View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21356_low_17 (Length: 297)

Name: NF21356_low_17
Description: NF21356
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21356_low_17
NF21356_low_17
[»] chr6 (18 HSPs)
chr6 (26-211)||(10293708-10293905)
chr6 (250-296)||(22414469-22414515)
chr6 (249-297)||(18256876-18256924)
chr6 (253-297)||(32193879-32193923)
chr6 (250-297)||(788860-788907)
chr6 (250-297)||(7083012-7083059)
chr6 (250-297)||(12333588-12333635)
chr6 (250-297)||(26587386-26587433)
chr6 (250-297)||(32053782-32053829)
chr6 (249-295)||(12336348-12336394)
chr6 (251-297)||(20744133-20744179)
chr6 (250-292)||(34828300-34828342)
chr6 (253-297)||(2473600-2473644)
chr6 (249-297)||(3808138-3808186)
chr6 (251-295)||(5008834-5008878)
chr6 (253-297)||(10780127-10780171)
chr6 (256-296)||(22576160-22576200)
chr6 (253-297)||(24269880-24269924)
[»] scaffold0005 (1 HSPs)
scaffold0005 (248-297)||(239799-239848)
[»] chr4 (29 HSPs)
chr4 (248-297)||(14577527-14577576)
chr4 (250-296)||(21465605-21465651)
chr4 (251-297)||(37921741-37921787)
chr4 (253-297)||(38812869-38812913)
chr4 (250-297)||(7230274-7230321)
chr4 (250-297)||(34247434-34247481)
chr4 (250-295)||(18915068-18915113)
chr4 (253-297)||(8027417-8027461)
chr4 (257-297)||(12058320-12058360)
chr4 (249-297)||(12322666-12322714)
chr4 (248-296)||(36071136-36071184)
chr4 (250-297)||(2186353-2186400)
chr4 (250-297)||(10303531-10303578)
chr4 (250-297)||(20799414-20799461)
chr4 (250-297)||(28435268-28435315)
chr4 (250-297)||(36203230-36203277)
chr4 (250-297)||(49473639-49473686)
chr4 (250-297)||(50362159-50362206)
chr4 (250-297)||(52270050-52270097)
chr4 (251-297)||(16304118-16304164)
chr4 (251-297)||(37193244-37193290)
chr4 (250-296)||(43722759-43722805)
chr4 (248-297)||(23809941-23809990)
chr4 (251-296)||(32006495-32006540)
chr4 (256-297)||(56204947-56204988)
chr4 (257-297)||(22279540-22279580)
chr4 (253-297)||(30380527-30380571)
chr4 (256-296)||(34595957-34595997)
chr4 (257-297)||(46676518-46676558)
[»] chr1 (28 HSPs)
chr1 (248-297)||(31890769-31890818)
chr1 (250-297)||(1794590-1794637)
chr1 (250-297)||(5279390-5279437)
chr1 (250-297)||(49183167-49183214)
chr1 (253-297)||(34733397-34733441)
chr1 (249-297)||(44641520-44641568)
chr1 (251-295)||(51127912-51127956)
chr1 (250-297)||(21400043-21400090)
chr1 (248-295)||(27127216-27127263)
chr1 (250-297)||(27449465-27449512)
chr1 (250-297)||(28032278-28032325)
chr1 (250-297)||(38448886-38448933)
chr1 (249-288)||(40693679-40693718)
chr1 (250-297)||(42045392-42045439)
chr1 (249-295)||(17139539-17139585)
chr1 (255-297)||(17283950-17283992)
chr1 (255-297)||(24124850-24124892)
chr1 (250-296)||(40735026-40735072)
chr1 (250-296)||(41573290-41573336)
chr1 (250-296)||(44243867-44243913)
chr1 (256-297)||(34521210-34521251)
chr1 (250-295)||(41884827-41884872)
chr1 (248-297)||(48730659-48730708)
chr1 (252-297)||(49875619-49875664)
chr1 (249-297)||(24324420-24324468)
chr1 (249-297)||(25532966-25533014)
chr1 (256-296)||(41926822-41926862)
chr1 (250-294)||(47528470-47528514)
[»] chr7 (31 HSPs)
chr7 (250-297)||(33473541-33473588)
chr7 (256-297)||(3533028-3533069)
chr7 (251-297)||(3953436-3953482)
chr7 (248-297)||(35763697-35763746)
chr7 (252-297)||(44558794-44558839)
chr7 (249-297)||(10244720-10244768)
chr7 (249-297)||(39801699-39801747)
chr7 (246-297)||(3830058-3830109)
chr7 (248-295)||(5352321-5352368)
chr7 (250-297)||(20085779-20085825)
chr7 (250-297)||(30857242-30857289)
chr7 (250-297)||(37930038-37930085)
chr7 (250-297)||(40752859-40752906)
chr7 (255-297)||(4340126-4340168)
chr7 (249-295)||(5526718-5526764)
chr7 (250-296)||(8227343-8227389)
chr7 (250-296)||(20205816-20205862)
chr7 (250-292)||(28703502-28703544)
chr7 (256-297)||(8615023-8615064)
chr7 (256-297)||(21050242-21050283)
chr7 (250-295)||(21099795-21099840)
chr7 (256-297)||(24991781-24991822)
chr7 (252-297)||(25246767-25246812)
chr7 (248-297)||(29734810-29734859)
chr7 (256-297)||(46987086-46987127)
chr7 (250-295)||(48980481-48980526)
chr7 (255-295)||(1398419-1398459)
chr7 (249-297)||(16577880-16577928)
chr7 (249-297)||(16587734-16587782)
chr7 (248-296)||(37451258-37451306)
chr7 (253-297)||(40762227-40762271)
[»] chr2 (39 HSPs)
chr2 (89-159)||(36349428-36349498)
chr2 (253-297)||(43117210-43117254)
chr2 (250-297)||(3197099-3197146)
chr2 (250-297)||(12124539-12124586)
chr2 (250-297)||(28277696-28277743)
chr2 (255-297)||(24393737-24393779)
chr2 (255-297)||(28771581-28771623)
chr2 (251-296)||(20517017-20517062)
chr2 (252-297)||(34464429-34464474)
chr2 (249-297)||(9383229-9383277)
chr2 (249-297)||(19179070-19179118)
chr2 (257-297)||(35685081-35685121)
chr2 (249-296)||(15381626-15381673)
chr2 (250-297)||(18231493-18231540)
chr2 (250-297)||(21482539-21482586)
chr2 (250-297)||(39761432-39761479)
chr2 (250-296)||(4238753-4238799)
chr2 (255-297)||(24593375-24593417)
chr2 (251-297)||(40546311-40546357)
chr2 (248-294)||(44526120-44526166)
chr2 (256-297)||(6141220-6141261)
chr2 (251-296)||(10332296-10332341)
chr2 (248-297)||(10735851-10735900)
chr2 (256-297)||(20120741-20120782)
chr2 (250-295)||(27934879-27934924)
chr2 (249-294)||(42778612-42778657)
chr2 (249-297)||(2256964-2257012)
chr2 (255-295)||(7413211-7413251)
chr2 (246-294)||(9752120-9752168)
chr2 (249-297)||(9842222-9842270)
chr2 (253-297)||(20565095-20565139)
chr2 (249-297)||(24592866-24592914)
chr2 (255-295)||(28930960-28931000)
chr2 (257-297)||(31963086-31963126)
chr2 (249-297)||(35820321-35820369)
chr2 (259-295)||(38797289-38797325)
chr2 (257-297)||(40099403-40099443)
chr2 (256-296)||(44488031-44488071)
chr2 (253-297)||(44496720-44496764)
[»] chr8 (24 HSPs)
chr8 (250-297)||(23852905-23852952)
chr8 (251-297)||(8717495-8717541)
chr8 (251-297)||(17704008-17704054)
chr8 (248-296)||(21557425-21557473)
chr8 (250-297)||(6447183-6447230)
chr8 (250-297)||(7553673-7553720)
chr8 (250-297)||(11708980-11709027)
chr8 (250-297)||(13575283-13575330)
chr8 (250-297)||(19778059-19778106)
chr8 (250-297)||(23816784-23816831)
chr8 (250-297)||(27587215-27587262)
chr8 (250-297)||(27750924-27750971)
chr8 (250-297)||(37938489-37938536)
chr8 (250-297)||(39821878-39821925)
chr8 (251-297)||(12714390-12714436)
chr8 (255-297)||(42208489-42208531)
chr8 (248-297)||(6314343-6314392)
chr8 (248-297)||(12910826-12910875)
chr8 (250-295)||(14303159-14303204)
chr8 (256-297)||(30623293-30623334)
chr8 (254-295)||(33620896-33620937)
chr8 (256-296)||(8910002-8910042)
chr8 (249-297)||(13357461-13357509)
chr8 (249-297)||(37015856-37015904)
[»] chr5 (26 HSPs)
chr5 (250-297)||(36321514-36321561)
chr5 (251-297)||(17861974-17862020)
chr5 (250-296)||(28447487-28447533)
chr5 (248-297)||(26590699-26590748)
chr5 (257-297)||(13409429-13409469)
chr5 (253-297)||(16133085-16133129)
chr5 (250-297)||(3445267-3445314)
chr5 (250-297)||(5485180-5485227)
chr5 (250-297)||(6489001-6489048)
chr5 (250-297)||(15889405-15889452)
chr5 (250-297)||(34436845-34436892)
chr5 (248-295)||(37054291-37054338)
chr5 (250-297)||(37932324-37932371)
chr5 (250-297)||(40445977-40446024)
chr5 (250-296)||(1512849-1512895)
chr5 (250-296)||(2249437-2249483)
chr5 (250-295)||(10199013-10199058)
chr5 (255-296)||(21308968-21309009)
chr5 (255-296)||(21316881-21316922)
chr5 (248-297)||(24485691-24485740)
chr5 (250-297)||(4009860-4009908)
chr5 (248-296)||(4432108-4432156)
chr5 (249-297)||(8350663-8350711)
chr5 (250-294)||(13220643-13220687)
chr5 (257-297)||(18147719-18147759)
chr5 (253-297)||(36683490-36683534)
[»] chr3 (26 HSPs)
chr3 (250-297)||(1149089-1149136)
chr3 (250-297)||(16980374-16980421)
chr3 (249-296)||(47099346-47099393)
chr3 (250-297)||(52904163-52904210)
chr3 (249-297)||(18870745-18870793)
chr3 (256-296)||(42269298-42269338)
chr3 (249-297)||(46634575-46634623)
chr3 (257-297)||(54230119-54230159)
chr3 (250-297)||(7868716-7868763)
chr3 (250-297)||(10498715-10498762)
chr3 (250-297)||(10926463-10926510)
chr3 (250-297)||(35191837-35191884)
chr3 (250-297)||(48315044-48315091)
chr3 (255-297)||(8113582-8113624)
chr3 (255-296)||(29334577-29334618)
chr3 (248-297)||(29631178-29631227)
chr3 (249-297)||(2662085-2662133)
chr3 (253-297)||(3755336-3755380)
chr3 (257-297)||(21295545-21295585)
chr3 (256-296)||(22843464-22843504)
chr3 (249-297)||(35863833-35863881)
chr3 (255-295)||(46469276-46469316)
chr3 (248-296)||(48376827-48376875)
chr3 (249-297)||(48796238-48796286)
chr3 (257-297)||(52119377-52119417)
chr3 (256-292)||(55198882-55198918)
[»] scaffold0259 (1 HSPs)
scaffold0259 (250-295)||(19382-19427)
[»] scaffold0154 (1 HSPs)
scaffold0154 (250-297)||(10777-10824)
[»] scaffold0098 (1 HSPs)
scaffold0098 (248-295)||(5417-5464)
[»] scaffold0320 (1 HSPs)
scaffold0320 (256-297)||(15475-15516)
[»] scaffold0045 (2 HSPs)
scaffold0045 (250-295)||(63856-63901)
scaffold0045 (250-295)||(71188-71233)
[»] scaffold0188 (1 HSPs)
scaffold0188 (250-290)||(28140-28180)
[»] scaffold0180 (1 HSPs)
scaffold0180 (253-297)||(17729-17773)
[»] scaffold0118 (1 HSPs)
scaffold0118 (253-297)||(39995-40039)


Alignment Details
Target: chr6 (Bit Score: 120; Significance: 2e-61; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 26 - 211
Target Start/End: Original strand, 10293708 - 10293905
Alignment:
Q  26 aatgtccaaaactgaaaattatttatatggtataaatacaaatggtaaaagggta----------atgcattcacctgtaggtgactctttaaatggtat 115  Q
    |||| |||||| ||||||||| |||||||||||||||| ||||||||||||||||          ||| ||| |||||||||||||||||||||||||||    
