View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21359_low_6 (Length: 608)

Name: NF21359_low_6
Description: NF21359
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21359_low_6
NF21359_low_6
[»] chr2 (60 HSPs)
chr2 (315-607)||(10157458-10157730)
chr2 (1-73)||(3055563-3055635)
chr2 (1-73)||(4683985-4684057)
chr2 (1-73)||(13197763-13197835)
chr2 (1-73)||(15896847-15896919)
chr2 (1-73)||(37990066-37990138)
chr2 (1-73)||(41478692-41478764)
chr2 (1-73)||(44397552-44397624)
chr2 (1-73)||(44398691-44398763)
chr2 (1-73)||(16044370-16044442)
chr2 (1-73)||(37666663-37666735)
chr2 (1-76)||(15372228-15372303)
chr2 (1-68)||(16243836-16243903)
chr2 (1-73)||(6648572-6648644)
chr2 (1-73)||(13344489-13344561)
chr2 (1-73)||(38917575-38917647)
chr2 (1-68)||(9047808-9047875)
chr2 (1-67)||(41492949-41493015)
chr2 (4-76)||(12170455-12170527)
chr2 (1-73)||(12337990-12338062)
chr2 (1-66)||(30099235-30099300)
chr2 (1-66)||(31150665-31150730)
chr2 (165-212)||(10158134-10158181)
chr2 (24-76)||(41492898-41492950)
chr2 (6-59)||(16734802-16734855)
chr2 (6-47)||(41453090-41453131)
chr2 (1-50)||(44804631-44804680)
chr2 (24-76)||(3055634-3055686)
chr2 (24-76)||(6648521-6648573)
chr2 (24-76)||(9047757-9047809)
chr2 (94-161)||(10157982-10158052)
chr2 (24-76)||(12337939-12337991)
chr2 (24-76)||(13197712-13197764)
chr2 (20-76)||(13724104-13724160)
chr2 (24-76)||(15372302-15372354)
chr2 (24-76)||(15896918-15896970)
chr2 (24-76)||(37990015-37990067)
chr2 (24-76)||(38917524-38917576)
chr2 (24-76)||(41478641-41478693)
chr2 (24-76)||(44398762-44398814)
chr2 (20-67)||(23227344-23227391)
chr2 (1-72)||(36688888-36688959)
chr2 (24-73)||(10069283-10069332)
chr2 (7-63)||(4553069-4553125)
chr2 (556-604)||(7783494-7783542)
chr2 (24-76)||(13344560-13344612)
chr2 (24-76)||(16044319-16044371)
chr2 (24-68)||(16243793-16243837)
chr2 (24-76)||(30099184-30099236)
chr2 (24-64)||(36089457-36089497)
chr2 (24-76)||(37666612-37666664)
chr2 (24-68)||(44397623-44397667)
chr2 (13-76)||(30852682-30852745)
chr2 (24-75)||(44804581-44804632)
chr2 (20-63)||(45294395-45294438)
chr2 (34-76)||(23227274-23227316)
chr2 (22-63)||(12170414-12170455)
chr2 (26-71)||(23986785-23986830)
chr2 (20-73)||(40714014-40714067)
chr2 (24-72)||(20900670-20900718)
[»] chr7 (45 HSPs)
chr7 (1-73)||(9268761-9268833)
chr7 (1-73)||(1565782-1565854)
chr7 (1-73)||(1738500-1738572)
chr7 (1-73)||(7240754-7240826)
chr7 (1-73)||(23314192-23314264)
chr7 (1-73)||(31319452-31319524)
chr7 (1-73)||(38063966-38064038)
chr7 (1-73)||(46840865-46840937)
chr7 (1-76)||(22285701-22285776)
chr7 (1-76)||(36016249-36016324)
chr7 (1-73)||(7482230-7482302)
chr7 (1-73)||(28536804-28536876)
chr7 (1-73)||(36583400-36583472)
chr7 (1-68)||(94371-94438)
chr7 (1-73)||(38441465-38441537)
chr7 (1-76)||(9575411-9575486)
chr7 (1-73)||(4790253-4790325)
chr7 (1-62)||(33418392-33418453)
chr7 (24-76)||(38063915-38063967)
chr7 (4-68)||(40840175-40840239)
chr7 (102-161)||(29410557-29410616)
chr7 (24-76)||(1738449-1738501)
chr7 (24-76)||(7240825-7240877)
chr7 (24-76)||(7482301-7482353)
chr7 (24-76)||(7661152-7661204)
chr7 (24-76)||(9268832-9268884)
chr7 (24-76)||(22285775-22285827)
chr7 (24-76)||(36016198-36016250)
chr7 (24-76)||(46840936-46840988)
chr7 (31-76)||(23314141-23314186)
chr7 (24-73)||(38441536-38441585)
chr7 (24-76)||(94320-94372)
chr7 (24-76)||(31319401-31319453)
chr7 (24-68)||(33418452-33418496)
chr7 (24-76)||(36583471-36583523)
chr7 (24-68)||(46877666-46877710)
chr7 (1-76)||(7269458-7269533)
chr7 (24-63)||(28469496-28469535)
chr7 (24-63)||(36033241-36033280)
chr7 (25-68)||(40840129-40840172)
chr7 (24-73)||(4790324-4790373)
chr7 (25-66)||(7661088-7661129)
chr7 (24-64)||(1565743-1565783)
chr7 (24-68)||(9575485-9575529)
chr7 (24-76)||(28536753-28536805)
[»] chr5 (43 HSPs)
chr5 (1-73)||(23359947-23360019)
chr5 (1-73)||(9395355-9395427)
chr5 (1-73)||(37149008-37149080)
chr5 (1-76)||(26350403-26350478)
chr5 (1-66)||(11795180-11795245)
chr5 (1-66)||(36563591-36563656)
chr5 (1-73)||(582994-583066)
chr5 (1-73)||(13033056-13033128)
chr5 (1-73)||(13103029-13103101)
chr5 (1-73)||(20848079-20848151)
chr5 (1-73)||(41989460-41989532)
chr5 (1-68)||(4443970-4444037)
chr5 (1-73)||(17025629-17025701)
chr5 (1-73)||(37641958-37642031)
chr5 (1-66)||(38361744-38361809)
chr5 (1-54)||(21575970-21576023)
chr5 (1-57)||(6126845-6126901)
chr5 (1-68)||(13539920-13539983)
chr5 (24-76)||(6126900-6126952)
chr5 (24-76)||(9395426-9395478)
chr5 (24-76)||(13103100-13103152)
chr5 (24-76)||(17025700-17025752)
chr5 (24-76)||(36563540-36563592)
chr5 (24-76)||(41989409-41989461)
chr5 (24-73)||(23360018-23360067)
chr5 (20-64)||(2366352-2366396)
chr5 (6-74)||(3549605-3549673)
chr5 (24-76)||(11795244-11795296)
chr5 (24-76)||(13033127-13033179)
chr5 (24-76)||(21576022-21576074)
chr5 (22-66)||(27081014-27081058)
chr5 (24-76)||(37148957-37149009)
chr5 (24-76)||(37642030-37642082)
chr5 (24-75)||(4444036-4444087)
chr5 (24-75)||(9006885-9006936)
chr5 (1-76)||(39290777-39290851)
chr5 (34-68)||(11574166-11574200)
chr5 (24-61)||(2629620-2629657)
chr5 (23-68)||(3549557-3549602)
chr5 (20-72)||(9188495-9188548)
chr5 (7-68)||(13284695-13284756)
chr5 (4-37)||(35904440-35904473)
chr5 (24-68)||(36595784-36595828)
[»] chr8 (50 HSPs)
chr8 (1-76)||(31654615-31654690)
chr8 (1-73)||(54665-54737)
chr8 (1-73)||(2890215-2890287)
chr8 (1-73)||(3304331-3304403)
chr8 (1-73)||(6552660-6552732)
chr8 (1-73)||(7785831-7785903)
chr8 (1-73)||(7805752-7805824)
chr8 (1-73)||(12343193-12343265)
chr8 (1-73)||(32114528-32114600)
chr8 (1-73)||(43199407-43199479)
chr8 (1-73)||(44498240-44498312)
chr8 (1-66)||(25601053-25601118)
chr8 (1-73)||(12763707-12763779)
chr8 (1-73)||(15888405-15888477)
chr8 (1-73)||(32211416-32211488)
chr8 (1-73)||(39571256-39571328)
chr8 (1-73)||(7012176-7012248)
chr8 (1-73)||(33289314-33289386)
chr8 (1-76)||(8587172-8587247)
chr8 (1-64)||(13578871-13578934)
chr8 (16-73)||(4245649-4245706)
chr8 (1-73)||(28463616-28463688)
chr8 (24-76)||(25601002-25601054)
chr8 (24-76)||(54614-54666)
chr8 (24-76)||(2890164-2890216)
chr8 (24-76)||(6552731-6552783)
chr8 (24-76)||(7785780-7785832)
chr8 (7-75)||(17006914-17006982)
chr8 (7-75)||(17570265-17570333)
chr8 (10-66)||(24692040-24692096)
chr8 (24-76)||(33289263-33289315)
chr8 (24-76)||(39571205-39571257)
chr8 (24-76)||(43199356-43199408)
chr8 (24-76)||(3304280-3304332)
chr8 (24-76)||(7805701-7805753)
chr8 (24-68)||(12343150-12343194)
chr8 (24-76)||(12763656-12763708)
chr8 (24-68)||(27422266-27422310)
chr8 (24-76)||(32211365-32211417)
chr8 (24-76)||(44498189-44498241)
chr8 (4-63)||(28999104-28999163)
chr8 (1-73)||(27422198-27422267)
chr8 (24-73)||(7012247-7012296)
chr8 (21-66)||(13246806-13246851)
chr8 (24-73)||(31654689-31654738)
chr8 (556-608)||(14372932-14372984)
chr8 (24-68)||(15688040-15688084)
chr8 (24-64)||(15888366-15888406)
chr8 (20-76)||(30171484-30171540)
chr8 (24-76)||(32114477-32114529)
[»] chr4 (58 HSPs)
chr4 (1-76)||(43900551-43900626)
chr4 (1-73)||(3372126-3372198)
chr4 (1-73)||(20538739-20538811)
chr4 (1-73)||(24704375-24704447)
chr4 (1-73)||(47833616-47833688)
chr4 (1-73)||(48336268-48336340)
chr4 (1-73)||(53337375-53337447)
chr4 (1-73)||(3992981-3993053)
chr4 (1-73)||(6121946-6122018)
chr4 (1-73)||(26231582-26231654)
chr4 (1-73)||(33551206-33551278)
chr4 (1-73)||(42797737-42797809)
chr4 (1-73)||(46797730-46797802)
chr4 (1-64)||(33621810-33621873)
chr4 (5-76)||(40913246-40913317)
chr4 (1-68)||(52756685-52756752)
chr4 (4-73)||(3904739-3904808)
chr4 (1-66)||(47838670-47838735)
chr4 (1-73)||(7579315-7579387)
chr4 (1-68)||(41469819-41469886)
chr4 (4-71)||(41615732-41615799)
chr4 (4-64)||(5986890-5986950)
chr4 (1-73)||(51894635-51894707)
chr4 (6-76)||(25855085-25855155)
chr4 (1-66)||(3422073-3422137)
chr4 (4-67)||(29845656-29845719)
chr4 (24-76)||(4780371-4780423)
chr4 (24-76)||(42797808-42797860)
chr4 (6-68)||(17236845-17236908)
chr4 (1-63)||(50430471-50430533)
chr4 (24-76)||(3422136-3422188)
chr4 (24-76)||(6121895-6121947)
chr4 (24-76)||(24704446-24704498)
chr4 (24-76)||(41469768-41469820)
chr4 (24-76)||(47833687-47833739)
chr4 (24-76)||(47838619-47838671)
chr4 (24-76)||(51894584-51894636)
chr4 (22-76)||(3904685-3904739)
chr4 (22-68)||(5986950-5986996)
chr4 (10-67)||(6924746-6924802)
chr4 (7-64)||(17344227-17344284)
chr4 (31-76)||(40913191-40913236)
chr4 (31-76)||(46797808-46797853)
chr4 (24-76)||(3372197-3372249)
chr4 (24-76)||(3993052-3993104)
chr4 (24-76)||(20538688-20538740)
chr4 (24-76)||(33621872-33621924)
chr4 (24-76)||(48336339-48336391)
chr4 (24-76)||(53337446-53337498)
chr4 (22-68)||(41615686-41615732)
chr4 (22-68)||(45725930-45725976)
chr4 (31-72)||(1716382-1716423)
chr4 (24-73)||(7579386-7579435)
chr4 (24-73)||(43900625-43900674)
chr4 (31-76)||(44900082-44900127)
chr4 (24-76)||(1716303-1716355)
chr4 (24-64)||(9876653-9876693)
chr4 (24-68)||(52756751-52756795)
[»] chr3 (58 HSPs)
chr3 (1-76)||(17653714-17653789)
chr3 (1-76)||(37508923-37508998)
chr3 (1-73)||(4238599-4238671)
chr3 (1-73)||(10297984-10298056)
chr3 (1-73)||(19557105-19557177)
chr3 (1-73)||(22721936-22722008)
chr3 (1-73)||(44785449-44785521)
chr3 (1-73)||(49823434-49823506)
chr3 (1-68)||(2787885-2787952)
chr3 (1-68)||(8817439-8817506)
chr3 (1-68)||(35513483-35513550)
chr3 (1-76)||(36095733-36095808)
chr3 (1-76)||(46208032-46208107)
chr3 (1-73)||(8437430-8437502)
chr3 (1-73)||(21295379-21295451)
chr3 (1-73)||(34080083-34080155)
chr3 (1-73)||(38964397-38964469)
chr3 (1-73)||(48340402-48340474)
chr3 (1-73)||(51406678-51406750)
chr3 (1-68)||(9111547-9111614)
chr3 (1-68)||(40691049-40691116)
chr3 (1-67)||(6013389-6013455)
chr3 (1-66)||(33942985-33943050)
chr3 (1-73)||(42507408-42507480)
chr3 (1-73)||(42170399-42170471)
chr3 (24-76)||(21295328-21295380)
chr3 (23-67)||(33128217-33128261)
chr3 (24-76)||(46208106-46208158)
chr3 (6-70)||(8951954-8952018)
chr3 (20-76)||(9213588-9213644)
chr3 (24-76)||(10298055-10298107)
chr3 (24-76)||(19557054-19557106)
chr3 (25-69)||(26001141-26001185)
chr3 (24-76)||(34080032-34080084)
chr3 (24-76)||(38964468-38964520)
chr3 (24-76)||(40690998-40691050)
chr3 (24-76)||(42170348-42170400)
chr3 (6-66)||(43323072-43323132)
chr3 (24-76)||(48340473-48340525)
chr3 (24-76)||(49823383-49823435)
chr3 (24-75)||(9111497-9111548)
chr3 (24-75)||(42507358-42507409)
chr3 (24-73)||(4238670-4238719)
chr3 (24-73)||(17653788-17653837)
chr3 (24-73)||(37508997-37509046)
chr3 (24-76)||(2787834-2787886)
chr3 (32-76)||(6013338-6013382)
chr3 (24-76)||(8437501-8437553)
chr3 (24-68)||(8817396-8817440)
chr3 (24-76)||(9027144-9027196)
chr3 (24-68)||(22722007-22722051)
chr3 (24-76)||(51406749-51406801)
chr3 (17-76)||(9213518-9213577)
chr3 (24-66)||(1262279-1262321)
chr3 (10-76)||(2131734-2131800)
chr3 (24-66)||(33942944-33942986)
chr3 (24-73)||(44785401-44785450)
chr3 (20-64)||(5323279-5323323)
[»] scaffold0482 (2 HSPs)
scaffold0482 (1-73)||(12865-12937)
scaffold0482 (24-76)||(12936-12988)
[»] scaffold0204 (2 HSPs)
scaffold0204 (1-73)||(23790-23862)
scaffold0204 (24-76)||(23861-23913)
[»] chr6 (41 HSPs)
chr6 (1-73)||(2830340-2830412)
chr6 (1-73)||(6330120-6330192)
chr6 (1-73)||(8383022-8383094)
chr6 (1-73)||(11572198-11572270)
chr6 (1-73)||(26602328-26602400)
chr6 (1-73)||(33052847-33052919)
chr6 (1-76)||(8417846-8417921)
chr6 (1-68)||(13853646-13853713)
chr6 (1-73)||(8099535-8099607)
chr6 (1-73)||(35031054-35031126)
chr6 (1-66)||(6143566-6143631)
chr6 (1-73)||(9644701-9644773)
chr6 (1-73)||(9650718-9650790)
chr6 (1-73)||(6068571-6068643)
chr6 (1-62)||(28747187-28747248)
chr6 (1-73)||(13043763-13043835)
chr6 (5-68)||(6068997-6069060)
chr6 (1-75)||(14936510-14936584)
chr6 (22-76)||(3788111-3788165)
chr6 (21-59)||(6549902-6549940)
chr6 (24-76)||(2830411-2830463)
chr6 (24-76)||(6330191-6330243)
chr6 (24-76)||(8099606-8099658)
chr6 (24-76)||(8382971-8383023)
chr6 (24-76)||(9644772-9644824)
chr6 (24-76)||(9650789-9650841)
chr6 (24-76)||(11572147-11572199)
chr6 (24-76)||(13853595-13853647)
chr6 (24-76)||(26602399-26602451)
chr6 (1-48)||(17992018-17992065)
chr6 (1-76)||(22896473-22896539)
chr6 (24-76)||(6068642-6068694)
chr6 (24-68)||(8417803-8417847)
chr6 (24-67)||(28747145-28747188)
chr6 (34-67)||(12473651-12473684)
chr6 (24-73)||(35031006-35031055)
chr6 (24-68)||(8186443-8186487)
chr6 (24-76)||(14936459-14936511)
chr6 (24-68)||(22896538-22896582)
chr6 (24-76)||(32045157-32045209)
chr6 (24-68)||(33052804-33052848)
[»] chr1 (47 HSPs)
chr1 (1-73)||(9981652-9981724)
chr1 (1-76)||(17556754-17556830)
chr1 (1-73)||(26471118-26471190)
chr1 (1-73)||(27159411-27159483)
chr1 (1-73)||(31842848-31842920)
chr1 (1-73)||(39402019-39402091)
chr1 (1-73)||(44668146-44668218)
chr1 (1-73)||(47216752-47216824)
chr1 (1-68)||(14984847-14984914)
chr1 (1-73)||(1050893-1050965)
chr1 (1-73)||(11795938-11796010)
chr1 (1-73)||(23278054-23278126)
chr1 (1-73)||(34042701-34042773)
chr1 (1-73)||(44955259-44955331)
chr1 (1-73)||(47588390-47588462)
chr1 (1-68)||(47777534-47777601)
chr1 (1-76)||(25694321-25694396)
chr1 (4-73)||(12483684-12483753)
chr1 (1-68)||(47969704-47969772)
chr1 (6-76)||(11897056-11897126)
chr1 (1-76)||(16448161-16448236)
chr1 (24-76)||(11897130-11897182)
chr1 (4-76)||(12213530-12213602)
chr1 (1-76)||(37552143-37552218)
chr1 (22-76)||(12483630-12483684)
chr1 (6-63)||(11989796-11989853)
chr1 (24-76)||(11796009-11796061)
chr1 (24-76)||(14984913-14984965)
chr1 (24-76)||(17556829-17556881)
chr1 (24-76)||(25694395-25694447)
chr1 (24-76)||(27159360-27159412)
chr1 (24-76)||(31842797-31842849)
chr1 (24-76)||(39401968-39402020)
chr1 (24-76)||(44668095-44668147)
chr1 (24-68)||(44955216-44955260)
chr1 (24-76)||(47777483-47777535)
chr1 (24-75)||(9981723-9981774)
chr1 (24-71)||(12062635-12062682)
chr1 (24-76)||(1050964-1051016)
chr1 (20-68)||(5392218-5392266)
chr1 (24-76)||(26471067-26471119)
chr1 (24-76)||(34042772-34042824)
chr1 (24-68)||(37552217-37552261)
chr1 (24-76)||(47216701-47216753)
chr1 (21-66)||(12043616-12043661)
chr1 (20-76)||(11989853-11989909)
chr1 (24-68)||(12043679-12043723)
[»] scaffold1707 (2 HSPs)
scaffold1707 (1-68)||(1345-1412)
scaffold1707 (24-66)||(1411-1453)
[»] scaffold0009 (2 HSPs)
scaffold0009 (4-73)||(49510-49579)
scaffold0009 (22-76)||(49579-49633)
[»] scaffold0464 (2 HSPs)
scaffold0464 (1-73)||(6184-6256)
scaffold0464 (24-76)||(6133-6185)
[»] scaffold0415 (1 HSPs)
scaffold0415 (4-67)||(13782-13845)
[»] scaffold0064 (1 HSPs)
scaffold0064 (97-161)||(18757-18821)
[»] scaffold0011 (2 HSPs)
scaffold0011 (3-76)||(231358-231431)
scaffold0011 (31-76)||(231305-231350)
[»] scaffold0650 (1 HSPs)
scaffold0650 (6-76)||(43-112)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-75)||(12406-12480)


Alignment Details
