View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21357_high_17 (Length: 207)

Name: NF21357_high_17
Description: NF21357
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21357_high_17
NF21357_high_17
[»] chr5 (31 HSPs)
chr5 (1-190)||(9603837-9604026)
chr5 (34-190)||(35943812-35943968)
chr5 (31-170)||(31009032-31009171)
chr5 (36-190)||(33149560-33149714)
chr5 (33-190)||(33825243-33825400)
chr5 (36-190)||(18520806-18520960)
chr5 (36-199)||(2740289-2740452)
chr5 (36-190)||(35785223-35785377)
chr5 (30-199)||(26720531-26720700)
chr5 (30-199)||(26990280-26990449)
chr5 (33-199)||(6679713-6679879)
chr5 (36-190)||(14831838-14831992)
chr5 (32-190)||(16327925-16328083)
chr5 (41-190)||(13811676-13811825)
chr5 (30-139)||(2177439-2177548)
chr5 (29-190)||(3921180-3921341)
chr5 (54-190)||(39557457-39557593)
chr5 (31-190)||(2252085-2252244)
chr5 (32-183)||(15409528-15409679)
chr5 (44-183)||(36732872-36733011)
chr5 (36-190)||(40145431-40145585)
chr5 (31-188)||(39688814-39688971)
chr5 (89-190)||(42414277-42414378)
chr5 (75-199)||(28177790-28177914)
chr5 (35-139)||(36875537-36875637)
chr5 (32-170)||(21370048-21370186)
chr5 (31-183)||(20073433-20073585)
chr5 (30-123)||(6259917-6260010)
chr5 (125-188)||(10227905-10227968)
chr5 (107-160)||(25831339-25831392)
chr5 (36-100)||(31132448-31132512)
[»] chr6 (20 HSPs)
chr6 (30-204)||(31952946-31953120)
chr6 (36-190)||(11427642-11427796)
chr6 (32-199)||(31976263-31976430)
chr6 (34-190)||(28536408-28536562)
chr6 (36-190)||(17598578-17598732)
chr6 (36-190)||(32869702-32869856)
chr6 (32-198)||(4231564-4231730)
chr6 (36-190)||(22880580-22880734)
chr6 (62-184)||(23128075-23128197)
chr6 (36-170)||(29857871-29858005)
chr6 (31-190)||(30341277-30341436)
chr6 (32-190)||(15989960-15990118)
chr6 (30-190)||(15507940-15508100)
chr6 (30-175)||(12732521-12732665)
chr6 (32-78)||(22421997-22422043)
chr6 (36-173)||(15832618-15832755)
chr6 (32-199)||(31110679-31110844)
chr6 (89-183)||(9379687-9379781)
chr6 (34-128)||(30870100-30870193)
chr6 (36-173)||(6209388-6209524)
[»] chr8 (34 HSPs)
chr8 (30-160)||(42354504-42354634)
chr8 (33-190)||(5957854-5958011)
chr8 (32-190)||(8841350-8841508)
chr8 (32-173)||(10284549-10284690)
chr8 (36-183)||(12831078-12831225)
chr8 (32-199)||(37038494-37038661)
chr8 (36-190)||(34012218-34012372)
chr8 (36-190)||(504043-504197)
chr8 (31-173)||(43414498-43414640)
chr8 (35-190)||(40423864-40424019)
chr8 (44-190)||(1179870-1180016)
chr8 (36-190)||(14547946-14548100)
chr8 (36-190)||(44507010-44507163)
chr8 (36-173)||(23122519-23122656)
chr8 (31-171)||(42221558-42221698)
chr8 (35-183)||(16056322-16056470)
chr8 (36-190)||(15197357-15197511)
chr8 (36-190)||(24307715-24307869)
chr8 (36-170)||(9122229-9122363)
chr8 (31-199)||(15048098-15048266)
chr8 (34-164)||(17443875-17444005)
chr8 (32-190)||(32032749-32032906)
chr8 (36-190)||(34307240-34307394)
chr8 (32-199)||(4854781-4854948)
chr8 (32-123)||(32707921-32708012)
chr8 (28-183)||(15258843-15258998)
chr8 (89-199)||(10621062-10621172)
chr8 (28-162)||(30183790-30183923)
chr8 (36-121)||(42710216-42710301)
chr8 (74-190)||(16383401-16383517)
chr8 (32-128)||(40467786-40467882)
chr8 (36-122)||(30479396-30479482)
chr8 (151-190)||(24307653-24307692)
chr8 (31-69)||(20074869-20074907)
[»] chr7 (39 HSPs)
chr7 (32-199)||(41423697-41423864)
chr7 (33-183)||(16374743-16374893)
chr7 (30-170)||(35522920-35523060)
chr7 (36-199)||(19329857-19330020)
chr7 (36-190)||(8080305-8080459)
chr7 (36-173)||(4999436-4999573)
chr7 (36-190)||(40957731-40957885)
chr7 (41-173)||(19436114-19436246)
chr7 (43-190)||(35137557-35137704)
chr7 (32-183)||(35468773-35468924)
chr7 (32-190)||(22343385-22343543)
chr7 (36-170)||(38837261-38837395)
chr7 (54-190)||(3784019-3784155)
chr7 (30-190)||(8238237-8238397)
chr7 (34-190)||(41915765-41915921)
chr7 (36-183)||(32951415-32951562)
chr7 (32-190)||(46033719-46033877)
chr7 (36-190)||(36362050-36362192)
chr7 (29-162)||(39255839-39255971)
chr7 (34-190)||(18207204-18207359)
chr7 (29-173)||(27744224-27744368)
chr7 (36-199)||(3434577-3434730)
chr7 (62-170)||(3694411-3694519)
chr7 (31-138)||(31735953-31736060)
chr7 (36-183)||(38267071-38267218)
chr7 (32-190)||(38044221-38044379)
chr7 (31-97)||(46374741-46374807)
chr7 (81-190)||(36208197-36208306)
chr7 (36-190)||(36361847-36361989)
chr7 (31-98)||(21234517-21234584)
chr7 (36-190)||(7389413-7389566)
chr7 (30-190)||(32564342-32564502)
chr7 (33-173)||(2318160-2318302)
chr7 (36-122)||(11044270-11044356)
chr7 (32-162)||(12310956-12311086)
chr7 (34-190)||(7727930-7728086)
chr7 (35-132)||(1766702-1766799)
chr7 (32-160)||(26296698-26296826)
chr7 (34-166)||(45223090-45223222)
[»] chr3 (42 HSPs)
chr3 (32-199)||(14623757-14623924)
chr3 (30-173)||(35536667-35536810)
chr3 (30-199)||(20764831-20765000)
chr3 (31-190)||(8076417-8076576)
chr3 (27-188)||(8956788-8956949)
chr3 (34-190)||(13897975-13898131)
chr3 (30-190)||(30801649-30801809)
chr3 (36-189)||(33644225-33644378)
chr3 (36-190)||(49607438-49607592)
chr3 (36-190)||(53982035-53982189)
chr3 (36-190)||(52629324-52629478)
chr3 (31-183)||(33118767-33118920)
chr3 (30-199)||(26141446-26141617)
chr3 (32-183)||(11347840-11347991)
chr3 (36-183)||(31456720-31456867)
chr3 (36-170)||(17470449-17470583)
chr3 (36-190)||(54868817-54868971)
chr3 (32-161)||(35093638-35093767)
chr3 (30-173)||(24699871-24700013)
chr3 (29-183)||(51419275-51419429)
chr3 (32-160)||(25407065-25407193)
chr3 (30-190)||(41189680-41189840)
chr3 (28-188)||(42823137-42823297)
chr3 (30-190)||(45058469-45058628)
chr3 (32-184)||(35965700-35965844)
chr3 (32-190)||(36331247-36331405)
chr3 (34-128)||(43746425-43746519)
chr3 (30-190)||(26754719-26754879)
chr3 (111-190)||(27714888-27714967)
chr3 (36-190)||(48587023-48587167)
chr3 (32-133)||(21746106-21746207)
chr3 (34-173)||(1758379-1758515)
chr3 (73-173)||(41080749-41080848)
chr3 (36-102)||(11095289-11095355)
chr3 (30-164)||(47531915-47532049)
chr3 (36-160)||(9563053-9563177)
chr3 (36-123)||(36707350-36707437)
chr3 (37-188)||(39670037-39670188)
chr3 (34-162)||(48375626-48375754)
chr3 (32-70)||(11140961-11140999)
chr3 (36-182)||(25395256-25395401)
chr3 (146-190)||(11095385-11095429)
[»] chr2 (41 HSPs)
chr2 (32-188)||(20700841-20700997)
chr2 (36-183)||(7465657-7465804)
chr2 (36-190)||(28863479-28863633)
chr2 (36-183)||(13438374-13438521)
chr2 (36-183)||(17473051-17473198)
chr2 (43-190)||(33436029-33436176)
chr2 (36-190)||(19930742-19930896)
chr2 (36-173)||(10249304-10249441)
chr2 (54-190)||(9058504-9058640)
chr2 (31-199)||(40613819-40613987)
chr2 (36-190)||(40701502-40701656)
chr2 (36-173)||(32505570-32505707)
chr2 (31-173)||(13365394-13365536)
chr2 (30-183)||(38732385-38732538)
chr2 (33-160)||(44151978-44152108)
chr2 (31-138)||(17823864-17823971)
chr2 (33-190)||(17819923-17820080)
chr2 (36-190)||(30915487-30915641)
chr2 (31-188)||(2533150-2533306)
chr2 (30-190)||(2997403-2997563)
chr2 (31-199)||(42257208-42257376)
chr2 (28-171)||(3440022-3440165)
chr2 (32-171)||(3737986-3738125)
chr2 (32-183)||(36168867-36169018)
chr2 (32-183)||(43490152-43490303)
chr2 (36-171)||(28381577-28381712)
chr2 (34-164)||(21301420-21301550)
chr2 (36-173)||(4060726-4060863)
chr2 (36-190)||(5574422-5574564)
chr2 (34-123)||(41758678-41758767)
chr2 (36-164)||(15428663-15428790)
chr2 (30-173)||(33436252-33436385)
chr2 (32-183)||(38273061-38273211)
chr2 (31-190)||(45097652-45097811)
chr2 (36-102)||(38882733-38882799)
chr2 (32-164)||(3034901-3035033)
chr2 (34-187)||(41575164-41575308)
chr2 (32-190)||(26891422-26891580)
chr2 (109-188)||(27864730-27864809)
chr2 (36-97)||(27864808-27864869)
chr2 (93-165)||(3154192-3154264)
[»] chr4 (40 HSPs)
chr4 (30-190)||(29239910-29240070)
chr4 (31-199)||(50052345-50052513)
chr4 (36-190)||(6034068-6034222)
chr4 (31-199)||(50526088-50526256)
chr4 (36-188)||(48182971-48183123)
chr4 (32-170)||(41823926-41824064)
chr4 (34-199)||(40574794-40574959)
chr4 (36-190)||(41236371-41236525)
chr4 (28-164)||(28480182-28480318)
chr4 (28-164)||(28481057-28481193)
chr4 (28-164)||(28481932-28482068)
chr4 (31-190)||(29547876-29548035)
chr4 (36-190)||(42044289-42044443)
chr4 (28-173)||(31910233-31910378)
chr4 (30-190)||(19670632-19670792)
chr4 (32-190)||(50813810-50813968)
chr4 (62-183)||(480395-480516)
chr4 (30-190)||(47986232-47986391)
chr4 (32-190)||(55475215-55475373)
chr4 (30-190)||(3481678-3481828)
chr4 (36-173)||(23608276-23608413)
chr4 (30-190)||(17983659-17983819)
chr4 (34-190)||(29977909-29978065)
chr4 (36-183)||(24995029-24995176)
chr4 (36-190)||(11511385-11511538)
chr4 (30-183)||(29589656-29589809)
chr4 (73-183)||(29234204-29234314)
chr4 (35-172)||(47104586-47104723)
chr4 (33-170)||(48647645-48647782)
chr4 (48-173)||(54473467-54473592)
chr4 (38-170)||(18768972-18769103)
chr4 (30-122)||(18924411-18924503)
chr4 (31-190)||(44536663-44536821)
chr4 (35-182)||(56300086-56300233)
chr4 (36-183)||(53352496-53352635)
chr4 (31-190)||(32766982-32767141)
chr4 (149-190)||(8343198-8343239)
chr4 (61-170)||(18769153-18769261)
chr4 (91-139)||(29535451-29535499)
chr4 (91-131)||(32939639-32939679)
[»] chr1 (32 HSPs)
chr1 (32-199)||(32813262-32813429)
chr1 (32-199)||(51898601-51898768)
chr1 (36-199)||(27564657-27564820)
chr1 (30-190)||(11152294-11152454)
chr1 (32-188)||(44454005-44454165)
chr1 (43-190)||(50630482-50630629)
chr1 (36-190)||(9474798-9474952)
chr1 (36-190)||(47452242-47452396)
chr1 (36-199)||(37649213-37649376)
chr1 (36-183)||(41758836-41758983)
chr1 (36-190)||(48716204-48716358)
chr1 (27-173)||(5958913-5959059)
chr1 (31-171)||(3302450-3302590)
chr1 (36-190)||(2581939-2582093)
chr1 (36-190)||(3000343-3000497)
chr1 (32-190)||(37926356-37926514)
chr1 (36-190)||(38595178-38595332)
chr1 (32-190)||(50590918-50591076)
chr1 (36-183)||(43163-43310)
chr1 (32-183)||(7740764-7740915)
chr1 (46-164)||(38632253-38632371)
chr1 (32-190)||(41608411-41608569)
chr1 (30-102)||(45044476-45044548)
chr1 (34-173)||(49811447-49811586)
chr1 (30-190)||(47748467-47748626)
chr1 (36-190)||(8346309-8346464)
chr1 (32-190)||(6260894-6261052)
chr1 (65-183)||(13414792-13414910)
chr1 (89-199)||(44548351-44548461)
chr1 (34-102)||(34339968-34340035)
chr1 (36-102)||(26274541-26274607)
chr1 (32-173)||(44332289-44332430)
[»] scaffold1268 (1 HSPs)
scaffold1268 (33-199)||(848-1014)
[»] scaffold1267 (1 HSPs)
scaffold1267 (33-199)||(848-1014)
[»] scaffold0237 (1 HSPs)
scaffold0237 (36-170)||(4073-4207)
[»] scaffold0018 (1 HSPs)
scaffold0018 (33-189)||(152523-152679)
[»] scaffold0110 (1 HSPs)
scaffold0110 (30-173)||(8779-8922)
[»] scaffold0321 (1 HSPs)
scaffold0321 (36-190)||(10031-10185)
[»] scaffold0316 (1 HSPs)
scaffold0316 (30-118)||(17199-17287)


Alignment Details
Target: chr5 (Bit Score: 122; Significance: 9e-63; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 9604026 - 9603837
Alignment:
Q  1 gcacatgtttcttttatcttacttgatataaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaa 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||| || |||| |||| |||| | ||||||||||    
T  9604026 gcacatgtttcttttatcttacttaatataagtaaaatgttacgtagacaccatttattctcatacacctttgtacatcccaagcactaagaagagagaa 9603927  T
Q  101 gacgaaatgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    ||||||||||||||||||||||||||||||||| |||| |||| || ||||||||||||||||||||||| ||||  ||||||| |||||    
T  9603926 gacgaaatgaaagagaaagtgtgattgtatggggtccatatgaccatgtgtcagatttttgtgtaggtgtgaatgagtgtattatcacct 9603837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 34 - 190
Target Start/End: Original strand, 35943812 - 35943968
Alignment:
Q  34 aaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatggg 133  Q
    ||||||||||||||||||  ||||||  ||||||||||| |||||||||||||| ||||||||| |||| || | ||||||||||||||| |||| ||||    
T  35943812 aaaatgttacatagacacattttatttccatacacccttgtacaccccatgcactaggaagagaaaagaggagaggaaagagaaagtgtgcttgtgtggg 35943911  T
Q  134 atccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||||| | |  ||||||||||||||||||| ||||||||  |||||||| ||||||    
T  35943912 atccacgtaactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacct 35943968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 31 - 170
Target Start/End: Complemental strand, 31009171 - 31009032
Alignment:
Q  31 aggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtat 130  Q
    |||||||||||||||||||||| |||||||||||||||| || |||||||||||||| ||||||||||||||  | | |||| |||||||||| ||||      
T  31009171 aggaaaatgttacatagacaccctttattctcatacacctttgtacaccccatgcactaggaagagagaagagaagaggaaatagaaagtgtgcttgtgc 31009072  T
Q  131 gggatccacatgatcacgtgtcagatttttgtgtaggtgt 170  Q
    ||||||||| |||  ||||||||||||||||||| |||||    
T  31009071 gggatccacgtgactacgtgtcagatttttgtgtgggtgt 31009032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 36 - 190
Target Start/End: Original strand, 33149560 - 33149714
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| ||||||||| ||||||||| |||||||||||||  |||||||||||||| || |  |||||||||||||| ||||  |||||    
T  33149560 aatgatacatagacaccctttattctcgtacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 33149659  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| |||  |||||||| |||||||||| |||||||| || |||||||||||||    
T  33149660 ccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacct 33149714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 33 - 190
Target Start/End: Original strand, 33825243 - 33825400
Alignment:
Q  33 gaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgg 132  Q
    ||||||||||||| ||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||  | || |||||||||||||| |||| |      
T  33825243 gaaaatgttacattgacaccatttattctcatacagccttctacaccccatgcactaggaagagagaagagaagataaaagagaaagtgtgcttgtgtaa 33825342  T
Q  133 gatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    | | ||||||| |||||||||||||||| ||| |||||||| |  |||||| ||||||    
T  33825343 ggttcacatgaacacgtgtcagatttttatgtgggtgtcaaggagtgtattgccacct 33825400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 36 - 190
Target Start/End: Original strand, 18520806 - 18520960
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| |||||| |||||||||||| |||||| ||||||  |||||||||||||| || || |||||||||||||| ||||  ||| |    
T  18520806 aatgatacatagacaccctttattttcatacacccttgtacacctcatgcattaggaagagagaagaggagataaaagagaaagtgtgcttgtgcggggt 18520905  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| |||  ||||||||||||||||||| |||||||| || |||||| ||||||    
T  18520906 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacct 18520960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 36 - 199
Target Start/End: Complemental strand, 2740452 - 2740289
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| ||||||| ||||||||||| |||| ||||||||  |||||||||||||  || |  |||||||||||||| ||||  |||||    
T  2740452 aatgatacatagacaccctttattcccatacacccttgtacatcccatgcattaggaagagagaaggggagagaaaagagaaagtgtgcttgtgcgggat 2740353  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctgatgatgtc 199  Q
    |||| |||  ||||||||||||||||||| |||||||| || |||||| |||||| | ||||||    
T  2740352 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtc 2740289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 36 - 190
Target Start/End: Complemental strand, 35785377 - 35785223
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| ||||||  ||||||||||| |||||||||||||  |||||||||||||| || |  |||||||||||||||||||  |||||    
T  35785377 aatgatacatagacaccttttatttccatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaagagaaagtgtgattgtgcgggat 35785278  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| | |  ||||||||||||||||||| ||||||||  | |||||| ||||||    
T  35785277 ccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacct 35785223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 30 - 199
Target Start/End: Complemental strand, 26720700 - 26720531
Alignment:
Q  30 aaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgta 129  Q
    ||||||||||||| ||||||| ||||||||||||||||||||  |||||||||| ||  ||||||||||||||  | |  |||||||||||||| ||||     
T  26720700 aaggaaaatgttatatagacatcatttattctcatacaccctagtacaccccatacattaggaagagagaagagaagagaaaagagaaagtgtgcttgtg 26720601  T
Q  130 tgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctgatgatgtc 199  Q
     ||||||||  ||  |||||||||||||||| ||||||||| || || |||||| |||||| | ||||||    
T  26720600 cgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtc 26720531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 30 - 199
Target Start/End: Complemental strand, 26990449 - 26990280
Alignment:
Q  30 aaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgta 129  Q
    ||||||||||||| ||||||| ||||||||||||||||||||  |||||||||| ||  ||||||||||||||  | |  |||||||||||||| ||||     
T  26990449 aaggaaaatgttatatagacatcatttattctcatacaccctagtacaccccatacattaggaagagagaagagaagagaaaagagaaagtgtgcttgtg 26990350  T
Q  130 tgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctgatgatgtc 199  Q
     ||||||||  ||  |||||||||||||||| ||||||||| || || |||||| |||||| | ||||||    
T  26990349 cgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtc 26990280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 33 - 199
Target Start/End: Complemental strand, 6679879 - 6679713
Alignment:
Q  33 gaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgg 132  Q
    |||||||||||||||||| |||||||| |||||||||||| ||||||| || ||  |||||||||||||| || |  ||||||||| |||| ||||  ||    
T  6679879 gaaaatgttacatagacatcatttattgtcatacacccttgtacaccctatacattaggaagagagaagaggagagaaaagagaaaatgtgtttgtgcgg 6679780  T
Q  133 gatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctgatgatgtc 199  Q
    | ||||  ||| |||||||||||||||||||| ||||||||  | |||||| |||||| | ||||||    
T  6679779 ggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaagatgtc 6679713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 36 - 190
Target Start/End: Complemental strand, 14831992 - 14831838
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| ||||||| |||||| |||| |||||||||||||  |||||||||||||| || |  ||| |||||||||| ||||  |||||    
T  14831992 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagaggagaaaaaaaagaaagtgtgcttgtgcgggat 14831893  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| |||  ||||||||||||||| ||| |||||||| || |||||| ||||||    
T  14831892 ccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacct 14831838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 32 - 190
Target Start/End: Complemental strand, 16328083 - 16327925
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    ||||||||||| ||| |||||||||||| ||||| ||  || ||||||||||  |  ||| ||||||||||  |||||||||| |||||||| |||| ||    
T  16328083 ggaaaatgttagataaacaccatttattttcatatacttttctacaccccatatattagggagagagaagagaaaatgaaagaaaaagtgtgcttgtgtg 16327984  T
Q  132 ggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
     | | ||||||| |||||||||||||||| ||| |||||||||||||||||| ||||||    
T  16327983 aggtgcacatgaacacgtgtcagatttttatgtgggtgtcaatggatgtattgccacct 16327925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 41 - 190
Target Start/End: Complemental strand, 13811825 - 13811676
Alignment:
Q  41 tacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggatccaca 140  Q
    |||||||||||||||||||| |||||| |||| |||| ||||||||  |||||||||||||| || |   ||||||||||||| ||||  ||| |||||     
T  13811825 tacatagacaccatttattcccatacatccttgtacatcccatgcattaggaagagagaagaggagagagaagagaaagtgtgcttgtgcggggtccacg 13811726  T
Q  141 tgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||  ||||||||||||||||||| ||||||||  |||||||| ||||||    
T  13811725 tgactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacct 13811676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 2177548 - 2177439
Alignment:
Q  30 aaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgta 129  Q
    ||||||||||||||| ||||||  ||||||||||||||||||| |||| || |||||| |||||||||||||| || | |||||||||| |||| ||||     
T  2177548 aaggaaaatgttacagagacacattttattctcatacacccttgtacatccaatgcactaggaagagagaagaggagaggaaagagaaaatgtgcttgtg 2177449  T
Q  130 tgggatccac 139  Q
    ||||||||||    
T  2177448 tgggatccac 2177439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 29 - 190
Target Start/End: Original strand, 3921180 - 3921341
Alignment:
Q  29 taaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgt 128  Q
    |||||||||||||||||||||||| |||| |  ||||||||||| ||||||||||  |  ||||||||||||||  | | ||||||||||||||  ||||    
T  3921180 taaggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgt 3921279  T
Q  129 atgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
      ||| |||| |||  ||| |||||||||||||||| |||||||| || |||||| ||||||    
T  3921280 gcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacct 3921341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 54 - 190
Target Start/End: Original strand, 39557457 - 39557593
Alignment:
Q  54 tttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtca 153  Q
    |||||||||||| | || | |||||| |||| |  |||||||||||||| || || |||||||||||||||||||||||| ||||  |||||||||||||    
T  39557457 tttattctcatagatccatgtacacctcatgtattaggaagagagaagaggagataaaagagaaagtgtgattgtatggggtccatgtgatcacgtgtca 39557556  T
Q  154 gatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    ||||||||||| | ||| ||  | |||||||||||||    
T  39557557 gatttttgtgtggatgttaagaggtgtattaccacct 39557593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 31 - 190
Target Start/End: Original strand, 2252085 - 2252244
Alignment:
Q  31 aggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtat 130  Q
    |||||||||||||||||||||| |||| |  ||||||||||| ||||||||||  |  ||||||||||||||  | | ||||||||||||||  ||||      
T  2252085 aggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgc 2252184  T
Q  131 gggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    ||| |||| |||  ||| |||||||||||||||| |||||||| || |||||| ||||||    
T  2252185 ggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacct 2252244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 32 - 183