T  10293708 aatggccaaaattgaaaattagttatatggtataaatagaaatggtaaaagggtagtgatgtataatgtatttacctgtaggtgactctttaaatggtat 10293807  T
Q  116 aatgtaagtccaggaattcccataagtttcaaaactgtttttggtgtagcttctgcatggaaatagtaatcaaattagcttc--aaaattgcaatttt 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||  ||||||||||||||    
T  10293808 aatgtaagtccaggaattcccataagtttcaaaactgtttttggtgtagcttctgcatggtaatagtaatcaaattaccttcaaaaaattgcaatttt 10293905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 296
Target Start/End: Complemental strand, 22414515 - 22414469
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatg 296  Q
    ||||| |||||||||||||||| |||||||| |||||||||||||||    
T  22414515 gtccttgtgagtttagctcagttagtaaggataatgcataatatatg 22414469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 18256876 - 18256924
Alignment:
Q  249 agtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||||| ||||||||||   |||||||||||||||||||||||    
T  18256876 agtcctcgtgagcttagctcagttgataaggacaatgcataatatatgc 18256924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 297
Target Start/End: Complemental strand, 32193923 - 32193879
Alignment:
Q  253 ctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||||||||||||  ||||| ||||||||||||||||||    
T  32193923 ctcgtgagtttagctcagttggtaagaacaatgcataatatatgc 32193879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 788860 - 788907
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||| ||| ||||||  ||||||||||||||||||||||||    
T  788860 gtcctcgtgagcttatctcagttggtaaggacaatgcataatatatgc 788907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Complemental strand, 7083059 - 7083012
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||| |||||||| |  ||||||||||||||||||||||||    
T  7083059 gtcctcgtgagcttagctcaattggtaaggacaatgcataatatatgc 7083012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Complemental strand, 12333635 - 12333588
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||| |||||||||| |||| ||||||||||||| ||||||    
T  12333635 gtcctcgtgagcttagctcagttagtatggacaatgcataaaatatgc 12333588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 26587386 - 26587433
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||| |||| |||||||||||| |||||| ||||||||||||||||||    
T  26587386 gtccccgtgggtttagctcagttagtaagaacaatgcataatatatgc 26587433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 32053782 - 32053829
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||| ||||||||||  ||| ||||||||||||||||||||    
T  32053782 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatgc 32053829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 295
Target Start/End: Complemental strand, 12336394 - 12336348
Alignment:
Q  249 agtcctcgtgagtttagctcagtcagtaaggacaatgcataatatat 295  Q
    |||||||||||||||| |||||| | || ||||||||||||||||||    
T  12336394 agtcctcgtgagtttaactcagttaatatggacaatgcataatatat 12336348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 297
Target Start/End: Original strand, 20744133 - 20744179
Alignment:
Q  251 tcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||| ||||||||||  ||| ||||||||||||||||||||    
T  20744133 tcctcgtgagcttagctcagttggtatggacaatgcataatatatgc 20744179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 292
Target Start/End: Original strand, 34828300 - 34828342
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataata 292  Q
    ||||||||||||||||||||||  ||| |||||||||||||||    
T  34828300 gtcctcgtgagtttagctcagttggtatggacaatgcataata 34828342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 297
Target Start/End: Original strand, 2473600 - 2473644
Alignment:
Q  253 ctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||| |||||||||| |||| ||||||| ||||||||||||    
T  2473600 ctcgtgaggttagctcagttagtagggacaatacataatatatgc 2473644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 3808186 - 3808138
Alignment:
Q  249 agtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||| |||||  ||| |||||| |||||||||||||||||||||||||    
T  3808186 agtccccgtgaacttaactcagttagtaaggacaatgcataatatatgc 3808138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 5008834 - 5008878
Alignment:
Q  251 tcctcgtgagtttagctcagtcagtaaggacaatgcataatatat 295  Q
    ||||||| | |||||||||||  ||||||||||||||||||||||    
T  5008834 tcctcgtaaatttagctcagttggtaaggacaatgcataatatat 5008878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 297
Target Start/End: Complemental strand, 10780171 - 10780127
Alignment:
Q  253 ctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||| ||||||||||  ||| ||||||||||||||||||||    
T  10780171 ctcgtgagcttagctcagttggtagggacaatgcataatatatgc 10780127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 296
Target Start/End: Original strand, 22576160 - 22576200
Alignment:
Q  256 gtgagtttagctcagtcagtaaggacaatgcataatatatg 296  Q
    ||||||||||||||||  |||||||||||| ||||||||||    
T  22576160 gtgagtttagctcagttggtaaggacaatgaataatatatg 22576200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 297
Target Start/End: Original strand, 24269880 - 24269924
Alignment:
Q  253 ctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||| |||||||||| |||| ||||||||||||| ||||||    
T  24269880 ctcgtgagcttagctcagttagtatggacaatgcataaaatatgc 24269924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 248 - 297
Target Start/End: Original strand, 239799 - 239848
Alignment:
Q  248 aagtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  239799 aagtcctcgtgagtttagctcagttggtaaggacaatgcataatatatgc 239848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 248 - 297
Target Start/End: Complemental strand, 14577576 - 14577527
Alignment:
Q  248 aagtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  14577576 aagtcctcgtgagtttagctcagttggtaaggacaatgcataatatatgc 14577527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 250 - 296
Target Start/End: Original strand, 21465605 - 21465651
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatg 296  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||    
T  21465605 gtcctcgtgagtttaactcagttagtaaggacaatgcataatatatg 21465651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 297
Target Start/End: Original strand, 37921741 - 37921787
Alignment:
Q  251 tcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||    
T  37921741 tcctcctgagtttagctcagttagtaaggacaatgcataatatatgc 37921787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 253 - 297
Target Start/End: Complemental strand, 38812913 - 38812869
Alignment:
Q  253 ctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||    
T  38812913 ctcgtgagtttagctcagtcggtagggacaatgcataatatatgc 38812869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 7230274 - 7230321
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  7230274 gtcctcgtgagcttagctcagttggtaaggacaatgcataatatatgc 7230321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 34247434 - 34247481
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||| ||||||||||||||||  ||||||||||||||||||||||||    
T  34247434 gtccttgtgagtttagctcagttggtaaggacaatgcataatatatgc 34247481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 250 - 295
Target Start/End: Complemental strand, 18915113 - 18915068
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatat 295  Q
    |||| |||||||||||||||||  ||||||||||||||||||||||    
T  18915113 gtccccgtgagtttagctcagttggtaaggacaatgcataatatat 18915068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 297
Target Start/End: Complemental strand, 8027461 - 8027417
Alignment:
Q  253 ctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||||||||||||  ||||||| ||||||||||||||||    
T  8027461 ctcgtgagtttagctcagttggtaaggataatgcataatatatgc 8027417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 297
Target Start/End: Original strand, 12058320 - 12058360
Alignment:
Q  257 tgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  12058320 tgagtttagctcagtcggtaaggataatgcataatatatgc 12058360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 12322666 - 12322714
Alignment:
Q  249 agtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||||| ||||||||||  ||| ||||||||||||||||||||    
T  12322666 agtcctcgtgagcttagctcagttggtacggacaatgcataatatatgc 12322714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 36071136 - 36071184
Alignment:
Q  248 aagtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatg 296  Q
    ||||||| |||||||||| |||||  |||||||||||||||||||||||    
T  36071136 aagtccttgtgagtttaggtcagttggtaaggacaatgcataatatatg 36071184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Complemental strand, 2186400 - 2186353
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||| ||||||||||  ||| ||||||||||||||||||||    
T  2186400 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatgc 2186353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Complemental strand, 10303578 - 10303531
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||| ||||||||||  ||||||||||||||||| ||||||    
T  10303578 gtcctcgtgagcttagctcagttggtaaggacaatgcataaaatatgc 10303531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Complemental strand, 20799461 - 20799414
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||| ||||||||||  ||| ||||||||||||||||||||    
T  20799461 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgc 20799414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Complemental strand, 28435315 - 28435268