Target: chr2 (Bit Score: 216; Significance: 1e-118; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 315 - 607
Target Start/End: Complemental strand, 10157730 - 10157458
Alignment:
Q  315 ctattagttgtccttattaacagggtaacaaccaaaagtaagtaacttaactgaccttttttgtttgtttgttacaaaacgaaagtttctattaaccttt 414  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10157730 ctattagttgtccttattaacaaggtaacaaccaaaagtaagtaacttaactgaccttttttgtttgtttgttacaaaacgaaagtttctattaaccttt 10157631  T
Q  415 ctattttttccgtttgagatttgtctaattacccgttttctagcaaaatttcaaaactcttagtaagattgcaatgtccattgcaacatcatcatagtag 514  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  10157630 ctattttttccgtttgagatttgtctaattacccgttttctagcaaaatttcaaaaatcttagtaagattgcaatgtccattgcaacatcatcataatag 10157531  T
Q  515 aagaaagtttcatatgataatattatcatgtacaataccatgccaatgtttggtttgacgttcaaccacttttattcgcgtttgacaactctt 607  Q
    ||||||||||||||||||||||||||                    |||||||||||||||||||||||||||||||||||||||||||||||    
T  10157530 aagaaagtttcatatgataatattat--------------------tgtttggtttgacgttcaaccacttttattcgcgtttgacaactctt 10157458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 3055635 - 3055563
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  3055635 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 3055563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 4683985 - 4684057
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  4683985 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 4684057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 13197763 - 13197835
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  13197763 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 13197835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 15896919 - 15896847
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  15896919 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 15896847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 37990066 - 37990138
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  37990066 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 37990138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 41478692 - 41478764
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  41478692 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 41478764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 44397624 - 44397552
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  44397624 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 44397552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 44398763 - 44398691
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  44398763 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 44398691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 16044370 - 16044442
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  16044370 atctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 16044442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 37666663 - 37666735
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  37666663 atctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 37666735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 15372303 - 15372228
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||    
T  15372303 atctcgttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggactggagggag 15372228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 16243836 - 16243903
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  16243836 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggacc 16243903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 6648572 - 6648644
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||| ||||    
T  6648572 atctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggagg 6648644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 13344561 - 13344489
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||| ||||    
T  13344561 atctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaatagaaccggagg 13344489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 38917575 - 38917647
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||| ||||    
T  38917575 atctagttaaaaattcagtccaaatacattcacttttattgacctaaatttatcttataaataggaccggagg 38917647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 9047808 - 9047875
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||    
T  9047808 atctagttaaaaattcagtccaaatacattcactttttttgacctaaatttctcttataaatatgacc 9047875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 41492949 - 41493015
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggac 67  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  41492949 atctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttcttttataaataggac 41493015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 12170455 - 12170527
Alignment:
Q  4 tagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||| | |||||||    
T  12170455 tagttaaaaattcagtccaaatacattaacttttattgacctaattttctcttgtaaataggatcggagggag 12170527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 12337990 - 12338062
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||| ||| ||||    
T  12337990 atctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttttcttataaatagaaccggagg 12338062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 30099235 - 30099300
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaatagga 66  Q
    ||||| ||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||    
T  30099235 atctaattaaaaattcaatccaaatacattcatttttgttgacctaaatttctcttataaatagga 30099300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 31150730 - 31150665
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaatagga 66  Q
    ||||||||||||||| ||||||||||||| |||||||||||||  || ||||||||||||||||||    
T  31150730 atctagttaaaaatttagtccaaatacataaacttttgttgacgcaactttctcttataaatagga 31150665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 212
Target Start/End: Original strand, 10158134 - 10158181
Alignment:
Q  165 atgttaatgttctactccttcattgtgtcggattccatgcacgacaac 212  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  10158134 atgttaatgttctactccttctttgtgtcggattccatgcacgacaac 10158181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 41492950 - 41492898
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| |||||||    
T  41492950 atacatcaacttttgttgacccaaatttctcttataaataggaccggagggag 41492898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 16734855 - 16734802
Alignment:
Q  6 gttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttata 59  Q
    ||||||||||||||||| |||||| |||||||||||||| || |||||||||||    
T  16734855 gttaaaaattcagtccagatacatcaacttttgttgaccaaactttctcttata 16734802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 41453131 - 41453090
Alignment:
Q  6 gttaaaaattcagtccaaatacattaacttttgttgacctaa 47  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  41453131 gttaaaaattcagtccaaatacattaacttttattgacctaa 41453090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 44804631 - 44804680
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatt 50  Q
    |||||||||||||||||||||||||||||| | || ||||||||||||||    
T  44804631 atctagttaaaaattcagtccaaatacattcatttatgttgacctaaatt 44804680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 3055634 - 3055686
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  3055634 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 3055686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 6648573 - 6648521
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  6648573 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 6648521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 9047809 - 9047757
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  9047809 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 9047757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 94 - 161
Target Start/End: Original strand, 10157982 - 10158052
Alignment:
Q  94 ggcaatgctataaaacacccaccaacttttat---gtaggtgtattttaatattgaacaccattttgtttt 161  Q
    ||||||||||||||||| ||||| ||||||||   |||||||| |||||  ||||||||||||||||||||    
T  10157982 ggcaatgctataaaacatccacctacttttattatgtaggtgtgttttagcattgaacaccattttgtttt 10158052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 12337991 - 12337939
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  12337991 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 12337939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 13197764 - 13197712
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  13197764 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 13197712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 13724160 - 13724104
Alignment:
Q  20 ccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||||||| |||||||||||||||| || |||||| ||||||||||| |||||||    
T  13724160 ccaaatacatcaacttttgttgacctagatgtctcttgtaaataggaccggagggag 13724104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 15372302 - 15372354
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  15372302 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 15372354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 15896918 - 15896970
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  15896918 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 15896970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 37990067 - 37990015
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  37990067 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 37990015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 38917576 - 38917524
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  38917576 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 38917524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 41478693 - 41478641
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  41478693 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 41478641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 44398762 - 44398814
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  44398762 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 44398814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 23227344 - 23227391
Alignment:
Q  20 ccaaatacattaacttttgttgacctaaatttctcttataaataggac 67  Q
    |||||||||| |||||||||||||| |||| |||||||||||||||||    
T  23227344 ccaaatacatcaacttttgttgaccaaaatgtctcttataaataggac 23227391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 36688959 - 36688888
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagag 72  Q
    |||| ||| ||||||||| | | |||||| ||| |||||||||| || ||||||||||||||||||||||||    
T  36688959 atcttgtttaaaattcagacaagatacatcaacgtttgttgaccaaactttctcttataaataggaccagag 36688888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 10069283 - 10069332
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||| | ||||| |||||| ||||||||    
T  10069283 atacattaacttttgttgacctaaatatttcttaaaaatagtaccagagg 10069332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 4553069 - 4553125
Alignment:
Q  7 ttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaata 63  Q
    ||||||||||| |||||||||||  | ||||||||||| || |||||||||||||||    
T  4553069 ttaaaaattcaatccaaatacatctatttttgttgaccaaactttctcttataaata 4553125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 556 - 604
Target Start/End: Complemental strand, 7783542 - 7783494
Alignment:
Q  556 gccaatgtttggtttgacgttcaaccacttttattcgcgtttgacaact 604  Q
    |||| ||||||||||||||| |||||||||||||| |||||||| ||||    
T  7783542 gccagtgtttggtttgacgtccaaccacttttatttgcgtttgagaact 7783494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 13344560 - 13344612
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||| | ||| ||||||||||||||||||| |||||||    
T  13344560 atacatcaacttttgttgatccaaaattctcttataaataggaccggagggag 13344612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 16044371 - 16044319
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||| ||||||| ||| ||||||||||||||||||| |||||||    
T  16044371 atacatcaactttagttgacccaaaattctcttataaataggaccggagggag 16044319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 16243837 - 16243793
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||    
T  16243837 atacatcaacttttgttgacccaaaattctcttataaataggacc 16243793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 30099236 - 30099184
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| |||||| |||||||||||| |||||||    
T  30099236 atacatcaacttttgttgacccaaaattctctaataaataggaccggagggag 30099184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 36089497 - 36089457
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaatag 64  Q
    |||| ||||||||||||||||||||| ||||||||||||||    
T  36089497 atacgttaacttttgttgacctaaatatctcttataaatag 36089457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 37666664 - 37666612
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||| ||||||| ||| ||||||||||||||||||| |||||||    
T  37666664 atacatcaactttagttgacccaaaattctcttataaataggaccggagggag 37666612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 44397623 - 44397667
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||    
T  44397623 atacatcaacttttgttgacccaaaattctcttataaataggacc 44397667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 30852682 - 30852745
Alignment:
Q  13 attcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||||| | |||||| ||||||| || | |||| |||||||||||||||||||| |||||||    
T  30852682 attcagtctagatacataaacttttattaatctaactttctcttataaataggaccggagggag 30852745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 44804632 - 44804581
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagaggga 75  Q
    |||||| |||||||||| || |||| ||||||||||||||||||| ||||||    
T  44804632 atacatcaacttttgttaacttaaaattctcttataaataggaccggaggga 44804581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 45294395 - 45294438
Alignment:
Q  20 ccaaatacattaacttttgttgacctaaatttctcttataaata 63  Q
    |||||||| ||||||||||||||||||||||| ||||| |||||    
T  45294395 ccaaatactttaacttttgttgacctaaatttttcttaaaaata 45294438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 34 - 76
Target Start/End: Complemental strand, 23227316 - 23227274
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||||||||||||| | ||||||||||| ||||||||||||    
T  23227316 ttttgttgacctaaatatttcttataaatatgaccagagggag 23227274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 12170455 - 12170414
Alignment:
Q  22 aaatacattaacttttgttgacctaaatttctcttataaata 63  Q
    |||||||| |||||||||||||| || |||||||||||||||    
