View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21359_low_16 (Length: 430)
Name: NF21359_low_16
Description: NF21359
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21359_low_16 |
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Alignment Details
Target: chr6 (Bit Score: 358; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 358; E-Value: 0
Query Start/End: Original strand, 1 - 409
Target Start/End: Original strand, 26504260 - 26504671
Alignment:
| Q |
1 |
tcttgaatttaaccactttaagctcgctgaaacttggccaccgacattttgtaagattaatacttgtattgatgattataggccaatgaagtttattata |
100 |
Q |
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| T |
26504260 |
tcttgaatttaaccactttaagctcgctgaaacttggccaccgacattttgtaagattaatacttgtatcgatgattataggccaatgaagtttatcata |
26504359 |
T |
|
| Q |
101 |
cacggactttggccaggtgatttaacaaattgcgacccagataaaaagatgaaaccagattatgaaaaggtaaactatattttatttgttcacatttatt |
200 |
Q |
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| T |
26504360 |
cacggactttggccaggtgatttaacagattgcgacccagataaaaagatgaaaccagattatgaaaaggtaagctatattttatttgttcacatttatt |
26504459 |
T |
|
| Q |
201 |
tttactttaacttgcatgcatgcatgatcaagaattaacttatc---tttattttttgatttattttaccagcttactggaatatatcctaaactcgttc |
297 |
Q |
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| T |
26504460 |
tttactttaacttgcatgcatgcatgatcaagaattaacttatctttttttttttttgatttattttaccagcttagtggaatatatcctaaactcattg |
26504559 |
T |
|
| Q |
298 |
aagattggccaaatttacataaagttaaaaataagtttccagtggaaactaacaaagagttatggttttttgagtggtataagcatggaacttgttcagc |
397 |
Q |
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| T |
26504560 |
aagattggccaaatttacataaagttaaaaataagtttccagtggaaacaaacaaagagttatggttttttgagtggtataagcatggaacttgttcagc |
26504659 |
T |
|
| Q |
398 |
ccagttgttcac |
409 |
Q |
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| T |
26504660 |
ccagctgttcac |
26504671 |
T |
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