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||| ||||||||||||||||  ||| ||||||||||||||||||||    
T  28435315 gtccttgtgagtttagctcagttggtatggacaatgcataatatatgc 28435268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 36203230 - 36203277
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||| ||||||||||   |||||||||||||||||||||||    
T  36203230 gtcctcgtgagcttagctcagttgataaggacaatgcataatatatgc 36203277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 49473639 - 49473686
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||| ||||| ||||  ||||||||||||||||||||||||    
T  49473639 gtcctcgtgagcttagcccagttggtaaggacaatgcataatatatgc 49473686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Complemental strand, 50362206 - 50362159
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||| ||||||||||  ||| ||||||||||||||||||||    
T  50362206 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgc 50362159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Complemental strand, 52270097 - 52270050
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||| ||||||||||  ||| ||||||||||||||||||||    
T  52270097 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatgc 52270050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 297
Target Start/End: Complemental strand, 16304164 - 16304118
Alignment:
Q  251 tcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||| |||||||||||||  ||| ||||||||||||||||||||    
T  16304164 tcctcgtaagtttagctcagttggtatggacaatgcataatatatgc 16304118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 297
Target Start/End: Original strand, 37193244 - 37193290
Alignment:
Q  251 tcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||| |||||||||| |||| |||||||| |||||||||||    
T  37193244 tcctcgtgagcttagctcagttagtatggacaatgtataatatatgc 37193290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 296
Target Start/End: Original strand, 43722759 - 43722805
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatg 296  Q
    ||||||||||||||| ||||||  ||| |||||||||||||||||||    
T  43722759 gtcctcgtgagtttaactcagttggtatggacaatgcataatatatg 43722805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 297
Target Start/End: Original strand, 23809941 - 23809990
Alignment:
Q  248 aagtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||||| ||||||||||  ||| |||||| |||||||||||||    
T  23809941 aagtcctcgtgagcttagctcagttggtatggacaaagcataatatatgc 23809990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 296
Target Start/End: Original strand, 32006495 - 32006540
Alignment:
Q  251 tcctcgtgagtttagctcagtcagtaaggacaatgcataatatatg 296  Q
    |||||||||||||||||||||  ||| ||| |||||||||||||||    
T  32006495 tcctcgtgagtttagctcagttggtagggataatgcataatatatg 32006540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 297
Target Start/End: Original strand, 56204947 - 56204988
Alignment:
Q  256 gtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||| ||||||  ||||||||||||||||||||||||    
T  56204947 gtgagtttaactcagttggtaaggacaatgcataatatatgc 56204988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 257 - 297
Target Start/End: Complemental strand, 22279580 - 22279540
Alignment:
Q  257 tgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||| ||||||||||  ||||||||||||||||||||||||    
T  22279580 tgagcttagctcagttggtaaggacaatgcataatatatgc 22279540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 297
Target Start/End: Original strand, 30380527 - 30380571
Alignment:
Q  253 ctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||||| ||||||  |||||||||||| |||||||||||    
T  30380527 ctcgtgagtttaactcagttggtaaggacaatgtataatatatgc 30380571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 296
Target Start/End: Complemental strand, 34595997 - 34595957
Alignment:
Q  256 gtgagtttagctcagtcagtaaggacaatgcataatatatg 296  Q
    ||||||||| ||||||  |||||||||||||||||||||||    
T  34595997 gtgagtttaactcagttggtaaggacaatgcataatatatg 34595957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 257 - 297
Target Start/End: Complemental strand, 46676558 - 46676518
Alignment:
Q  257 tgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||| ||||||||||  ||||||||||||||||||||||||    
T  46676558 tgagcttagctcagttggtaaggacaatgcataatatatgc 46676518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 248 - 297
Target Start/End: Complemental strand, 31890818 - 31890769
Alignment:
Q  248 aagtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  31890818 aagtcctcgtgagtttagctcagttggtaaggacaatgcataatatatgc 31890769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 1794590 - 1794637
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||| |||||||||| |||| ||||||||||||||||||||    
T  1794590 gtcctcgtgagcttagctcagttagtatggacaatgcataatatatgc 1794637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 297
Target Start/End: Complemental strand, 5279437 - 5279390
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||||||| ||||||| ||| ||||||||||||||||||||    
T  5279437 gtcctcgtgagtttaactcagtcggtatggacaatgcataatatatgc 5279390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 49183167 - 49183214
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||||||    
T  49183167 gtcctcgtgagtttagctcagttggtaaggacaatacataatatatgc 49183214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 297
Target Start/End: Original strand, 34733397 - 34733441
Alignment:
Q  253 ctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||| ||||||||||  ||||||||||||||||||||||||    
T  34733397 ctcgtgagcttagctcagttggtaaggacaatgcataatatatgc 34733441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 44641520 - 44641568
Alignment:
Q  249 agtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||||||||||||||||   || ||||||||||||||||||||    
T  44641520 agtcctcgtgagtttagctcagttgatatggacaatgcataatatatgc 44641568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 295
Target Start/End: Complemental strand, 51127956 - 51127912
Alignment:
Q  251 tcctcgtgagtttagctcagtcagtaaggacaatgcataatatat 295  Q
    ||||||||||||||||||||| | || ||||||||||||||||||    
T  51127956 tcctcgtgagtttagctcagttaatatggacaatgcataatatat 51127912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Complemental strand, 21400090 - 21400043
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||| ||||||||||  ||| ||||||||||||||||||||    
T  21400090 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgc 21400043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 295
Target Start/End: Original strand, 27127216 - 27127263
Alignment:
Q  248 aagtcctcgtgagtttagctcagtcagtaaggacaatgcataatatat 295  Q
    |||||||| |||| |||||||||| |||||||| ||||||||||||||    
T  27127216 aagtcctcatgagcttagctcagttagtaaggataatgcataatatat 27127263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Complemental strand, 27449512 - 27449465
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||| |||||||||| | || ||||||||||||||||||||    
T  27449512 gtcctcgtgagcttagctcagttaatatggacaatgcataatatatgc 27449465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 28032278 - 28032325
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||||||||||| || |||||  ||||||||||||||||||    
T  28032278 gtcctcgtgagtttagctcggttagtaaaaacaatgcataatatatgc 28032325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Complemental strand, 38448933 - 38448886
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||| |||||| ||||||||||  ||||||||||||||||||||||||    
T  38448933 gtccccgtgagcttagctcagttggtaaggacaatgcataatatatgc 38448886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 40693679 - 40693718
Alignment:
Q  249 agtcctcgtgagtttagctcagtcagtaaggacaatgcat 288  Q
    |||||||||||||||||||||||  |||||||||||||||    
T  40693679 agtcctcgtgagtttagctcagttggtaaggacaatgcat 40693718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Complemental strand, 42045439 - 42045392
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||| ||||||||||  ||| ||||||||||||||||||||    
T  42045439 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatgc 42045392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 295
Target Start/End: Complemental strand, 17139585 - 17139539
Alignment:
Q  249 agtcctcgtgagtttagctcagtcagtaaggacaatgcataatatat 295  Q
    |||||||||||| ||||||||||  ||| ||||||||||||||||||    
T  17139585 agtcctcgtgagcttagctcagttggtagggacaatgcataatatat 17139539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 297
Target Start/End: Original strand, 17283950 - 17283992
Alignment:
Q  255 cgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||| ||||||||||  ||||||||||||||||||||||||    
T  17283950 cgtgagcttagctcagttggtaaggacaatgcataatatatgc 17283992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 297
Target Start/End: Complemental strand, 24124892 - 24124850
Alignment:
Q  255 cgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||||||||||   |||||||||||||||||||||||    
T  24124892 cgtgagtttagctcagttgttaaggacaatgcataatatatgc 24124850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 296
Target Start/End: Complemental strand, 40735072 - 40735026
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatg 296  Q
    |||||||| ||||||||||||| |||| ||||||||||||| |||||    
T  40735072 gtcctcgtaagtttagctcagttagtatggacaatgcataaaatatg 40735026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 296
Target Start/End: Complemental strand, 41573336 - 41573290
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatg 296  Q
