End: Complemental strand, 22777402 - 22777363
Alignment:
Q  67 ataaggaaaatgcataatatatgcaaggtctggggttcgaa 107  Q
    ||||||| |||||||||||||||||||||| ||||||||||    
T  22777402 ataaggacaatgcataatatatgcaaggtc-ggggttcgaa 22777363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 30296352 - 30296388
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttc 104  Q
    |||||| |||| |||||||||||||||||||||||||    
T  30296352 taaggacaatgtataatatatgcaaggtctggggttc 30296388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 107
Target Start/End: Original strand, 37624569 - 37624601
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaa 107  Q
    |||||||||||||||||||||| ||||||||||    
T  37624569 aatgcataatatatgcaaggtcgggggttcgaa 37624601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 108
Target Start/End: Complemental strand, 40762249 - 40762209
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaac 108  Q
    |||||| ||||||||||||||||||||| | ||||||||||    
T  40762249 taaggacaatgcataatatatgcaaggtatagggttcgaac 40762209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 107
Target Start/End: Original strand, 42336088 - 42336128
Alignment:
Q  67 ataaggaaaatgcataatatatgcaaggtctggggttcgaa 107  Q
    ||||||| ||||||||||| |||||||||| ||||||||||    
T  42336088 ataaggacaatgcataatacatgcaaggtccggggttcgaa 42336128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 107
Target Start/End: Original strand, 45979143 - 45979171
Alignment:
Q  79 cataatatatgcaaggtctggggttcgaa 107  Q
    |||||||||||||||||||||||||||||    
T  45979143 cataatatatgcaaggtctggggttcgaa 45979171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 107
Target Start/End: Original strand, 48527208 - 48527248
Alignment:
Q  67 ataaggaaaatgcataatatatgcaaggtctggggttcgaa 107  Q
    ||||||| |||||||||||||||||||||| || |||||||    
T  48527208 ataaggacaatgcataatatatgcaaggtccggagttcgaa 48527248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 25902799 - 25902851
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  25902799 taaggataatgtataatatatgcaaggtctggggttcgaaccttggacaccac 25902851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 1149111 - 1149059
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||| ||||||||||||||||||||||| ||||||||||| ||||||||||    
T  1149111 taaggacaatgcataatatatgcaaggtctagggttcgaaccctggacaccac 1149059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 263
Target Start/End: Complemental strand, 48601392 - 48601333
Alignment:
Q  204 atccctctgagcttcatttgtacttgatttgtggttttaaccgttttgtcggttataccg 263  Q
    |||||||  ||||||||||||| |||||||||||||||||||||||| | ||||||||||    
T  48601392 atccctcaaagcttcatttgtatttgatttgtggttttaaccgttttattggttataccg 48601333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 4216442 - 4216390
Alignment:
Q  67 ataaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    ||||||| |||||||||||||||||||||| |||||||||||| ||||||||||    
T  4216442 ataaggacaatgcataatatatgcaaggtc-ggggttcgaaccctggacaccac 4216390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 109
Target Start/End: Complemental strand, 25505743 - 25505702
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  25505743 taaggacaatgcataatatatgcaaggtctggggttcgaacc 25505702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 109
Target Start/End: Complemental strand, 35191859 - 35191818
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  35191859 taaggacaatgcataatatatgcaaggtctggggttcgaacc 35191818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 53207996 - 53208041
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||    
T  53207996 aatgcataatatatgcaaggtctggggttcgaacccttgacaccac 53208041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 119
Target Start/End: Original strand, 10594696 - 10594747
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacacca 119  Q
    |||||| ||||||||||||||||||||| | |||||| ||||||||||||||    
T  10594696 taaggacaatgcataatatatgcaaggtttagggttcaaaccttggacacca 10594747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 119
Target Start/End: Original strand, 14741813 - 14741864
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacacca 119  Q
    |||||| ||||||||||||||||||||| ||| |||||||||| ||||||||    
T  14741813 taaggacaatgcataatatatgcaaggtttggagttcgaacctcggacacca 14741864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 109
Target Start/End: Complemental strand, 13829112 - 13829078
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||||||||||||||||||||||||||||||||    
T  13829112 aatgcataatatatgcaaggtctggggttcgaacc 13829078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 45096044 - 45096086