T  12170455 aaatacatcaacttttgttgacccaagtttctcttataaata 12170414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 23986830 - 23986785
Alignment:
Q  26 acattaacttttgttgacctaaatttctcttataaataggaccaga 71  Q
    |||||||||||| ||||  ||||||||||||||||||| |||||||    
T  23986830 acattaacttttattgatttaaatttctcttataaatatgaccaga 23986785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 40714014 - 40714067
Alignment:
Q  20 ccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||| |||||||||||||||| |  ||||||||||  |||||||||||    
T  40714014 ccaaatacatcaacttttgttgacctacaagtctcttataagaaggaccagagg 40714067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 20900718 - 20900670
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagag 72  Q
    |||||| |||||||| ||||| |||| |||||||||||||| |||||||    
T  20900718 atacatcaacttttgctgacccaaatgtctcttataaatagaaccagag 20900670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 1e-30; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 9268833 - 9268761
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  9268833 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccagagg 9268761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 1565782 - 1565854
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  1565782 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 1565854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 1738500 - 1738572
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  1738500 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 1738572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 7240826 - 7240754
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  7240826 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 7240754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 23314192 - 23314264
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  23314192 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 23314264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 31319452 - 31319524
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  31319452 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 31319524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 38063966 - 38064038
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  38063966 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 38064038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 46840937 - 46840865
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  46840937 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 46840865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 22285776 - 22285701
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  22285776 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggag 22285701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 36016249 - 36016324
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  36016249 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggag 36016324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 7482302 - 7482230
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  7482302 atctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 7482230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 28536804 - 28536876
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  28536804 atctagttaaaaattcattccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 28536876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 36583472 - 36583400
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  36583472 atctagttaaaaattaagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 36583400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 94371 - 94438
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  94371 atctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttctcttataaataggacc 94438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 38441537 - 38441465
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    ||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||| ||||    
T  38441537 atctagttaaaaattcagttcaaatacattcacttttgttgacataaatttctcttataaataggaccggagg 38441465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 9575486 - 9575411
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||||||||||||||||| |||||| |||||||||||||||| || ||||||||| ||||||||||||||||||    
T  9575486 atctagttaaaaattcagtctaaatacgttaacttttgttgacccaactttctcttacaaataggaccagagggag 9575411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 4790325 - 4790253
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    ||||||||||||||| |||||||||||||| | |||||||||||||||||| |||||||||||||||| ||||    
T  4790325 atctagttaaaaatttagtccaaatacattcatttttgttgacctaaatttttcttataaataggaccggagg 4790253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 33418453 - 33418392
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaat 62  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  33418453 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaaaaat 33418392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 38063967 - 38063915
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||||||    
T  38063967 atacatcaacttttgttgacccaaaattctcttataaataggaccagagggag 38063915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 40840175 - 40840239
Alignment:
Q  4 tagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    ||||||||||||||||||||||||||| | ||||||| || ||| |||||||| |||||||||||    
T  40840175 tagttaaaaattcagtccaaatacattgatttttgttaacttaactttctcttctaaataggacc 40840239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 29410616 - 29410557
Alignment:
Q  102 tataaaacacccaccaacttttatgtaggtgtattttaatattgaacaccattttgtttt 161  Q
    |||| |||||||||| |||||||||||||||| |||||  ||||||||||||||||||||    
T  29410616 tatataacacccacctacttttatgtaggtgtgttttagcattgaacaccattttgtttt 29410557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 1738501 - 1738449
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  1738501 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 1738449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 7240825 - 7240877
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  7240825 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 7240877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 7482301 - 7482353
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  7482301 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 7482353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 7661152 - 7661204
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| |||| |||| |||||||||||||||||||||    
T  7661152 atacatcaacttttgttgacccaaatgtctcatataaataggaccagagggag 7661204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 9268832 - 9268884
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  9268832 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 9268884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 22285775 - 22285827
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  22285775 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 22285827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 36016250 - 36016198
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||| ||||    
T  36016250 atacatcaacttttgttgacccaaaattctcttataaataggaccagatggag 36016198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 46840936 - 46840988
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  46840936 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 46840988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 23314186 - 23314141
Alignment:
Q  31 aacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  23314186 aacttttgttgacccaaaattctcttataaataggaccggagggag 23314141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 38441536 - 38441585
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| ||||    
T  38441536 atacatcaacttttgttgacccaaaattctcttataaataggaccggagg 38441585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 94372 - 94320
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||| | |||||||    
T  94372 atacatcaacttttgttgacccaaaattctcttataaataggatcggagggag 94320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 31319453 - 31319401
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||| ||| |||||||    
T  31319453 atacatcaacttttgttgacccaaaattctcttataaatagaaccggagggag 31319401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 33418452 - 33418496
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||    
T  33418452 atacatcaacttttgttgacccaaaattctcttataaataggacc 33418496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 36583471 - 36583523
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||| | |||||||    
T  36583471 atacatcaacttttgttgacccaaaattctcttataaataggatcggagggag 36583523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 46877666 - 46877710
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||    
T  46877666 atacattaacttttgttgacccaactttctcttatatataggacc 46877710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 7269458 - 7269533
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||| ||||||||||||||  | |||||| || ||||||||||| || ||| ||||||||||| |||| |||||||    
T  7269458 atctggttaaaaattcagtttagatacatcaatttttgttgacccaactttttcttataaataagaccggagggag 7269533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 63
Target Start/End: Complemental strand, 28469535 - 28469496
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaata 63  Q
    |||||||||||||||||||||||||| ||| |||||||||    
T  28469535 atacattaacttttgttgacctaaatgtcttttataaata 28469496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 63
Target Start/End: Complemental strand, 36033280 - 36033241
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaata 63  Q
    |||||| ||||||||||||||||||||| |||||||||||    
T  36033280 atacatcaacttttgttgacctaaatttatcttataaata 36033241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 40840172 - 40840129
Alignment:
Q  25 tacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    ||||| |||||||||||||  |||||||||||||||||||||||    
T  40840172 tacatcaacttttgttgacaaaaatttctcttataaataggacc 40840129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 4790324 - 4790373
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||| ||||||| |||||| ||| ||||||||||||||||||| ||||    
T  4790324 atacatcaacttttattgacccaaaattctcttataaataggaccggagg 4790373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 7661129 - 7661088
Alignment:
Q  25 tacattaacttttgttgacctaaatttctcttataaatagga 66  Q
    ||||| ||||||| ||||| ||||||||||||||||||||||    
T  7661129 tacatcaacttttattgacataaatttctcttataaatagga 7661088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 1565783 - 1565743
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaatag 64  Q
    |||||| |||||||||||||| ||| |||||||||||||||    
T  1565783 atacatcaacttttgttgacccaaaattctcttataaatag 1565743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 9575485 - 9575529
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    |||||| || ||||||||||| || ||||||||||||||||||||    
T  9575485 atacatcaagttttgttgaccaaactttctcttataaataggacc 9575529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 28536805 - 28536753
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| ||||||| |||| | ||| ||||||||||||||||||| |||||||    
T  28536805 atacatcaacttttattgatccaaaattctcttataaataggaccggagggag 28536753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 1e-30; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 23360019 - 23359947
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23360019 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccagagg 23359947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 9395427 - 9395355
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  9395427 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 9395355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 37149008 - 37149080
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  37149008 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 37149080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 26350403 - 26350478
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||    
T  26350403 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggagggag 26350478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 11795245 - 11795180
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaatagga 66  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  11795245 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagga 11795180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 36563591 - 36563656
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaatagga 66  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  36563591 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagga 36563656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 583066 - 582994
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||    
T  583066 atctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaataggaccggagg 582994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 13033128 - 13033056
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  13033128 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 13033056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 13103101 - 13103029
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  13103101 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 13103029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 20848151 - 20848079
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||    
T  20848151 atctagttaaaaattcagtccaaatacattcacttttattgacctaaatttctcttataaataggaccggagg 20848079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 41989460 - 41989532
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||    
T  41989460 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaataggaccggagg 41989532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 4444037 - 4443970
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    ||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  4444037 atctatttaaaaattcagtctaaatacattcacttttgttgacctaaatttctcttataaataggacc 4443970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 17025701 - 17025629
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||  ||||||||| |||||||| |||||||||||||||||||||||||||| ||||    
T  17025701 atctagttaaaaattcagtttaaatacattcacttttgtggacctaaatttctcttataaataggaccggagg 17025629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 37642031 - 37641958
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttg-ttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||| ||||||| ||||||  |||||||||||||||||||||||||||||| ||||    