    ||||||||||||||| ||||||  ||| |||||||||||||||||||    
T  41573336 gtcctcgtgagtttaactcagttggtagggacaatgcataatatatg 41573290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 296
Target Start/End: Original strand, 44243867 - 44243913
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatg 296  Q
    ||||||||||||||||||||||  ||| | |||||||||||||||||    
T  44243867 gtcctcgtgagtttagctcagttggtaggaacaatgcataatatatg 44243913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 297
Target Start/End: Complemental strand, 34521251 - 34521210
Alignment:
Q  256 gtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||||||||  ||| ||||||||||||||||||||    
T  34521251 gtgagtttagctcagttggtatggacaatgcataatatatgc 34521210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 295
Target Start/End: Complemental strand, 41884872 - 41884827
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatat 295  Q
    |||||||||||||||||||||| |||  ||||||| ||||||||||    
T  41884872 gtcctcgtgagtttagctcagttagtttggacaatacataatatat 41884827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 297
Target Start/End: Complemental strand, 48730708 - 48730659
Alignment:
Q  248 aagtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||||| | ||||||||  ||||||||||||||||||| ||||    
T  48730708 aagtcctcgtgagctcagctcagttggtaaggacaatgcataataaatgc 48730659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 297
Target Start/End: Complemental strand, 49875664 - 49875619
Alignment:
Q  252 cctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||| ||| ||||||  ||||||||||||||||||||||||    
T  49875664 cctcgtgagcttaactcagttggtaaggacaatgcataatatatgc 49875619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 24324468 - 24324420
Alignment:
Q  249 agtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||||| |||||||||    |||||||||||||||||||||||    
T  24324468 agtcctcgtgagcttagctcaggtgataaggacaatgcataatatatgc 24324420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 25532966 - 25533014
Alignment:
Q  249 agtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||||| |||| |||||  ||| ||||||||||||||||||||    
T  25532966 agtcctcgtgagcttagttcagttggtatggacaatgcataatatatgc 25533014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 296
Target Start/End: Original strand, 41926822 - 41926862
Alignment:
Q  256 gtgagtttagctcagtcagtaaggacaatgcataatatatg 296  Q
    ||||| ||||||||||  |||||||||||||||||||||||    
T  41926822 gtgagcttagctcagttggtaaggacaatgcataatatatg 41926862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 294
Target Start/End: Complemental strand, 47528514 - 47528470
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatata 294  Q
    |||| |||||| ||||||||||  |||||||||||||||||||||    
T  47528514 gtccccgtgagcttagctcagttggtaaggacaatgcataatata 47528470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 297
Target Start/End: Complemental strand, 33473588 - 33473541
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  33473588 gtcctcgtgagtttagttcagtcagcaaggacaatgcataatatatgc 33473541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 297
Target Start/End: Complemental strand, 3533069 - 3533028
Alignment:
Q  256 gtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  3533069 gtgagtttagctcagttagtaaggacaatgcataatatatgc 3533028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 297
Target Start/End: Original strand, 3953436 - 3953482
Alignment:
Q  251 tcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  3953436 tcctcgtgagcttagctcagtcggtatggacaatgcataatatatgc 3953482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 248 - 297
Target Start/End: Original strand, 35763697 - 35763746
Alignment:
Q  248 aagtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||||| ||| ||||||  ||||||||||||||||||||||||    
T  35763697 aagtcctcgtgagcttaactcagttcgtaaggacaatgcataatatatgc 35763746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 252 - 297
Target Start/End: Complemental strand, 44558839 - 44558794
Alignment:
Q  252 cctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||||||||||||  ||| ||||||||||||||||||||    
T  44558839 cctcgtgagtttagctcagttggtatggacaatgcataatatatgc 44558794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 10244720 - 10244768
Alignment:
Q  249 agtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||||| ||||||||||  ||| ||||||||||||||||||||    
T  10244720 agtcctcgtgagcttagctcagttggtatggacaatgcataatatatgc 10244768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 39801699 - 39801747
Alignment:
Q  249 agtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||||| ||||||||||  ||| ||||||||||||||||||||    
T  39801699 agtcctcgtgagcttagctcagttggtatggacaatgcataatatatgc 39801747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 297
Target Start/End: Original strand, 3830058 - 3830109
Alignment:
Q  246 tgaagtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||||||  ||||||||||  ||| ||||||||||||||||||||    
T  3830058 tgaagtcctcgtgaacttagctcagtttgtagggacaatgcataatatatgc 3830109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 295
Target Start/End: Original strand, 5352321 - 5352368
Alignment:
Q  248 aagtcctcgtgagtttagctcagtcagtaaggacaatgcataatatat 295  Q
    ||||||||||||| ||||||||||  ||||||||||| ||||||||||    
T  5352321 aagtcctcgtgagcttagctcagttggtaaggacaatacataatatat 5352368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Complemental strand, 20085825 - 20085779
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||||||| ||||||| |||| |||||||||||||||||||    
T  20085825 gtcctcgtgagtttaactcagtcggtaa-gacaatgcataatatatgc 20085779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 30857242 - 30857289
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||||||||||| |||  ||| ||||||||||||||||||||    
T  30857242 gtcctcgtgagtttagcttagttggtatggacaatgcataatatatgc 30857289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 37930038 - 37930085
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||| ||| ||||||  ||||||||||||||||||||||||    
T  37930038 gtcctcgtgagcttatctcagttggtaaggacaatgcataatatatgc 37930085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Complemental strand, 40752906 - 40752859
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||| |||||||||| |||| ||||||| ||||||||||||    
T  40752906 gtcctcgtgagcttagctcagttagtatggacaatacataatatatgc 40752859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 297
Target Start/End: Original strand, 4340126 - 4340168
Alignment:
Q  255 cgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||| ||||||||||  ||||||||||||||||||||||||    
T  4340126 cgtgagattagctcagttggtaaggacaatgcataatatatgc 4340168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 295
Target Start/End: Original strand, 5526718 - 5526764
Alignment:
Q  249 agtcctcgtgagtttagctcagtcagtaaggacaatgcataatatat 295  Q
    |||||||||||| ||||||||||  ||| ||||||||||||||||||    
T  5526718 agtcctcgtgagcttagctcagttggtatggacaatgcataatatat 5526764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 296
Target Start/End: Original strand, 8227343 - 8227389
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatg 296  Q
    |||| |||||||||||||||||   ||||||||||||||||||||||    
T  8227343 gtccccgtgagtttagctcagttgataaggacaatgcataatatatg 8227389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 296
Target Start/End: Original strand, 20205816 - 20205862
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatg 296  Q
    |||||||| |||||||||||||  ||| |||||||||||||||||||    
T  20205816 gtcctcgtaagtttagctcagttggtatggacaatgcataatatatg 20205862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 292
Target Start/End: Original strand, 28703502 - 28703544
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataata 292  Q
    ||||||||||||||||||||||  |||| ||||||||||||||    
T  28703502 gtcctcgtgagtttagctcagttggtaaagacaatgcataata 28703544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 297
Target Start/End: Original strand, 8615023 - 8615064
Alignment:
Q  256 gtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||| ||||||||||  ||||||||||||||||||||||||    
T  8615023 gtgagcttagctcagttggtaaggacaatgcataatatatgc 8615064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 297
Target Start/End: Complemental strand, 21050283 - 21050242
Alignment:
Q  256 gtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||| ||||||||||  ||||||||||||||||||||||||    
T  21050283 gtgagcttagctcagttggtaaggacaatgcataatatatgc 21050242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 295
Target Start/End: Complemental strand, 21099840 - 21099795
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatat 295  Q
    |||||||||| |||||||||||  ||| ||||||||||||||||||    
T  21099840 gtcctcgtgaatttagctcagttggtatggacaatgcataatatat 21099795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 297
Target Start/End: Original strand, 24991781 - 24991822
Alignment:
Q  256 gtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||| ||||||||||  ||||||||||||||||||||||||    
T  24991781 gtgagcttagctcagttggtaaggacaatgcataatatatgc 24991822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 297
Target Start/End: Original strand, 25246767 - 25246812
Alignment:
Q  252 cctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||||||||||||   ||| |||||||||||||||||||    
T  25246767 cctcgtgagtttagctcagttgataaagacaatgcataatatatgc 25246812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 297