Alignment:
Q  67 ataaggaaaatgcataatatatgcaaggtctggggttcgaacc 109  Q
    ||||||| |||||||||||||||||||||||| ||||||||||    
T  45096044 ataaggacaatgcataatatatgcaaggtctgtggttcgaacc 45096086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 109
Target Start/End: Complemental strand, 21914113 - 21914072
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  21914113 taaggacaatgcataatatatgcaaggtatggggttcgaacc 21914072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 109
Target Start/End: Complemental strand, 54230141 - 54230100
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  54230141 taaggacaatgcataatatatgcaaggtttggggttcgaacc 54230100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 28130976 - 28130924
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||| ||||||||||||||||||||||||||||| ||| |  |||||||||    
T  28130976 taaggacaatgcataatatatgcaaggtctggggtttgaatcccggacaccac 28130924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 35347331 - 35347295
Alignment:
Q  74 aaatgcataatatatgcaaggtctggggttcgaacct 110  Q
    ||||||||||||||||||||||||||||||| |||||    
T  35347331 aaatgcataatatatgcaaggtctggggttcaaacct 35347295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 35863855 - 35863803
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||| ||| |||||||||||||||||||||||||| ||||| || ||||||    
T  35863855 taaggacaatacataatatatgcaaggtctggggttcaaacctcggccaccac 35863803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 107
Target Start/End: Original strand, 53996325 - 53996357
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaa 107  Q
    |||||||||||||||||||||||||||||||||    
T  53996325 aatgcataatatatgcaaggtctggggttcgaa 53996357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 120
Target Start/End: Complemental strand, 14149587 - 14149536
Alignment:
Q  69 aaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    ||||| |||| ||||| ||||||||||||||||||||||||  |||||||||    
T  14149587 aaggacaatgtataatgtatgcaaggtctggggttcgaaccccggacaccac 14149536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 107
Target Start/End: Original strand, 17588381 - 17588420
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaa 107  Q
    |||||| ||||||||||||||||||| |||||||||||||    
T  17588381 taaggacaatgcataatatatgcaagatctggggttcgaa 17588420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 107
Target Start/End: Original strand, 21513307 - 21513346
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaa 107  Q
    |||||| |||||||||| ||||||||||||||||||||||    
T  21513307 taaggacaatgcataatttatgcaaggtctggggttcgaa 21513346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 74 - 109
Target Start/End: Original strand, 25730427 - 25730462
Alignment:
Q  74 aaatgcataatatatgcaaggtctggggttcgaacc 109  Q
    ||||||||||||||| ||||||||||||||||||||    
T  25730427 aaatgcataatatatacaaggtctggggttcgaacc 25730462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 119
Target Start/End: Original strand, 30200845 - 30200896
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacacca 119  Q
    |||||| ||||||||||||||||||||| || ||||||||||  ||||||||    
T  30200845 taaggacaatgcataatatatgcaaggtttgaggttcgaaccccggacacca 30200896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 49131797 - 49131725
Alignment:
Q  215 cttcatttgtacttgatttgtggttttaaccgttttgtcggttataccgtctttttctattggaatttcatctca 289  Q
    |||| |||||| ||||||||||| |||||| ||||||| ||||||||| || |||  ||||||||| ||||||||    
T  49131797 cttcgtttgtatttgatttgtggctttaacggttttgttggttataccatccttt--tattggaatctcatctca 49131725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 120
Target Start/End: Original strand, 10617587 - 10617625
Alignment:
Q  82 aatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    ||||||| |||||||||||||||||||| ||||||||||    
T  10617587 aatatatacaaggtctggggttcgaaccctggacaccac 10617625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 110
Target Start/End: Original strand, 21245812 - 21245854
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaacct 110  Q
    |||||| ||||||||||||||| |||||||||||||| |||||    
T  21245812 taaggacaatgcataatatatgtaaggtctggggttcaaacct 21245854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 109
Target Start/End: Complemental strand, 25441535 - 25441501
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||||||||||||||||||||||||||| ||||    
T  25441535 aatgcataatatatgcaaggtctggggttcaaacc 25441501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 117
Target Start/End: Complemental strand, 31797292 - 31797251
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacac 117  Q