Target Start/End: Original strand, 15409528 - 15409679
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    ||||||||||||||| ||||| ||||||| ||||||||||| |||||||||| ||  |||||||||||||| || |  ||||||| |||||| ||||  |    
T  15409528 ggaaaatgttacataaacaccctttattcgcatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagagagtgtgcttgtgcg 15409627  T
Q  132 ggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtatt 183  Q
    || ||||  ||   ||||||||||||||||||| |||||||| | |||||||    
T  15409628 gggtccatgtggctacgtgtcagatttttgtgtgggtgtcaaagaatgtatt 15409679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 44 - 183
Target Start/End: Original strand, 36732872 - 36733011
Alignment:
Q  44 atagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggatccacatga 143  Q
    ||||||||| ||||||| ||||||||||| |||||| ||||||  |||||||||||||| || |  |||||||||||||| ||||  ||| ||||| |||    
T  36732872 atagacaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtga 36732971  T
Q  144 tcacgtgtcagatttttgtgtaggtgtcaatggatgtatt 183  Q
      | ||||||||||||||||| |||||||| || ||||||    
T  36732972 ctatgtgtcagatttttgtgtgggtgtcaaagggtgtatt 36733011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 36 - 190
Target Start/End: Complemental strand, 40145585 - 40145431
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| |||||||||||| |||||| |||||| | ||||  |||||||||||||| || |  |||||||||||||| ||||  ||| |    
T  40145585 aatgatacatagacaccctttattctcatatacccttgtacacctcgtgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 40145486  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| |||  ||||||||||||||||||| | ||| || || |||||| ||||||    
T  40145485 ccacgtgactacgtgtcagatttttgtgtggatgttaaagggtgtattgccacct 40145431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 188
Target Start/End: Original strand, 39688814 - 39688971
Alignment:
Q  31 aggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtat 130  Q
    |||||||||||||||||||||| |||| |  |||||||| || ||||||| ||| |  ||||||||||||||  | | ||||||||||||||  || |      
T  39688814 aggaaaatgttacatagacaccttttaattgcatacacctttgtacaccctatgtattaggaagagagaagaaaagaagaaagagaaagtgtacttatgc 39688913  T
Q  131 gggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccac 188  Q
    ||| | || |||| ||| | |||||||||||||| |||||||| ||||||||| ||||    
T  39688914 ggggttcatatgaccacatatcagatttttgtgtgggtgtcaagggatgtattgccac 39688971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 190
Target Start/End: Original strand, 42414277 - 42414378
Alignment:
Q  89 aggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccac 188  Q
    |||||||||||||| ||||  ||||| |||||||| ||||  ||| |||||||||  ||||||||||||||||||| |||||||| || |||||| ||||    
T  42414277 aggaagagagaagaggaaagaaaagataaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 42414376  T
Q  189 ct 190  Q
    ||    
T  42414377 ct 42414378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 199
Target Start/End: Complemental strand, 28177914 - 28177790
Alignment:
Q  75 acaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaat 174  Q
    ||||||||| ||  |||||||| ||||| || |  |||||||||||||| ||||  ||| ||||  ||| |||||||||||||||||||| ||||||||     
T  28177914 acaccccatacattaggaagagggaagaggagagaaaagagaaagtgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaa 28177815  T
Q  175 ggatgtattaccacctgatgatgtc 199  Q
    || |||||| |||||| | ||||||    
T  28177814 gggtgtattgccacctaaggatgtc 28177790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 35 - 139
Target Start/End: Original strand, 36875537 - 36875637
Alignment:
Q  35 aaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatggga 134  Q
    |||||||||||||||||||||||||    | ||||||| ||||||||||| |  |||||||||||||| || |  |||||||||||||| ||||  ||||    
T  36875537 aaatgttacatagacaccatttatt----tccacccttgtacaccccatgtattaggaagagagaagaggagaaaaaagagaaagtgtgcttgtgcggga 36875632  T
Q  135 tccac 139  Q
    |||||    
T  36875633 tccac 36875637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 21370186 - 21370048
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    ||||||||||||||| ||||| |||||| ||||||||| || |||| |  ||  || ||||||| |||||| || | |||||||||| |||| ||||  |    
T  21370186 ggaaaatgttacataaacaccctttattttcatacacctttgtacatcttatatactaggaagaaagaagatgagaggaaagagaaaatgtgtttgtgcg 21370087  T
Q  132 ggatccacatgatcacgtgtcagatttttgtgtaggtgt 170  Q
    || ||||| ||| ||| ||||||||||||| || |||||    
T  21370086 gggtccacgtgaccacatgtcagatttttgagtgggtgt 21370048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 183
Target Start/End: Original strand, 20073433 - 20073585
Alignment:
Q  31 aggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtat 130  Q
    |||||||||||| |||||||   |||||||||||||||| || || | | |||| || |||||||||||||| || | |||| |||||||||| ||||      
T  20073433 aggaaaatgttagatagacattttttattctcatacacctttgtaaatctcatgaactaggaagagagaagaggagaggaaatagaaagtgtgcttgtgc 20073532  T
Q  131 gggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtatt 183  Q
     || ||||| || |||||||  |||||||| |||  ||||||| || ||||||    
T  20073533 agggtccacgtggtcacgtgcaagatttttatgtgagtgtcaaagggtgtatt 20073585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 6259917 - 6260010
Alignment:
Q  30 aaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtg 123  Q
    ||||||||||||||||||| | | |||||||  |||||| ||| |||| ||||| ||  ||  |||||||||| || |||||||||||||||||    
T  6259917 aaggaaaatgttacatagatatcctttattcctatacacacttgtacatcccatacattagtgagagagaagaggagatgaaagagaaagtgtg 6260010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 125 - 188
Target Start/End: Original strand, 10227905 - 10227968
Alignment:
Q  125 ttgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccac 188  Q
    |||| ||| |||||||| ||||| |||||||||||||| | |||||||| ||||||||| ||||    
T  10227905 ttgtgtggaatccacataatcacatgtcagatttttgtatcggtgtcaagggatgtattgccac 10227968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 160
Target Start/End: Complemental strand, 25831392 - 25831339
Alignment:
Q  107 atgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagattttt 160  Q
    |||||||||||| |||| |||| |||| ||||||||| ||||||| ||||||||    
T  25831392 atgaaagagaaaatgtgtttgtgtggggtccacatgaccacgtgttagattttt 25831339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 100
Target Start/End: Complemental strand, 31132512 - 31132448
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaa 100  Q
    |||| |||||| ||||| |||||| |||||||||||| |||||| ||||||  || |||||||||    
T  31132512 aatgatacataaacaccctttattttcatacacccttgtacacctcatgcattagaaagagagaa 31132448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 1e-46; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 30 - 204
Target Start/End: Original strand, 31952946 - 31953120
Alignment:
Q  30 aaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgta 129  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||  | ||||||||||||||||| ||||     
T  31952946 aaggaaaatgttacatagacaccatttattctcatacatccttctacaccccatgcactaggaagagagaagagaagatgaaagagaaagtgtgtttgtg 31953045  T
Q  130 tgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctgatgatgtccatct 204  Q
    || | ||||||||| ||| |||||||||||| ||| |||||||| || |||||| |||||| | |||||| ||||    
T  31953046 tgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatct 31953120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 36 - 190
Target Start/End: Complemental strand, 11427796 - 11427642
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| ||||||||||||||||||| |||||||||||||  |||||||||||||| || |  |||||||||||||| ||||  |||||    
T  11427796 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 11427697  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| |||  ||||||||||||||||||| |||||||| ||||||||| ||||||    
T  11427696 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacct 11427642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 32 - 199
Target Start/End: Complemental strand, 31976430 - 31976263
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||  |||||||||||||| || |  |||||||||||||| ||||  |    
T  31976430 ggaaaatgttacatagacaccatttattctcatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcg 31976331  T
Q  132 ggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctgatgatgtc 199  Q
    || | ||  ||| |||||||||||||||||||| ||||| || || | |||| |||||| | ||||||    
T  31976330 gggttcatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtatattgccacctaaggatgtc 31976263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 34 - 190
Target Start/End: Original strand, 28536408 - 28536562
Alignment:
Q  34 aaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatggg 133  Q
    |||||||||||| |||| |||||||| |||||||||||| |||||||||||||  |||||||| |||||  | || |||||||||||||| |||| ||||    
T  28536408 aaaatgttacatcgacatcatttattttcatacacccttgtacaccccatgcagtaggaagagggaagagaagataaaagagaaagtgtgcttgtgtggg 28536507  T
Q  134 atccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
     |||||||||   |||||||||||||||||| |||||||| || |||||| ||||||    
T  28536508 gtccacatga--ccgtgtcagatttttgtgtgggtgtcaagggttgtattgccacct 28536562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 36 - 190
Target Start/End: Complemental strand, 17598732 - 17598578
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| ||||||  ||||||||||| |||||||||||||  |||||||||||||| || |  |||||||||||||| ||||  ||| |    
T  17598732 aatgatacatagacaccttttatttccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 17598633  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| |||  ||||||||||||||||||| ||||||||  |||||||| ||||||    
T  17598632 ccacgtgacaacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacct 17598578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 36 - 190
Target Start/End: Complemental strand, 32869856 - 32869702
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| ||||||| |||||| |||| |||||||||||||  |||||||||||||| || |  |||||||||||||| ||||  ||| |    
T  32869856 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 32869757  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| |||  ||||||||||||||||||| |||||||| || |||||| ||||||    
T  32869756 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacct 32869702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 32 - 198
Target Start/End: Complemental strand, 4231730 - 4231564
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    ||||||||||||||||||||| |||| |  ||||||||||| ||||||||||| |  ||||||||||||||  | | ||||||||||||||  ||||  |    
T  4231730 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 4231631  T
Q  132 ggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctgatgatgt 198  Q
    || |||| |||  |||||||||||||||||||| |||| ||| || |||||| |||||| |||||||    
T  4231630 gggtccatatggccacgtgtcagatttttgtgtgggtggcaaggggtgtattgccacctaatgatgt 4231564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 36 - 190
Target Start/End: Original strand, 22880580 - 22880734
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||| ||||||||||||| ||||||||||| ||||||||||| |  |||||||||||||| || |  |||||||||||||| ||||  ||| |    
T  22880580 aatgatacatatacaccatttattcccatacacccttgtacaccccatgtattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 22880679  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| |||  |||||||||| |||||||| |||||||| || |||||| ||||||    
T  22880680 ccacgtgactacgtgtcagaattttgtgtgggtgtcaaagggtgtattgccacct 22880734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 62 - 184
Target Start/End: Original strand, 23128075 - 23128197
Alignment:
Q  62 catacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttg 161  Q
    ||||||||||| |||| ||||||||  ||||||||| |||| || |  |||||||||||||| |||| |||||||||| |||  ||||||||||||||||    
T  23128075 catacacccttgtacatcccatgcattaggaagagaaaagaggagagaaaagagaaagtgtgcttgtgtgggatccacgtgactacgtgtcagatttttg 23128174  T
Q  162 tgtaggtgtcaatggatgtatta 184  Q
    ||| |||||||| ||||||||||    
T  23128175 tgtgggtgtcaaaggatgtatta 23128197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 36 - 170
Target Start/End: Complemental strand, 29858005 - 29857871
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||||||||||| ||||||||||| |||||||||||||  ||||||||||||||  | |  |||||||||||||| || |  |||||    
T  29858005 aatgatacatagacaccatttattcccatacacccttgtacaccccatgcattaggaagagagaagagaagagaaaagagaaagtgtgcttatgcgggat 29857906  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgt 170  Q
    |||| | |  ||||||||||||||||||| |||||    
T  29857905 ccacgtaactacgtgtcagatttttgtgtgggtgt 29857871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 31 - 190
Target Start/End: Original strand, 30341277 - 30341436
Alignment:
Q  31 aggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtat 130  Q
    |||||||||||||||||||||| |||| |  ||||||||||| ||||||||||  |  ||||||||||||||  | | ||||||||||||||  ||||      
T  30341277 aggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgc 30341376  T
Q  131 gggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    ||| |||| |||  ||| |||||||||||||||| |||||||| || |||||| ||||||    
T  30341377 ggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacct 30341436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 32 - 190
Target Start/End: Original strand, 15989960 - 15990118
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    ||||||||||||||||||||| |||| |  ||||||||||| ||||||||||  |  ||||||||||||||  | | ||||||||||||||  ||||  |    
T  15989960 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 15990059  T
Q  132 ggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    || |||| |||  ||| |||||||||||||||| |||||||| || |||||| ||||||    
T  15990060 gggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacct 15990118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 30 - 190
Target Start/End: Original strand, 15507940 - 15508100
Alignment:
Q  30 aaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgta 129  Q
    ||||||||||||||||||||||| |||| |  |||||| |||| ||||||||||  |  ||||||||||||||  | | ||||||||||||||  ||||     
T  15507940 aaggaaaatgttacatagacaccttttaattgcatacatccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtg 15508039  T
Q  130 tgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
     ||| |||| |||  ||| |||||||||||||||| |||||||| || |||||| ||||||    
T  15508040 cggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacct 15508100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 175
Target Start/End: Complemental strand, 12732665 - 12732521
Alignment:
Q  30 aaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgta 129  Q
    ||||||||||||||||||||| | ||||||  ||||||   || | ||||  ||| || || ||||||||||| || |||||||||||| |||| || |     
T  12732665 aaggaaaatgttacatagacatc-tttatttccatacatttttgtgcaccttatgtactagaaagagagaagaggagatgaaagagaaaatgtgcttatg 12732567  T
Q  130 tgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatg 175  Q
    ||||||||||||   |||||||||||||||||||| ||||||||||    
T  12732566 tgggatccacatagccacgtgtcagatttttgtgtgggtgtcaatg 12732521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 22421997 - 22422043
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacac 78  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  22421997 ggaaaatgttacatagacaccatttattctcatacacccttgtacac 22422043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 36 - 173
Target Start/End: Complemental strand, 15832755 - 15832618
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| ||| |||||||| |||||||  |||||||||| |||||||||||||  ||||||| |||||| || |  ||||||||| |||  ||||   ||||    
T  15832755 aatgatacgtagacaccctttattccaatacacccttgtacaccccatgcattaggaagatagaagaggagaaaaaagagaaaatgtatttgtgcaggat 15832656  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaa 173  Q
    |||| |||  |||||||| |||||||||| ||||||||    
T  15832655 ccacgtgactacgtgtcaaatttttgtgtgggtgtcaa 15832618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 199
Target Start/End: Original strand, 31110679 - 31110844
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    ||||||||||||||||||| | ||||||  |||||||| || |||||||||| ||  ||||||||||||||  | |  |||||||||||||| ||||       
T  31110679 ggaaaatgttacatagacatcctttatttccatacacctttgtacaccccatacattaggaagagagaagagtagagaaaagagaaagtgtgcttgtgca 31110778  T
Q  132 ggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctgatgatgtc 199  Q
    || ||||  || | ||||||||||||||||||   ||||||| || |||||| |||||| | ||||||    
T  31110779 gggtccatgtggttacgtgtcagatttttgtg--agtgtcaaagggtgtattgccacctaaggatgtc 31110844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 89 - 183
Target Start/End: Original strand, 9379687 - 9379781
Alignment:
Q  89 aggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtatt 183  Q
    ||||||||| ||||  | |||||||||||| |||| |||| || ||||||||||  ||||||||| |||||||| | |||||||| |||||||||    
T  9379687 aggaagagaaaagagaagatgaaagagaaaatgtgtttgtgtgagatccacatggccacgtgtcaaatttttgtatgggtgtcaagggatgtatt 9379781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 128
Target Start/End: Complemental strand, 30870193 - 30870100
Alignment:
Q  34 aaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgt 128  Q
    ||||||||| ||||||||| |||||| ||||||||| || ||||||| ||  || || ||||||||||| || | |||||||||| |||| ||||    
T  30870193 aaaatgtta-atagacaccctttattttcatacacctttgtacaccctatatactagaaagagagaagaggagaggaaagagaaaatgtgcttgt 30870100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 173
Target Start/End: Original strand, 6209388 - 6209524
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||| ||| ||||||| | |||| | || |||| ||||||||  |||||||||||||| || |  |||||||||||||| | ||  ||| |    
T  6209388 aatgatacatagataccctttattccc-tacatctttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgctagtgcggggt 6209486  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaa 173  Q
    |||| |||  ||||| |||||||||||||  |||||||    
T  6209487 ccacgtgactacgtgacagatttttgtgtgagtgtcaa 6209524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 3e-44; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 42354504 - 42354634
Alignment:
Q  30 aaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgta 129  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||  | ||||||||||||||||| || |     
T  42354504 aaggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactaggaagagagaagagaagatgaaagagaaagtgtgcttatg 42354603  T
Q  130 tgggatccacatgatcacgtgtcagattttt 160  Q
    || ||||||||||| ||||||||||||||||    
T  42354604 tgagatccacatgaacacgtgtcagattttt 42354634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 33 - 190
Target Start/End: Complemental strand, 5958011 - 5957854
Alignment:
Q  33 gaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgg 132  Q
    |||||||||||||| ||||| ||||||||||||||||||| |||||| ||||||| |||||||||||||| || | ||||||||||||||||||||  ||    
T  5958011 gaaaatgttacataaacaccctttattctcatacacccttgtacacctcatgcactaggaagagagaagaggagaggaaagagaaagtgtgattgtgcgg 5957912  T
Q  133 gatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    ||||||| |||  ||||||||||||||||||| |||||||| || |||||| ||||||    
T  5957911 gatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacct 5957854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 32 - 190
Target Start/End: Original strand, 8841350 - 8841508
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||| |||||||| || | ||||||||||||||| ||||  |    
T  8841350 ggaaaatgttacatagacaccatttattctcatacactcttgtacaccccatgcactaggaaaagagaagaggagaggaaagagaaagtgtgcttgtgcg 8841449  T
Q  132 ggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    || ||||| |||  |||||| |||||||||||| |||||||| || |||| | ||||||    
T  8841450 gggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacct 8841508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 32 - 173
Target Start/End: Original strand, 10284549 - 10284690
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    ||||||||||||||||||||| |||||||| ||||| |||| |||||||||||||| |||||||||||||| |||| ||||||||||||||| ||||  |    
T  10284549 ggaaaatgttacatagacaccttttattcttatacaaccttgtacaccccatgcactaggaagagagaagatgaaaggaaagagaaagtgtgcttgtgcg 10284648  T
Q  132 ggatccacatgatcacgtgtcagatttttgtgtaggtgtcaa 173  Q
    || ||||| |||  |||||||| |||||||||| ||||||||    
T  10284649 gggtccacgtgactacgtgtcaaatttttgtgtgggtgtcaa 10284690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 36 - 183
Target Start/End: Complemental strand, 12831225 - 12831078
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||| || |  |||||||||||||| ||||  ||| |    
T  12831225 aatgatacatagacaccatttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 12831126  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtatt 183  Q
    |||| |||  ||||||||||||||||||| |||||||| || ||||||    
T  12831125 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtatt 12831078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 32 - 199
Target Start/End: Complemental strand, 37038661 - 37038494
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    ||||||||||||||| ||||| ||||||   |||||||||| |||||||||||||| |||||||||||||| || | |||| |||||||||| ||||  |    
T  37038661 ggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaatagaaagtgtgcttgtgcg 37038562  T
Q  132 ggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctgatgatgtc 199  Q
    |||||||| |||  ||||||||||||||||||| |||||||| || |||||| |||||| | ||||||    
T  37038561 ggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtc 37038494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 36 - 190
Target Start/End: Original strand, 34012218 - 34012372
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| ||||||||| ||||||||| |||||||||||||  |||||||||||||| || |  |||||||||||||| ||||  |||||    
T  34012218 aatgatacatagacaccctttattctcgtacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 34012317  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| |||  |||||||| |||||||||| |||||||| || |||||||||||||    