Target Start/End: Complemental strand, 29734859 - 29734810
Alignment:
Q  248 aagtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||||||||||||||||||  ||   ||||||||||||||||||    
T  29734859 aagtcctcgtgagtttagctcagtcgatagaaacaatgcataatatatgc 29734810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 297
Target Start/End: Original strand, 46987086 - 46987127
Alignment:
Q  256 gtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||| ||||||||||  ||||||||||||||||||||||||    
T  46987086 gtgagcttagctcagttggtaaggacaatgcataatatatgc 46987127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 295
Target Start/End: Original strand, 48980481 - 48980526
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatat 295  Q
    ||||||||||| ||||||||||  ||| ||||||||||||||||||    
T  48980481 gtcctcgtgagcttagctcagttggtatggacaatgcataatatat 48980526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 295
Target Start/End: Complemental strand, 1398459 - 1398419
Alignment:
Q  255 cgtgagtttagctcagtcagtaaggacaatgcataatatat 295  Q
    |||||| ||||||||||  ||||||||||||||||||||||    
T  1398459 cgtgagcttagctcagttggtaaggacaatgcataatatat 1398419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 16577928 - 16577880
Alignment:
Q  249 agtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||| ||||||||||||  ||| ||||||| ||||||||||||    
T  16577928 agtcctcgtgggtttagctcagttggtagggacaatacataatatatgc 16577880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 16587734 - 16587782
Alignment:
Q  249 agtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||| ||||||||||||  ||| ||||||| ||||||||||||    
T  16587734 agtcctcgtgggtttagctcagttggtagggacaatacataatatatgc 16587782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 37451306 - 37451258
Alignment:
Q  248 aagtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatg 296  Q
    |||||| |||||||||||||||||   |||||| |||||||||||||||    
T  37451306 aagtccccgtgagtttagctcagttgataaggataatgcataatatatg 37451258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 297
Target Start/End: Complemental strand, 40762271 - 40762227
Alignment:
Q  253 ctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||| |||||||||   ||||||||||||||||||||||||    
T  40762271 ctcgtgagcttagctcagatggtaaggacaatgcataatatatgc 40762227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 36349428 - 36349498
Alignment:
Q  89 acctgtaggtgactctttaaatggtataatgtaagtccaggaattcccataagtttcaaaactgtttttgg 159  Q
    ||||| || |||||||||||||||||||| ||||| || ||||||||||| |||||||  |||||||||||    
T  36349428 acctgaagatgactctttaaatggtataaggtaagccctggaattcccatgagtttcattactgtttttgg 36349498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 253 - 297
Target Start/End: Complemental strand, 43117254 - 43117210
Alignment:
Q  253 ctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||||||||||||  ||||||||||||||||||||||||    
T  43117254 ctcgtgagtttagctcagttggtaaggacaatgcataatatatgc 43117210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 297
Target Start/End: Complemental strand, 3197146 - 3197099
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||||||||||||||  ||| ||||||||||||||||||||    
T  3197146 gtcctcgtgagtttagctcagttggtagggacaatgcataatatatgc 3197099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 12124539 - 12124586
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||| |||||||||||||||||  ||||||||||||||||||||||||    
T  12124539 gtccccgtgagtttagctcagttggtaaggacaatgcataatatatgc 12124586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 297
Target Start/End: Complemental strand, 28277743 - 28277696
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||||||||||| |||  ||||||||||||||||||||||||    
T  28277743 gtcctcgtgagtttagcttagttggtaaggacaatgcataatatatgc 28277696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 297
Target Start/End: Original strand, 24393737 - 24393779
Alignment:
Q  255 cgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||||||||| ||||||||||||||||||| |||||    
T  24393737 cgtgagtttagctcagttagtaaggacaatgcataatgtatgc 24393779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 297
Target Start/End: Original strand, 28771581 - 28771623
Alignment:
Q  255 cgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  28771581 cgtgagtttagctcagttggtaaggacaatgcataatatatgc 28771623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 296
Target Start/End: Original strand, 20517017 - 20517062
Alignment:
Q  251 tcctcgtgagtttagctcagtcagtaaggacaatgcataatatatg 296  Q
    |||||||||||||||||||||  ||||| |||||||||||||||||    
T  20517017 tcctcgtgagtttagctcagttggtaagaacaatgcataatatatg 20517062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 252 - 297
Target Start/End: Complemental strand, 34464474 - 34464429
Alignment:
Q  252 cctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||||||||||||  ||| ||||||||||||||||||||    
T  34464474 cctcgtgagtttagctcagttggtatggacaatgcataatatatgc 34464429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 9383277 - 9383229
Alignment:
Q  249 agtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||||| ||||||||||  ||| ||||||||||||||||||||    
T  9383277 agtcctcgtgagcttagctcagttggtatggacaatgcataatatatgc 9383229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 19179118 - 19179070
Alignment:
Q  249 agtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||| |||||| ||||||||||  ||||||||||||||||||||||||    
T  19179118 agtccccgtgagcttagctcagttggtaaggacaatgcataatatatgc 19179070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 297
Target Start/End: Complemental strand, 35685121 - 35685081
Alignment:
Q  257 tgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  35685121 tgagtttagctcagttggtaaggacaatgcataatatatgc 35685081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 15381626 - 15381673
Alignment:
Q  249 agtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatg 296  Q
    |||||||||||| |||||||||| |||| ||||||| |||||||||||    
T  15381626 agtcctcgtgagcttagctcagttagtagggacaatacataatatatg 15381673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Complemental strand, 18231540 - 18231493
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||| |||||| ||||||||||  ||||||||||||||||||||||||    
T  18231540 gtccccgtgagcttagctcagttggtaaggacaatgcataatatatgc 18231493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Complemental strand, 21482586 - 21482539
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||||||||||||||  ||||||| |||| |||||||||||    
T  21482586 gtcctcgtgagtttagctcagttggtaaggataatgtataatatatgc 21482539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 39761432 - 39761479
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||| |||||||||||||||||   |||||||||||||||||||||||    
T  39761432 gtccccgtgagtttagctcagttgataaggacaatgcataatatatgc 39761479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 296
Target Start/End: Original strand, 4238753 - 4238799
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatg 296  Q
    ||||| ||||| |||||||||| |||| |||||||||||||||||||    
T  4238753 gtccttgtgagcttagctcagttagtatggacaatgcataatatatg 4238799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 297
Target Start/End: Original strand, 24593375 - 24593417
Alignment:
Q  255 cgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||| ||||||||||  ||||||||||||||||||||||||    
T  24593375 cgtgagcttagctcagttggtaaggacaatgcataatatatgc 24593417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 297
Target Start/End: Original strand, 40546311 - 40546357
Alignment:
Q  251 tcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||| |||||||||| | |||| ||||||||||||||||||    
T  40546311 tcctcgtgagcttagctcagttaataagaacaatgcataatatatgc 40546357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 294
Target Start/End: Original strand, 44526120 - 44526166
Alignment:
Q  248 aagtcctcgtgagtttagctcagtcagtaaggacaatgcataatata 294  Q
    ||||||||||||| ||||||||||  ||| |||||||||||||||||    
T  44526120 aagtcctcgtgagcttagctcagttggtatggacaatgcataatata 44526166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 297
Target Start/End: Original strand, 6141220 - 6141261
Alignment:
Q  256 gtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||| ||||||  ||||||||||||||||||||||||    
T  6141220 gtgagtttatctcagttggtaaggacaatgcataatatatgc 6141261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 296
Target Start/End: Complemental strand, 10332341 - 10332296
Alignment:
Q  251 tcctcgtgagtttagctcagtcagtaaggacaatgcataatatatg 296  Q
    |||||||||| ||||||||||   ||||||||||||||||||||||    
T  10332341 tcctcgtgagcttagctcagttgataaggacaatgcataatatatg 10332296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 297
Target Start/End: Complemental strand, 10735900 - 10735851
Alignment:
Q  248 aagtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||||| ||||||||||  ||| |||| |||||||||||||||    
T  10735900 aagtcctcgtgagcttagctcagttggtagggacgatgcataatatatgc 10735851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 297
Target Start/End: Complemental strand, 20120782 - 20120741
Alignment:
Q  256 gtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||| ||||||||||  ||||||||||||||||||||||||    
T  20120782 gtgagcttagctcagttggtaaggacaatgcataatatatgc 20120741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 295
Target Start/End: Complemental strand, 27934924 - 27934879