    ||||||||||||||||||||||| |||||||||||||| ||||    
T  31797292 aatgcataatatatgcaaggtct-gggttcgaaccttgaacac 31797251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 2153536 - 2153491
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||||||||||||||||||||||||||  |||| ||| ||||||    
T  2153536 aatgcataatatatgcaaggtctggggtttaaaccctggccaccac 2153491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 2453839 - 2453884
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    ||||||||||||||||||||| | |||||||||||| || ||||||    
T  2453839 aatgcataatatatgcaaggtttagggttcgaacctcggccaccac 2453884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 5702213 - 5702169
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    ||||||||||||||||||||| || |||||||||| ||||||||||    
T  5702213 aatgcataatatatgcaaggtttgaggttcgaacc-tggacaccac 5702169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 104
Target Start/End: Original strand, 8238590 - 8238619
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttc 104  Q
    ||||||||||||||||||||||||||||||    
T  8238590 aatgcataatatatgcaaggtctggggttc 8238619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 14771357 - 14771402
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||||||||||||||||||||| |||||||| |  |||||||||    
T  14771357 aatgcataatatatgcaaggtctgaggttcgaatcccggacaccac 14771402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 108
Target Start/End: Complemental strand, 19939076 - 19939043
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaac 108  Q
    ||||||||||||||| ||||||||||||||||||    
T  19939076 aatgcataatatatgaaaggtctggggttcgaac 19939043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 105
Target Start/End: Original strand, 28266735 - 28266772
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcg 105  Q
    |||||| |||||||||||||||||||||| ||||||||    
T  28266735 taaggacaatgcataatatatgcaaggtccggggttcg 28266772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 108
Target Start/End: Original strand, 42074129 - 42074162
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaac 108  Q
    |||||||||||||||||||||||| |||||||||    
T  42074129 aatgcataatatatgcaaggtctgaggttcgaac 42074162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 45431974 - 45432019
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||||||||||||||||||| ||||||| |||| ||| ||||||    
T  45431974 aatgcataatatatgcaaggtccggggttcaaaccctggccaccac 45432019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 104
Target Start/End: Complemental strand, 49975840 - 49975811
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttc 104  Q
    ||||||||||||||||||||||||||||||    
T  49975840 aatgcataatatatgcaaggtctggggttc 49975811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 109
Target Start/End: Original strand, 52119395 - 52119436
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||| |||||||||||||||||||||  ||||||||||||    
T  52119395 taaggacaatgcataatatatgcaaggttcggggttcgaacc 52119436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 1743960 - 1743928
Alignment:
Q  76 atgcataatatatgcaaggtctggggttcgaac 108  Q
    ||||||||||||||||||||||||||| |||||    
T  1743960 atgcataatatatgcaaggtctggggtacgaac 1743928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 6835884 - 6835852
Alignment:
Q  77 tgcataatatatgcaaggtctggggttcgaacc 109  Q
    ||||||||||||||||||||| |||||||||||    
T  6835884 tgcataatatatgcaaggtctagggttcgaacc 6835852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 107
Target Start/End: Original strand, 7938750 - 7938782
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaa 107  Q
    |||||||||||||| ||||||||||||||||||    
T  7938750 aatgcataatatatacaaggtctggggttcgaa 7938782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 107
Target Start/End: Original strand, 8139741 - 8139773
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaa 107  Q
    |||||||||||||||||||||||| ||||||||    
T  8139741 aatgcataatatatgcaaggtctgaggttcgaa 8139773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 107
Target Start/End: Complemental strand, 12976637 - 12976605
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaa 107  Q
    |||||||||||||||||||||||||| ||||||    
T  12976637 aatgcataatatatgcaaggtctgggattcgaa 12976605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 20671885 - 20671833
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||| ||||||||||| ||||| |||| |||||||||||| || |||||||    
T  20671885 taaggacaatgcataatacatgcacggtccggggttcgaaccctgcacaccac 20671833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 107
Target Start/End: Complemental strand, 39408299 - 39408267