T  37642031 atctagttaaaaattcagtccacatacattcactttttattgacctaaatttctcttataaataggaccggagg 37641958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 38361744 - 38361809
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaatagga 66  Q
    ||||| |||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||    
T  38361744 atctatttaaaaattcagtccaaatacattcacttttattgacctaaatttatcttataaatagga 38361809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21576023 - 21575970
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctc 54  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  21576023 atctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 21575970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 6126901 - 6126845
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctctta 57  Q
    ||||||||||||||| |||||||||||||| | ||||||||| ||||||||||||||    
T  6126901 atctagttaaaaatttagtccaaatacattcatttttgttgatctaaatttctctta 6126845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 13539920 - 13539983
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    |||||||||||||||||||| ||||  |||    ||||||||||||||||||||||||||||||||||    
T  13539920 atctagttaaaaattcagtctaaatttatt----tttgttgacctaaatttctcttataaataggacc 13539983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 6126900 - 6126952
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  6126900 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 6126952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 9395426 - 9395478
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  9395426 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 9395478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 13103100 - 13103152
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  13103100 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 13103152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 17025700 - 17025752
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  17025700 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 17025752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 36563592 - 36563540
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  36563592 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 36563540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 41989461 - 41989409
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  41989461 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 41989409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 23360018 - 23360067
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| ||||    
T  23360018 atacatcaacttttgttgacccaaaattctcttataaataggaccggagg 23360067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 2366396 - 2366352
Alignment:
Q  20 ccaaatacattaacttttgttgacctaaatttctcttataaatag 64  Q
    |||||||||| |||| ||||||||| |||||||||||||||||||    
T  2366396 ccaaatacatgaactcttgttgacccaaatttctcttataaatag 2366352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 3549605 - 3549673
Alignment:
Q  6 gttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagaggg 74  Q
    |||||||||| || ||| ||||||||| ||||||||||  |||| |||||||||||||| |||| ||||    
T  3549605 gttaaaaatttagaccagatacattaatttttgttgactaaaatatctcttataaatagaaccaaaggg 3549673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 11795244 - 11795296
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||  |||||||    
T  11795244 atacatcaacttttgttgacccaaaattctcttataaataggactggagggag 11795296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 13033127 - 13033179
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||| | |||||||    
T  13033127 atacatcaacttttgttgacccaaaattctcttataaataggatcggagggag 13033179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 21576022 - 21576074
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||| | ||| ||||||||||||||||||| |||||||    
T  21576022 atacatcaacttttgttgatccaaaattctcttataaataggaccggagggag 21576074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 27081014 - 27081058
Alignment:
Q  22 aaatacattaacttttgttgacctaaatttctcttataaatagga 66  Q
    |||||||| ||||||||||||||||||| |||||| |||||||||    
T  27081014 aaatacatcaacttttgttgacctaaatgtctcttgtaaatagga 27081058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 37149009 - 37148957
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| |||| |||||||||||||| |||||||    
T  37149009 atacatcaacttttgttgacccaaaattctattataaataggaccggagggag 37148957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 37642030 - 37642082
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| ||||||| |||||| ||| ||||||||||||||||||| |||||||    
T  37642030 atacatcaacttttattgacccaaaattctcttataaataggaccggagggag 37642082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 4444036 - 4444087
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagaggga 75  Q
    |||||| |||||||||||| ||||| |||||||||||||| |||| ||||||    
T  4444036 atacatcaacttttgttgatctaaaattctcttataaataagaccggaggga 4444087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 9006936 - 9006885
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagaggga 75  Q
    |||||| ||||||||||||||||||  ||| |||||||||||| ||||||||    
T  9006936 atacatcaacttttgttgacctaaaagtctgttataaataggagcagaggga 9006885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 39290851 - 39290777
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    ||||| ||||||||| | ||||||||||| || |||||||||||| |  ||||||||| ||||||||| |||||||    
T  39290851 atctaattaaaaatttaatccaaatacatcaatttttgttgacctgatattctcttat-aataggaccggagggag 39290777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 11574166 - 11574200
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggacc 68  Q
    |||||||||||||||| ||||||||||||||||||    
T  11574166 ttttgttgacctaaatgtctcttataaataggacc 11574200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 2629620 - 2629657
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaa 61  Q
    |||||||||||||||||||||||||| | |||||||||    
T  2629620 atacattaacttttgttgacctaaatatttcttataaa 2629657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 3549602 - 3549557
Alignment:
Q  23 aatacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    ||||||| |||||||||| |  ||||||||||||||||||||||||    
T  3549602 aatacatcaacttttgttaatataaatttctcttataaataggacc 3549557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 9188548 - 9188495
Alignment:
Q  20 ccaaatacattaactttt-gttgacctaaatttctcttataaataggaccagag 72  Q
    |||||||||||||||||| ||||||  |||| |||||||||||||||| |||||    
T  9188548 ccaaatacattaactttttgttgactcaaatatctcttataaataggatcagag 9188495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 13284695 - 13284756
Alignment:
Q  7 ttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    ||||||||| || |||||||||| |||||||| |  ||||||| ||| ||||||||||||||    
T  13284695 ttaaaaatttagaccaaatacataaacttttgatagcctaaatatctattataaataggacc 13284756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 35904473 - 35904440
Alignment:
Q  4 tagttaaaaattcagtccaaatacattaactttt 37  Q
    |||||||||||||||||||||||||| |||||||    
T  35904473 tagttaaaaattcagtccaaatacatcaactttt 35904440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 36595828 - 36595784
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    |||||| || |||||||||||||| ||||||||||||||| ||||    
T  36595828 atacatcaatttttgttgacctaactttctcttataaataagacc 36595784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 5e-30; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 31654690 - 31654615
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  31654690 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggag 31654615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 54665 - 54737
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  54665 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 54737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 2890215 - 2890287
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  2890215 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 2890287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 3304331 - 3304403
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  3304331 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 3304403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 6552732 - 6552660
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  6552732 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 6552660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 7785831 - 7785903
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  7785831 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 7785903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 7805752 - 7805824
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  7805752 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 7805824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 12343193 - 12343265
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  12343193 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 12343265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 32114528 - 32114600
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  32114528 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 32114600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 43199407 - 43199479
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  43199407 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 43199479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 44498240 - 44498312
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  44498240 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 44498312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 25601053 - 25601118
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaatagga 66  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  25601053 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagga 25601118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 12763707 - 12763779
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||    
T  12763707 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggagg 12763779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 15888405 - 15888477
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  15888405 atctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 15888477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 32211416 - 32211488
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||    
T  32211416 atctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggagg 32211488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 39571256 - 39571328
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||    
T  39571256 atctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggagg 39571328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 7012248 - 7012176
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||    
T  7012248 atctagttaaaaattcagtccaaatatattcacttttgttgatctaaatttctcttataaataggaccggagg 7012176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 33289314 - 33289386
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||| ||||    
T  33289314 atctagttaaaaattcagtccaaatacattcacttatgttgatctaaatttctcttataaataggaccggagg 33289386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 8587247 - 8587172
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    ||||||||||||||| |||| |||||||| |||||||||||||| || |||||||||||||||||||| |||||||    
T  8587247 atctagttaaaaatttagtcaaaatacatcaacttttgttgaccaaactttctcttataaataggaccggagggag 8587172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 13578934 - 13578871
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaatag 64  Q
    ||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||    
T  13578934 atctagttaaaaattcagttcaaatacattcacttttattgacctaaatttctcttataaatag 13578871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 4245649 - 4245706
Alignment:
Q  16 cagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  4245649 cagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 4245706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 28463688 - 28463616
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||| ||| |||||||||||||||||||| |||||||||||||| || |||||||||||||||||||| ||||    
T  28463688 atctggttcaaaattcagtccaaatacatcaacttttgttgacccaactttctcttataaataggaccggagg 28463616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 25601054 - 25601002
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||| |||||||    
T  25601054 atacattaacttttgttgacccaaaattctcttataaataggaccggagggag 25601002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 54666 - 54614
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  54666 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 54614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 2890216 - 2890164
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  2890216 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 2890164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 6552731 - 6552783
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  6552731 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 6552783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 7785832 - 7785780
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  7785832 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 7785780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 17006982 - 17006914
Alignment:
Q  7 ttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagaggga 75  Q
    |||| ||||||||||| || ||| |||||||||||||| || |||||||||||||||||| | ||||||    
T  17006982 ttaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaataggatcggaggga 17006914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 17570265 - 17570333
Alignment:
Q  7 ttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagaggga 75  Q
    |||| ||||||||||| || ||| |||||||||||||| || |||||||||||||||||| | ||||||    
T  17570265 ttaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaataggatcggaggga 17570333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 24692040 - 24692096
Alignment:
Q  10 aaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaatagga 66  Q
    |||||||||| || |||||| ||||||||||||||||| ||| ||||||||||||||    
T  24692040 aaaattcagttcagatacatcaacttttgttgacctaactttttcttataaatagga 24692096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 33289315 - 33289263
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  33289315 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 33289263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 39571257 - 39571205