T  34012318 ccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacct 34012372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 36 - 190
Target Start/End: Original strand, 504043 - 504197
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| ||||||||||||||||||| |||||||||||||  |||||||||||||| || |  |||||||| ||||| ||||  ||| |    
T  504043 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaagagaatgtgtgcttgtgcggggt 504142  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| |||  ||||||||||||||||||| ||||||||  | |||||| ||||||    
T  504143 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacct 504197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 31 - 173
Target Start/End: Original strand, 43414498 - 43414640
Alignment:
Q  31 aggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtat 130  Q
    |||||||||||||||||||||| ||||||  ||||||||||| |||||||||| ||  |||||||||||||| || |  |||||||||||||| ||||      
T  43414498 aggaaaatgttacatagacaccctttattgccatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 43414597  T
Q  131 gggatccacatgatcacgtgtcagatttttgtgtaggtgtcaa 173  Q
    ||||||||  ||| ||||||| |||||||||||| ||||||||    
T  43414598 gggatccatgtgaccacgtgttagatttttgtgtgggtgtcaa 43414640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 35 - 190
Target Start/End: Original strand, 40423864 - 40424019
Alignment:
Q  35 aaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatggga 134  Q
    ||||| |||||||||||| ||||||| ||||||||||| |||||| |||| |  |||||||||||||| || |  |||||||||||||| ||||  |||     
T  40423864 aaatgatacatagacaccttttattcccatacacccttgtacacctcatgtattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggg 40423963  T
Q  135 tccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||||||||  ||||||||||||||||||| | |||||| || |||||| ||||||    
T  40423964 tccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacct 40424019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 44 - 190
Target Start/End: Original strand, 1179870 - 1180016
Alignment:
Q  44 atagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggatccacatga 143  Q
    ||||||| | ||||||| |||| | |||| |||||||||||||  |||||||||||||| || |  |||||||||||||| ||||  || ||||||||||    
T  1179870 atagacatcctttattcccatatatccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggaatccacatga 1179969  T
Q  144 tcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
      ||||||||||||||||||| |||||||| || |||||||||||||    
T  1179970 ctacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacct 1180016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 36 - 190
Target Start/End: Complemental strand, 14548100 - 14547946
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| ||||||| |||||| |||| |||||||||||||  |||||||||||||| || |  |||||||||||||| ||||  ||| |    
T  14548100 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 14548001  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| |||  ||||||||||||||||||| ||||||||  | |||||| ||||||    
T  14548000 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacct 14547946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 36 - 190
Target Start/End: Original strand, 44507010 - 44507163
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| ||||||||||  |||||||||||||||||||| |||||||||||||  |||||||||||||| || |  ||||||||||| || ||||| ||| |    
T  44507010 aatgatacatagacat-atttattctcatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaagagaaagtatgcttgtacggggt 44507108  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| |||  ||||||||||||||||||| ||||| || |  |||||||||||||    
T  44507109 ccacgtgactacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacct 44507163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 36 - 173
Target Start/End: Original strand, 23122519 - 23122656
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| ||||||||||||||||||| |||||||||||||  |||||||||||| | || |  |||||||||||||| || |  ||| |    
T  23122519 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagagaacaggagagaaaagagaaagtgtgcttatgcggggt 23122618  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaa 173  Q
    |||| |||  ||||||||||||||||||| ||||||||    
T  23122619 ccacgtgactacgtgtcagatttttgtgtgggtgtcaa 23122656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 31 - 171
Target Start/End: Complemental strand, 42221698 - 42221558
Alignment:
Q  31 aggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtat 130  Q
    |||||||||||| ||| ||| | ||||||  ||||||||||| ||||||| ||  |   ||||||||||||| || ||||||||||||||||| ||||||    
T  42221698 aggaaaatgttatataaacatcctttatttacatacacccttgtacaccctatatatttggaagagagaagatgagatgaaagagaaagtgtgcttgtat 42221599  T
Q  131 gggatccacatgatcacgtgtcagatttttgtgtaggtgtc 171  Q
    ||| |||| ||||| ||||||||||||||||||| ||||||    
T  42221598 ggggtccatatgattacgtgtcagatttttgtgtgggtgtc 42221558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 35 - 183
Target Start/End: Original strand, 16056322 - 16056470
Alignment:
Q  35 aaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatggga 134  Q
    |||||||||||||||||| |||| |  ||||||||||| ||||||||||| |  ||||||||||||||  | | ||||||||||||||  ||||  |||     
T  16056322 aaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcgggg 16056421  T
Q  135 tccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtatt 183  Q
    |||| |||  ||| |||||||||||||||| |||||||| |||||||||    
T  16056422 tccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtatt 16056470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 36 - 190
Target Start/End: Complemental strand, 15197511 - 15197357
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||  ||||||| ||||||||||| |||||| ||||||   |||||||| |||| || |  |||||||||||||| ||||  ||| |    
T  15197511 aatgatacatagacactttttattcccatacacccttgtacacctcatgcatttggaagagaaaagaggagagaaaagagaaagtgtgcttgtgcggggt 15197412  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| |||  ||||||||||||||||||| |||||||| || |||||| ||||||    
T  15197411 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacct 15197357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 36 - 190
Target Start/End: Original strand, 24307715 - 24307869
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    ||||||||||||||||| |||| |  ||||||||||| ||||||||||| |  ||||||||||||||  | | ||||||||||||||  ||||  ||| |    
T  24307715 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggt 24307814  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    ||| |||  ||| | |||||||||||||| |||||||| ||||||||| ||||||    
T  24307815 ccatatggccacatatcagatttttgtgtgggtgtcaagggatgtattgccacct 24307869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 170
Target Start/End: Complemental strand, 9122363 - 9122229
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| ||||||||||   ||||||| ||||||| ||| |||||||||||||  |||||||||||||| || |  |||||||||||||| ||||  |||||    
T  9122363 aatgatacatagacattctttattcccatacactcttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 9122264  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgt 170  Q
    |||| |||  || |||||||||||||||| |||||    
T  9122263 ccacgtgactacatgtcagatttttgtgtgggtgt 9122229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 31 - 199
Target Start/End: Original strand, 15048098 - 15048266
Alignment:
Q  31 aggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaat-gaaagagaaagtgtgattgta 129  Q
    |||||||||||| ||||||||| |||||||  |||||||||| |||| ||||| ||  |||||||||||||| || ||  |||||||||||||| ||||     
T  15048098 aggaaaatgttatatagacaccctttattccgatacacccttgtacatcccatacattaggaagagagaagaggagataaaaagagaaagtgtgcttgtg 15048197  T
Q  130 tgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctgatgatgtc 199  Q
     ||| ||||  ||   ||||||||||||||||||| |||||||| || |||||| |||||| | ||||||    
T  15048198 cggggtccatgtggctacgtgtcagatttttgtgt-ggtgtcaaagggtgtattgccacctaaggatgtc 15048266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 34 - 164
Target Start/End: Complemental strand, 17444005 - 17443875
Alignment:
Q  34 aaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatggg 133  Q
    ||||||||||||||||||| |||||    ||||| |||| |||| | |||||||  |||||||||||||  | ||||||||||||||||  |||| ||||    
T  17444005 aaaatgttacatagacaccctttataagaatacatccttgtacaactcatgcactgggaagagagaagagaagatgaaagagaaagtgtctttgtgtggg 17443906  T
Q  134 atccacatgatcacgtgtcagatttttgtgt 164  Q
     |||||||||  || ||||||||||||||||    
T  17443905 gtccacatgactacatgtcagatttttgtgt 17443875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 32 - 190
Target Start/End: Complemental strand, 32032906 - 32032749
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    ||||||||||||||||||||| |||| |  ||||||||||| |||||| |||| |  ||||||||||||||  |   ||||||||||||||  ||||       
T  32032906 ggaaaatgttacatagacaccttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaaggagaaagagaaagtgtacttgtgca 32032807  T
Q  132 ggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    ||||||| |||  ||| |||||||||||||||| | |||||| ||||||||| ||||||    
T  32032806 ggatccatatggccacatgtcagatttttgtgtggatgtcaa-ggatgtattgccacct 32032749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 36 - 190
Target Start/End: Complemental strand, 34307394 - 34307240
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    ||||||||||||||||| |||| |  ||||||||||| ||||||||||  |  ||||||||||||||  | | ||||||||||||||  ||||  ||| |    
T  34307394 aatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggt 34307295  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
     || |||  ||| |||||||||||||||| |||||||| || |||||| ||||||    
T  34307294 tcatatgtccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacct 34307240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 32 - 199
Target Start/End: Original strand, 4854781 - 4854948
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    ||||||||||||||||||||  |||||||||||| |||||| |||| ||||| ||  || ||||||||||| || |  |||||||||||||| ||||       
T  4854781 ggaaaatgttacatagacactctttattctcatatacccttgtacatcccatacattagtaagagagaagaggagagaaaagagaaagtgtgcttgtgca 4854880  T
Q  132 ggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctgatgatgtc 199  Q
    || ||||  ||  ||| | |||||||||| ||||||||| || || |||||| |||||| | ||||||    
T  4854881 gggtccatgtggccacatatcagatttttatgtaggtgttaaagggtgtattgccacctaaggatgtc 4854948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 32 - 123
Target Start/End: Original strand, 32707921 - 32708012
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtg 123  Q
    ||||||||||||||||||||| |||| |  ||||||||||| ||||||||||| |  ||||||||||||||  | | |||||||||||||||    
T  32707921 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtg 32708012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 28 - 183
Target Start/End: Original strand, 15258843 - 15258998
Alignment:
Q  28 ataaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattg 127  Q
    ||||||||||||||||||||||||| ||||||  |||||||  || |||| || ||   | |||||||||||||| || | |||||||||| |||| |||    
T  15258843 ataaggaaaatgttacatagacaccctttatttccatacacttttgtacatcctatattctaggaagagagaagaggagaggaaagagaaaatgtgcttg 15258942  T
Q  128 tatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtatt 183  Q
    |   || ||||| ||| ||| |||||||||||| ||| | |||| | |||||||||    
T  15258943 tgcagggtccacgtgaccacatgtcagatttttatgtggatgtccagggatgtatt 15258998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 89 - 199
Target Start/End: Original strand, 10621062 - 10621172
Alignment:
Q  89 aggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccac 188  Q
    |||||||||||||| || |  |||||||||||||| ||||  |||||| |  ||   ||||||||||||||||||| |||||||| || |||||||||||    
T  10621062 aggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatcgatgtggctacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccac 10621161  T
Q  189 ctgatgatgtc 199  Q
    || | ||||||    
T  10621162 ctaaggatgtc 10621172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 162
Target Start/End: Original strand, 30183790 - 30183923
Alignment:
Q  28 ataaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattg 127  Q
    ||||||||||||||| ||||||| | ||||||  ||||||| ||| ||||||||||  |   |||||| |||||| | |||||||||||||||||| ||     
T  30183790 ataaggaaaatgttagatagacatcctttatttacatacactcttgtacaccccatatatttggaagaaagaagatg-aatgaaagagaaagtgtgctta 30183888  T
Q  128 tatgggatccacatgatcacgtgtcagatttttgt 162  Q
    ||||   |||| ||||| |||| ||||||||||||    
T  30183889 tatgaagtccatatgattacgtatcagatttttgt 30183923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 121
Target Start/End: Original strand, 42710216 - 42710301
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtg 121  Q
    |||| |||| ||||||| ||||||| ||||||||||| |||||||||| ||  |||||||||||||| || |  ||||||||||||    
T  42710216 aatgatacacagacaccctttattcccatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtg 42710301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 190
Target Start/End: Complemental strand, 16383517 - 16383401
Alignment:
Q  74 tacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaa 173  Q
    ||||||||||| |  ||||||||||||||  | | ||||||||||||||  ||||  ||| |||| |||  ||| |||||||||||||||| ||||||||    
T  16383517 tacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaa 16383418  T
Q  174 tggatgtattaccacct 190  Q
     || |||||| ||||||    
T  16383417 ggggtgtattgccacct 16383401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 128
Target Start/End: Complemental strand, 40467882 - 40467786
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgt 128  Q
    ||||||||||||||||||||| ||||| | |||| |   || ||||||||||  || |||||||||||||| || | ||||||||||||||| ||||    
T  40467882 ggaaaatgttacatagacaccttttatccccataaatttttgtacaccccatagactaggaagagagaagatgagaggaaagagaaagtgtgcttgt 40467786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 36 - 122
Target Start/End: Original strand, 30479396 - 30479482
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgt 122  Q
    ||||||||||||||||| |||| |  ||||||||||| |||||| |||| |  ||||||||||||||  | | ||||||||||||||    
T  30479396 aatgttacatagacaccttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgt 30479482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 190
Target Start/End: Complemental strand, 24307692 - 24307653
Alignment:
Q  151 tcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||||||||||||| |||||||||||||||||| ||||||    
T  24307692 tcagatttttgtgtgggtgtcaatggatgtattgccacct 24307653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 69
Target Start/End: Original strand, 20074869 - 20074907
Alignment:
Q  31 aggaaaatgttacatagacaccatttattctcatacacc 69  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  20074869 aggaaaatgttacatagacacattttattctcatacacc 20074907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 4e-40; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 32 - 199
Target Start/End: Complemental strand, 41423864 - 41423697
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    ||||||||||||||| ||||| |||||||||||||||| || |||||||||||||| |||||||||||||| || |||||||||||| | || ||||| |    
T  41423864 ggaaaatgttacataaacaccctttattctcatacacctttgtacaccccatgcactaggaagagagaagaggagatgaaagagaaaatatgcttgtacg 41423765  T
Q  132 ggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctgatgatgtc 199  Q
    ||||| || ||| ||| ||||||||||||||||| |||||||  | |||||||||| || ||||||||    
T  41423764 ggatctacgtgaccacatgtcagatttttgtgtaagtgtcaagaggtgtattaccatctaatgatgtc 41423697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 33 - 183
Target Start/End: Original strand, 16374743 - 16374893
Alignment:
Q  33 gaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgg 132  Q
    |||||||||||||||||||| |||||||||||||||| || ||||| |||| ||  |||||||||||| | || ||||||||||| ||||| |||| ||     
T  16374743 gaaaatgttacatagacaccctttattctcatacacctttgtacactccatacattaggaagagagaaaaagagatgaaagagaatgtgtgcttgtgtga 16374842  T
Q  133 gatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtatt 183  Q
    ||||||| ||| |||||||||||||||||||| | |||||| |||||||||    
T  16374843 gatccacgtgaccacgtgtcagatttttgtgtggatgtcaagggatgtatt 16374893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 35523060 - 35522920
Alignment:
Q  30 aaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgta 129  Q
    ||||||||||||||||| ||||||||||||| ||||||||||| |||||||||| ||  |||||||||||||| || |  |||||||||||||| ||||     
T  35523060 aaggaaaatgttacataaacaccatttattcccatacacccttgtacaccccatacattaggaagagagaagaagagagaaaagagaaagtgtgcttgtg 35522961  T
Q  130 tgggatccacatgatcacgtgtcagatttttgtgtaggtgt 170  Q
     |||||||| |||  |||||||||||||||||||| |||||    
T  35522960 cgggatccatatggccacgtgtcagatttttgtgtgggtgt 35522920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 36 - 199
Target Start/End: Complemental strand, 19330020 - 19329857
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| ||||||| ||||||||||| |||||||||||||  |||||||||||||| || |  |||||||||||||| ||||  ||| |    
T  19330020 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 19329921  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctgatgatgtc 199  Q
    |||| |||| ||||||||||||||||||| ||||||||  | |||||| |||||| | ||||||    
T  19329920 ccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtc 19329857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 36 - 190
Target Start/End: Original strand, 8080305 - 8080459
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| ||||||| ||||||||||| |||||||||||||  |||||||||||||| || |  |||||||||||||| ||||  ||| |    
T  8080305 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcaataggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 8080404  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| |||  ||||||||||||||| |||||||||||| || |||||| ||||||    
T  8080405 ccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacct 8080459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 36 - 173
Target Start/End: Original strand, 4999436 - 4999573
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| ||||||||||||||||||| |||||||||||||  |||||||||||||| || || |||||||||||||| ||||  ||| |    
T  4999436 aatgatacatagacaccttttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagataaaagagaaagtgtgtttgtgcggggt 4999535  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaa 173  Q
    |||| |||  |||| |||||||||||||| ||||||||    
T  4999536 ccacgtgactacgtatcagatttttgtgtgggtgtcaa 4999573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 36 - 190
Target Start/End: Complemental strand, 40957885 - 40957731
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| ||||||||||||  ||||| |||||||||||| |||||||||||||  |||||||||||||| || |  |||||||||||||| ||||| |||||    
T  40957885 aatgatacatagacacccattattttcatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacgggat 40957786  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| |||  ||||||||||||||||||| ||| |||| |  |||||| ||||||    
T  40957785 ccacgtgactacgtgtcagatttttgtgtgggtatcaaagagtgtattgccacct 40957731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 41 - 173
Target Start/End: Original strand, 19436114 - 19436246
Alignment:
Q  41 tacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggatccaca 140  Q
    |||||||||||||||||||||||||||||||| |||||||||||||  ||||||||| ||||  | |  |||||||||||||| || |  |||||||||     
T  19436114 tacatagacaccatttattctcatacacccttgtacaccccatgcattaggaagagaaaagagaagagaaaagagaaagtgtgcttatgcgggatccacg 19436213  T
Q  141 tgatcacgtgtcagatttttgtgtaggtgtcaa 173  Q
    |||  ||||||||||||||||||| ||||||||    
T  19436214 tgactacgtgtcagatttttgtgtgggtgtcaa 19436246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 43 - 190
Target Start/End: Complemental strand, 35137704 - 35137557
Alignment:
Q  43 catagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggatccacatg 142  Q
    |||||| ||||||| ||||||||||||||| |||| ||||||||  |||||||||||||| || |  |||||||||||||| ||||  ||| ||||| ||    
T  35137704 catagataccatttgttctcatacacccttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgtttgtgcggggtccacgtg 35137605  T
Q  143 atcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |  |||||| |||||||||||| |||||||| || |||||| ||||||    
T  35137604 actacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacct 35137557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 32 - 183
Target Start/End: Original strand, 35468773 - 35468924
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    ||||||||||||||| ||||| |||||||||||||| ||||||||| | |||| || |||||||||||||| || | ||||||||||||||| ||||       
T  35468773 ggaaaatgttacatatacaccttttattctcatacatccttatacatctcatgaactaggaagagagaagaggataggaaagagaaagtgtgtttgtgca 35468872  T
Q  132 ggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtatt 183  Q
    || |||||||| |||| | | |||||||| ||| ||||||||  ||||||||    
T  35468873 gggtccacatggtcacatattagatttttatgtgggtgtcaaatgatgtatt 35468924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 32 - 190
Target Start/End: Complemental strand, 22343543 - 22343385
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    ||||||||||||||||||||| |||| |  ||||||||||| |||||| |||| |  ||||||||||||||  | | ||||||||||||||  ||||  |    
T  22343543 ggaaaatgttacatagacaccttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 22343444  T
Q  132 ggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    || |||| ||| |||| |||||||||||||||| |||||||| || |||||| ||||||    
T  22343443 gggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacct 22343385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 36 - 170
Target Start/End: Complemental strand, 38837395 - 38837261
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| ||||||  ||||||||||| |||| ||||||||  |||||||||||||| || |  |||||||||||||| ||||  ||| |    
T  38837395 aatgatacatagacaccctttatttccatacacccttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 38837296  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgt 170  Q