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaa 107  Q
    |||| ||||||||||||||||||||||||||||    
T  39408299 aatgtataatatatgcaaggtctggggttcgaa 39408267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 48315066 - 48315030
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttc 104  Q
    |||||| |||||||||||||||||||||| |||||||    
T  48315066 taaggataatgcataatatatgcaaggtccggggttc 48315030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 107
Target Start/End: Original strand, 52575973 - 52576005
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaa 107  Q
    ||||||||| |||||||||||||||||||||||    
T  52575973 aatgcataaaatatgcaaggtctggggttcgaa 52576005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 215 - 287
Target Start/End: Original strand, 14591 - 14663
Alignment:
Q  215 cttcatttgtacttgatttgtggttttaaccgttttgtcggttataccgtctttttctattggaatttcatct 287  Q
    |||||||||| ||||||||||||||||| ||||| ||||| ||||||||||||| | |||| |||| ||||||    
T  14591 cttcatttgttcttgatttgtggttttagccgttctgtcgattataccgtctttatttattagaatctcatct 14663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 2264816 - 2264868
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||||||||||||||||||| ||||| ||||||||||||| ||||||||||    
T  2264816 taaggaaaatgcataatatatgtaaggtttggggttcgaaccctggacaccac 2264868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 35685103 - 35685051
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||| ||||||||||||||||||||||| |||||||||| |||||||||||    
T  35685103 taaggacaatgcataatatatgcaaggtctagggttcgaactttggacaccac 35685051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 27152379 - 27152424
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||||||||||||||||||||||||||||||||  |||||||||    
T  27152379 aatgcataatatatgcaaggtctggggttcgaacccaggacaccac 27152424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 24393264 - 24393316
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||| |||||||||||||||||||||||| ||||||||||  |||||||||    
T  24393264 taaggacaatgcataatatatgcaaggtctgaggttcgaaccccggacaccac 24393316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 24593395 - 24593447
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||| |||||||||||||||||||||| |||||||||||| || |||||||    
T  24593395 taaggacaatgcataatatatgcaaggtccggggttcgaaccctgaacaccac 24593447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 109
Target Start/End: Original strand, 2256997 - 2257031
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||||||||||||||||||||||||||||||||    
T  2256997 aatgcataatatatgcaaggtctggggttcgaacc 2257031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 110
Target Start/End: Original strand, 12124564 - 12124606
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaacct 110  Q
    |||||| |||||||||||||||||||||| |||||||||||||    
T  12124564 taaggacaatgcataatatatgcaaggtccggggttcgaacct 12124606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 5980245 - 5980298
Alignment:
Q  67 ataaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    ||||||| |||||||||||||||||||||||   |||||||| |||||||||||    
T  5980245 ataaggacaatgcataatatatgcaaggtctaaagttcgaacattggacaccac 5980298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 109
Target Start/End: Complemental strand, 15654911 - 15654870
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||| ||||||||| |||||||||||||||||||||||||    
T  15654911 taaggataatgcataaaatatgcaaggtctggggttcgaacc 15654870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 36359340 - 36359385
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||||||||||||||||||| ||||||| |||||||| ||||||    
T  36359340 aatgcataatatatgcaaggtccggggttcaaaccttggccaccac 36359385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 107
Target Start/End: Complemental strand, 6579316 - 6579284
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaa 107  Q
    |||||||||||||||||||||||||||||||||    
T  6579316 aatgcataatatatgcaaggtctggggttcgaa 6579284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 16204860 - 16204824
Alignment:
Q  67 ataaggaaaatgcataatatatgcaaggtctggggtt 103  Q
    ||||||| |||||||||||||||||||||||||||||    
T  16204860 ataaggacaatgcataatatatgcaaggtctggggtt 16204824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 18910575 - 18910523
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||| || ||||||||||||||||| || ||||||||||| ||||||||||    
T  18910575 taaggacaacgcataatatatgcaaggcctagggttcgaaccctggacaccac 18910523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 24548030 - 24548082
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||| ||| |||||||||| ||||||| |||||||||||| ||||||||||    