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  39571257 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 39571205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 43199408 - 43199356
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  43199408 atacatcaacttttgttgaccaaaaattctcttataaataggaccggagggag 43199356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 3304332 - 3304280
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| || |||||||||||||||| |||||||    
T  3304332 atacatcaacttttgttgacccaaaattttcttataaataggaccggagggag 3304280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 7805753 - 7805701
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||| ||||| ||| ||||||||||||||||||| |||||||    
T  7805753 atacatcaacttttgctgacccaaaattctcttataaataggaccggagggag 7805701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 12343194 - 12343150
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||    
T  12343194 atacatcaacttttgttgaccaaaaattctcttataaataggacc 12343150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 12763708 - 12763656
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| || |||||||||||||||| |||||||    
T  12763708 atacatcaacttttgttgacccaaaattatcttataaataggaccggagggag 12763656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 27422266 - 27422310
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    ||||||| | ||||||||||| |||||||||||||||||||||||    
T  27422266 atacattcatttttgttgacccaaatttctcttataaataggacc 27422310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 32211417 - 32211365
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| || ||||||||||| ||| ||||||||||||||||||| |||||||    
T  32211417 atacatcaatttttgttgacccaaaattctcttataaataggaccggagggag 32211365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 44498241 - 44498189
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| ||||||| |||||| ||| ||||||||||||||||||| |||||||    
T  44498241 atacatcaacttttattgacccaaaattctcttataaataggaccggagggag 44498189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 28999104 - 28999163
Alignment:
Q  4 tagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaata 63  Q
    ||||||||||||||||| | |||||| || ||||||||||| || ||||| |||||||||    
T  28999104 tagttaaaaattcagtctagatacatcaatttttgttgaccaaactttcttttataaata 28999163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 27422267 - 27422198
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||| |||||||||||||||||||||||| ||   ||||||||  || ||| |||||||||||||||| ||||    
T  27422267 atctggttaaaaattcagtccaaatacatgaa---ttgttgactcaactttatcttataaataggaccggagg 27422198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 7012247 - 7012296
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||| |||||||||||| | ||| ||||||||||||||||||| ||||    
T  7012247 atacatcaacttttgttgatccaaaattctcttataaataggaccggagg 7012296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 13246851 - 13246806
Alignment:
Q  21 caaatacattaacttttgttgacctaaatttctcttataaatagga 66  Q
    |||||||||| | ||||||||| | |||||||||||||||||||||    
T  13246851 caaatacattcatttttgttgatccaaatttctcttataaatagga 13246806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 31654689 - 31654738
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||| |||||||||||||| ||| |||| |||||||||||||| ||||    
T  31654689 atacatcaacttttgttgacccaaaattcttttataaataggaccggagg 31654738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 556 - 608
Target Start/End: Complemental strand, 14372984 - 14372932
Alignment:
Q  556 gccaatgtttggtttgacgttcaaccacttttattcgcgtttgacaactcttc 608  Q
    |||| ||||||||||| ||| |||||||||||| ||| |||||| ||||||||    
T  14372984 gccagtgtttggtttggcgtccaaccacttttactcgtgtttgagaactcttc 14372932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 15688084 - 15688040
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    |||||| |||||||||||||| || ||||||||||||| ||||||    
T  15688084 atacatcaacttttgttgacccaactttctcttataaacaggacc 15688040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 15888406 - 15888366
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaatag 64  Q
    |||||| |||||||||||||| ||| |||||||||||||||    
T  15888406 atacatcaacttttgttgacccaaaattctcttataaatag 15888366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 30171540 - 30171484
Alignment:
Q  20 ccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||| |||||||||||||||||||  ||| ||||||| ||||||||| | |||||||    
T  30171540 ccaagtacattaacttttgttgactcaaaattctcttgtaaataggatcggagggag 30171484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 32114529 - 32114477
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| || ||||||||||| ||| || |||||||||||||||| |||||||    
T  32114529 atacatcaatttttgttgacccaaaattttcttataaataggaccggagggag 32114477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 5e-30; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 43900626 - 43900551
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  43900626 atctagttaaaaattcagtccaaatacatttacttttgttgacctaaatttctcttataaataggaccggagggag 43900551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 3372198 - 3372126
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  3372198 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 3372126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 20538739 - 20538811
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  20538739 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 20538811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 24704447 - 24704375
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  24704447 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 24704375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 47833688 - 47833616
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  47833688 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 47833616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 48336340 - 48336268
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  48336340 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 48336268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 53337447 - 53337375
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  53337447 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 53337375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 3993053 - 3992981
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||    
T  3993053 atctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttctcttataaataggaccggagg 3992981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 6121946 - 6122018
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||    
T  6121946 atctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggagg 6122018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 26231654 - 26231582
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||    
T  26231654 atctagttaaaaattcagtccaaatacattcgcttttgttgacctaaatttctcttataaataggaccggagg 26231582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 33551278 - 33551206
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  33551278 atctagttaaaaattcagtcaaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 33551206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 42797809 - 42797737
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||    
T  42797809 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttatatataggaccggagg 42797737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 46797802 - 46797730
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||    
T  46797802 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagaaccggagg 46797730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 33621873 - 33621810
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaatag 64  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  33621873 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatag 33621810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 40913246 - 40913317
Alignment:
Q  5 agttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||    
T  40913246 agttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggagggag 40913317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 52756752 - 52756685
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  52756752 atctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaataggacc 52756685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 3904739 - 3904808
Alignment:
Q  4 tagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||    
T  3904739 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttcttttataaataggaccggagg 3904808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 47838670 - 47838735
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaatagga 66  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  47838670 atctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttctcttataaatagga 47838735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 7579387 - 7579315
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    ||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||    
T  7579387 atctagttaaaaattcaatccaaatacattcacttttgttaacctaaatttctcttataaataggaccggagg 7579315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 41469819 - 41469886
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  41469819 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttcttttataaataggacc 41469886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 41615732 - 41615799
Alignment:
Q  4 tagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccaga 71  Q
    |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  41615732 tagttaaaaattaagtccaaatacattaacttttgttgacctaattttctcttataaataggatcaga 41615799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 5986950 - 5986890
Alignment:
Q  4 tagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaatag 64  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  5986950 tagttaaaaattcagtccaaatacattcacttttgttgacctatatttctcttataaatag 5986890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 51894635 - 51894707
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||| ||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||| ||||    
T  51894635 atctggttaaaaattcagtccaaaaacattcacttttgttgacctaaatttttcttataaataggaccggagg 51894707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 25855155 - 25855085
Alignment:
Q  6 gttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    ||||||||||||||||||||||||||||||||||||||  || ||||||| |||||||||||| |||||||    
T  25855155 gttaaaaattcagtccaaatacattaacttttgttgactcaactttctctcataaataggacctgagggag 25855085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 3422137 - 3422073
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaatagga 66  Q
    ||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||    
T  3422137 atctagttaaaaattcagttcaaatacattca-ttttgttgacctaaatttctcttataaatagga 3422073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 29845719 - 29845656
Alignment:
Q  4 tagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggac 67  Q
    |||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||| ||||||    
T  29845719 tagttaaaaattcagttcaaatatattaatttttgttgacctaaatttctcttataagtaggac 29845656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 4780371 - 4780423
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  4780371 atacattaacttttgttgaccaaaatttctcttataaataggaccggagggag 4780423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 42797808 - 42797860
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| |||||||    
T  42797808 atacatcaacttttgttgacctaaaattctcttataaataggaccggagggag 42797860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 17236845 - 17236908
Alignment:
Q  6 gttaaaaattcagtccaaa-tacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    ||||||||||||||| ||| ||||| |||||||||||||| |||||| ||||||||||||||||    
T  17236845 gttaaaaattcagtctaaaatacatcaacttttgttgacccaaatttttcttataaataggacc 17236908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 50430471 - 50430533
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaata 63  Q
    |||| |||||||||||| ||||||||||| |||||||||||||| || || ||||||||||||    
T  50430471 atctggttaaaaattcaatccaaatacatcaacttttgttgacccaacttgctcttataaata 50430533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 3422136 - 3422188
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  3422136 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 3422188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 6121947 - 6121895
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  6121947 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 6121895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 24704446 - 24704498
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    ||||||||||||||||||||| ||| ||||||||||||||||| | |||||||    
T  24704446 atacattaacttttgttgacccaaaattctcttataaataggatcggagggag 24704498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 41469820 - 41469768
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  41469820 atacatcaacttttgttgaccaaaaattctcttataaataggaccggagggag 41469768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 47833687 - 47833739
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  47833687 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 47833739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 47838671 - 47838619
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  47838671 atacatcaacttttgttgaccaaaaattctcttataaataggaccggagggag 47838619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 51894636 - 51894584
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  51894636 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 51894584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 76
Target Start/End: Complemental strand, 3904739 - 3904685
Alignment:
Q  22 aaatacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||||| || ||||||||||| ||| ||||||||||||||||||| |||||||    
T  3904739 aaatacatcaatttttgttgacccaaaattctcttataaataggaccggagggag 3904685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 5986950 - 5986996
Alignment:
Q  22 aaatacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    |||||||| |||||||||||||| ||| |||||||||||||||||||    
T  5986950 aaatacatcaacttttgttgacccaaaattctcttataaataggacc 5986996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 6924746 - 6924802
Alignment:
Q  10 aaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggac 67  Q
    |||||| || |||||||||||||||||||||||||||| ||| ||||||| |||||||    