    |||| |||  |||||||||||||||||||||||||    
T  38837295 ccacgtgactacgtgtcagatttttgtgtaggtgt 38837261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 54 - 190
Target Start/End: Complemental strand, 3784155 - 3784019
Alignment:
Q  54 tttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtca 153  Q
    ||||||| ||||||  ||| |||||||||||||  |||||||||||||| || |  |||||||||||||| ||||  ||||||||| |||  ||||||||    
T  3784155 tttattcacatacattcttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtca 3784056  T
Q  154 gatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    ||||||||||| ||||||||  |||||||| ||||||    
T  3784055 gatttttgtgtgggtgtcaaaagatgtattgccacct 3784019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 30 - 190
Target Start/End: Complemental strand, 8238397 - 8238237
Alignment:
Q  30 aaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgta 129  Q
    |||||||||||||||||||| || |||| |  ||||||||||| ||||||||||| |  ||||||||||||||  | | ||||||||||||||  ||||     
T  8238397 aaggaaaatgttacatagacgccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtg 8238298  T
Q  130 tgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
     ||| |||| ||||  || |||||||||||||||| |||||||| || |||||| ||||||    
T  8238297 cggggtccatatgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacct 8238237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 34 - 190
Target Start/End: Complemental strand, 41915921 - 41915765
Alignment:
Q  34 aaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatggg 133  Q
    ||||||||||||||||||| |||| |  ||||||||||| ||||||||||  |  ||||||||||||||  | | ||||||||||||||  ||||  |||    
T  41915921 aaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggg 41915822  T
Q  134 atccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
     |||| |||  ||| ||||||||||||||||||||||||| || |||||| ||||||    
T  41915821 gtccatatggccacatgtcagatttttgtgtaggtgtcaaggggtgtattgccacct 41915765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 36 - 183
Target Start/End: Original strand, 32951415 - 32951562
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| ||||||||||||  |||||||||||||||||| ||||||||||| |  |||||||||||||| || |  |||||||||||||| ||||  ||| |    
T  32951415 aatgatacatagacaccccttattctcatacacccttgtacaccccatgtattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 32951514  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtatt 183  Q
    |||| |||  |||||| |||||||||||| | ||| || |||||||||    
T  32951515 ccacgtgactacgtgttagatttttgtgtggatgttaaaggatgtatt 32951562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 32 - 190
Target Start/End: Original strand, 46033719 - 46033877
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||  ||||| |||||||| || |  ||||||||| | || ||||  |    
T  46033719 ggaaaatgttacatagacaccatttattctcatacacccttgtacaccccatacattaggaatagagaagaggagagaaaagagaaaatatgcttgtgcg 46033818  T
Q  132 ggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |  | ||  ||| |||||||||||||||| ||| ||||| || || |||||| ||||||    
T  46033819 gagttcatgtgaccacgtgtcagatttttatgtgggtgttaaagggtgtattgccacct 46033877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 36 - 190
Target Start/End: Complemental strand, 36362192 - 36362050
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| ||||||||||||||||||| |||| |||||| |  |||||||||            |||||||||||||| |||| |||| |    
T  36362192 aatgatacatagacaccctttattctcatacacccttgtacatcccatgtattaggaagaga------------aaagagaaagtgtgcttgtgtggggt 36362105  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| |||  ||||||||||||||||||| |||||||| ||||||||||||||||    
T  36362104 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattaccacct 36362050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 29 - 162
Target Start/End: Original strand, 39255839 - 39255971
Alignment:
Q  29 taaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgt 128  Q
    |||| ||||||||||||||||||| |||||| |||||||||||| ||||  | || |||| ||||||||||||| || ||||||||||||||||  ||||    
T  39255839 taagaaaaatgttacatagacaccctttattatcatacacccttgtacattctatccaccgggaagagagaagaggagatgaaagagaaagtgttcttgt 39255938  T
Q  129 atgggatccacatgatcacgtgtcagatttttgt 162  Q
     |||  ||||| ||  ||||||||||||||||||    
T  39255939 gtggagtccacgtg-ccacgtgtcagatttttgt 39255971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 34 - 190
Target Start/End: Complemental strand, 18207359 - 18207204
Alignment:
Q  34 aaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatggg 133  Q
    ||||||||| ||||| ||| |||||| |||||||||||| ||||| | || ||| |||||||||||||| || ||||||||||||||||| |||| ||||    
T  18207359 aaaatgttagatagataccctttattatcatacacccttgtacactctatccactaggaagagagaagaggagatgaaagagaaagtgtgcttgtgtggg 18207260  T
Q  134 atccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
     | ||| ||  ||||||| |||||||||| | ||||||||  | |||||| ||||||    
T  18207259 gttcacgtg-ccacgtgttagatttttgtatgggtgtcaagaggtgtattgccacct 18207204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 29 - 173
Target Start/End: Original strand, 27744224 - 27744368
Alignment:
Q  29 taaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgt 128  Q
    |||||||||||||| ||| ||||||||||||| |||| | |||| |||| ||||||||| |||||||||||||| || | || ||||||| |||| || |    
T  27744224 taaggaaaatgttatataaacaccatttattcccatatatccttgtacatcccatgcactaggaagagagaagaggagaggatagagaaaatgtgcttat 27744323  T
Q  129 atgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaa 173  Q
      ||||||||| ||  ||| |||||||||||||||| ||| ||||    
T  27744324 gagggatccacgtggccacatgtcagatttttgtgtgggtatcaa 27744368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 36 - 199
Target Start/End: Complemental strand, 3434730 - 3434577
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| ||||||| |||||| |||| |||||||||||||  ||||||||||||          ||||||||||||| ||||  |||||    
T  3434730 aatgatacatagacaccctttattcccatacagccttgtacaccccatgcattaggaagagagaa----------aagagaaagtgtgcttgtgcgggat 3434641  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctgatgatgtc 199  Q
    |||| |||  ||||||||| ||||||||| |||||||| || |||||| |||||| | ||||||    
T  3434640 ccacgtgactacgtgtcagttttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtc 3434577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 62 - 170
Target Start/End: Complemental strand, 3694519 - 3694411
Alignment:
Q  62 catacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttg 161  Q
    ||||||| ||| |||||||||||||   ||||||||||||| || |  |||||||||||||| ||||  |||||||||||||  ||||||||||||||||    
T  3694519 catacactcttgtacaccccatgcattgggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacatgactacgtgtcagatttttg 3694420  T
Q  162 tgtaggtgt 170  Q
    ||| |||||    
T  3694419 tgtgggtgt 3694411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 31 - 138
Target Start/End: Complemental strand, 31736060 - 31735953
Alignment:
Q  31 aggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtat 130  Q
    |||||||||||| ||||| ||| ||||||| ||||||||||| |||||||||| ||  |||||||||||||| || |  |||||||||||||| ||||      
T  31736060 aggaaaatgttagatagataccttttattcccatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 31735961  T
Q  131 gggatcca 138  Q
    ||||||||    
T  31735960 gggatcca 31735953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 36 - 183
Target Start/End: Complemental strand, 38267218 - 38267071
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||| | ||||||||  |||||||| |  |||| ||||||||  |||||||||||||| || |  |||||||||||||| ||||  ||| |    
T  38267218 aatgatacatagatatcatttatttccatacaccttcgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 38267119  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtatt 183  Q
    |||| |||  ||||||||||||||||||| |||||||| || ||||||    
T  38267118 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtatt 38267071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 32 - 190
Target Start/End: Complemental strand, 38044379 - 38044221
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    ||||||||||||||||||||| |||| |  ||||||||||| ||||||||||| |  ||||||||| ||||  | | ||||||||||||||  ||||  |    
T  38044379 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagaaaagagaagaagaaagagaaagtgtacttgtgcg 38044280  T
Q  132 ggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    || |||| |||   || |||||||||||||||| | |||||| || |||||| ||||||    
T  38044279 gggtccatatggctacatgtcagatttttgtgtggatgtcaaggggtgtattgccacct 38044221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 46374741 - 46374807
Alignment:
Q  31 aggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagaga 97  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||  |||||||||    
T  46374741 aggaaaatgttacatagacaccatttattcccatacacccttgtacaccccatacattaggaagaga 46374807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 190
Target Start/End: Complemental strand, 36208306 - 36208197
Alignment:
Q  81 catgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgt 180  Q
    ||||||| |||||||||||||| || | |||||||||| |||| ||||   || ||||| ||| ||| |||||| ||||||||| |||||||||| ||||    
T  36208306 catgcactaggaagagagaagaggagaggaaagagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagctttttgtgtgggtgtcaatgaatgt 36208207  T
Q  181 attaccacct 190  Q
    ||||||||||    
T  36208206 attaccacct 36208197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 190
Target Start/End: Original strand, 36361847 - 36361989
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| ||||||||||||||||||| ||||  ||||| |  |||||||||            |||||||||||||| |||| |||| |    
T  36361847 aatgatacatagacaccctttattctcatacacccttgtacattccatgtattaggaagaga------------aaagagaaagtgtgcttgtgtggggt 36361934  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| |||  ||||||||||||||||||| |||||||| ||||||||| ||||||    
T  36361935 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacct 36361989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 31 - 98
Target Start/End: Complemental strand, 21234584 - 21234517
Alignment:
Q  31 aggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagag 98  Q
    |||||||||||||||||||||| |||||||||||||||| || |||||||||| ||  ||||||||||    
T  21234584 aggaaaatgttacatagacaccttttattctcatacaccattgtacaccccatacattaggaagagag 21234517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 190
Target Start/End: Complemental strand, 7389566 - 7389413
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||| | ||||||| ||||||||||  ||||||||||| |  |||||||||||  | || |  |||||||||||||| ||||  ||| |    
T  7389566 aatgatacatagacatcctttattcccatacaccctg-tacaccccatgtattaggaagagagagtaggagagaaaagagaaagtgtgcttgtgcggggt 7389468  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| |||  ||||||||||||||||||| |||||||| |  |||||| ||||||    
T  7389467 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacct 7389413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 190
Target Start/End: Original strand, 32564342 - 32564502
Alignment:
Q  30 aaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgta 129  Q
    |||||| ||||||||||||||   |||| |  ||||||||||| |||||| |||| |  ||||||||||||||  | | ||||||||||||||  ||||     
T  32564342 aaggaagatgttacatagacatattttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtatttgtg 32564441  T
Q  130 tgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
     ||| |||| ||   ||| |||||||||||||||| |||||||| || |||||| ||||||    
T  32564442 cggggtccatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacct 32564502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 173
Target Start/End: Original strand, 2318160 - 2318302
Alignment:
Q  33 gaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccag-ga-agagagaagacgaaatgaaagagaaagtgtgattgtat 130  Q
    |||||||||||||||||||  ||||||  |||||||| || ||||| |||||||  || || |||||||||| || |||||||||||||| || || | |    
T  2318160 gaaaatgttacatagacacactttatttccatacacctttgtacactccatgcattagagagagagagaagatgagatgaaagagaaagtatgcttatgt 2318259  T
Q  131 gggatccacatgatcacgtgtcagatttttgtgtaggtgtcaa 173  Q
     || ||||| ||| |||  ||||||||||||||| ||||||||    
T  2318260 cgggtccacgtgaccacacgtcagatttttgtgtgggtgtcaa 2318302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 122
Target Start/End: Complemental strand, 11044356 - 11044270
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgt 122  Q
    |||| |||||||||||  |||||| ||||||||| || |||||| ||||||  |||||||||||||| || | ||||||||||||||    
T  11044356 aatgatacatagacactctttattttcatacacctttgtacacctcatgcattaggaagagagaagatgagaggaaagagaaagtgt 11044270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 162
Target Start/End: Complemental strand, 12311086 - 12310956
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    ||||||||||||||||||||| ||||||  |||||||| || |||| |   |  || |||||||||||||| |||| |||||| ||| |||| ||||       
T  12311086 ggaaaatgttacatagacaccctttatttccatacacctttgtacatcttgtatactaggaagagagaagaggaaaggaaagataaaatgtgcttgttca 12310987  T
Q  132 ggatccacatgatcacgtgtcagatttttgt 162  Q
    |||||||| ||| ||| ||||||||||||||    
T  12310986 ggatccacgtgaccacatgtcagatttttgt 12310956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 190
Target Start/End: Complemental strand, 7728086 - 7727930
Alignment:
Q  34 aaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatggg 133  Q
    ||||||||||||||||||| |||| |  |||||| |||| ||||||||||  |  ||||||||||||||  | | |||| |||||||||  ||||  |||    
T  7728086 aaaatgttacatagacaccttttaattgcatacatccttgtacaccccatatattaggaagagagaagagaagaagaaacagaaagtgtacttgtgcggg 7727987  T
Q  134 atccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
     |||| |||| ||| |||||||||||| |||   ||||||  | |||||||||||||    
T  7727986 gtccatatgaccacatgtcagatttttatgtgaatgtcaagaggtgtattaccacct 7727930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 132
Target Start/End: Original strand, 1766702 - 1766799
Alignment:
Q  35 aaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgg 132  Q
    |||||||||||||||||  ||| |||||||| || ||| || ||| |||  || | |||||||||||| || | ||||||||||||||| ||||||||    
T  1766702 aaatgttacatagacacactttgttctcatatactcttgtatacctcatatactacgaagagagaagaggagaggaaagagaaagtgtgcttgtatgg 1766799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 160
Target Start/End: Complemental strand, 26296826 - 26296698
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    |||||||||||| |||||||||| ||||  ||||||||||| |||||| ||| ||  | |||||||||||| || |  ||||||||| || | ||||  |    
T  26296826 ggaaaatgttacgtagacaccatatatttccatacacccttgtacacctcatacattaagaagagagaagaggagagaaaagagaaaatgcgcttgtgcg 26296727  T
Q  132 ggatccacatgatcacgtgtcagattttt 160  Q
    || |||| |||  ||||| ||||||||||    
T  26296726 gggtccatatggccacgtatcagattttt 26296698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 166
Target Start/End: Complemental strand, 45223222 - 45223090
Alignment:
Q  34 aaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatggg 133  Q
    ||||||| ||||||||| | ||||||  |||||| | || ||||||||||  |   | ||||||||||| || |||||||||||| || | ||||||| |    
T  45223222 aaaatgtcacatagacatcctttatttacatacatctttgtacaccccatatatttgaaagagagaagatgagatgaaagagaaaatgcgcttgtatgag 45223123  T
Q  134 atccacatgatcacgtgtcagatttttgtgtag 166  Q
     |  | ||||| |||||||||||||||||||||    
T  45223122 gttaatatgattacgtgtcagatttttgtgtag 45223090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 4e-40; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 32 - 199
Target Start/End: Original strand, 14623757 - 14623924
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||| ||||||| || |||||||||||  | ||||||||||||||||| |||| ||    
T  14623757 ggaaaatgttacatagacaccatttattctcatacatccttctacacctcatgcactagaaagagagaagagaagatgaaagagaaagtgtgcttgtgtg 14623856  T
Q  132 ggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctgatgatgtc 199  Q
     | ||||||||| ||| |||||||||||| ||| |||||||| || |||||| |||||| | ||||||    
T  14623857 aggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtc 14623924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 30 - 173
Target Start/End: Complemental strand, 35536810 - 35536667
Alignment:
Q  30 aaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgta 129  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||  | ||||||||| ||||||| ||||     
T  35536810 aaggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactaggaagagagaagagaagatgaaagaggaagtgtgcttgtg 35536711  T
Q  130 tgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaa 173  Q
    |  | ||||||||| ||||||||| |||||| ||| ||||||||    
T  35536710 taaggtccacatgaccacgtgtcacatttttatgtgggtgtcaa 35536667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 30 - 199
Target Start/End: Original strand, 20764831 - 20765000
Alignment:
Q  30 aaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgta 129  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||  |||||||||||||| || |  |||||||||||||| |||||    
T  20764831 aaggaaaatgttacatagacaccatttattctcatacacccttgtacaccccatacattaggaagagagaagatgagagaaaagagaaagtgtgcttgta 20764930  T
Q  130 tgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctgatgatgtc 199  Q
     ||| ||||  ||  |||||||||||||||||||| ||||| || |  ||||||||||||| | ||||||    
T  20764931 cggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaaggatgtc 20765000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 31 - 190
Target Start/End: Complemental strand, 8076576 - 8076417
Alignment:
Q  31 aggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtat 130  Q
    ||||||||||||||||||||||||||||||||||||||  || |||||||||||||| |||||||||||||| || | ||||||||||||||| ||||      
T  8076576 aggaaaatgttacatagacaccatttattctcatacacttttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgc 8076477  T
Q  131 gggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    ||| ||||| |||  |||||| |||||||||||| |||||||| || |||| | ||||||    
T  8076476 ggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacct 8076417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 188
Target Start/End: Complemental strand, 8956949 - 8956788
Alignment:
Q  27 tataaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgatt 126  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||| |||||||  ||||| ||||||||||||||  | ||||||||| ||||||| ||    
T  8956949 tatatggaaaatgttacatagacagcatttattctcatacacccttctacaccctgtgcactaggaagagagaagagaagatgaaagaggaagtgtgctt 8956850  T
Q  127 gtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccac 188  Q
    || |  | ||||||||| ||||||||| |||||| ||| |||||||| ||||||||| ||||    
T  8956849 gtgtaaggtccacatgaacacgtgtcacatttttatgtgggtgtcaaaggatgtattgccac 8956788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 34 - 190
Target Start/End: Original strand, 13897975 - 13898131
Alignment:
Q  34 aaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatggg 133  Q
    ||||||||| |||||||||||||||||||||||||  || |||||||||| ||| ||| ||||||||||  | ||||||||||||||||| |||| || |    
T  13897975 aaaatgttagatagacaccatttattctcatacacttttctacaccccatacactagggagagagaagagaagatgaaagagaaagtgtgcttgtgtgag 13898074  T
Q  134 atccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
     ||||||||| |||||||||||||||| ||| |||||||| || |||||| ||||||    
T  13898075 gtccacatgaacacgtgtcagatttttatgtgggtgtcaaggggtgtattgccacct 13898131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 30 - 190
Target Start/End: Original strand, 30801649 - 30801809
Alignment:
Q  30 aaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgta 129  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| || |||||||||||||| || | |||||||||| |||| ||||     
T  30801649 aaggaaaatgttacatagacaccttttattctcatacacccttgtacaccccatgtactaggaagagagaagatgagaggaaagagaaaatgtgcttgtg 30801748  T
Q  130 tgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| |||| ||||  || ||||| |||||||||| ||| |||| || ||||||| |||||    
T  30801749 tggggtccatatgactacatgtcatatttttgtgtgggtatcaaagggtgtattatcacct 30801809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 36 - 189
Target Start/End: Complemental strand, 33644378 - 33644225
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| ||||||| |||||||||||||||||||||||||  |||||||||||||| || |  |||||||||||||| ||||  ||| |    
T  33644378 aatgatacatagacaccctttattcccatacacccttatacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 33644279  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacc 189  Q
    |||| |||  ||||||||||||||||||| |||||||| || |||||| |||||    
T  33644278 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacc 33644225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 36 - 190
Target Start/End: Complemental strand, 49607592 - 49607438
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| ||||||| ||||||||||| |||||  ||||||  ||||||||| |||| || |  |||||||||||||| |||| ||||||    
T  49607592 aatgatacatagacaccctttattcccatacacccttgtacacgtcatgcattaggaagagaaaagaggagagaaaagagaaagtgtgcttgtgtgggat 49607493  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| |||  ||||||||||||||||||| |||||||| || |||||| ||||||    
T  49607492 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacct 49607438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 36 - 190
Target Start/End: Complemental strand, 53982189 - 53982035
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| ||||||| |||||| |||| |||||||||||||  |||||||||||||| || |  |||||||||||||| ||||  ||| |    
T  53982189 aatgatacatagacaccctttattcccatacaaccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 53982090  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| |||  ||||||||||||||||||| |||||||| || |||||| ||||||    
T  53982089 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacct 53982035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 36 - 190
Target Start/End: Complemental strand, 52629478 - 52629324
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| ||||||||||||  |||||  ||||||||||| |||| ||||||||  |||||||||||||| || |  |||||||||||||| ||||| ||| |    