T  24548030 taaggacaatccataatatattcaaggtccggggttcgaaccctggacaccac 24548082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 32091213 - 32091161
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||||||||||||||||||||||||||| ||||| ||| ||  ||||||||    
T  32091213 taaggaaaatgcataatatatgcaaggtctagggtttgaatctcagacaccac 32091161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 34903536 - 34903588
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||| | |||||||||||||||||||||| ||||||||||  |||||||||    
T  34903536 taaggacagtgcataatatatgcaaggtctgaggttcgaaccccggacaccac 34903588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 106
Target Start/End: Complemental strand, 18782575 - 18782544
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcga 106  Q
    ||||||||||||||||||||||||||||||||    
T  18782575 aatgcataatatatgcaaggtctggggttcga 18782544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 110
Target Start/End: Complemental strand, 41526811 - 41526776
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaacct 110  Q
    |||||||| |||||||||||||||||||||||||||    
T  41526811 aatgcatagtatatgcaaggtctggggttcgaacct 41526776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 9389486 - 9389528
Alignment:
Q  67 ataaggaaaatgcataatatatgcaaggtctggggttcgaacc 109  Q
    ||||||| |||| |||||||||||||||||||| |||||||||    
T  9389486 ataaggataatgtataatatatgcaaggtctggagttcgaacc 9389528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 11810425 - 11810383
Alignment:
Q  67 ataaggaaaatgcataatatatgcaaggtctggggttcgaacc 109  Q
    ||||||| |||||||||||| ||||| ||||||||||||||||    
T  11810425 ataaggacaatgcataatatgtgcaaagtctggggttcgaacc 11810383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 110
Target Start/End: Original strand, 12124703 - 12124745
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaacct 110  Q
    |||||| |||||||||||||||||||||| || ||||||||||    
T  12124703 taaggacaatgcataatatatgcaaggtccggagttcgaacct 12124745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 12413511 - 12413553
Alignment:
Q  67 ataaggaaaatgcataatatatgcaaggtctggggttcgaacc 109  Q
    ||||||| |||||||||||||||||||||||| ||||| ||||    
T  12413511 ataaggacaatgcataatatatgcaaggtctgaggttcaaacc 12413553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 12425571 - 12425613
Alignment:
Q  67 ataaggaaaatgcataatatatgcaaggtctggggttcgaacc 109  Q
    ||||||| |||||||||||||||||||||||| ||||| ||||    
T  12425571 ataaggacaatgcataatatatgcaaggtctgaggttcaaacc 12425613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 109
Target Start/End: Complemental strand, 12599896 - 12599866
Alignment:
Q  79 cataatatatgcaaggtctggggttcgaacc 109  Q
    |||||||||||||||||||||||||||||||    
T  12599896 cataatatatgcaaggtctggggttcgaacc 12599866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 109
Target Start/End: Complemental strand, 23407053 - 23407019
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||||||||||||||||||||||||||| ||||    
T  23407053 aatgcataatatatgcaaggtctggggttcaaacc 23407019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 109
Target Start/End: Complemental strand, 24592881 - 24592847
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||||||||||||||||||||||||||| ||||    
T  24592881 aatgcataatatatgcaaggtctggggttcaaacc 24592847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 109
Target Start/End: Complemental strand, 25274864 - 25274830
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaacc 109  Q
    ||||||||||||||| |||||||||||||||||||    
T  25274864 aatgcataatatatgtaaggtctggggttcgaacc 25274830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 109
Target Start/End: Complemental strand, 2939813 - 2939784
Alignment:
Q  80 ataatatatgcaaggtctggggttcgaacc 109  Q
    ||||||||||||||||||||||||||||||    
T  2939813 ataatatatgcaaggtctggggttcgaacc 2939784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 3503000 - 3503045
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||||||||||||||||||||| | |||||||| || |||||||    
T  3503000 aatgcataatatatgcaaggtctgagattcgaaccctgaacaccac 3503045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 105
Target Start/End: Original strand, 6141239 - 6141276
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcg 105  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  6141239 taaggacaatgcataatatatgcaaggtctagggttcg 6141276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 18611998 - 18611953
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    ||||||||||||||||||||| |||||||| |||||  ||||||||    