T  6924746 aaaatttagaccaaatacattaacttttgttgacctaacttt-tcttatatataggac 6924802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 17344284 - 17344227
Alignment:
Q  7 ttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaatag 64  Q
    ||||||||||||| || |||||| ||||||||||||  ||| ||||||||||||||||    
T  17344284 ttaaaaattcagttcagatacatcaacttttgttgatttaactttctcttataaatag 17344227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 40913236 - 40913191
Alignment:
Q  31 aacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||||||||| | ||||||||||||||||||||||| |||||||    
T  40913236 aacttttgttgatccaaatttctcttataaataggaccggagggag 40913191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 31 - 76
Target Start/End: Original strand, 46797808 - 46797853
Alignment:
Q  31 aacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  46797808 aacttttgttgacccaaaattctcttataaataggaccggagggag 46797853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 3372197 - 3372249
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| || |||||||||||||||| |||||||    
T  3372197 atacatcaacttttgttgacccaaaattatcttataaataggaccggagggag 3372249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 3993052 - 3993104
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| |||||||||||||| |||| |||||||    
T  3993052 atacatcaacttttgttgacccaaaattctcttataaataagaccggagggag 3993104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 20538740 - 20538688
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| || ||||||||||| ||| ||||||||||||||||||| |||||||    
T  20538740 atacatcaaattttgttgacccaaaattctcttataaataggaccggagggag 20538688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 33621872 - 33621924
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| || |||||||||||||||| |||||||    
T  33621872 atacatcaacttttgttgacccaaaattatcttataaataggaccggagggag 33621924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 48336339 - 48336391
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| || |||||||||||||||| |||||||    
T  48336339 atacatcaacttttgttgacccaaaattttcttataaataggaccggagggag 48336391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 53337446 - 53337498
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| ||||||| |||||| ||| ||||||||||||||||||| |||||||    
T  53337446 atacatcaacttttattgacccaaaattctcttataaataggaccggagggag 53337498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 41615732 - 41615686
Alignment:
Q  22 aaatacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    |||||||| |||||||||||| | || ||||||||||||||||||||    
T  41615732 aaatacatcaacttttgttgatccaattttctcttataaataggacc 41615686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 45725930 - 45725976
Alignment:
Q  22 aaatacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    |||||| |||||||||||||||  || ||||||||||||||||||||    
T  45725930 aaatacgttaacttttgttgacgaaactttctcttataaataggacc 45725976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 72
Target Start/End: Original strand, 1716382 - 1716423
Alignment:
Q  31 aacttttgttgacctaaatttctcttataaataggaccagag 72  Q
    |||||| ||||||||||| ||||||||||||||||| |||||    
T  1716382 aactttggttgacctaaacttctcttataaataggatcagag 1716423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 7579386 - 7579435
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||| |||||||||||||| ||| ||||||||||||||| ||| ||||    
T  7579386 atacatcaacttttgttgacccaaaattctcttataaatagaaccggagg 7579435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 43900625 - 43900674
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||| |||||||||| ||| ||| ||||||||||||||||||| ||||    
T  43900625 atacatcaacttttgttaacccaaaattctcttataaataggaccggagg 43900674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 44900127 - 44900082
Alignment:
Q  31 aacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    ||||||||||||||  ||| |||||||||||||||||| |||||||    
T  44900127 aacttttgttgaccagaatatctcttataaataggaccggagggag 44900082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 1716355 - 1716303
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| || | ||||||||||||| |||| |||||||    
T  1716355 atacatcaacttttgttgaccaaattatctcttataaataagaccggagggag 1716303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 9876693 - 9876653
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaatag 64  Q
    ||||||||| ||||||| || ||||||||||||||||||||    
T  9876693 atacattaaattttgttaacgtaaatttctcttataaatag 9876653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 52756751 - 52756795
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    |||||| |||||||||||||| ||| |||| ||||||||||||||    
T  52756751 atacatcaacttttgttgacccaaaattcttttataaataggacc 52756795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 5e-30; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 17653789 - 17653714
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  17653789 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggag 17653714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 37508998 - 37508923
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  37508998 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggag 37508923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 4238671 - 4238599
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  4238671 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 4238599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 10298056 - 10297984
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  10298056 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 10297984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 19557105 - 19557177
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  19557105 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 19557177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 22722008 - 22721936
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  22722008 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 22721936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 44785449 - 44785521
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  44785449 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 44785521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 49823434 - 49823506
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  49823434 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 49823506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 2787885 - 2787952
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2787885 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggacc 2787952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 8817439 - 8817506
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8817439 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggacc 8817506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 35513550 - 35513483
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  35513550 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggacc 35513483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 36095733 - 36095808
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||    
T  36095733 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttatcttataaataggaccggagggag 36095808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 46208107 - 46208032
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  46208107 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggag 46208032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 8437502 - 8437430
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||    
T  8437502 atctagttaaaaattcagtccaaatacattcacttttattgacctaaatttctcttataaataggaccggagg 8437430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 21295379 - 21295451
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  21295379 atctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 21295451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 34080083 - 34080155
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  34080083 atcttgttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 34080155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 38964469 - 38964397
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||    
T  38964469 atctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggagg 38964397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 48340474 - 48340402
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||    
T  48340474 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttgtaaataggaccggagg 48340402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 51406750 - 51406678
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||    
T  51406750 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggagg 51406678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 9111547 - 9111614
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  9111547 atctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggacc 9111614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 40691049 - 40691116
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  40691049 atctagttaaaaattcagtccaaatacattcacttttgttaacctaaatttctcttataaataggacc 40691116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 6013389 - 6013455
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggac 67  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  6013389 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaattggac 6013455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 33942985 - 33943050
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaatagga 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  33942985 atctagttaaaaattcagtccaaatacattaacttttgttgacctaactttcttttataaatagga 33943050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 42507408 - 42507480
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||    
T  42507408 atctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttctattataaataggaccggagg 42507480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 42170399 - 42170471
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||| ||||    
T  42170399 atctggttaaaaattcactccaaatacattcacttttgttgacctaaatttctcttataaataagaccggagg 42170471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 21295380 - 21295328
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| |||||||    
T  21295380 atacatcaacttttgttgacctaaaattctcttataaataggaccggagggag 21295328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 33128261 - 33128217
Alignment:
Q  23 aatacattaacttttgttgacctaaatttctcttataaataggac 67  Q
    |||||||||||||||||||||||||||||||||||||| ||||||    
T  33128261 aatacattaacttttgttgacctaaatttctcttataattaggac 33128217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 46208106 - 46208158
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| |||||||    
T  46208106 atacatcaacttttgttgacctaaaattctcttataaataggaccggagggag 46208158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 8951954 - 8952018
Alignment:
Q  6 gttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccag 70  Q
    |||||||||||||||||||||||||||||||||| ||   || ||||||||||||| | ||||||    
T  8951954 gttaaaaattcagtccaaatacattaacttttgtcgattcaactttctcttataaacaagaccag 8952018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 9213588 - 9213644
Alignment:
Q  20 ccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||||||| || |||||||||||||||||||||| |||||||||||  |||||||    
T  9213588 ccaaatacatcaatttttgttgacctaaatttctctaataaataggacgggagggag 9213644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 10298055 - 10298107
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  10298055 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 10298107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 19557106 - 19557054
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  19557106 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 19557054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 26001141 - 26001185
Alignment:
Q  25 tacattaacttttgttgacctaaatttctcttataaataggacca 69  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||    
T  26001141 tacattaacttttgttgacttaaatttctcttataaatatgacca 26001185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 34080084 - 34080032
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  34080084 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 34080032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 38964468 - 38964520
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  38964468 atacatcaacttttgttgaccaaaaattctcttataaataggaccggagggag 38964520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 40691050 - 40690998
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  40691050 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 40690998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 42170400 - 42170348
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||| ||||    
T  42170400 atacatcaacttttgttgacccaaaattctcttataaataggaccagatggag 42170348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 43323132 - 43323072
Alignment:
Q  6 gttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaatagga 66  Q
    |||||||||| | ||||||||||| |||||||||||||| || ||| ||||||||||||||    
T  43323132 gttaaaaatttaatccaaatacatcaacttttgttgacccaattttttcttataaatagga 43323072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 48340473 - 48340525
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  48340473 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 48340525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 49823435 - 49823383
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  49823435 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 49823383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 9111548 - 9111497
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagaggga 75  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| ||||||    
T  9111548 atacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 9111497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 42507409 - 42507358
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagaggga 75  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| ||||||    
T  42507409 atacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 42507358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 4238670 - 4238719
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| ||||    
T  4238670 atacatcaacttttgttgaccaaaaattctcttataaataggaccggagg 4238719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 17653788 - 17653837