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatat 295  Q
    ||||||||||| ||||||||||  ||||||||||| ||||||||||    
T  27934924 gtcctcgtgagcttagctcagttggtaaggacaatacataatatat 27934879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 294
Target Start/End: Original strand, 42778612 - 42778657
Alignment:
Q  249 agtcctcgtgagtttagctcagtcagtaaggacaatgcataatata 294  Q
    ||||||| |||||||| ||||||  |||||||||||||||||||||    
T  42778612 agtcctcatgagtttaactcagttggtaaggacaatgcataatata 42778657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 2256964 - 2257012
Alignment:
Q  249 agtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||||| ||| ||||||  ||| ||||||||||||||||||||    
T  2256964 agtcctcgtgagcttaactcagttggtatggacaatgcataatatatgc 2257012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 295
Target Start/End: Complemental strand, 7413251 - 7413211
Alignment:
Q  255 cgtgagtttagctcagtcagtaaggacaatgcataatatat 295  Q
    |||||| ||||||||||  ||||||||||||||||||||||    
T  7413251 cgtgagcttagctcagttggtaaggacaatgcataatatat 7413211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 294
Target Start/End: Complemental strand, 9752168 - 9752120
Alignment:
Q  246 tgaagtcctcgtgagtttagctcagtcagtaaggacaatgcataatata 294  Q
    |||| ||||||||||  |||||||||  |||||||||||||||||||||    
T  9752168 tgaaatcctcgtgagcatagctcagttggtaaggacaatgcataatata 9752120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 9842270 - 9842222
Alignment:
Q  249 agtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||||| ||||||||||  ||| ||||||||||||| ||||||    
T  9842270 agtcctcgtgagcttagctcagttggtagggacaatgcataaaatatgc 9842222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 297
Target Start/End: Complemental strand, 20565139 - 20565095
Alignment:
Q  253 ctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||| ||||||||||  ||| ||||||||||||||||||||    
T  20565139 ctcgtgagcttagctcagttggtagggacaatgcataatatatgc 20565095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 24592914 - 24592866
Alignment:
Q  249 agtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||||  ||||||||||  ||| ||||||||||||||||||||    
T  24592914 agtcctcgtgaacttagctcagttggtagggacaatgcataatatatgc 24592866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 295
Target Start/End: Complemental strand, 28931000 - 28930960
Alignment:
Q  255 cgtgagtttagctcagtcagtaaggacaatgcataatatat 295  Q
    |||||| |||||||||  |||||||||||||||||||||||    
T  28931000 cgtgagcttagctcagctagtaaggacaatgcataatatat 28930960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 257 - 297
Target Start/End: Complemental strand, 31963126 - 31963086
Alignment:
Q  257 tgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||| |||||||||  ||||||||||||||||||||||||    
T  31963126 tgagtatagctcagttggtaaggacaatgcataatatatgc 31963086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 35820369 - 35820321
Alignment:
Q  249 agtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||||| ||||||||||  ||| ||||||||||||||| ||||    
T  35820369 agtcctcgtgagcttagctcagttggtagggacaatgcataatacatgc 35820321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 38797289 - 38797325
Alignment:
Q  259 agtttagctcagtcagtaaggacaatgcataatatat 295  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  38797289 agtttagctcagttagtaaggacaatgaataatatat 38797325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 257 - 297
Target Start/End: Complemental strand, 40099443 - 40099403
Alignment:
Q  257 tgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||| ||||||||||  ||||||||||||||||||||||||    
T  40099443 tgagcttagctcagttggtaaggacaatgcataatatatgc 40099403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 296
Target Start/End: Complemental strand, 44488071 - 44488031
Alignment:
Q  256 gtgagtttagctcagtcagtaaggacaatgcataatatatg 296  Q
    |||||||||| |||||  |||||||||||||||||||||||    
T  44488071 gtgagtttagttcagttggtaaggacaatgcataatatatg 44488031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 297
Target Start/End: Complemental strand, 44496764 - 44496720
Alignment:
Q  253 ctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||| ||||||||||  ||||||||||| ||||||||||||    
T  44496764 ctcgtgagcttagctcagttggtaaggacaatacataatatatgc 44496720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000003; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 23852905 - 23852952
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  23852905 gtcctcgtgagcttagctcagtcggtatggacaatgcataatatatgc 23852952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 297
Target Start/End: Complemental strand, 8717541 - 8717495
Alignment:
Q  251 tcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||||||||||||||  ||| ||||||||||||||||||||    
T  8717541 tcctcgtgagtttagctcagttggtatggacaatgcataatatatgc 8717495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 297
Target Start/End: Original strand, 17704008 - 17704054
Alignment:
Q  251 tcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||| ||||||||||  ||||||||||||||||||||||||    
T  17704008 tcctcgtgagcttagctcagttggtaaggacaatgcataatatatgc 17704054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 21557425 - 21557473
Alignment:
Q  248 aagtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatg 296  Q
    ||||||||||||| ||| |||||| |||| |||||||||||||||||||    
T  21557425 aagtcctcgtgagcttaactcagttagtatggacaatgcataatatatg 21557473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 6447183 - 6447230
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||||||| ||||||  ||| ||||||||||||||||||||    
T  6447183 gtcctcgtgagtttaactcagttggtatggacaatgcataatatatgc 6447230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 7553673 - 7553720
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||||||| ||||||  ||| ||||||||||||||||||||    
T  7553673 gtcctcgtgagtttaactcagttggtagggacaatgcataatatatgc 7553720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 11708980 - 11709027
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||| ||||||||||  ||| ||||||||||||||||||||    
T  11708980 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgc 11709027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 13575283 - 13575330
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||||||||||||||  ||| ||||||||||||| ||||||    
T  13575283 gtcctcgtgagtttagctcagttggtagggacaatgcataacatatgc 13575330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 19778059 - 19778106
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||| |||||| ||||||||||  ||||||||||||||||||||||||    
T  19778059 gtccccgtgagcttagctcagttggtaaggacaatgcataatatatgc 19778106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 23816784 - 23816831
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||| ||||||||||  ||||||| ||||||||||||||||    
T  23816784 gtcctcgtgagcttagctcagttggtaaggataatgcataatatatgc 23816831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 27587215 - 27587262
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||| ||||||||||  ||||||||||||||| ||||||||    
T  27587215 gtcctcgtgagcttagctcagttggtaaggacaatgcatgatatatgc 27587262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Complemental strand, 27750971 - 27750924
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||| ||||||||||  ||||||||| ||||||||||||||    
T  27750971 gtcctcgtgagcttagctcagttggtaaggacagtgcataatatatgc 27750924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 37938489 - 37938536
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||||||||||||||  ||| ||| ||||||||||||||||    
T  37938489 gtcctcgtgagtttagctcagttggtatggataatgcataatatatgc 37938536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 39821878 - 39821925
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||| ||||||||||  ||| ||||||||||||||||||||    
T  39821878 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgc 39821925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 297
Target Start/End: Complemental strand, 12714436 - 12714390
Alignment:
Q  251 tcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||||||||||||||  | | ||||||||||||||||||||    
T  12714436 tcctcgtgagtttagctcagttggaagggacaatgcataatatatgc 12714390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 297
Target Start/End: Complemental strand, 42208531 - 42208489
Alignment:
Q  255 cgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||| |||||||||||  ||||||||||||||||||||||||    
T  42208531 cgtgaatttagctcagttggtaaggacaatgcataatatatgc 42208489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 297
Target Start/End: Complemental strand, 6314392 - 6314343
Alignment:
Q  248 aagtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||||| ||||||||||   |||||||||||||||| ||||||    
T  6314392 aagtcctcgtgagcttagctcagttgataaggacaatgcataaaatatgc 6314343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 297
Target Start/End: Complemental strand, 12910875 - 12910826
Alignment:
Q  248 aagtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||| ||||| ||||||||||  ||| ||||||||||||||||||||    
T  12910875 aagtccttgtgagattagctcagttggtatggacaatgcataatatatgc 12910826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 295
Target Start/End: Original strand, 14303159 - 14303204
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatat 295  Q
    ||||||||||||||||||||||  ||| |||||||| |||||||||    