T  52629478 aatgatacatagacacccattatttccatacacccttgtacatcccatgcattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacggggt 52629379  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| |||  ||||||||||||||||||| |||||||| || |||||| ||||||    
T  52629378 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacct 52629324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 31 - 183
Target Start/End: Original strand, 33118767 - 33118920
Alignment:
Q  31 aggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaa-gacgaaatgaaagagaaagtgtgattgta 129  Q
    ||||||||||||| |||||||| ||||||  ||||||||||| |||||||||||||| ||| |||||||| || || | ||||||||||||||| || |     
T  33118767 aggaaaatgttacgtagacaccctttatttccatacacccttgtacaccccatgcactagggagagagaaggaggagaggaaagagaaagtgtgtttctg 33118866  T
Q  130 tgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtatt 183  Q
     ||||||||| |||  |||||||| |||||||||| |||||||| || ||||||    
T  33118867 agggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtatt 33118920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 30 - 199
Target Start/End: Original strand, 26141446 - 26141617
Alignment:
Q  30 aaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagaga--gaagacgaaatgaaagagaaagtgtgattg 127  Q
    ||||||||||||||||||||||| ||||||  ||||||| ||| |||||||||| ||  |||||||||  ||||| || |  |||||||||||||| |||    
T  26141446 aaggaaaatgttacatagacaccctttatttccatacactcttgtacaccccatacattaggaagagaaagaagaggagagaaaagagaaagtgtgcttg 26141545  T
Q  128 tatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctgatgatgtc 199  Q
    | |||| ||||  ||| |||||||||||||||||||| ||||| || || |||||| |||||| | ||||||    
T  26141546 tgtggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtc 26141617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 32 - 183
Target Start/End: Original strand, 11347840 - 11347991
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    |||||||| |||||||||||| ||||||| |||||||||||||||||||||| ||  |||||||||||||| || |  |||||||||||||| || |       
T  11347840 ggaaaatggtacatagacaccctttattcccatacacccttatacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttatgca 11347939  T
Q  132 ggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtatt 183  Q
    || ||||  ||  |||||||||||||||||||| | |||||| |||||||||    
T  11347940 gggtccatgtggccacgtgtcagatttttgtgtggatgtcaaaggatgtatt 11347991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 36 - 183
Target Start/End: Complemental strand, 31456867 - 31456720
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||| ||||| ||||||| ||| ||||||| |||||||||||||  ||||||||| |||| || |  |||||||||||||| ||||  ||| |    
T  31456867 aatgatacataaacaccctttattcccatgcacccttgtacaccccatgcattaggaagagaaaagaggagagaaaagagaaagtgtgcttgtgcggggt 31456768  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtatt 183  Q
    ||||||||  ||||||||||||||||||| |||||||| || ||||||    
T  31456767 ccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtatt 31456720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 36 - 170
Target Start/End: Complemental strand, 17470583 - 17470449
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||||||||||||||||||   || |||| ||||||||  |||||||||||||| || |  |||||||||||||| |||| |||| |    
T  17470583 aatgatacatagacaccatttattctcatacatatttgtacatcccatgcattaggaagagagaagatgagagaaaagagaaagtgtgcttgtgtggggt 17470484  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgt 170  Q
    |||| |||  ||||||||||||||||||| |||||    
T  17470483 ccacgtgactacgtgtcagatttttgtgtgggtgt 17470449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 36 - 190
Target Start/End: Original strand, 54868817 - 54868971
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| ||||||  ||||||||||| ||||||| |||||  |||||||||||||| || |  |||||||||||||||||||  ||| |    
T  54868817 aatgatacatagacaccttttatttccatacacccttgtacaccctatgcattaggaagagagaagatgagagaaaagagaaagtgtgattgtgcggggt 54868916  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| | |  ||||||||||||||||||| ||||||||  | |||||| ||||||    
T  54868917 ccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacct 54868971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 32 - 161
Target Start/End: Complemental strand, 35093767 - 35093638
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    |||||||||||| |||||| |||||||||||||||||| || |||| | ||||||| |||||||||||| |  | ||| ||||||||||||| |||||||    
T  35093767 ggaaaatgttacctagacatcatttattctcatacacctttgtacatctcatgcactaggaagagagaaaaaaagatgcaagagaaagtgtgcttgtatg 35093668  T
Q  132 ggatccacatgatcacgtgtcagatttttg 161  Q
    |  | ||||||| ||| |||||||||||||    
T  35093667 gagttcacatgaccacatgtcagatttttg 35093638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 30 - 173
Target Start/End: Original strand, 24699871 - 24700013
Alignment:
Q  30 aaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgta 129  Q
    ||||||||||||||||||||| | |||||||||||||| | ||||||||| |||  || |||||||||||||| || | ||||||||||||||| |||||    
T  24699871 aaggaaaatgttacatagacatcttttattctcatacatc-ttatacacctcataaactaggaagagagaagaggagaggaaagagaaagtgtgtttgta 24699969  T
Q  130 tgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaa 173  Q
      || ||||| ||  |||||| ||||||||| ||| ||||||||    
T  24699970 cagggtccacgtggccacgtgccagatttttatgtgggtgtcaa 24700013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 29 - 183
Target Start/End: Original strand, 51419275 - 51419429
Alignment:
Q  29 taaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgt 128  Q
    |||||||||||||||||| ||||| ||||||  ||||||||||| |||||||||| ||  |||||||||||| | || |  |||||||||||||| ||||    
T  51419275 taaggaaaatgttacataaacaccttttatttccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgt 51419374  T
Q  129 atgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtatt 183  Q
      ||| || |  ||  |||||||||||||||||||| ||||| || |||||||||    
T  51419375 gcggggtctatgtggccacgtgtcagatttttgtgtgggtgttaaaggatgtatt 51419429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 32 - 160
Target Start/End: Original strand, 25407065 - 25407193
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    ||||||||||| |||| |||| |||||||| ||| |   |||||||||  || ||  ||  |||||||||| || ||||||||||||||||| |||| ||    
T  25407065 ggaaaatgttatatagtcaccctttattcttatatatatttatacaccttatacattagtgagagagaagaggagatgaaagagaaagtgtgtttgtgtg 25407164  T
Q  132 ggatccacatgatcacgtgtcagattttt 160  Q
    ||||||| |||||||||||||||||||||    
T  25407165 ggatccatatgatcacgtgtcagattttt 25407193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 30 - 190
Target Start/End: Original strand, 41189680 - 41189840
Alignment:
Q  30 aaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgta 129  Q
    ||||||||||||||||||||||| ||||||  ||||||| ||| ||||| |||| ||  ||||||| |||||| || |  |||||||||||||| ||||     
T  41189680 aaggaaaatgttacatagacaccctttatttccatacactcttgtacactccatacattaggaagaaagaagaggagagaaaagagaaagtgtgcttgtg 41189779  T
Q  130 tgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
     ||| ||||  ||  ||||||||| |||||| ||| ||||||||  |||||||| ||||||    
T  41189780 cggggtccatgtggccacgtgtcaaatttttatgtgggtgtcaaatgatgtattgccacct 41189840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 28 - 188
Target Start/End: Complemental strand, 42823297 - 42823137
Alignment:
Q  28 ataaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattg 127  Q
    ||||||||||||||||||||||||| |||| |  ||||||||||| |||||| |||| |  ||||||||||||||  | | |||||||||||| |  ||     
T  42823297 ataaggaaaatgttacatagacaccttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaataagaaagagaaagtatactta 42823198  T
Q  128 tatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccac 188  Q
    |  ||| |||| |||| ||| ||||| |||||| ||| |||||||| || |||||||||||    
T  42823197 tgcggggtccatatgaccacatgtcaaatttttttgtgggtgtcaaggggtgtattaccac 42823137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 30 - 190
Target Start/End: Original strand, 45058469 - 45058628
Alignment:
Q  30 aaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgta 129  Q
    ||||||||||||||||||||||| |||| |  |||||||| || ||||||||||| |  ||||||||||||||  | | |||||||||||| |  ||||     
T  45058469 aaggaaaatgttacatagacaccttttaattgcatacaccattgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtatacttgtg 45058568  T
Q  130 tgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
     ||| |||| ||| |||| |||||||||||| ||| |||||||| || |||||| ||||||    
T  45058569 cggggtccatatggtcacatgtcagatttttatgtgggtgtcaa-gggtgtattgccacct 45058628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 32 - 184
Target Start/End: Original strand, 35965700 - 35965844
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||| |||| |  | ||| ||| |||| || | ||||||||||||||| ||||       
T  35965700 ggaaaatgttacatagacaccttttattctcatacacccttgtacacctcatgaattaagaaaagaaaagaggagaggaaagagaaagtgtgcttgtgca 35965799  T
Q  132 ggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtatta 184  Q
    |||||        |||||||||||||||| ||| |||||||| ||||||||||    
T  35965800 ggatc--------cacgtgtcagatttttatgtgggtgtcaaaggatgtatta 35965844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 32 - 190
Target Start/End: Original strand, 36331247 - 36331405
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    ||||||||||||||| ||| | |||| |  ||||||||||| ||||||||||| |  ||||||||||||||  | | ||||||||||||||  ||||  |    
T  36331247 ggaaaatgttacatatacatcttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 36331346  T
Q  132 ggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    || |||| |||  ||| |||||||||||||||| |||||||| || || ||| ||||||    
T  36331347 gggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgcattgccacct 36331405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 34 - 128
Target Start/End: Complemental strand, 43746519 - 43746425
Alignment:
Q  34 aaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgt 128  Q
    ||||||||||||| ||||| ||| || |||||||||||| |||||| ||||||| ||||||| |||||| || |||||||||||| |||| ||||    
T  43746519 aaaatgttacataaacaccctttgttgtcatacacccttgtacacctcatgcactaggaagaaagaagaggagatgaaagagaaattgtgtttgt 43746425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 30 - 190
Target Start/End: Complemental strand, 26754879 - 26754719
Alignment:
Q  30 aaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgta 129  Q
    ||||||||||||||||||||||  ||||||  |||||||| || ||||||| ||   | |||||||||||||| || | |||||||||| |||| ||||     
T  26754879 aaggaaaatgttacatagacactctttatttccatacacctttgtacaccctatattctaggaagagagaagaggagaggaaagagaaaatgtgcttgtg 26754780  T
Q  130 tgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
     ||| ||||  ||| ||| |||||||||||||||| | |||| | || |||||| ||||||    
T  26754779 cggggtccatgtgaccacatgtcagatttttgtgtggatgtccaagggtgtattgccacct 26754719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 27714888 - 27714967
Alignment:
Q  111 aagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    ||||||||||||| ||||  ||| |||||||||  ||||||||||||||||||| |||||||| || |||||||||||||    
T  27714888 aagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacct 27714967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 36 - 190
Target Start/End: Original strand, 48587023 - 48587167
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| ||||||| |||| |||||| |||| ||||||||  ||||||||||||          ||||||||||||  ||||  |||||    
T  48587023 aatgatacatagacaccctttattcccatatacccttgtacatcccatgcattaggaagagagaa----------aagagaaagtgtacttgtgcgggat 48587112  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| |||  ||||||||||||||| |||||||||||| || |||||| ||||||    
T  48587113 ccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacct 48587167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 32 - 133
Target Start/End: Original strand, 21746106 - 21746207
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    ||||||| |||||| |||| ||||||||  ||||||||||| |||||| |||  |   ||||||||||||| || ||||||||||||||||| |||||||    
T  21746106 ggaaaatattacatggacatcatttatttacatacacccttgtacacctcatatatttggaagagagaagatgagatgaaagagaaagtgtgcttgtatg 21746205  T
Q  132 gg 133  Q
    ||    
T  21746206 gg 21746207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 173
Target Start/End: Original strand, 1758379 - 1758515
Alignment:
Q  34 aaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatggg 133  Q
    ||||||||||||| ||||  |||||||  ||||||| || ||||||| |||||  |||||||||||||| || |||||||||||| |||| |||| |||     
T  1758379 aaaatgttacataaacactgtttattc--atacacctttgtacaccc-atgcattaggaagagagaagaggagatgaaagagaaaatgtgtttgtgtgga 1758475  T
Q  134 atccacatgatcacgtgtcagatttttgtgtaggtgtcaa 173  Q
     ||||| | | ||  |||||||||||||||| ||||||||    
T  1758476 gtccacgtaaccatatgtcagatttttgtgtgggtgtcaa 1758515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 173
Target Start/End: Complemental strand, 41080848 - 41080749
Alignment:
Q  73 atacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtca 172  Q
    |||||||| ||| || |||||||||||||| || |||||||||||| |||| |||| |||| ||||||||| ||| | ||||||||||| || |||||||    
T  41080848 atacaccctatgtactaggaagagagaagaggagatgaaagagaaaatgtgcttgtgtggg-tccacatgaccacatatcagatttttgcgtgggtgtca 41080750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 11095289 - 11095355
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaaga 102  Q
    |||| |||||||||||| ||||||||||||||||||| ||||||| |||||  ||||||||| ||||    
T  11095289 aatgatacatagacaccctttattctcatacacccttgtacacccgatgcattaggaagagaaaaga 11095355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 164
Target Start/End: Complemental strand, 47532049 - 47531915
Alignment:
Q  30 aaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgta 129  Q
    ||||||||||||||||| ||||| ||||||| ||||||| ||| ||||  |||| ||  |||||||||||| | || |  |||||||||||||| ||||     
T  47532049 aaggaaaatgttacataaacaccctttattcccatacacacttgtacattccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 47531950  T
Q  130 tgggatccacatgatcacgtgtcagatttttgtgt 164  Q
     ||| | || |||  ||||||||||||| ||||||    
T  47531949 cggggttcatatggccacgtgtcagattcttgtgt 47531915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 160
Target Start/End: Complemental strand, 9563177 - 9563053
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||| ||| ||||||| |||||||| || |||| | ||||||  |||||||||||||| || |  | |||||||||||| ||||   ||||    
T  9563177 aatgatacatagataccctttattcccatacacctttgtacaactcatgcattaggaagagagaagaggagagaagagagaaagtgtgtttgtgcaggat 9563078  T
Q  136 ccacatgatcacgtgtcagattttt 160  Q
    |||| |||  |||||||||||||||    
T  9563077 ccacgtgactacgtgtcagattttt 9563053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 36707350 - 36707437
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtg 123  Q
    |||| |||||||||||| ||||||| ||||||  ||| |||||| ||||||  |||||||||||||| || |  ||||||||||||||    
T  36707350 aatgatacatagacaccttttattcccatacattcttgtacacctcatgcattaggaagagagaagaggagagaaaagagaaagtgtg 36707437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 188
Target Start/End: Complemental strand, 39670188 - 39670037
Alignment:
Q  37 atgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggatc 136  Q
    |||||||| ||||| ||||||||  | ||||||||| |||| | ||| ||  | |||||||||||| || |  |||||| |||||||  |||| | | ||    
T  39670188 atgttacacagacatcatttatttccgtacacccttgtacatctcatacattaagaagagagaagaggagagaaaagaggaagtgtgcgtgtacgaggtc 39670089  T
Q  137 cacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccac 188  Q
    ||||||||||||||||| |||||| | ||| |||||| |||| |||| ||||    
T  39670088 cacatgatcacgtgtcaaatttttatatagatgtcaagggatatattgccac 39670037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 162
Target Start/End: Original strand, 48375626 - 48375754
Alignment:
Q  34 aaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatggg 133  Q
    ||||||||||||||||||| ||||||  |||||| | || ||||||| ||   | |||||||||||||| || | |||||||||| |||| ||||  |||    
T  48375626 aaaatgttacatagacaccctttatttccatacatctttgtacaccctatattctaggaagagagaagaggagaggaaagagaaaatgtgcttgtgcggg 48375725  T
Q  134 atccacatgatcacgtgtcagatttttgt 162  Q
     ||||  ||| |||  |||||||||||||    
T  48375726 gtccatgtgaccacacgtcagatttttgt 48375754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 70
Target Start/End: Original strand, 11140961 - 11140999
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacaccc 70  Q
    ||||||||||||||||||||| |||| ||||||||||||    
T  11140961 ggaaaatgttacatagacaccctttagtctcatacaccc 11140999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 182
Target Start/End: Original strand, 25395256 - 25395401
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    ||||||||||||||| | ||||| |||||||| | || |||| |||||| || || |||||| ||||  | |||||||||||| |||| |||| |||| |    
T  25395256 aatgttacatagacatcttttatcctcatacatctttgtaca-cccatgtactagaaagagaaaagagaagatgaaagagaaaatgtgtttgtgtggggt 25395354  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtat 182  Q
    | | ||   ||| |||||||||||||||| ||| | || ||||||||    
T  25395355 ctatatagccacatgtcagatttttgtgtgggtattaagggatgtat 25395401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 11095385 - 11095429
Alignment:
Q  146 acgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    ||||||||||||||||||| |||||||| || |||||| ||||||    
T  11095385 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacct 11095429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 3e-38; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 32 - 188
Target Start/End: Complemental strand, 20700997 - 20700841
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    ||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||| |||||||||||||| || | ||||||||||||||| || |  |    
T  20700997 ggaaaatgttacatagacaccctttattcccatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttatgcg 20700898  T
Q  132 ggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccac 188  Q
    || ||||| |||  |||||||||||||||||||||| ||||| || |||||| ||||    
T  20700897 gggtccacgtgactacgtgtcagatttttgtgtaggagtcaaagggtgtattgccac 20700841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 36 - 183
Target Start/End: Original strand, 7465657 - 7465804
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| ||||||| ||||||||||| |||||| ||||||  |||||||||||||| || || |||||||||||||| |||| |||| |    
T  7465657 aatgatacatagacaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagaagagataaaagagaaagtgtgcttgtgtggggt 7465756  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtatt 183  Q
    |||| |||  ||||||||||||||||||| |||||||| || ||||||    
T  7465757 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtatt 7465804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 36 - 190
Target Start/End: Complemental strand, 28863633 - 28863479
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| ||||||| ||||||||||| |||||| ||||||  |||||||||||||| || || |||||||||||||| ||||  ||| |    
T  28863633 aatgatacatagacaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagaggagataaaagagaaagtgtgcttgtgcggggt 28863534  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| |||  ||||||||||||||||||| |||||||| || |||||| ||||||    
T  28863533 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacct 28863479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 36 - 183
Target Start/End: Complemental strand, 13438521 - 13438374
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| ||||||| |||||| |||| |||||||||||||  |||||||||||||| || |  |||||||||||||| ||||  ||| |    
T  13438521 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 13438422  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtatt 183  Q
    |||| |||  ||||||||||||||||||| |||||||| |||||||||    
T  13438421 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtatt 13438374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 36 - 183
Target Start/End: Complemental strand, 17473198 - 17473051
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| ||||||| ||||||||||| |||||| ||||||  |||||||||||||| || |  |||||||||||||| ||||  |||||    
T  17473198 aatgatacatagacaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 17473099  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtatt 183  Q
    |||| |||  ||||||||||||||||||| |||||||| || ||||||    
T  17473098 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtatt 17473051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 43 - 190
Target Start/End: Original strand, 33436029 - 33436176
Alignment:
Q  43 catagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggatccacatg 142  Q
    |||||||||| ||||||||||||||||||| |||||| ||||||  |||||||||||||| || | ||||||||||||||| ||||  ||| ||||| ||    
T  33436029 catagacaccttttattctcatacacccttgtacacctcatgcattaggaagagagaagatgagaggaaagagaaagtgtgcttgtgcggggtccacgtg 33436128  T
Q  143 atcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |  |||||| |||||||||||| |||||||| || |||||| ||||||    
T  33436129 actacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacct 33436176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 36 - 190
Target Start/End: Original strand, 19930742 - 19930896
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| ||||||| ||||||||||| |||||| ||||||  |||||||||||||| || |  |||||||||||||| ||||  ||| |    
T  19930742 aatgatacatagacaccttttattcccatacacccttgtacacctcatgcattaggaagagagaagaggagagaaaagagaaagtgtgtttgtgcggggt 19930841  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    ||||||||  ||||||||||||||||||| | |||||| || |||||| ||||||    
T  19930842 ccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacct 19930896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 36 - 173
Target Start/End: Original strand, 10249304 - 10249441
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| ||||||||||||||||||| |||||||||||||  ||||||||| |||| || |  |||||||||||||| ||||  ||| |    
T  10249304 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagaaaagaggagagaaaagagaaagtgtgcttgtgcggggt 10249403  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaa 173  Q