T  18611998 aatgcataatatatgcaaggtttggggttcaaacctcagacaccac 18611953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 108
Target Start/End: Original strand, 35727463 - 35727496
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaac 108  Q
    ||||||||||||||||||||| ||||||||||||    
T  35727463 aatgcataatatatgcaaggtttggggttcgaac 35727496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 37320552 - 37320507
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||||||||||||||||||  | |||||||||| ||||||||||    
T  37320552 aatgcataatatatgcaaggttcgaggttcgaaccatggacaccac 37320507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 100
Target Start/End: Original strand, 39761456 - 39761489
Alignment:
Q  67 ataaggaaaatgcataatatatgcaaggtctggg 100  Q
    ||||||| ||||||||||||||||||||||||||    
T  39761456 ataaggacaatgcataatatatgcaaggtctggg 39761489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 109
Target Start/End: Complemental strand, 43117232 - 43117191
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||| |||||||||||||||||||||||| ||||| ||||    
T  43117232 taaggacaatgcataatatatgcaaggtctgaggttcaaacc 43117191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 103
Target Start/End: Complemental strand, 833104 - 833076
Alignment:
Q  75 aatgcataatatatgcaaggtctggggtt 103  Q
    |||||||||||||||||||||||||||||    
T  833104 aatgcataatatatgcaaggtctggggtt 833076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 4056809 - 4056861
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||| |||||||||||||||||||||| || ||||||| || || ||||||    
T  4056809 taaggacaatgcataatatatgcaaggtccggagttcgaatctcgggcaccac 4056861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 103
Target Start/End: Complemental strand, 4122048 - 4122020
Alignment:
Q  75 aatgcataatatatgcaaggtctggggtt 103  Q
    |||||||||||||||||||||||||||||    
T  4122048 aatgcataatatatgcaaggtctggggtt 4122020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 108
Target Start/End: Complemental strand, 5137847 - 5137807
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaac 108  Q
    |||||| |||| ||||||||||||||||| |||||||||||    
T  5137847 taaggacaatgtataatatatgcaaggtccggggttcgaac 5137807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 10065492 - 10065544
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||| ||||||||||||||||||| |   ||||||||||| ||||||||||    
T  10065492 taaggacaatgcataatatatgcaagtttcagggttcgaaccctggacaccac 10065544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 107
Target Start/End: Original strand, 12619370 - 12619402
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaa 107  Q
    ||||||||||||||||||| |||||||||||||    
T  12619370 aatgcataatatatgcaagatctggggttcgaa 12619402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 18231515 - 18231463
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||| ||||||||||||||||||||| ||| | ||||| || |||||||||    
T  18231515 taaggacaatgcataatatatgcaaggtttggagatcgaatctcggacaccac 18231463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 18324936 - 18324884
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||| ||||||||||||||||||| ||| || |||||||| || |||||||    
T  18324936 taaggacaatgcataatatatgcaagatctaggattcgaaccctgaacaccac 18324884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 107
Target Start/End: Original strand, 20455917 - 20455949
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaa 107  Q
    |||||||||||||||||||||| ||||||||||    
T  20455917 aatgcataatatatgcaaggtccggggttcgaa 20455949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 107
Target Start/End: Original strand, 21258642 - 21258674
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaa 107  Q
    ||||||| |||||||||||||||||||||||||    
T  21258642 aatgcatgatatatgcaaggtctggggttcgaa 21258674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 27411120 - 27411152
Alignment:
Q  77 tgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||||||||||||||||| ||||||||||||    
T  27411120 tgcataatatatgcaaggtccggggttcgaacc 27411152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 28771601 - 28771653
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||| ||||||||||||||||||| || | ||||||||||  |||||||||    
T  28771601 taaggacaatgcataatatatgcaagatccgcggttcgaaccccggacaccac 28771653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 28592722 - 28592677
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||    
T  28592722 aatgcataatatatgtaaggtctggggttcgaacctcggacaccac 28592677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 120
Target Start/End: Complemental strand, 9334021 - 9333970
Alignment:
