View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21359_high_10 (Length: 477)
Name: NF21359_high_10
Description: NF21359
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21359_high_10 |
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Alignment Details
Target: chr7 (Bit Score: 430; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 430; E-Value: 0
Query Start/End: Original strand, 10 - 459
Target Start/End: Original strand, 41924181 - 41924630
Alignment:
| Q |
10 |
aagaatataaaggatgcaaggaaggtgtttgatgaaatgattcaaagaaatgttgttcctaatactgtgacttttaatacgcttattgatgggtattgta |
109 |
Q |
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| T |
41924181 |
aagaaaataaaggatgcaaggaaggtgtttgatgaaatgattcaaagaaatgttgttcctaatactgtgacttttaatacgcttattgatgggtattgta |
41924280 |
T |
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| Q |
110 |
aggtgggtggaatagacgaagcttttagattgagggctaggatgaatggtccgtattcgaaggctaatgttgttacttacaattgcttgttaagtggtct |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41924281 |
aggtgggtggaatagacgaagcttttagattgagggctaggatgaatggtccgtattcgaaggctaatgttgttacttacaattgcttgttaagtggtct |
41924380 |
T |
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| Q |
210 |
ttgtggtttggggagattggaagatgctaagagggtgttgttggagatggaaaggaaaggttttttgcctggggggttttcgagtcttgtatttgatgat |
309 |
Q |
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| T |
41924381 |
ttgtggtttggggagattggaagatgctaagagggtgttgttggagatggaaaggaaaggttttttgcctagggggttttcgagtcttgtatttgatgat |
41924480 |
T |
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| Q |
310 |
cagttgatgggtggaaatgaaaatggtttgttaaatggaaatggaacacaggtcgatgagtggacttgtaatgctttgttgaatggactttgcaaggtag |
409 |
Q |
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||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
41924481 |
cagttgatgagtggaaatgaaaatggtttgttaaatggaaatggaacacaggtcgatgagtggacttgtaatgctttgttgaatggactgtgcaaggtag |
41924580 |
T |
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| Q |
410 |
gaaaggttgaaaaggccaaagaggttttggcaaagctagaaagtaatgga |
459 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
41924581 |
gaaaggttgaaaaggccaaagagattttggcaaagctagaaagtaatgga |
41924630 |
T |
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