    |||| |||  ||||||||||||||||||| ||||||||    
T  10249404 ccacgtgactacgtgtcagatttttgtgtgggtgtcaa 10249441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 54 - 190
Target Start/End: Complemental strand, 9058640 - 9058504
Alignment:
Q  54 tttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtca 153  Q
    ||||||| ||||||| ||| |||||||||||||  |||||||||||||| || |  |||||||||||||| ||||  ||| |||||||||  ||||||||    
T  9058640 tttattcccatacactcttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacatgactacgtgtca 9058541  T
Q  154 gatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    ||||||||||| |||||||| || |||||| ||||||    
T  9058540 gatttttgtgtgggtgtcaaagggtgtattgccacct 9058504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 31 - 199
Target Start/End: Original strand, 40613819 - 40613987
Alignment:
Q  31 aggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtat 130  Q
    |||||||||||||||||||||| ||||||| ||||||||||| |||||||||| ||  | ||||| |||| | || |  |||||||||||||| ||||      
T  40613819 aggaaaatgttacatagacaccctttattcccatacacccttgtacaccccatacattatgaagaaagaataggagagaaaagagaaagtgtgcttgtgc 40613918  T
Q  131 gggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctgatgatgtc 199  Q
    ||| ||||  ||  |||||||||||||||||||| |||||||| || |||||| |||||| | ||||||    
T  40613919 ggggtccatgtggccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtc 40613987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 36 - 190
Target Start/End: Complemental strand, 40701656 - 40701502
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| ||||||  ||||||||||| ||||||| |||||  |||||||||||||| || |  |||||||||||||||||||  ||| |    
T  40701656 aatgatacatagacaccttttatttccatacacccttgtacacccgatgcattaggaagagagaagatgagagaaaagagaaagtgtgattgtgcggggt 40701557  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| | |  ||||||||||||||||||| ||||||||  | |||||| ||||||    
T  40701556 ccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacct 40701502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 36 - 173
Target Start/End: Original strand, 32505570 - 32505707
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||  ||||||||||||||||||| |||||||||||||  | |||||||||||| || |  ||| |||||||||| ||||  ||| |    
T  32505570 aatgatacatagacactctttattctcatacacccttgtacaccccatgcattaagaagagagaagaggagagaaaatagaaagtgtgcttgtgcggggt 32505669  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaa 173  Q
    |||| |||  ||||||||||||||||||| ||||||||    
T  32505670 ccacgtgactacgtgtcagatttttgtgtgggtgtcaa 32505707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 31 - 173
Target Start/End: Complemental strand, 13365536 - 13365394
Alignment:
Q  31 aggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtat 130  Q
    |||||||||||||||||||||| |||| |  ||| ||||||| ||||||||||| |  ||||||||||||||  | | ||||||||||||||  ||||      
T  13365536 aggaaaatgttacatagacaccttttaattgcattcacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgc 13365437  T
Q  131 gggatccacatgatcacgtgtcagatttttgtgtaggtgtcaa 173  Q
    ||| |||| ||| |||| |||||||||||||||| ||||||||    
T  13365436 ggggtccatatggtcacatgtcagatttttgtgtgggtgtcaa 13365394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 30 - 183
Target Start/End: Complemental strand, 38732538 - 38732385
Alignment:
Q  30 aaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgta 129  Q
    ||||||||||||||||||||||| |||| |  |||||| |||| |||| | |||| |  ||||||||||||||  | | ||||||||||||||  ||||     
T  38732538 aaggaaaatgttacatagacaccttttaattgcatacatccttgtacatctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtg 38732439  T
Q  130 tgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtatt 183  Q
     ||| |||| |||| ||| |||||||||||||||| |||||||| |||||||||    
T  38732438 cggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagggatgtatt 38732385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 33 - 160
Target Start/End: Complemental strand, 44152108 - 44151978
Alignment:
Q  33 gaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgg 132  Q
    |||||||||||||| ||||| ||||||| ||||||||||| || | | ||||||  |||||||||||||| || ||||||||||||||||| |||| |||    
T  44152108 gaaaatgttacataaacaccttttattcgcatacacccttgtatatctcatgcattaggaagagagaagaggagatgaaagagaaagtgtgcttgtgtgg 44152009  T
Q  133 gat---ccacatgatcacgtgtcagattttt 160  Q
    |||   | |||| | ||||||||||||||||    
T  44152008 gattcactacataaccacgtgtcagattttt 44151978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 31 - 138
Target Start/End: Complemental strand, 17823971 - 17823864
Alignment:
Q  31 aggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtat 130  Q
    |||||||||||||||||||| | ||||||  ||||||||||| ||||||||||  |   ||||||||||||| || ||||||||||||||||| ||||||    
T  17823971 aggaaaatgttacatagacatcctttatttacatacacccttgtacaccccatatatttggaagagagaagatgagatgaaagagaaagtgtgcttgtat 17823872  T
Q  131 gggatcca 138  Q
    ||| ||||    
T  17823871 ggggtcca 17823864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 33 - 190
Target Start/End: Original strand, 17819923 - 17820080
Alignment:
Q  33 gaaaatgttacatagacaccatttattctcatacaccctta-tacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    |||||||||| ||| ||| |||| ||||||||| ||| ||  |||||| ||||||  |||||||||||||| || |||||||||||| |||| |||| ||    
T  17819923 gaaaatgttatataaacatcatt-attctcataaaccttttgtacacctcatgcattaggaagagagaagaggagatgaaagagaaaatgtgtttgtgtg 17820021  T
Q  132 ggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    || ||||| | | ||| |||||||||||||||| |||||||| || |||||| ||||||    
T  17820022 gggtccacgtaaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacct 17820080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 190
Target Start/End: Complemental strand, 30915641 - 30915487
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||| |  |||||  ||||||||||| ||||||||||| |  |||||||||||||| || |  |||||||||||||| ||||| ||| |    
T  30915641 aatgatacatagacatccattatttccatacacccttgtacaccccatgtattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacggggt 30915542  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| |||  ||||||||||||||| ||| || ||||| || |||||| ||||||    
T  30915541 ccacgtgactacgtgtcagatttttatgtgggggtcaaagggtgtattgccacct 30915487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 31 - 188
Target Start/End: Complemental strand, 2533306 - 2533150
Alignment:
Q  31 aggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtat 130  Q
    |||||||||||| ||| ||||| ||||||| ||||||||||| |||||||||| ||   ||||||||||||| || || ||||| |||||||| ||||      
T  2533306 aggaaaatgttatatatacaccctttattcccatacacccttgtacaccccatacattgggaagagagaagaggagataaaagaaaaagtgtgcttgtgc 2533207  T
Q  131 gggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccac 188  Q
    ||| || |  ||   ||||||||||||||||||| |||||||| ||||||||| ||||    
T  2533206 ggggtctatgtggctacgtgtcagatttttgtgt-ggtgtcaaaggatgtattgccac 2533150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 30 - 190
Target Start/End: Original strand, 2997403 - 2997563
Alignment:
Q  30 aaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgta 129  Q
    |||| |||||||||||||||||  |||| |  ||||||||||| |||||| |||| |  ||||||||||||||  | | ||||||||||||||  ||||     
T  2997403 aagggaaatgttacatagacactttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtg 2997502  T
Q  130 tgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
     ||| |||| |||  ||| |||||||||||||||| |||||||| || |||||| ||||||    
T  2997503 cggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacct 2997563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 31 - 199
Target Start/End: Complemental strand, 42257376 - 42257208
Alignment:
Q  31 aggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtat 130  Q
    |||||||| ||||||||||||| ||||||   |||||| ||| |||||||||| ||  ||||||| |||||| || |  |||||||||||||| ||||      
T  42257376 aggaaaatattacatagacaccctttatttctatacactcttgtacaccccatacattaggaagaaagaagaggagagaaaagagaaagtgtgcttgtgc 42257277  T
Q  131 gggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctgatgatgtc 199  Q
    ||| ||||  ||  |||||||||||||||| ||| ||||||||  |||||||| |||||| | ||||||    
T  42257276 ggggtccatgtggccacgtgtcagatttttatgtgggtgtcaaatgatgtattgccacctaaagatgtc 42257208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 28 - 171
Target Start/End: Complemental strand, 3440165 - 3440022
Alignment:
Q  28 ataaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattg 127  Q
    ||||||||||||||||||||||||| ||||||  |||||||| || ||||||| ||   | || ||||||||||| || | |||||||||| |||| |||    
T  3440165 ataaggaaaatgttacatagacaccctttatttccatacacctttgtacaccctatattctagaaagagagaagaggagaggaaagagaaaatgtgcttg 3440066  T
Q  128 tatgggatccacatgatcacgtgtcagatttttgtgtaggtgtc 171  Q
    |  ||| ||||| | ||||| ||| |||||||||||| ||||||    
T  3440065 tgcggggtccacgtaatcacatgttagatttttgtgtgggtgtc 3440022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 32 - 171
Target Start/End: Complemental strand, 3738125 - 3737986
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    ||||||||||||||||||||| | |||| ||||||||| || ||||||| ||   | ||||||| |||||| || | |||| ||||| |||| ||||  |    
T  3738125 ggaaaatgttacatagacaccctatattttcatacacctttgtacaccctatattctaggaagaaagaagaggagaggaaaaagaaaatgtgcttgtgcg 3738026  T
Q  132 ggatccacatgatcacgtgtcagatttttgtgtaggtgtc 171  Q
    || ||||||||| ||| |||||||||||||||| ||||||    
T  3738025 gggtccacatgaccacatgtcagatttttgtgtgggtgtc 3737986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 32 - 183
Target Start/End: Complemental strand, 36169018 - 36168867
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    ||||||||||||||| ||||| ||||||||||||||| ||| |||||||||| ||  |||||||||||| | || |  ||||||||||| || ||||  |    
T  36169018 ggaaaatgttacataaacaccctttattctcatacactcttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtatgcttgtgcg 36168919  T
Q  132 ggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtatt 183  Q
    || ||||  ||  ||||||||| |||||||||| || || || |||||||||    
T  36168918 gggtccatgtggccacgtgtcaaatttttgtgtgggagttaaaggatgtatt 36168867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 32 - 183
Target Start/End: Complemental strand, 43490303 - 43490152
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    ||||||||||||||||||||| |||| |  ||||||||||| ||||||| ||| |  ||||||||||||||  | | |||||| |||||||  ||||  |    
T  43490303 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccctatgtattaggaagagagaagagaagaagaaagataaagtgtacttgtgcg 43490204  T
Q  132 ggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtatt 183  Q
    || |||| |||  ||| |||||||||||||||| |||||||| || ||||||    
T  43490203 gggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtatt 43490152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 28381577 - 28381712
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| ||||||| |||||| |||| ||||||||||  |  |||||||||||||| || |  |||||||||||||| ||||  ||  |    
T  28381577 aatgatacatagacaccctttattcccatacatccttgtacaccccatatattaggaagagagaagatgagagaaaagagaaagtgtgcttgtgcggagt 28381676  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtc 171  Q
    |||  |||  ||||||||||||||||||| ||||||    
T  28381677 ccatgtgactacgtgtcagatttttgtgtgggtgtc 28381712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 164
Target Start/End: Original strand, 21301420 - 21301550
Alignment:
Q  34 aaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatggg 133  Q
    ||||||||| ||| ||||| ||||||  ||||||| | | |||||| ||||||| ||||||| ||||||  | || |||||||||||||| |||| | |     
T  21301420 aaaatgttagatacacaccctttatttccatacactcatgtacacctcatgcactaggaagaaagaagagaagataaaagagaaagtgtgtttgtgtaga 21301519  T
Q  134 atccacatgatcacgtgtcagatttttgtgt 164  Q
     ||||||||||||||| || |||||||||||    
T  21301520 gtccacatgatcacgtatctgatttttgtgt 21301550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 36 - 173
Target Start/End: Complemental strand, 4060863 - 4060726
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||| ||| | ||||||  ||||||||||| |||||||||||||  |||||||||||||| || |  ||| |||||||||| || |  |||||    
T  4060863 aatgatacataaacatcttttatttccatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaaaagaaagtgtgcttatgcgggat 4060764  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaa 173  Q
    |||| | |  ||||||||||||||||||| | ||||||    
T  4060763 ccacgtaactacgtgtcagatttttgtgtggatgtcaa 4060726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 36 - 190
Target Start/End: Original strand, 5574422 - 5574564
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| ||||||| ||||||||||| ||||| |||||||  |||||||||            |||||||||||||| ||||  |||||    
T  5574422 aatgatacatagacaccctttattcccatacacccttgtacacgccatgcattaggaagaga------------aaagagaaagtgtgcttgtgcgggat 5574509  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| |||  ||||||||||||||| ||| |||||||| || |||||| ||||||    
T  5574510 ccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacct 5574564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 41758767 - 41758678
Alignment:
Q  34 aaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtg 123  Q
    ||||||||||||||||||  |||||||||||||| |||| ||||||||||  |  |||||||||||||| || || ||||||||| ||||    
T  41758767 aaaatgttacatagacacattttattctcatacatccttgtacaccccatatattaggaagagagaagaggagataaaagagaaaatgtg 41758678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 164
Target Start/End: Original strand, 15428663 - 15428790
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    ||||||||||||||| ||||||  ||||||||||||| |||| |||||| || || |||||| |||| || |||||||||||| |||| |||  |||| |    
T  15428663 aatgttacatagacatcatttaccctcatacacccttgtaca-cccatgtactagaaagagaaaagaggagatgaaagagaaaatgtgtttgcgtggggt 15428761  T
Q  136 ccacatgatcacgtgtcagatttttgtgt 164  Q
      |||||  ||| ||||||||||||||||    
T  15428762 ttacatggccacatgtcagatttttgtgt 15428790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 173
Target Start/End: Complemental strand, 33436385 - 33436252
Alignment:
Q  30 aaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgta 129  Q
    ||||||||||||||||||||||| ||||||||||||          |||| |||| || |||||||||||||| || | ||||||||||||||| ||||     
T  33436385 aaggaaaatgttacatagacaccttttattctcata----------cacctcatgaactaggaagagagaagaggataggaaagagaaagtgtgcttgtg 33436296  T
Q  130 tgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaa 173  Q
         |||||||| ||||||||||||||||| ||| ||||||||    
T  33436295 caaagtccacatggtcacgtgtcagatttttatgtgggtgtcaa 33436252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 32 - 183
Target Start/End: Original strand, 38273061 - 38273211
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    ||||||| ||||||| ||||||||||||||||||||  ||| |||||||||| ||  |||||||||||| | || |  |||||||||||||| | ||  |    
T  38273061 ggaaaatattacataaacaccatttattctcataca-tcttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgctagtgcg 38273159  T
Q  132 ggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtatt 183  Q
    || ||||  ||   ||||||||||||||||||| ||||| || || ||||||    
T  38273160 gggtccatgtggctacgtgtcagatttttgtgtgggtgttaaagggtgtatt 38273211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 31 - 190
Target Start/End: Original strand, 45097652 - 45097811
Alignment:
Q  31 aggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtat 130  Q
    |||||||||||||||| ||| | |||| |  ||||||| ||| |||| || ||| |  ||||||||||||||  | | ||||||||||||||  ||||      
T  45097652 aggaaaatgttacataaacatcttttaattgcatacactcttgtacatccgatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgc 45097751  T
Q  131 gggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    ||| |||| |||  ||| |||||||||||||| | |||||||| ||||||||| ||||||    
T  45097752 ggggtccatatggccacatgtcagatttttgtatgggtgtcaagggatgtattgccacct 45097811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 38882733 - 38882799
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaaga 102  Q
    |||| |||||||| ||||||||||| ||||||||||| |||||||||||||  ||||||||| ||||    
T  38882733 aatgatacatagagaccatttattcccatacacccttgtacaccccatgcattaggaagagataaga 38882799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 164
Target Start/End: Original strand, 3034901 - 3035033
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    ||||||||||||||||||||| |||| |  |||||||| |  |||||| |||| |  ||||||||||||||  | | |||||||||||| |  ||||  |    
T  3034901 ggaaaatgttacatagacaccttttaattgcatacaccttggtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtatacttgtgcg 3035000  T
Q  132 ggatccacatgatcacgtgtcagatttttgtgt 164  Q
    || |||| |||| ||| ||||||||||||||||    
T  3035001 gggtccatatgaccacatgtcagatttttgtgt 3035033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 187
Target Start/End: Complemental strand, 41575308 - 41575164
Alignment:
Q  34 aaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtat-gg 132  Q
    |||||||||||||||||| |||||||||||          |||| | ||||||  |||| ||||||||| || ||||||||||||||||| |||| | ||    
T  41575308 aaaatgttacatagacactatttattctca----------tacatctcatgcattaggacgagagaagaggagatgaaagagaaagtgtgcttgtgtagg 41575219  T
Q  133 gatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattacca 187  Q
    | ||||||||| ||| ||||| ||||||||||   |||||| || ||||||||||    
T  41575218 ggtccacatgaccacatgtcaaatttttgtgtgaatgtcaaagggtgtattacca 41575164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 32 - 190
Target Start/End: Original strand, 26891422 - 26891580
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    ||||||||||||||| ||||| || ||| ||||||||  || |||||||  |  |  ||||||||||||||  | | |||||||||| |||| ||||  |    
T  26891422 ggaaaatgttacatatacacccttaattttcatacacatttttacaccctgtatattaggaagagagaagagaagaggaaagagaaaatgtgcttgttcg 26891521  T
Q  132 ggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
     | ||||| ||| ||| |||||||||||||||| |||||| | || |||||| ||||||    
T  26891522 aggtccacgtgaccacatgtcagatttttgtgtgggtgtctaggggtgtattgccacct 26891580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 109 - 188
Target Start/End: Complemental strand, 27864809 - 27864730
Alignment:
Q  109 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccac 188  Q
    ||||||||||||||| || |  ||| ||||| |||| ||||||||||||||||||| | |||||| || |||||| ||||    
T  27864809 gaaagagaaagtgtgcttttgcggggtccacgtgattacgtgtcagatttttgtgtggatgtcaaagggtgtattgccac 27864730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 27864869 - 27864808
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagaga 97  Q
    |||| ||||| |||||| ||||||||||||||||||| |||| |||||| |  |||||||||    
T  27864869 aatgatacattgacaccctttattctcatacacccttgtacatcccatgtattaggaagaga 27864808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 165
Target Start/End: Complemental strand, 3154264 - 3154192
Alignment:
Q  93 agagagaagacgaaatgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgta 165  Q
    ||||| |||| || |||||||||||| |||| |||   ||||||||  ||| |||||||||||||||||||||    
T  3154264 agagaaaagaggagatgaaagagaaactgtgtttgggcgggatccatgtgaccacgtgtcagatttttgtgta 3154192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 6e-36; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 30 - 190
Target Start/End: Complemental strand, 29240070 - 29239910
Alignment:
Q  30 aaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgta 129  Q
    ||||||||||||||||||||||| ||||||| ||||||| ||| |||||||||||||| |||||||||||||| || | ||||||||||||||| ||||     
T  29240070 aaggaaaatgttacatagacaccctttattcccatacactcttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtg 29239971  T
Q  130 tgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| ||||| |||  |||||| |||||||||||| | ||||||  | |||||| ||||||    
T  29239970 tggggtccacgtgactacgtgttagatttttgtgtggatgtcaaatggtgtattgccacct 29239910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 31 - 199
Target Start/End: Original strand, 50052345 - 50052513
Alignment:
Q  31 aggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtat 130  Q
    |||||||||||||||||||||| ||||||| |||||||| || ||||||  |||||| |||||||||||||| || | ||||||||||||||| ||||      
T  50052345 aggaaaatgttacatagacaccctttattcccatacacctttgtacaccttatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgc 50052444  T
Q  131 gggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctgatgatgtc 199  Q
    ||| ||||| |||  ||||||||||||||||||| |||||||| || |||||| |||||| | ||||||    
T  50052445 ggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtc 50052513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 36 - 190
Target Start/End: Complemental strand, 6034222 - 6034068
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| ||||||||||||||||||| |||||||||||||  |||||||||||||| || |  |||||||||||||| ||||  |||||    
T  6034222 aatgatacatagacaccttttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 6034123  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| |||  || |||||||||||||||| |||||||| || |||||| ||||||    
T  6034122 ccacgtgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacct 6034068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 199
Target Start/End: Original strand, 50526088 - 50526256
Alignment:
Q  31 aggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtat 130  Q
    |||||||||||||||| ||||| ||||||   |||||||||| |||||||||||||| |||||||||||||| || | |||| |||||| ||| ||||      
T  50526088 aggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaatagaaagcgtgcttgtgc 50526187  T
Q  131 gggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctgatgatgtc 199  Q
    || |||||| ||| |||||||||||||||||||| |||||||| || |||||| |||||| | ||||||    
T  50526188 ggaatccacgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtc 50526256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 36 - 188
Target Start/End: Original strand, 48182971 - 48183123
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| ||||||||||||||||||| |||||||||||||  | |||||||||||| || |  |||||||||||||| ||||  ||| |    