Q  69 aaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    ||||| ||||||||||||||| ||||| |||||||||||||| |||||||||    
T  9334021 aaggacaatgcataatatatgtaaggtttggggttcgaacctcggacaccac 9333970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 109
Target Start/End: Original strand, 12808895 - 12808929
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||||||||||||||||||||||||||||||||    
T  12808895 aatgcataatatatgcaaggtctggggttcgaacc 12808929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 30639461 - 30639417
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacacca 119  Q
    |||||||||||||||||||||||| |||||||| || ||||||||    
T  30639461 aatgcataatatatgcaaggtctgaggttcgaatctcggacacca 30639417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 33824899 - 33824951
Alignment:
Q  67 ataaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacacca 119  Q
    ||||||| |||||||||||||||||||||| ||||||| ||||| || |||||    
T  33824899 ataaggacaatgcataatatatgcaaggtccggggttcaaacctcggccacca 33824951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 109
Target Start/End: Complemental strand, 655784 - 655750
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||||||||||||||||||| ||||||||||||    
T  655784 aatgcataatatatgcaaggtccggggttcgaacc 655750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 109
Target Start/End: Complemental strand, 2726452 - 2726418
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||||||||||||||||||| ||||||||||||    
T  2726452 aatgcataatatatgcaaggtccggggttcgaacc 2726418  T

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Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 109
Target Start/End: Original strand, 9111073 - 9111107
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||||||||||||||||||| ||||||||||||    
T  9111073 aatgcataatatatgcaaggtccggggttcgaacc 9111107  T

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Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 109
Target Start/End: Original strand, 9977083 - 9977117
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||||||||||||||||||||||||||| ||||    
T  9977083 aatgcataatatatgcaaggtctggggttcaaacc 9977117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 109
Target Start/End: Original strand, 15155761 - 15155795
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||||||||||||||||||||||||||| ||||    
T  15155761 aatgcataatatatgcaaggtctggggttcaaacc 15155795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 109
Target Start/End: Original strand, 20744164 - 20744198
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||||||||||||||||||||||||||| ||||    
T  20744164 aatgcataatatatgcaaggtctggggttcaaacc 20744198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 104
Target Start/End: Original strand, 334166 - 334195
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttc 104  Q
    ||||||||||||||||||||||||||||||    
T  334166 aatgcataatatatgcaaggtctggggttc 334195  T

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Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 4450288 - 4450333
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||||||||||||||||||| |||||||||| || || ||||||    
T  4450288 aatgcataatatatgcaaggtccggggttcgaatctcggtcaccac 4450333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 7273077 - 7273122
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||| ||||||||||||||||||| |||||||||| | ||||||||    
T  7273077 aatgaataatatatgcaaggtctgtggttcgaaccctcgacaccac 7273122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 9923258 - 9923311
Alignment:
Q  67 ataaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    ||||||| |||||||||||||| ||||||  ||| ||| |||||||||||||||    
T  9923258 ataaggacaatgcataatatatacaaggttcgggattcaaaccttggacaccac 9923311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 17151266 - 17151307
Alignment:
Q  79 cataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||||||||||||||||||||||| ||||| || ||||||    
T  17151266 cataatatatgcaaggtctggggttcaaacctcggccaccac 17151307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 4467297 - 4467349
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||| ||||||| ||||||||||||||||||| || ||||| || ||||||    
T  4467297 taaggacaatgcatgatatatgcaaggtctggggctcaaacctcggccaccac 4467349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 104
Target Start/End: Complemental strand, 10497005 - 10496977
Alignment:
Q  76 atgcataatatatgcaaggtctggggttc 104  Q
    |||||||||||||||||||||||||||||    
T  10497005 atgcataatatatgcaaggtctggggttc 10496977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 14515334 - 14515282