T  14303159 gtcctcgtgagtttagctcagttggtatggacaatgtataatatat 14303204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 297
Target Start/End: Original strand, 30623293 - 30623334
Alignment:
Q  256 gtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||| ||||||||||  ||||||||||||||||||||||||    
T  30623293 gtgagcttagctcagttggtaaggacaatgcataatatatgc 30623334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 295
Target Start/End: Original strand, 33620896 - 33620937
Alignment:
Q  254 tcgtgagtttagctcagtcagtaaggacaatgcataatatat 295  Q
    ||||||||||| |||||| |||| ||||||||||||||||||    
T  33620896 tcgtgagtttaactcagttagtatggacaatgcataatatat 33620937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 296
Target Start/End: Complemental strand, 8910042 - 8910002
Alignment:
Q  256 gtgagtttagctcagtcagtaaggacaatgcataatatatg 296  Q
    ||||| ||||||||||  |||||||||||||||||||||||    
T  8910042 gtgagcttagctcagttggtaaggacaatgcataatatatg 8910002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 13357509 - 13357461
Alignment:
Q  249 agtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||||| ||| ||||||  ||| ||||||||||||||||||||    
T  13357509 agtcctcgtgagcttaactcagttggtatggacaatgcataatatatgc 13357461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 37015904 - 37015856
Alignment:
Q  249 agtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||||| ||||||||||  |||  |||||||||||||||||||    
T  37015904 agtcctcgtgagcttagctcagttggtagagacaatgcataatatatgc 37015856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000003; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 297
Target Start/End: Complemental strand, 36321561 - 36321514
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  36321561 gtcctcgtgagcttagctcagttggtaaggacaatgcataatatatgc 36321514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 297
Target Start/End: Original strand, 17861974 - 17862020
Alignment:
Q  251 tcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||||||||||||||  ||| ||||||||||||||||||||    
T  17861974 tcctcgtgagtttagctcagttggtagggacaatgcataatatatgc 17862020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 296
Target Start/End: Original strand, 28447487 - 28447533
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatg 296  Q
    ||||||||||||||| |||||| |||| |||||||||||||||||||    
T  28447487 gtcctcgtgagtttaactcagttagtagggacaatgcataatatatg 28447533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 248 - 297
Target Start/End: Original strand, 26590699 - 26590748
Alignment:
Q  248 aagtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||| ||||||||||||||| ||| || ||||||||||||||||||||||    
T  26590699 aagttctcgtgagtttagcttagttagcaaggacaatgcataatatatgc 26590748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 297
Target Start/End: Original strand, 13409429 - 13409469
Alignment:
Q  257 tgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||||||| ||||| |||||||||||||||||||    
T  13409429 tgagtttagctcagttagtaaagacaatgcataatatatgc 13409469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 297
Target Start/End: Complemental strand, 16133129 - 16133085
Alignment:
Q  253 ctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||| ||||||||||  ||||||||||||||||||||||||    
T  16133129 ctcgtgagcttagctcagttggtaaggacaatgcataatatatgc 16133085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Complemental strand, 3445314 - 3445267
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||| ||||||||||  |||||||||||||||||| |||||    
T  3445314 gtcctcgtgagcttagctcagttggtaaggacaatgcataatgtatgc 3445267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 5485180 - 5485227
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||| ||||||||||  ||| ||||||||||||||||||||    
T  5485180 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgc 5485227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 6489001 - 6489048
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||| ||||||||||  ||| ||||||||||||||||||||    
T  6489001 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgc 6489048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 15889405 - 15889452
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||| ||||||||||  ||| ||||||||||||||||||||    
T  15889405 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgc 15889452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 34436845 - 34436892
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||| ||||||||||  ||| ||||||||||||||||||||    
T  34436845 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgc 34436892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 295
Target Start/End: Complemental strand, 37054338 - 37054291
Alignment:
Q  248 aagtcctcgtgagtttagctcagtcagtaaggacaatgcataatatat 295  Q
    |||||||| |||||||||||||||  ||| ||||||||||||||||||    
T  37054338 aagtcctcatgagtttagctcagttggtagggacaatgcataatatat 37054291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 37932324 - 37932371
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||| ||||||||||  ||| ||||||||||||||||||||    
T  37932324 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatgc 37932371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 40445977 - 40446024
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||||||| ||||||   |||||||||||||||||||||||    
T  40445977 gtcctcgtgagtttaactcagttgataaggacaatgcataatatatgc 40446024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 296
Target Start/End: Original strand, 1512849 - 1512895
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatg 296  Q
    ||||||||||| ||| |||||| |||| |||||||||||||||||||    
T  1512849 gtcctcgtgagcttaactcagttagtagggacaatgcataatatatg 1512895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 296
Target Start/End: Complemental strand, 2249483 - 2249437
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatg 296  Q
    ||||||||||| ||| |||||| |||||||||||| |||||||||||    
T  2249483 gtcctcgtgagcttaactcagttagtaaggacaatacataatatatg 2249437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 295
Target Start/End: Original strand, 10199013 - 10199058
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatat 295  Q
    ||||||||||| ||||||||||  ||| ||||||||||||||||||    
T  10199013 gtcctcgtgagcttagctcagttggtatggacaatgcataatatat 10199058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 296
Target Start/End: Original strand, 21308968 - 21309009
Alignment:
Q  255 cgtgagtttagctcagtcagtaaggacaatgcataatatatg 296  Q
    |||||||||| ||||||  |||||||||||||||||||||||    
T  21308968 cgtgagtttaactcagttggtaaggacaatgcataatatatg 21309009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 296
Target Start/End: Original strand, 21316881 - 21316922
Alignment:
Q  255 cgtgagtttagctcagtcagtaaggacaatgcataatatatg 296  Q
    |||||||||| ||||||  |||||||||||||||||||||||    
T  21316881 cgtgagtttaactcagttggtaaggacaatgcataatatatg 21316922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 297
Target Start/End: Original strand, 24485691 - 24485740
Alignment:
Q  248 aagtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||||| |||||| |||  ||| ||||||||||||||||||||    
T  24485691 aagtcctcgtgagcttagcttagttggtatggacaatgcataatatatgc 24485740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 4009860 - 4009908
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgca-taatatatgc 297  Q
    ||||||||||| ||||||||||  |||||||||||||| ||||||||||    
T  4009860 gtcctcgtgagcttagctcagttggtaaggacaatgcattaatatatgc 4009908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 4432108 - 4432156
Alignment:
Q  248 aagtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatg 296  Q
    |||||||||| |||||| ||||||   ||||||||||||||||||||||    
T  4432108 aagtcctcgtaagtttaactcagttgataaggacaatgcataatatatg 4432156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 8350663 - 8350711
Alignment:
Q  249 agtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||||||||| ||||||  | | ||||||||||||||||||||    
T  8350663 agtcctcgtgagtttaactcagttggcatggacaatgcataatatatgc 8350711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 294
Target Start/End: Complemental strand, 13220687 - 13220643
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatata 294  Q
    ||||||||||| ||||||||||  |||||||| ||||||||||||    
T  13220687 gtcctcgtgagcttagctcagttggtaaggacgatgcataatata 13220643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 257 - 297
Target Start/End: Original strand, 18147719 - 18147759
Alignment:
Q  257 tgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||||||||   |||||||||||||||||||||||    
T  18147719 tgagtttagctcagttgataaggacaatgcataatatatgc 18147759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 297
Target Start/End: Complemental strand, 36683534 - 36683490
Alignment:
Q  253 ctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||||||| |   |||||||||||||||||||||||||    
T  36683534 ctcgtgagtttagctaaaatagtaaggacaatgcataatatatgc 36683490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000003; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 297
Target Start/End: Complemental strand, 1149136 - 1149089
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  1149136 gtcctcgtgagcttagctcagttggtaaggacaatgcataatatatgc 1149089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 297
Target Start/End: Complemental strand, 16980421 - 16980374