T  48182971 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaagaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 48183070  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccac 188  Q
    |||| |||  ||||||||||||||||||| |||||||| || |||||| ||||    
T  48183071 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 48183123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 41824064 - 41823926
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    |||||||||||||||||||||||||||||||||||||| || |||||| ||||||  |||||||||||||| || |  |||||||||||||| ||||  |    
T  41824064 ggaaaatgttacatagacaccatttattctcatacacctttgtacacctcatgcattaggaagagagaagaagagagaaaagagaaagtgtgcttgtgcg 41823965  T
Q  132 ggatccacatgatcacgtgtcagatttttgtgtaggtgt 170  Q
    || ||||  |||  ||||||||||||||||||| |||||    
T  41823964 gggtccatgtgactacgtgtcagatttttgtgtgggtgt 41823926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 34 - 199
Target Start/End: Complemental strand, 40574959 - 40574794
Alignment:
Q  34 aaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatggg 133  Q
    ||||||||| ||||||||| ||||||||||||||||||| ||||||||||  |  |||||||||||||| || |  |||||||||||||| ||||  |||    
T  40574959 aaaatgttagatagacaccttttattctcatacacccttgtacaccccatatattaggaagagagaagaggagagaaaagagaaagtgtgcttgttcggg 40574860  T
Q  134 atccacatgatca-cgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctgatgatgtc 199  Q
    |||||  | | || |||||||||||||||||| |||||||| || ||||||||||||| | ||||||    
T  40574859 atccatgt-agcagcgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtc 40574794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 36 - 190
Target Start/End: Complemental strand, 41236525 - 41236371
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| ||||||| ||||||||||| |||||||||||||  |||||||||||||| || |  |||||||||||||| ||||  ||| |    
T  41236525 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 41236426  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| |||  ||||||||||||||||||| | ||||||  | |||||| ||||||    
T  41236425 ccacgtgactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgccacct 41236371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 28 - 164
Target Start/End: Original strand, 28480182 - 28480318
Alignment:
Q  28 ataaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattg 127  Q
    ||||||||||||||||||||||||| |||||    ||||| |||| |||| | ||||||| |||||||||||||| || ||||| ||||||||||| |||    
T  28480182 ataaggaaaatgttacatagacaccctttataagaatacatccttgtacaactcatgcactaggaagagagaagaggagatgaaggagaaagtgtgtttg 28480281  T
Q  128 tatgggatccacatgatcacgtgtcagatttttgtgt 164  Q
    | |||| |||||||||  || ||||||||||||||||    
T  28480282 tgtggggtccacatgactacatgtcagatttttgtgt 28480318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 28 - 164
Target Start/End: Original strand, 28481057 - 28481193
Alignment:
Q  28 ataaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattg 127  Q
    ||||||||||||||||||||||||| |||||    ||||| |||| |||| | ||||||| |||||||||||||| || ||||| ||||||||||| |||    
T  28481057 ataaggaaaatgttacatagacaccctttataagaatacatccttgtacaactcatgcactaggaagagagaagaggagatgaaggagaaagtgtgtttg 28481156  T
Q  128 tatgggatccacatgatcacgtgtcagatttttgtgt 164  Q
    | |||| |||||||||  || ||||||||||||||||    
T  28481157 tgtggggtccacatgactacatgtcagatttttgtgt 28481193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 28 - 164
Target Start/End: Original strand, 28481932 - 28482068
Alignment:
Q  28 ataaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattg 127  Q
    ||||||||||||||||||||||||| |||||    ||||| |||| |||| | ||||||| |||||||||||||| || ||||| ||||||||||| |||    
T  28481932 ataaggaaaatgttacatagacaccctttataagaatacatccttgtacaactcatgcactaggaagagagaagaggagatgaaggagaaagtgtgtttg 28482031  T
Q  128 tatgggatccacatgatcacgtgtcagatttttgtgt 164  Q
    | |||| |||||||||  || ||||||||||||||||    
T  28482032 tgtggggtccacatgactacatgtcagatttttgtgt 28482068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 31 - 190
Target Start/End: Original strand, 29547876 - 29548035
Alignment:
Q  31 aggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtat 130  Q
    |||||||||||||||||||||| |||| |  ||||||||||| ||||||||||| |  ||||||||||||||  | | |||||| |||||||  || |      
T  29547876 aggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagaaaaagtgtacttatgc 29547975  T
Q  131 gggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||||||| |||  ||| |||||||||||||||| |||||||| ||||||||| ||||||    
T  29547976 gggatccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgccacct 29548035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 36 - 190
Target Start/End: Original strand, 42044289 - 42044443
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| ||||||  ||||||||||| |||| ||||||||  |||||||||||||| || |  |||||||||||||| ||||  ||| |    
T  42044289 aatgatacatagacaccctttatttccatacacccttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 42044388  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| |||  ||||||||||||||||||| |||||  | ||||||||| ||||||    
T  42044389 ccacgtgactacgtgtcagatttttgtgtgggtgtacaaggatgtattgccacct 42044443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 28 - 173
Target Start/End: Complemental strand, 31910378 - 31910233
Alignment:
Q  28 ataaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattg 127  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| |||| ||||| ||  |||||||||||||| || |  |||||||||||||| |||    
T  31910378 ataaggaaaatgttacatagacaccatttattcccatacactcttgtacatcccatacattaggaagagagaagatgagagaaaagagaaagtgtgcttg 31910279  T
Q  128 tatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaa 173  Q
    |  ||| ||||  ||   | ||||||||||||||||| ||||||||    
T  31910278 tgcggggtccatgtggctatgtgtcagatttttgtgtgggtgtcaa 31910233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 30 - 190
Target Start/End: Original strand, 19670632 - 19670792
Alignment:
Q  30 aaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgta 129  Q
    ||||||||||||||||||||||| |||| |  ||||||||||| ||||||||||| |  ||||||||||||||  | | ||||||||||||||  ||||     
T  19670632 aaggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtg 19670731  T
Q  130 tgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
     ||| |||| |||  ||| ||||||||||||||||  ||||||| || |||||| ||||||    
T  19670732 cggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacct 19670792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 32 - 190
Target Start/End: Original strand, 50813810 - 50813968
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    ||||||||||||||||||||| |||| |  ||||||||||| |||| | |||| |  ||||||||||||||  | | ||||||||||||||  ||||  |    
T  50813810 ggaaaatgttacatagacaccttttaattgcatacacccttgtacatctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 50813909  T
Q  132 ggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    || | || |||| ||| |||||||||||||||| |||||||| || |||||||||||||    
T  50813910 gggttcatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattaccacct 50813968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 62 - 183
Target Start/End: Original strand, 480395 - 480516
Alignment:
Q  62 catacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttg 161  Q
    |||||||| || |||||||||||||  |||||||||||||| || |  |||||||||||||| ||||| ||| ||||| |||  ||||||||||||||||    
T  480395 catacacctttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttg 480494  T
Q  162 tgtaggtgtcaatggatgtatt 183  Q
    ||| |||||||| || ||||||    
T  480495 tgtgggtgtcaaagggtgtatt 480516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 30 - 190
Target Start/End: Complemental strand, 47986391 - 47986232
Alignment:
Q  30 aaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgta 129  Q
    ||||||||||||||||||||||| || |||  ||||||||||| |||| |||||| |  ||||||||||||||  | | ||||||||||||||  ||||     
T  47986391 aaggaaaatgttacatagacacctttaattg-catacacccttgtacatcccatgtattaggaagagagaagagaataagaaagagaaagtgtacttgtg 47986293  T
Q  130 tgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
     ||| |||| |||  ||| |||||||||||||||| | |||||| ||||||||| ||||||    
T  47986292 cggggtccatatggccacatgtcagatttttgtgtggatgtcaagggatgtattgccacct 47986232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 32 - 190
Target Start/End: Complemental strand, 55475373 - 55475215
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    ||||||||||||||||||||| |||| |  ||||||||||| ||||||||||| |  ||||||||||||||  | | ||||||||||||||  || |       
T  55475373 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttatgca 55475274  T
Q  132 ggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    || |||| |||  ||| |||||||||||||||| |||||||| || |||||| ||||||    
T  55475273 gggtccatatggccacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacct 55475215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 30 - 190
Target Start/End: Complemental strand, 3481828 - 3481678
Alignment:
Q  30 aaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgta 129  Q
    ||||||||||||||||||||||| ||||||||||||||||||          |||||| || ||||||||||| |  | ||||||||||||||| ||||     
T  3481828 aaggaaaatgttacatagacaccctttattctcatacaccct----------atgcactagaaagagagaagatgggaggaaagagaaagtgtgcttgtg 3481739  T
Q  130 tgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| ||||| |||  | ||||||||||||||||| |||||||| |  |||||| ||||||    
T  3481738 tggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacct 3481678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 36 - 173
Target Start/End: Complemental strand, 23608413 - 23608276
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||| | ||||||| |||||| || | |||||| ||||||  |||||||||||||| || || |||||||||||||| |||| |||  |    
T  23608413 aatgatacatagacatcctttattcccatacatccctgtacacctcatgcattaggaagagagaagaggagataaaagagaaagtgtgcttgtgtggagt 23608314  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaa 173  Q
     ||| |||  ||||||||||||||||||| ||||||||    
T  23608313 tcacgtgactacgtgtcagatttttgtgtgggtgtcaa 23608276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 30 - 190
Target Start/End: Original strand, 17983659 - 17983819
Alignment:
Q  30 aaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgta 129  Q
    |||| |||||||||||||||||  |||| |  ||||||||||| |||||| |||| |  ||||||||||||||  | | ||||||||||||||  ||||     
T  17983659 aagggaaatgttacatagacactttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtg 17983758  T
Q  130 tgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
     ||| |||| |||  ||| |||||||||||||||| |||||||| || |||||| ||||||    
T  17983759 cggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacct 17983819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 34 - 190
Target Start/End: Complemental strand, 29978065 - 29977909
Alignment:
Q  34 aaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatggg 133  Q
    ||||||||||||||| | | |||||||  |||||| ||| |||||||||| ||  ||  ||||| ||||  | ||||||||||||||||| |||| ||||    
T  29978065 aaaatgttacatagatatcttttattcctatacacacttgtacaccccatacattagtgagagaaaagagaagatgaaagagaaagtgtgcttgtgtggg 29977966  T
Q  134 atccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
     |||| ||||  ||||||||||||||||||| ||||| || || |||||| ||||||    
T  29977965 gtccatatgactacgtgtcagatttttgtgtgggtgttaaggggtgtattgccacct 29977909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 36 - 183
Target Start/End: Original strand, 24995029 - 24995176
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| ||||||| |||||||| || |||||||||||||  | |||||||||||| || |  ||||||||| |||| ||||  ||| |    
T  24995029 aatgatacatagacaccctttattcccatacaccattgtacaccccatgcattaagaagagagaagaggagagaaaagagaaaatgtgcttgtgcggggt 24995128  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtatt 183  Q
    |||| |||  |||||||| |||||| ||| |||||||| || ||||||    
T  24995129 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtatt 24995176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 36 - 190
Target Start/End: Original strand, 11511385 - 11511538
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| ||||||||||| |||||||  ||||||||||| |||||| ||||||  | ||||||||||||  | |  |||||||||||||| ||||  ||| |    
T  11511385 aatgatacatagacac-atttatttccatacacccttgtacacctcatgcattaagaagagagaagagaagagaaaagagaaagtgtgcttgtgcggggt 11511483  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| |||  ||||||||||||||| ||| |||||||| || |||||| ||||||    
T  11511484 ccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacct 11511538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 183
Target Start/End: Original strand, 29589656 - 29589809
Alignment:
Q  30 aaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgta 129  Q
    ||||||||| ||||||||||||| |||| |  ||||||| ||| |||||| |||| |  ||||||||||||||  | | ||||||||||||||  ||||     
T  29589656 aaggaaaatattacatagacaccttttaattgcatacactcttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtg 29589755  T
Q  130 tgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtatt 183  Q
    |||| |||| |||  ||| | |||||||||||||| |||||||| || ||||||    
T  29589756 tggggtccatatggccacatatcagatttttgtgtgggtgtcaaggggtgtatt 29589809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 183
Target Start/End: Original strand, 29234204 - 29234314
Alignment:
Q  73 atacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtca 172  Q
    ||||||||||||||  |||||||||||||| || |  |||||||||||||| ||||  ||| ||||| |||  |||||||||||||||||| |||| |||    
T  29234204 atacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgaaggtatca 29234303  T
Q  173 atggatgtatt 183  Q
    | || ||||||    
T  29234304 aagggtgtatt 29234314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 35 - 172
Target Start/End: Complemental strand, 47104723 - 47104586
Alignment:
Q  35 aaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatggga 134  Q
    ||||||||| |||||||  ||||||||| ||||  ||  |||||| ||||||  | |||||||||||| || ||||||||||||||||| |||| ||||     
T  47104723 aaatgttacgtagacactttttattctcgtacattctagtacacctcatgcattaagaagagagaagaggagatgaaagagaaagtgtgtttgtgtgggg 47104624  T
Q  135 tccacatgatcacgtgtcagatttttgtgtaggtgtca 172  Q
    || | |  | ||||||||| |||||||||| |||||||    
T  47104623 tcaataaaaccacgtgtcaaatttttgtgtgggtgtca 47104586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 33 - 170
Target Start/End: Original strand, 48647645 - 48647782
Alignment:
Q  33 gaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgg 132  Q
    |||||||||||||||||| |||||||| | ||||| | || ||||  | |||||| |||||||||||||| || | |||||||||| |||| ||||  ||    
T  48647645 gaaaatgttacatagacatcatttatttttatacatctttgtacattctatgcactaggaagagagaagaggagaggaaagagaaattgtgcttgtgcgg 48647744  T
Q  133 gatccacatgatcacgtgtcagatttttgtgtaggtgt 170  Q
      ||||| ||| ||||||| |||||||| ||| |||||    
T  48647745 agtccacgtgaccacgtgttagatttttatgtgggtgt 48647782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 173
Target Start/End: Original strand, 54473467 - 54473592
Alignment:
Q  48 acaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggatccacatgatcac 147  Q
    ||||| ||||||| ||||||||||| ||||| ||||| |  |||||||||||||| || |  ||||| |||||||| ||||  ||| ||||| |||  ||    
T  54473467 acaccctttattcccatacacccttgtacactccatgtattaggaagagagaagaggagagaaaagataaagtgtgcttgtgcggggtccacgtgactac 54473566  T
Q  148 gtgtcagatttttgtgtaggtgtcaa 173  Q
    |||| |||||||||||| ||||||||    
T  54473567 gtgttagatttttgtgtgggtgtcaa 54473592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 170
Target Start/End: Original strand, 18768972 - 18769103
Alignment:
Q  38 tgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggatcc 137  Q
    ||||||||| ||| ||||||  |||||||| |||| ||||||| ||| |  ||||||||| || | || |||||||||||| |||| |||| ||||||      
T  18768972 tgttacataaacatcatttaccctcatacatccttgtacaccc-atgtattaggaagagaaaaaatgagatgaaagagaaaatgtgtttgtgtgggattt 18769070  T
Q  138 acatgatcacgtgtcagatttttgtgtaggtgt 170  Q
    |||||| ||| |||||||||||||||| |||||    
T  18769071 acatgaccacatgtcagatttttgtgtgggtgt 18769103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 18924411 - 18924503
Alignment:
Q  30 aaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgt 122  Q
    ||||||||||||||||||||||| |||| |  ||||||||||| |||||| |||| |  ||||||||||||||  | | ||||||||||||||    
T  18924411 aaggaaaatgttacatagacaccttttaattgcatacacccttttacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgt 18924503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 190
Target Start/End: Original strand, 44536663 - 44536821
Alignment:
Q  31 aggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtat 130  Q
    |||||||||||||||||||||  |||| |  ||||||  ||| ||||||| ||| |  ||||||||||||||  | | ||||||||||||||  || | |    
T  44536663 aggaaaatgttacatagacacattttaattgcatacattcttgtacaccctatgtattaggaagagagaagagaagaagaaagagaaagtgtacttatgt 44536762  T
Q  131 gggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    ||| || | |||| ||| |||||||||||||||| | |||||| || |||||| ||||||    
T  44536763 ggggtctatatgaccacatgtcagatttttgtgtggatgtcaa-gggtgtattgccacct 44536821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 182
Target Start/End: Original strand, 56300086 - 56300233
Alignment:
Q  35 aaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatggga 134  Q
    ||||||||| ||||||   ||||||||||||||  ||| |||| | ||| ||  || ||||||||||| || | ||||||||||||||| ||||   |||    
T  56300086 aaatgttacgtagacattctttattctcatacaatcttgtacatctcatacattagaaagagagaagaggagaggaaagagaaagtgtgtttgtgcagga 56300185  T
Q  135 tccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtat 182  Q
    | || |||| ||| |||||||||||||||| | ||||||  |||||||    
T  56300186 ttcatatgaccacatgtcagatttttgtgtggatgtcaaatgatgtat 56300233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 36 - 183
Target Start/End: Original strand, 53352496 - 53352635
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| |||||| |||||||||||| ||||||         |||||||||||||| || |  ||||||||||| || ||||  ||| |    
T  53352496 aatgatacatagacaccctttattttcatacacccttgtacacct--------aggaagagagaagaggagagaaaagagaaagtatgcttgtgcggggt 53352587  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtatt 183  Q
    |||| | |  ||||||||||||||||||||||||| || | |||||||    
T  53352588 ccacttaactacgtgtcagatttttgtgtaggtgttaaagaatgtatt 53352635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 31 - 190
Target Start/End: Complemental strand, 32767141 - 32766982
Alignment:
Q  31 aggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtat 130  Q
    |||||||||||||||||||||  |||| |  ||||||||||| ||||| | ||| |  || |||||||| ||  | | ||||||||||||||  ||||      
T  32767141 aggaaaatgttacatagacacattttaattgcatacacccttgtacactctatgtattagaaagagagaggagaagaagaaagagaaagtgtacttgtgc 32767042  T
Q  131 gggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
     || |||| |||  ||| |||||||||||||| | |||||||| || |||||| ||||||    
T  32767041 agggtccatatggccacatgtcagatttttgtatgggtgtcaaggggtgtattgccacct 32766982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 190
Target Start/End: Original strand, 8343198 - 8343239
Alignment:
Q  149 tgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||||||||||| |||||||||||| ||||||||| ||||||    
T  8343198 tgtcagatttttatgtaggtgtcaaaggatgtattgccacct 8343239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 170
Target Start/End: Complemental strand, 18769261 - 18769153
Alignment:
Q  61 tcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagattttt 160  Q
    |||||||| ||| ||||||| ||| || || |||||| || | || |||||||||||| |||  |||| |||| |  |||||| ||||||||||||||||    
T  18769261 tcatacactcttgtacaccc-atgtactagaaagagaaaaaaggagatgaaagagaaaatgtatttgtgtggggtttacatgaccacgtgtcagattttt 18769163  T
Q  161 gtgtaggtgt 170  Q
    |||| |||||    
T  18769162 gtgtgggtgt 18769153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 29535499 - 29535451
Alignment:
Q  91 gaagagagaagacgaaatgaaagagaaagtgtgattgtatgggatccac 139  Q
    |||||||||| | || ||||||||||||||||| |||| ||||||||||    
T  29535499 gaagagagaataagagatgaaagagaaagtgtgtttgtgtgggatccac 29535451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 131
Target Start/End: Original strand, 32939639 - 32939679
Alignment:
Q  91 gaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    |||||||||||| || ||||||||||||||||| |||||||    
T  32939639 gaagagagaagaggagatgaaagagaaagtgtgtttgtatg 32939679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 2e-35; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 32 - 199
Target Start/End: Complemental strand, 32813429 - 32813262
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||  |||||||||||||| || |  |||||||||||||| ||||  |    
T  32813429 ggaaaatgttacatagacaccatttattcccatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcg 32813330  T
Q  132 ggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctgatgatgtc 199  Q
    || ||||  ||| |||||||||||||||||||| ||||| || || |||||| |||||| | ||||||    
T  32813329 gggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtc 32813262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 32 - 199
Target Start/End: Original strand, 51898601 - 51898768
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    ||||||||||||||| ||||| ||||||   |||||||||| |||||||||||||| |||||||||||||| || | |||| |||||||||| ||||  |    
T  51898601 ggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaatagaaagtgtgcttgtgcg 51898700  T
Q  132 ggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctgatgatgtc 199  Q
    |||||||| |||  ||||||||||||||||||| |||||||| || |||||| |||||| | ||||||    
T  51898701 ggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtc 51898768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 36 - 199
Target Start/End: Original strand, 27564657 - 27564820
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| ||||||| ||||||||||| |||||||||||||  |||||||||||||| || |  |||||||||||||| ||||  ||| |    