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| ||||    
T  17653788 atacatcaacttttgttgacccaaaattctcttataaataggaccggagg 17653837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 37508997 - 37509046
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| ||||    
T  37508997 atacatcaacttttgttgacccaaaattctcttataaataggaccggagg 37509046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 2787886 - 2787834
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||| ||||| ||| ||||||||||||||||||| |||||||    
T  2787886 atacatcaacttttgctgacccaaaattctcttataaataggaccggagggag 2787834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 6013382 - 6013338
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    ||||||||||||| ||| ||||||||||||||||||| |||||||    
T  6013382 acttttgttgacccaaaattctcttataaataggaccggagggag 6013338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 8437501 - 8437553
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||  ||| ||||||||||||||||||| |||||||    
T  8437501 atacatcaacttttgttgactcaaaattctcttataaataggaccggagggag 8437553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 8817440 - 8817396
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||    
T  8817440 atacatcaacttttgttgacccaaaattctcttataaataggacc 8817396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 9027196 - 9027144
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| || ||| |||||||||||||||| |||||||    
T  9027196 atacatcaacttttgttgacccaactttatcttataaataggaccggagggag 9027144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 22722007 - 22722051
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||    
T  22722007 atacatcaacttttgttgacccaaaattctcttataaataggacc 22722051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 51406749 - 51406801
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| || ||||||||||| ||| ||||||||||||||||||| |||||||    
T  51406749 atacatcaatttttgttgacccaaaattctcttataaataggaccggagggag 51406801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 9213577 - 9213518
Alignment:
Q  17 agtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||| |||||||||||||  |||| ||| |||||||||||||| |||||||    
T  9213577 agtccagatacatcaacttttgttgactaaaatgtcttttataaataggaccggagggag 9213518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 1262279 - 1262321
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaatagga 66  Q
    |||||||||||||||||||| ||||| |||||| |||||||||    
T  1262279 atacattaacttttgttgacgtaaatgtctcttctaaatagga 1262321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 2131734 - 2131800
Alignment:
Q  10 aaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| || ||| |||||| |||||||||||||| |||| ||||| |||| ||||||| |||||||    
T  2131734 aaaatttagaccagatacatcaacttttgttgacccaaatgtctctcataagtaggaccggagggag 2131800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 33942986 - 33942944
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaatagga 66  Q
    |||||| |||||||||||||| || ||||||||||||||||||    
T  33942986 atacatcaacttttgttgacccaagtttctcttataaatagga 33942944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 44785450 - 44785401
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||| |||||||||||||| ||| ||||||||||||||| ||| ||||    
T  44785450 atacatcaacttttgttgacccaaaattctcttataaatagaaccggagg 44785401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 5323279 - 5323323
Alignment:
Q  20 ccaaatacattaacttttgttgacctaaatttctcttataaatag 64  Q
    |||||||||| |||||||||||||| ||||||  |||||||||||    
T  5323279 ccaaatacatcaacttttgttgacccaaattttacttataaatag 5323323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 65; Significance: 3e-28; HSPs: 2)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 12937 - 12865
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  12937 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 12865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 12936 - 12988
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||| ||||| ||| ||||||||||||||||||| |||||||    
T  12936 atacatcaacttttgctgacccaaaattctcttataaataggaccggagggag 12988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 65; Significance: 3e-28; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 23862 - 23790
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  23862 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 23790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 23861 - 23913
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| || |||||||||||||||| |||||||    
T  23861 atacatcaacttttgttgacccaaaattttcttataaataggaccggagggag 23913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 3e-28; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 2830412 - 2830340
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  2830412 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 2830340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 6330192 - 6330120
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  6330192 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 6330120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 8383022 - 8383094
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  8383022 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 8383094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 11572198 - 11572270
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  11572198 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 11572270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 26602400 - 26602328
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  26602400 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 26602328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 33052847 - 33052919
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  33052847 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 33052919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 8417846 - 8417921
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  8417846 atctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataagaccagagggag 8417921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 13853646 - 13853713
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13853646 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggacc 13853713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 8099607 - 8099535
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  8099607 atctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 8099535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 35031054 - 35031126
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||    
T  35031054 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccggagg 35031126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 6143631 - 6143566
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaatagga 66  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  6143631 atctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaatagga 6143566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 9644773 - 9644701
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||| ||||    
T  9644773 atctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggagg 9644701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 9650790 - 9650718
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||| ||||    
T  9650790 atctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggagg 9650718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 6068643 - 6068571
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    ||||||||||||||||| |||||||||||| |||||| ||||||||||||| |||||||||||||||| ||||    
T  6068643 atctagttaaaaattcaatccaaatacattcacttttattgacctaaatttttcttataaataggaccggagg 6068571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 28747187 - 28747248
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaat 62  Q
    ||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  28747187 atctaattaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaat 28747248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 13043835 - 13043763
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    ||||||||||||||||| | |||||||||| | ||||||||||||||||||||||||||||||| ||| ||||    
T  13043835 atctagttaaaaattcaattcaaatacattcatttttgttgacctaaatttctcttataaatagaaccggagg 13043763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 6068997 - 6069060
Alignment:
Q  5 agttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    ||||||||||| || |||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  6068997 agttaaaaatttagaccaaatacattaacttttgttgacctaaatatcttttataaataggacc 6069060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 14936510 - 14936584
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagaggga 75  Q
    |||||||||| ||||   ||||||||||| |||| ||||||||| |||| |||||||||||||||||||||||||    
T  14936510 atctagttaagaatttgttccaaatacatcaactattgttgacccaaatatctcttataaataggaccagaggga 14936584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 3788111 - 3788165
Alignment:
Q  22 aaatacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||||| ||||||||||||||||||||| ||||||||||| |||| |||||||    
T  3788111 aaatacatcaacttttgttgacctaaatttatcttataaataagaccggagggag 3788165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 6549940 - 6549902
Alignment:
Q  21 caaatacattaacttttgttgacctaaatttctcttata 59  Q
    |||||||||||||||||||||||||||||||||||||||    
T  6549940 caaatacattaacttttgttgacctaaatttctcttata 6549902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 2830411 - 2830463
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  2830411 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 2830463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 6330191 - 6330243
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  6330191 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 6330243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 8099606 - 8099658
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  8099606 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 8099658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 8383023 - 8382971
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  8383023 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 8382971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 9644772 - 9644824
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  9644772 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 9644824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 9650789 - 9650841
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  9650789 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 9650841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 11572199 - 11572147
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  11572199 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 11572147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 13853647 - 13853595
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  13853647 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 13853595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 26602399 - 26602451
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  26602399 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 26602451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 17992065 - 17992018
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaa 48  Q
    ||||||||||||||||| |||||||||||| |||||| ||||||||||    
T  17992065 atctagttaaaaattcaatccaaatacattcacttttattgacctaaa 17992018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 22896539 - 22896473
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||||||||||||||||||||||||         |||||||||||| ||||||||||||||||||| |||||||    
T  22896539 atctagttaaaaattcagtccaaatac---------tgttgacctaaacttctcttataaataggaccggagggag 22896473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 6068642 - 6068694
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||  ||| ||||||||||||||||||| |||||||    
T  6068642 atacatcaacttttgttgactcaaaattctcttataaataggaccggagggag 6068694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 8417847 - 8417803
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||    
T  8417847 atacatcaacttttgttgacccaaaattctcttataaataggacc 8417803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 28747188 - 28747145
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggac 67  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||    
T  28747188 atacatcaacttttgttgacccaaaattctcttataaataggac 28747145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 12473684 - 12473651
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggac 67  Q
    |||| |||||||||||||||||||||||||||||    
T  12473684 ttttattgacctaaatttctcttataaataggac 12473651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 35031055 - 35031006
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||| || ||||||||||| ||| ||||||||||||||||||| ||||    
T  35031055 atacatcaatttttgttgacccaaaattctcttataaataggaccggagg 35031006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 8186443 - 8186487
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    |||||| |||||||||||| | |||||||| ||||||||||||||    
T  8186443 atacatcaacttttgttgatccaaatttcttttataaataggacc 8186487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 14936511 - 14936459
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| | ||||||||||||||||| | |||| || ||||||||||||||||    
T  14936511 atacatcaccttttgttgacctaaatgtttcttctatataggaccagagggag 14936459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 22896538 - 22896582
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    |||||| |||||||||||||  ||| |||||||||||||||||||    
T  22896538 atacatcaacttttgttgacaaaaaattctcttataaataggacc 22896582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 32045157 - 32045209
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||||||||||||||||  ||||| ||| |||||||||||| | |||||||    
T  32045157 atacattaacttttgttgagttaaatatcttttataaataggatcggagggag 32045209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 33052848 - 33052804
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    |||||| ||||||| |||||| ||| |||||||||||||||||||    
T  33052848 atacatcaacttttattgacccaaaattctcttataaataggacc 33052804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 3e-28; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 9981724 - 9981652
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  9981724 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 9981652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 17556830 - 17556754