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  16980421 gtcctcgtgagcttagctcagttggtaaggacaatgcataatatatgc 16980374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 47099346 - 47099393
Alignment:
Q  249 agtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatg 296  Q
    ||||||||||||||||||||||| | ||| ||||||||||||||||||    
T  47099346 agtcctcgtgagtttagctcagttattaacgacaatgcataatatatg 47099393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 297
Target Start/End: Complemental strand, 52904210 - 52904163
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  52904210 gtcctcgtgaggttagctcagttggtaaggacaatgcataatatatgc 52904163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 18870793 - 18870745
Alignment:
Q  249 agtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||||| ||||||||||  ||| ||||||||||||||||||||    
T  18870793 agtcctcgtgagcttagctcagttggtagggacaatgcataatatatgc 18870745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 296
Target Start/End: Original strand, 42269298 - 42269338
Alignment:
Q  256 gtgagtttagctcagtcagtaaggacaatgcataatatatg 296  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  42269298 gtgagtttagctcagttagtatggacaatgcataatatatg 42269338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 46634623 - 46634575
Alignment:
Q  249 agtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||||| ||| |||||  |||||||||||||||||||||||||    
T  46634623 agtcctcgtgagcttaactcagatagtaaggacaatgcataatatatgc 46634575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 297
Target Start/End: Complemental strand, 54230159 - 54230119
Alignment:
Q  257 tgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  54230159 tgagtttagctcagttggtaaggacaatgcataatatatgc 54230119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 7868716 - 7868763
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||| ||||||||||  ||||| ||||||||||||||||||    
T  7868716 gtcctcgtgagcttagctcagttggtaagaacaatgcataatatatgc 7868763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Complemental strand, 10498762 - 10498715
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||| ||||||||||  ||| ||||||||||||||||||||    
T  10498762 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatgc 10498715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 10926463 - 10926510
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||| || ||||||||||  ||||||||||||||||||||||||    
T  10926463 gtcctcgtaagcttagctcagttggtaaggacaatgcataatatatgc 10926510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Complemental strand, 35191884 - 35191837
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||| | ||||||||||  ||||||||||||||||||||||||    
T  35191884 gtcctcgtgcgcttagctcagttggtaaggacaatgcataatatatgc 35191837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Complemental strand, 48315091 - 48315044
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||||| ||||||||||  ||||||| ||||||||||||||||    
T  48315091 gtcctcgtgagcttagctcagttggtaaggataatgcataatatatgc 48315044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 297
Target Start/End: Complemental strand, 8113624 - 8113582
Alignment:
Q  255 cgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||| ||||||||||  ||||||||||||||||||||||||    
T  8113624 cgtgagcttagctcagttggtaaggacaatgcataatatatgc 8113582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 296
Target Start/End: Original strand, 29334577 - 29334618
Alignment:
Q  255 cgtgagtttagctcagtcagtaaggacaatgcataatatatg 296  Q
    |||||| |||| ||||| ||||||||||||||||||||||||    
T  29334577 cgtgagcttagatcagttagtaaggacaatgcataatatatg 29334618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 297
Target Start/End: Original strand, 29631178 - 29631227
Alignment:
Q  248 aagtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||| |||| ||||||||||  ||| ||||||||||||||||||||    
T  29631178 aagtcctcatgagcttagctcagttggtatggacaatgcataatatatgc 29631227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 2662085 - 2662133
Alignment:
Q  249 agtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||| | |||||||||||||  |||| |||||||||||||||||||    
T  2662085 agtcctcataagtttagctcagttggtaaagacaatgcataatatatgc 2662133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 297
Target Start/End: Original strand, 3755336 - 3755380
Alignment:
Q  253 ctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||||||||| ||  ||| ||||||||||||||||||||    
T  3755336 ctcgtgagtttagctcggttggtagggacaatgcataatatatgc 3755380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 257 - 297
Target Start/End: Complemental strand, 21295585 - 21295545
Alignment:
Q  257 tgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||||||| | |||||||||||| |||||||||||    
T  21295585 tgagtttagctcagccggtaaggacaatgtataatatatgc 21295545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 296
Target Start/End: Original strand, 22843464 - 22843504
Alignment:
Q  256 gtgagtttagctcagtcagtaaggacaatgcataatatatg 296  Q
    ||||| |||||||||| ||||| ||||||||||||||||||    
T  22843464 gtgagcttagctcagttagtaaagacaatgcataatatatg 22843504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 35863881 - 35863833
Alignment:
Q  249 agtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    ||||||||| || ||||||||||  ||||||||||| ||||||||||||    
T  35863881 agtcctcgtaagcttagctcagttggtaaggacaatacataatatatgc 35863833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 295
Target Start/End: Original strand, 46469276 - 46469316
Alignment:
Q  255 cgtgagtttagctcagtcagtaaggacaatgcataatatat 295  Q
    |||||| ||||||||||  ||||||||||||||||||||||    
T  46469276 cgtgagcttagctcagttggtaaggacaatgcataatatat 46469316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 48376827 - 48376875
Alignment:
Q  248 aagtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatg 296  Q
    ||||||||||||| ||||||||||  |||| || |||||||||||||||    
T  48376827 aagtcctcgtgagcttagctcagttggtaaagataatgcataatatatg 48376875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 48796286 - 48796238
Alignment:
Q  249 agtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||||| |||||||||| |||  ||||||||||||| ||||||    
T  48796286 agtcctcgtgagcttagctcagttagtttggacaatgcataagatatgc 48796238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 257 - 297
Target Start/End: Original strand, 52119377 - 52119417
Alignment:
Q  257 tgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||| ||||||||||  ||||||||||||||||||||||||    
T  52119377 tgagcttagctcagttggtaaggacaatgcataatatatgc 52119417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 292
Target Start/End: Original strand, 55198882 - 55198918
Alignment:
Q  256 gtgagtttagctcagtcagtaaggacaatgcataata 292  Q
    ||||||||||||||||  |||||||||||||||||||    
T  55198882 gtgagtttagctcagttggtaaggacaatgcataata 55198918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 250 - 295
Target Start/End: Original strand, 19382 - 19427
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatat 295  Q
    |||||||||||||||| |||||  ||||||||||||||||||||||    
T  19382 gtcctcgtgagtttagatcagttggtaaggacaatgcataatatat 19427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Complemental strand, 10824 - 10777
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||| |||||||||||||||||  ||||||||||||||||| ||||||    
T  10824 gtccccgtgagtttagctcagttggtaaggacaatgcataaaatatgc 10777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 295
Target Start/End: Original strand, 5417 - 5464
Alignment:
Q  248 aagtcctcgtgagtttagctcagtcagtaaggacaatgcataatatat 295  Q
    ||||||||||||| ||||||||||  ||||| ||||||||||||||||    
T  5417 aagtcctcgtgagcttagctcagttggtaagaacaatgcataatatat 5464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 297
Target Start/End: Complemental strand, 15516 - 15475
Alignment:
Q  256 gtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||| ||||| | |||||||||||||||||||||||    
T  15516 gtgagtttagttcagttaataaggacaatgcataatatatgc 15475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 295
Target Start/End: Original strand, 63856 - 63901
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatat 295  Q
    ||||||||||||||||||||||  ||| |||||||| |||||||||    
T  63856 gtcctcgtgagtttagctcagttggtagggacaatgtataatatat 63901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 295
Target Start/End: Original strand, 71188 - 71233
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataatatat 295  Q
    ||||||||||||||||||||||  ||| |||||||| |||||||||    
T  71188 gtcctcgtgagtttagctcagttggtagggacaatgtataatatat 71233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 28180 - 28140
Alignment:
Q  250 gtcctcgtgagtttagctcagtcagtaaggacaatgcataa 290  Q
    ||||||||||||||||||||||  ||| |||||||||||||    
T  28180 gtcctcgtgagtttagctcagttggtatggacaatgcataa 28140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 297
Target Start/End: Original strand, 17729 - 17773
Alignment:
Q  253 ctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||||||||||||||  ||| ||||||||||||||| ||||    
T  17729 ctcgtgagtttagctcagttggtatggacaatgcataatacatgc 17773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 297
Target Start/End: Original strand, 39995 - 40039
Alignment:
Q  253 ctcgtgagtttagctcagtcagtaaggacaatgcataatatatgc 297  Q
    |||||||| ||||||||||  ||| ||||||||||||||||||||    
T  39995 ctcgtgagcttagctcagttggtatggacaatgcataatatatgc 40039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University