View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21359_high_25 (Length: 363)
Name: NF21359_high_25
Description: NF21359
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21359_high_25 |
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Alignment Details
Target: chr2 (Bit Score: 253; Significance: 1e-140; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 14 - 348
Target Start/End: Original strand, 1926693 - 1927029
Alignment:
| Q |
14 |
agggcctagggataaagataccttaaggtgtctaatgaggtttaaagatcctaattattgtcaaataat-ttgcaaaattgttgtttttacgtagcagct |
112 |
Q |
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|||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||| ||||| |
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| T |
1926693 |
agggcctagggataaagataccttcaggtgtttaatgaggtttaaagatcctaattattgtctaataaggttgcaaaattgttacttttacgtaacagct |
1926792 |
T |
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| Q |
113 |
aaaactcatgcacacgataaaatcttgagttcaaatataaatgaagatgttcagtttaacaatatcgacattatcactctcgtttaaaatagaaatatgt |
212 |
Q |
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||||||||| |||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
1926793 |
aaaactcatacacacgataagattttgagttcaaatataaatgaagatgttcaatttaacaatatcgacattatcactctcgtttaaaataggaatatgt |
1926892 |
T |
|
| Q |
213 |
gaagtcggcatcgattctaaaattataatataacacc-acggattccaatcacaaaattgattgaagtttacgggtcccaaccaatcttttctctccagc |
311 |
Q |
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|||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |
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| T |
1926893 |
gaagtcggcatcaattctaaaattataatataacacctacggattccaatcacaaaattgattaaagtttacggttcccaaccaatcttttctctccagc |
1926992 |
T |
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| Q |
312 |
taaattaagagataaaaccttgtctcatattgaagat |
348 |
Q |
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||| |||||||||||||| |||||||||||||||||| |
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| T |
1926993 |
taatttaagagataaaacattgtctcatattgaagat |
1927029 |
T |
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