View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21356_low_24 (Length: 227)
Name: NF21356_low_24
Description: NF21356
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21356_low_24 |
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Alignment Details
Target: chr4 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 7 - 214
Target Start/End: Original strand, 48599755 - 48599962
Alignment:
| Q |
7 |
ggaagcacatggacacgaacaaaaaacaagtatcagggctatgagattggtgaaaagacaacatgagatagttaacatgtgaaaaacttagtagtcaaaa |
106 |
Q |
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| T |
48599755 |
ggaagcacatggacacgaacaaaaaacaagtatcagggctatgagattggtgaaaagacaacatgagatagttaacatgtgaaaaacttagtagtcaaaa |
48599854 |
T |
|
| Q |
107 |
gttaatattgacttacagagcgagcggaccccacggcccaaggtcttgatcaacccatatcaagaaatccttcagaatctgcatggcgaaaatgtaaggg |
206 |
Q |
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| T |
48599855 |
gtaaatattgacttacagagcgagcggaccccacggcccaaggtcttgatcaacccatatcaagaaatccttcagaatctgcatggcgaaaatgtaaggg |
48599954 |
T |
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| Q |
207 |
gtaaccaa |
214 |
Q |
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|||||||| |
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| T |
48599955 |
gtaaccaa |
48599962 |
T |
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