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||| ||||||||||||||  || || | ||||||||||||||||||||||    
T  14515334 taaggacaatgcataatatatataaagtttagggttcgaaccttggacaccac 14515282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 15291732 - 15291680
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||| |||| |||||||||||||||| || ||||||||| | |||||||||    
T  15291732 taaggacaatgaataatatatgcaaggtttgaggttcgaacttcggacaccac 15291680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 17177988 - 17177936
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||||||||||||||||||| ||||| || |||||||| || || ||||||    
T  17177988 taaggaaaatgcataatatatgtaaggtatgaggttcgaatctcggccaccac 17177936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 22414490 - 22414454
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttc 104  Q
    |||||| ||||||||||||||| ||||||||||||||    
T  22414490 taaggataatgcataatatatgaaaggtctggggttc 22414454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 109
Target Start/End: Complemental strand, 27907992 - 27907952
Alignment:
Q  69 aaggaaaatgcataatatatgcaaggtctggggttcgaacc 109  Q
    ||||| ||||||||| |||||||||||||||||||| ||||    
T  27907992 aaggataatgcataaaatatgcaaggtctggggttcaaacc 27907952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 109
Target Start/End: Original strand, 33930519 - 33930555
Alignment:
Q  73 aaaatgcataatatatgcaaggtctggggttcgaacc 109  Q
    ||||||||||||||||||||||| | |||||||||||    
T  33930519 aaaatgcataatatatgcaaggtttagggttcgaacc 33930555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 4383 - 4331
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||| ||||||||||||||| || || |||||||||||||| |||||||||    
T  4383 taaggataatgcataatatatggaatgtttggggttcgaacctcggacaccac 4331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 42375 - 42331
Alignment:
Q  69 aaggaaaatgcataatatatgcaaggtctggggttcgaaccttgg 113  Q
    ||||| |||||||||||||||||||||||||||||| || |||||    
T  42375 aaggacaatgcataatatatgcaaggtctggggttcaaaacttgg 42331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 107
Target Start/End: Original strand, 75344 - 75383
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaa 107  Q
    |||||| |||||||||||||||||||||| ||||||||||    
T  75344 taaggacaatgcataatatatgcaaggtccggggttcgaa 75383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 240
Target Start/End: Complemental strand, 12701 - 12631
Alignment:
Q  170 gtttatttgtattgagggtgtaaaatatgggcttatccctctgagcttcatttgtacttgatttgtggttt 240  Q
    |||||||||||||||||||||| || | ||||| |||||||| || ||| ||| ||||||| || ||||||    
T  12701 gtttatttgtattgagggtgtataacacgggctaatccctctaagtttcgtttctacttgacttatggttt 12631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 109
Target Start/End: Complemental strand, 15972 - 15931
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||| |||| ||||||||||||||||||||||||| ||||    
T  15972 taaggacaatgtataatatatgcaaggtctggggttcaaacc 15931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 109
Target Start/End: Original strand, 25408 - 25449
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaacc 109  Q
    |||||| ||||||||||||||||||||||  |||||||||||    
T  25408 taaggacaatgcataatatatgcaaggtccagggttcgaacc 25449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 45442 - 45483
Alignment:
Q  79 cataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    |||||||||||||||||| |||||| ||||||||| ||||||    
T  45442 cataatatatgcaaggtccggggtttgaaccttggccaccac 45483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 17530 - 17575
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttcgaaccttggacaccac 120  Q
    ||||||||||||||||||||| ||||||||||| |  |||||||||    
T  17530 aatgcataatatatgcaaggtttggggttcgaatcccggacaccac 17575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 104
Target Start/End: Original strand, 99063 - 99092
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttc 104  Q
    ||||||||||||||||||||||||||||||    
T  99063 aatgcataatatatgcaaggtctggggttc 99092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 104
Target Start/End: Original strand, 122917 - 122946
Alignment:
Q  75 aatgcataatatatgcaaggtctggggttc 104  Q
    ||||||||||||||||||||||||||||||    
T  122917 aatgcataatatatgcaaggtctggggttc 122946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 108
Target Start/End: Complemental strand, 34930 - 34890
Alignment:
Q  68 taaggaaaatgcataatatatgcaaggtctggggttcgaac 108  Q
    |||||| ||||||||||||||||||||||  ||||||||||    
T  34930 taaggacaatgcataatatatgcaaggtccagggttcgaac 34890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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