T  27564657 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 27564756  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctgatgatgtc 199  Q
    |||| |||| ||||||||||||||||||| ||||||||  | |||||| |||||| | ||||||    
T  27564757 ccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtc 27564820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 30 - 190
Target Start/End: Original strand, 11152294 - 11152454
Alignment:
Q  30 aaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgta 129  Q
    ||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||  ||||||||||||| || | |||| |||||| ||| ||||     
T  11152294 aaggaaaatgttatatagacaccatttattctcatacatccttctacaccccatgcactgggaagagagaagaggagaggaaaaagaaagcgtgcttgtg 11152393  T
Q  130 tgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
     ||| || ||||||  ||||||||||||||||||| | |||| | || |||||| ||||||    
T  11152394 cggggtctacatgactacgtgtcagatttttgtgtggatgtcgaagggtgtattgccacct 11152454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 32 - 188
Target Start/End: Complemental strand, 44454165 - 44454005
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatac----accccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattg 127  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||    ||||||||||  |||||||||||||| || | |||||| |||||||| |||    
T  44454165 ggaaaatgttacataaacaccatttattcttatacacccttatactctgaccccatgcattaggaagagagaagatgagaggaaagaaaaagtgtgcttg 44454066  T
Q  128 tatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccac 188  Q
    | |||||||||| | | ||| |||||||||||||||| ||| ||||  |||||||| ||||    
T  44454065 tgtgggatccacgtaaccacatgtcagatttttgtgtgggtatcaagagatgtattgccac 44454005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 43 - 190
Target Start/End: Complemental strand, 50630629 - 50630482
Alignment:
Q  43 catagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggatccacatg 142  Q
    |||||||||||||||||||||||||||||| ||||||| |||||  |||||||||||||| || |  |||||||||||||| ||||  ||| ||||| ||    
T  50630629 catagacaccatttattctcatacacccttgtacaccctatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtg 50630530  T
Q  143 atcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |  ||||||||||||||||||| |||  ||| ||||||||| ||||||    
T  50630529 actacgtgtcagatttttgtgtgggtaacaaaggatgtattgccacct 50630482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 36 - 190
Target Start/End: Original strand, 9474798 - 9474952
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||  ||||||||||||||||||| |||| ||||||||  |||||||||||||| || |  |||||||||||||| ||||  ||| |    
T  9474798 aatgatacatagacactctttattctcatacacccttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgtttgtgcggggt 9474897  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| |||  ||||||||||||||||||| |||||||| || |||||| ||||||    
T  9474898 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacct 9474952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 36 - 190
Target Start/End: Original strand, 47452242 - 47452396
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||  ||||||| |||||| |||| |||||||||||||  |||||||||||||| || |  |||||||||||||| ||||  |||||    
T  47452242 aatgatacatagacactctttattcccatacatccttgtacaccccatgcaataggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 47452341  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| |||  |||||| |||||||||||| |||||||| || |||||||||||||    
T  47452342 ccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattaccacct 47452396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 36 - 199
Target Start/End: Complemental strand, 37649376 - 37649213
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| ||||||| ||||||||||| |||||||||||||  |||||||||||||| || |  |||| ||||||||| ||||  || ||    
T  37649376 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagggaaagtgtgcttgtgcggaat 37649277  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctgatgatgtc 199  Q
     ||| ||| |||||||||||||||||||| |||||||| |  |||||| |||||| | ||||||    
T  37649276 tcacgtgaccacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaagatgtc 37649213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 36 - 183
Target Start/End: Complemental strand, 41758983 - 41758836
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| ||||||||||||||||||| |||||||||||||  |||||||||||||| || |  |||||||||||||| ||||  ||| |    
T  41758983 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgtttgtgcggggt 41758884  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtatt 183  Q
    |||  |||  ||||||||||||||||||| | |||||| || ||||||    
T  41758883 ccatgtgactacgtgtcagatttttgtgtggttgtcaaagggtgtatt 41758836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 36 - 190
Target Start/End: Original strand, 48716204 - 48716358
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||| ||||||| ||||||||||| |||||||||||||  |||||||||||||| ||||  ||||| |||||||| ||||  ||| |    
T  48716204 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggaaagaaaagataaagtgtgcttgtgcggggt 48716303  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| |||  ||||||||||||||||||| | ||||||  | |||||| ||||||    
T  48716304 ccacgtgactacgtgtcagatttttgtgtggatgtcaaatggtgtattgccacct 48716358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 27 - 173
Target Start/End: Original strand, 5958913 - 5959059
Alignment:
Q  27 tataaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgatt 126  Q
    |||||||||||||||||||||||||  |||| |  ||||||||||| ||||||||||| |  ||||||||||||||  | | ||||||||||||||  ||    
T  5958913 tataaggaaaatgttacatagacacattttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtactt 5959012  T
Q  127 gtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaa 173  Q
    ||  ||| |||| |||| ||| |||||||||||||||| ||||||||    
T  5959013 gtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaa 5959059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 31 - 171
Target Start/End: Original strand, 3302450 - 3302590
Alignment:
Q  31 aggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtat 130  Q
    |||||||||||| ||| ||| | ||||||  ||||||||||| ||||||| ||  |   ||||||||||||| || |||||| |||||||||| ||||||    
T  3302450 aggaaaatgttatataaacatcctttattaacatacacccttgtacaccctatatatttggaagagagaagatgagatgaaaaagaaagtgtgcttgtat 3302549  T
Q  131 gggatccacatgatcacgtgtcagatttttgtgtaggtgtc 171  Q
    ||| |||| ||||| ||||||||||||||||||| ||||||    
T  3302550 ggggtccatatgattacgtgtcagatttttgtgtgggtgtc 3302590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 36 - 190
Target Start/End: Complemental strand, 2582093 - 2581939
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||| ||||| |||||||| |||||||||| |||||| |||| |  |||||||||||||| || |  ||| |||||||||| ||||  ||| |    
T  2582093 aatgatacataaacaccctttattctaatacacccttgtacacctcatgtattaggaagagagaagaggagagaaaaaagaaagtgtgcttgtgcggggt 2581994  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| |||  ||||||||||||||||||| |||||||| || |||||| ||||||    
T  2581993 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacct 2581939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 36 - 190
Target Start/End: Complemental strand, 3000497 - 3000343
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||| |  |||||  ||||||||||| ||||||||||  |  |||||||||||||| || |  |||||||||||||| ||||| ||| |    
T  3000497 aatgatacatagacatccattatttccatacacccttgtacaccccatatattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacggggt 3000398  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| |||  ||||||||||||||||||| |||||||| || |||||| ||||||    
T  3000397 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacct 3000343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 32 - 190
Target Start/End: Original strand, 37926356 - 37926514
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    ||||||| ||| ||||||||||||||||| |||||| |||| |||||||||| ||  ||||||||||||||  | |  |||||||||||||  ||||| |    
T  37926356 ggaaaatattatatagacaccatttattcacatacatccttgtacaccccatacattaggaagagagaagagaagagaaaagagaaagtgtacttgtacg 37926455  T
Q  132 ggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||||||  ||  |||||||||||||||| ||| ||||| ||  |||||||| ||||||    
T  37926456 ggatccatgtggccacgtgtcagatttttatgtgggtgttaaaagatgtattgccacct 37926514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 36 - 190
Target Start/End: Complemental strand, 38595332 - 38595178
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||| |  |||||  ||||||||||| ||||||||||  |  |||||||||||||| || |  |||||||||||||| ||||| ||| |    
T  38595332 aatgatacatagacatccattatttccatacacccttgtacaccccatatattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacggggt 38595233  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| |||  ||||||||||||||||||| |||||||| || |||||| ||||||    
T  38595232 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacct 38595178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 32 - 190
Target Start/End: Original strand, 50590918 - 50591076
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    ||||||||||||||||| ||| |||| |  ||||||||||| ||||||||||| |  ||||||||||||||  | | ||||||||||||||  ||||  |    
T  50590918 ggaaaatgttacatagataccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 50591017  T
Q  132 ggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    || |||| |||  ||| |||||||||||||||| |||||||| || |||||| ||||||    
T  50591018 gggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacct 50591076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 36 - 183
Target Start/End: Complemental strand, 43310 - 43163
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||| ||| |||||||| |||||| ||| |||||||||||||  || |||||||| || || |  |||||||||||||| ||||  ||  |    
T  43310 aatgatacatagataccctttattcttatacactcttgtacaccccatgcattagaaagagagaggaggagagaaaagagaaagtgtgcttgtgcggagt 43211  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtatt 183  Q
    |||| |||  ||||||||||||||||||| |||||||| |||||||||    
T  43210 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtatt 43163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 32 - 183
Target Start/End: Complemental strand, 7740915 - 7740764
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    |||| |||| |||| || ||| ||||||||| |||| | || |||| |||||||| ||||||||||||||| || |||||| ||||| | |  |||| ||    
T  7740915 ggaagatgtcacatggataccctttattctcgtacatctttgtacatcccatgcaacaggaagagagaagaggagatgaaaaagaaaatatatttgtgtg 7740816  T
Q  132 ggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtatt 183  Q
    || |||||||   ||||||||| |||||| ||||||||||||||||||||||    
T  7740815 gggtccacatagccacgtgtcatatttttatgtaggtgtcaatggatgtatt 7740764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 46 - 164
Target Start/End: Original strand, 38632253 - 38632371
Alignment:
Q  46 agacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggatccacatgatc 145  Q
    ||||||| ||||||| ||||||||||| |||||||||||||  |||||||||||||| || |  ||||| |||||||| ||||  ||| ||||| |||      
T  38632253 agacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagaaaaagtgtgcttgtgcggggtccacgtgact 38632352  T
Q  146 acgtgtcagatttttgtgt 164  Q
    |||||||||||||||||||    
T  38632353 acgtgtcagatttttgtgt 38632371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 32 - 190
Target Start/End: Original strand, 41608411 - 41608569
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    ||||||||||||||| ||||| |||| |  ||||||||||| ||||||| ||| |  ||||||||||||||  | | ||||||||||||||  ||||| |    
T  41608411 ggaaaatgttacataaacaccttttaattgcatacacccttgtacaccctatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtacg 41608510  T
Q  132 ggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    || |||| |||  ||| ||||||||||||||||  ||||||| || |||||| ||||||    
T  41608511 gggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacct 41608569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 45044476 - 45044548
Alignment:
Q  30 aaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaaga 102  Q
    |||||||||||||| |||||| ||||||||||||||||||||| |||||||||| ||  ||||||||||||||    
T  45044476 aaggaaaatgttacgtagacatcatttattctcatacacccttgtacaccccatacattaggaagagagaaga 45044548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 34 - 173
Target Start/End: Original strand, 49811447 - 49811586
Alignment:
Q  34 aaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatggg 133  Q
    ||||||||||||||||||| ||||||||||||||||||| | |||| ||| ||  |||||||||||||| || |  |||||||||||||| ||||  ||     
T  49811447 aaaatgttacatagacaccctttattctcatacacccttgtgcaccacatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgga 49811546  T
Q  134 atccacatgatcacgtgtcagatttttgtgtaggtgtcaa 173  Q
     || | |||   ||||||||||||||||||| | ||||||    
T  49811547 gtctatatggctacgtgtcagatttttgtgtggatgtcaa 49811586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 30 - 190
Target Start/End: Complemental strand, 47748626 - 47748467
Alignment:
Q  30 aaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgta 129  Q
    ||||||||||||||||||||||| |||| |  ||||||| ||| ||||||||||| |  ||||||||||||||  | | |||||||||||| |  ||||     
T  47748626 aaggaaaatgttacatagacaccttttaattgcatacactcttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtatacttgtg 47748527  T
Q  130 tgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
     |||||||| |||  ||| |||||||||||| | | |||||||| || |||||| ||||||    
T  47748526 cgggatccatatggccacatgtcagatttttatatgggtgtcaa-gggtgtattgccacct 47748467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 36 - 190
Target Start/End: Original strand, 8346309 - 8346464
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagag-agaagacgaaatgaaagagaaagtgtgattgtatggga 134  Q
    |||| |||||| | |||||||||||||||||||| || ||||| |||||||  |||||||| | |||| || |  |||||||||||||| ||||   ||     
T  8346309 aatgatacataaataccatttattctcatacacctttgtacactccatgcattaggaagagaaaaagaggagagaaaagagaaagtgtgcttgtgcaggg 8346408  T
Q  135 tccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    ||||| |||  ||||||||||||||||||| ||||||||  | |||||| ||||||    
T  8346409 tccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacct 8346464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 190
Target Start/End: Complemental strand, 6261052 - 6260894
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    ||||||||||||||| |||||||||||| ||||||||| || ||||||| ||  || || ||||||||||| || | |||| ||||| |||| || |  |    
T  6261052 ggaaaatgttacatacacaccatttattttcatacacctttgtacaccctatatactagaaagagagaagaggagaagaaatagaaaatgtgcttatgcg 6260953  T
Q  132 ggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    || ||||| ||| ||| ||| |||||||| ||| |||||  | || |||||||||||||    
T  6260952 gggtccacgtgaccacatgttagatttttatgtgggtgttcaggggtgtattaccacct 6260894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 183
Target Start/End: Complemental strand, 13414910 - 13414792
Alignment:
Q  65 acacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgt 164  Q
    |||||||  ||||| |||||||  |||||||||||||| || |  ||||||||| |||| |||| |||| ||||| |||  |||||| ||||||||||||    
T  13414910 acaccctagtacactccatgcattaggaagagagaagatgatagaaaagagaaaatgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgt 13414811  T
Q  165 aggtgtcaatggatgtatt 183  Q
     |||||||| || ||||||    
T  13414810 gggtgtcaaagggtgtatt 13414792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 89 - 199
Target Start/End: Original strand, 44548351 - 44548461
Alignment:
Q  89 aggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccac 188  Q
    |||||||||||||| || |  |||||||||||||| ||||  ||| ||||| |||  ||||||||||||||||||| ||| ||||  | |||||| ||||    
T  44548351 aggaagagagaagaagagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaatggtgtattgccac 44548450  T
Q  189 ctgatgatgtc 199  Q
    || | ||||||    
T  44548451 ctaaagatgtc 44548461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 34339968 - 34340035
Alignment:
Q  34 aaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaaga 102  Q
    ||||||||||||||||||| |||||| ||| |||| ||| ||||||| ||||||  |||||||||||||    
T  34339968 aaaatgttacatagacaccttttattttca-acactcttgtacaccctatgcacttggaagagagaaga 34340035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 26274607 - 26274541
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaaga 102  Q
    |||| |||||||||||| ||||||| ||||||||||| | || | ||||||  ||||||||||||||    
T  26274607 aatgatacatagacaccctttattcccatacacccttgtgcatctcatgcattaggaagagagaaga 26274541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 173
Target Start/End: Original strand, 44332289 - 44332430
Alignment:
Q  32 ggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatg 131  Q
    ||||||||||||||||| ||| |||| |  ||||||||||| ||||| | ||| |  ||||||||||||||  | | |||||||||||| |  ||||  |    
T  44332289 ggaaaatgttacatagataccttttaattgcatacacccttgtacactctatgtattaggaagagagaagagaagaagaaagagaaagtatacttgtgcg 44332388  T
Q  132 ggatccacatgatcacgtgtcagatttttgtgtaggtgtcaa 173  Q
    || |||| | |  ||| |||||||||||| ||| ||||||||    
T  44332389 gggtccatagggccacatgtcagatttttatgtgggtgtcaa 44332430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 33 - 199
Target Start/End: Original strand, 848 - 1014
Alignment:
Q  33 gaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgg 132  Q
    |||||||||||||| ||||| ||||||| ||||||| ||| |||||||||||||| |||||||||||||| || | ||||||||||||||| ||||  ||    
T  848 gaaaatgttacataaacaccctttattcccatacactcttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgcgg 947  T
Q  133 gatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctgatgatgtc 199  Q
    ||| ||| |||  ||||||||| ||||||||| | ||| || || |||||| |||||| | ||||||    
T  948 gattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtc 1014  T

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Target: scaffold1267 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 33 - 199
Target Start/End: Original strand, 848 - 1014
Alignment:
Q  33 gaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgg 132  Q
    |||||||||||||| ||||| ||||||| ||||||| ||| |||||||||||||| |||||||||||||| || | ||||||||||||||| ||||  ||    
T  848 gaaaatgttacataaacaccctttattcccatacactcttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgcgg 947  T
Q  133 gatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctgatgatgtc 199  Q
    ||| ||| |||  ||||||||| ||||||||| | ||| || || |||||| |||||| | ||||||    
T  948 gattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtc 1014  T

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Target: scaffold0237 (Bit Score: 59; Significance: 3e-25; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 36 - 170
Target Start/End: Complemental strand, 4207 - 4073
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| |||||||||||||||||||| ||||||||||| |||||||||||||  ||||||||||||||  | |  |||||||||||||| || |  |||||    
T  4207 aatgatacatagacaccatttattcccatacacccttgtacaccccatgcattaggaagagagaagagaagagaaaagagaaagtgtgcttatgcgggat 4108  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgt 170  Q
    |||| | |  ||||||||||||||||||| |||||    
T  4107 ccacgtaactacgtgtcagatttttgtgtgggtgt 4073  T

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Target: scaffold0018 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 33 - 189
Target Start/End: Complemental strand, 152679 - 152523
Alignment:
Q  33 gaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgg 132  Q
    |||||||||||||||||||| |||| |  ||||||||||| |||| |||||| |  || |||||||||||  | | ||||||||||||||  ||||  ||    
T  152679 gaaaatgttacatagacaccttttaattgcatacacccttgtacatcccatgtattagaaagagagaagagaagaagaaagagaaagtgtatttgtgcgg 152580  T
Q  133 gatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacc 189  Q
    |||||| |||| ||| |||||||||||||||| |||||||| || |||||| |||||    
T  152579 gatccatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacc 152523  T

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Target: scaffold0110 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 30 - 173
Target Start/End: Original strand, 8779 - 8922
Alignment:
Q  30 aaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgta 129  Q
    ||||||||||||||||||||||| |||||||| |||||||||| ||||||||||  |  |||||||||||||| |  | |||||||||| |||  ||||     
T  8779 aaggaaaatgttacatagacaccttttattcttatacacccttgtacaccccatatattaggaagagagaagatgggaggaaagagaaaatgtacttgtg 8878  T
Q  130 tgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaa 173  Q
    |||| ||||| |||  | |||||| |||||||||||| ||||||    
T  8879 tggggtccacgtgactatgtgtcaaatttttgtgtagatgtcaa 8922  T

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Target: scaffold0321 (Bit Score: 55; Significance: 8e-23; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 36 - 190
Target Start/End: Original strand, 10031 - 10185
Alignment:
Q  36 aatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaagtgtgattgtatgggat 135  Q
    |||| ||||||||||||  |||||  ||||||||||| ||||||| |||||  |||||||||||||| || |  |||||||||||||| ||||| | | |    
T  10031 aatgatacatagacacccattatttccatacacccttgtacaccctatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtacgcggt 10130  T
Q  136 ccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacct 190  Q
    |||| |||  ||||||||||||||| ||| | |||||| ||||||||| ||||||    
T  10131 ccacgtgactacgtgtcagatttttatgtggatgtcaaaggatgtattgccacct 10185  T

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Target: scaffold0316 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 17287 - 17199
Alignment:
Q  30 aaggaaaatgttacatagacaccatttattctcatacacccttatacaccccatgcaccaggaagagagaagacgaaatgaaagagaaa 118  Q
    ||||||||||||||||||||||| ||||||  |||||||| || ||||||  ||   | |||||||||||||| || | ||||||||||    
T  17287 aaggaaaatgttacatagacaccctttatttccatacacctttgtacaccttatattctaggaagagagaagaggagaggaaagagaaa 17199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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