View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21359_high_9 (Length: 487)
Name: NF21359_high_9
Description: NF21359
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21359_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 416; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 416; E-Value: 0
Query Start/End: Original strand, 17 - 471
Target Start/End: Original strand, 32011327 - 32011782
Alignment:
| Q |
17 |
atgaatcacatatcttacctatctttcatttaacatatatctctctccttaaaatgannnnnnnn-ctttgaaggcaaccaatcatatcaacataacttt |
115 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
32011327 |
atgagtcacatatcttacctatctttcatttaacatatatctctctccttaaaatgatttttttttctttgaaggcaaccaatcatatcaacataacttt |
32011426 |
T |
|
| Q |
116 |
gtgaactaaaattgtaattaataacaagaataattttgttgttatggagtcttataaaaattccatcaaatcttctacatatatataaacatcacatgtt |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32011427 |
gtgaactaaaattgtaattaataacaagaataattttgttgttatggagtcttataaaaattccatcaaatcttctacatatatataaacatcacatgtt |
32011526 |
T |
|
| Q |
216 |
gtgtttttcttttgttaatctttgttaatatcttgctcttatgtagattttgcaactattttgttgagagaaccttcagcgtaagactgagtgctagagt |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32011527 |
gtgtttttcttttgttaatctttgttaatatcttgctcttatgtagattttgcaactattttgttgagagaaccttcagcgtaagactgagtgctagagt |
32011626 |
T |
|
| Q |
316 |
tgtagcaagcaaagttaagaagattccttctccctcctctcgcctttcccttatgcatggcatttctaaatcctcctcgtcctcttctctctttcttatc |
415 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32011627 |
tgtagcaagcaaagttaagaagattccttctccctcctctcgcctttcccttatgcatggcatttctaaatcctcctcgtcctcttctctctttcttatc |
32011726 |
T |
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| Q |
416 |
aggtttctgttaaaaaggaataaaaaacaaagtttaaccaattggatagaataaaa |
471 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32011727 |
aggttcctgttaaaaaggaataaaaaacaaagtttaaccaattggatagaataaaa |
32011782 |
T |
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