Alignment:
Q  1 atctagttaaaaattcagtccaaatacatt-aacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  17556830 atctagttaaaaattcagtccaaatacatttaacttttgttgacctaactttctcttataaataggaccagagggag 17556754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 26471118 - 26471190
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  26471118 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 26471190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 27159411 - 27159483
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  27159411 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 27159483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 31842848 - 31842920
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  31842848 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 31842920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 39402019 - 39402091
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  39402019 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 39402091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 44668146 - 44668218
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  44668146 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 44668218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 47216752 - 47216824
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  47216752 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 47216824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 14984914 - 14984847
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  14984914 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggacc 14984847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 1050965 - 1050893
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||    
T  1050965 atctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttctcttataaataggaccggagg 1050893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 11796010 - 11795938
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||    
T  11796010 atctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttctcttataaataggaccggagg 11795938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 23278054 - 23278126
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||    
T  23278054 atctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggagg 23278126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 34042773 - 34042701
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||    
T  34042773 atctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggagg 34042701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 44955259 - 44955331
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||    
T  44955259 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccggagg 44955331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 47588390 - 47588462
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  47588390 atctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccagagg 47588462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 47777534 - 47777601
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  47777534 atctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggacc 47777601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 25694396 - 25694321
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    ||||||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||||||| |||||||||    
T  25694396 atctagttaaaaattcaatccaaatacattcacttttattgatctaaatttctcttataaataggatcagagggag 25694321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 12483684 - 12483753
Alignment:
Q  4 tagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    ||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  12483684 tagttcaaaattcagtctaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 12483753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 47969772 - 47969704
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctc-ttataaataggacc 68  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  47969772 atctagttaaaaattcagtctaaatacatttacttttgttgacctaaatttctctttataaataggacc 47969704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 11897126 - 11897056
Alignment:
Q  6 gttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||||||||||| || |||||| ||||||||||||||||| |||||||||||||||||||| |||||||    
T  11897126 gttaaaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataggaccggagggag 11897056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 16448161 - 16448236
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||| ||| ||||||||||||| |||||| |||||||||||||| || |||||||||||||||||||| |||||||    
T  16448161 atctggttcaaaattcagtccagatacatcaacttttgttgacccaactttctcttataaataggaccggagggag 16448236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 11897130 - 11897182
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| |||||||    
T  11897130 atacatcaacttttgttgacccaaatttctcttataaataggaccggagggag 11897182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 12213530 - 12213602
Alignment:
Q  4 tagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||||||||||| || ||||||||||| ||||||||||||||  |||||||||||||| |||  |||||||    
T  12213530 tagttaaaaattcaatctaaatacattaatttttgttgacctaacattctcttataaataagactggagggag 12213602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 37552218 - 37552143
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||| ||||||||||||||||| |||||| |||| ||||||||  || ||| |||||||||||||||| |||||||    
T  37552218 atctggttaaaaattcagtccagatacatgaactgttgttgactcaactttatcttataaataggaccggagggag 37552143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 22 - 76
Target Start/End: Complemental strand, 12483684 - 12483630
Alignment:
Q  22 aaatacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  12483684 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 12483630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 11989853 - 11989796
Alignment:
Q  6 gttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaata 63  Q
    ||||||||||||||||||||| ||||  ||||||||||| || |||||||||||||||    
T  11989853 gttaaaaattcagtccaaatatattagtttttgttgacccaactttctcttataaata 11989796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 11796009 - 11796061
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  11796009 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 11796061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 14984913 - 14984965
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  14984913 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 14984965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 17556829 - 17556881
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| || |||||||||||||||||||| |||||||    
T  17556829 atacatcaacttttgttgacccaagtttctcttataaataggaccggagggag 17556881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 25694395 - 25694447
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  25694395 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 25694447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 27159412 - 27159360
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  27159412 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 27159360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 31842849 - 31842797
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  31842849 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 31842797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 39402020 - 39401968
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  39402020 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 39401968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 44668147 - 44668095
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  44668147 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 44668095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 44955260 - 44955216
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    |||||| |||||||||||||||||| |||||||||||||||||||    
T  44955260 atacatcaacttttgttgacctaaaattctcttataaataggacc 44955216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 47777535 - 47777483
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  47777535 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 47777483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 9981723 - 9981774
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagaggga 75  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| ||||||    
T  9981723 atacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 9981774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 12062635 - 12062682
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccaga 71  Q
    ||||||||| |||||||||  |||||||||||||||||||||||||||    
T  12062635 atacattaatttttgttgatttaaatttctcttataaataggaccaga 12062682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 1050964 - 1051016
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||| ||||||| ||| ||||||||||||||||||| |||||||    
T  1050964 atacatcaactttagttgacccaaaattctcttataaataggaccggagggag 1051016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 5392218 - 5392266
Alignment:
Q  20 ccaaatacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    |||||||||| ||||||| ||||||||||||||||||||| || |||||    
T  5392218 ccaaatacatcaacttttattgacctaaatttctcttatatattggacc 5392266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 26471119 - 26471067
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||| | ||| ||||||||||||||||||| |||||||    
T  26471119 atacatcaacttttgttgatccaaaattctcttataaataggaccggagggag 26471067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 34042772 - 34042824
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||| ||| |||||||    
T  34042772 atacatcaacttttgttgacccaaaattctcttataaatagaaccggagggag 34042824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 37552217 - 37552261
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    ||||||| | ||||||||||| |||||||||||||||||||||||    
T  37552217 atacattcatttttgttgacccaaatttctcttataaataggacc 37552261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 47216753 - 47216701
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| ||||||||||||||| ||| |||||||    
T  47216753 atacatcaacttttgttgacccaaaattctcttataaatagtaccggagggag 47216701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 12043661 - 12043616
Alignment:
Q  21 caaatacattaacttttgttgacctaaatttctcttataaatagga 66  Q
    ||||||||| ||||||||||||| ||||| ||| ||||||||||||    
T  12043661 caaatacatcaacttttgttgacttaaatatcttttataaatagga 12043616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 11989853 - 11989909
Alignment:
Q  20 ccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||||||| || |||| |||||  |||||||| |||||||||||||| |||||||    
T  11989853 ccaaatacatcaatttttattgactcaaatttcttttataaataggaccggagggag 11989909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 12043679 - 12043723
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    ||||||||| |||||||||  ||||||| ||||||||||||||||    
T  12043679 atacattaatttttgttgatttaaatttttcttataaataggacc 12043723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707 (Bit Score: 64; Significance: 1e-27; HSPs: 2)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 1412 - 1345
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggacc 68  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  1412 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggacc 1345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 1411 - 1453
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaatagga 66  Q
    |||||| |||||||||||||| ||| |||||||||||||||||    
T  1411 atacatcaacttttgttgacccaaaattctcttataaatagga 1453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 49579 - 49510
Alignment:
Q  4 tagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  49579 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 49510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 49579 - 49633
Alignment:
Q  22 aaatacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||||| |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  49579 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 49633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 61; Significance: 7e-26; HSPs: 2)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 6184 - 6256
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagg 73  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  6184 atctagttaaaaattcagtccacatacattcacttttgttgacctaaatttctcttataaataggaccggagg 6256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 6185 - 6133
Alignment:
Q  24 atacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| |||||||||||||| ||| || |||||||||||||||| |||||||    
T  6185 atacatcaacttttgttgacccaaaattttcttataaataggaccggagggag 6133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 13782 - 13845
Alignment:
Q  4 tagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggac 67  Q
    |||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||| ||||||    
T  13782 tagttaaaaattcagttcaaatatattaatttttgttgacctaaatttctcttataagtaggac 13845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 97 - 161
Target Start/End: Original strand, 18757 - 18821
Alignment:
Q  97 aatgctataaaacacccaccaacttttatgtaggtgtattttaatattgaacaccattttgtttt 161  Q
    |||| ||||||||||||||  |||||||||||||||| |||||  ||||||||||||||||||||    
T  18757 aatgatataaaacacccacttacttttatgtaggtgtgttttagcattgaacaccattttgtttt 18821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 231358 - 231431
Alignment:
Q  3 ctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||| ||||||||||||| |||||| |||||||||||| | || |||||||||||| ||||| | |||||||    
T  231358 ctagttcaaaattcagtccagatacataaacttttgttgatccaactttctcttataattaggatcggagggag 231431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 231350 - 231305
Alignment:
Q  31 aacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||||||||||||||  ||||| ||||||||||||| |||||||    
T  231350 aacttttgttgacctaatattctcctataaataggaccggagggag 231305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 76
Target Start/End: Original strand, 43 - 112
Alignment:
Q  6 gttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagagggag 76  Q
    |||||||||| ||||||||||||| |||||||||||||| |  |||||| ||||||||| ||| |||||||    
T  43 gttaaaaatttagtccaaatacatcaacttttgttgaccaatctttctc-tataaatagaaccggagggag 112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 12406 - 12480
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattaacttttgttgacctaaatttctcttataaataggaccagaggga 75  Q
    |||| ||||| |||| || ||||| |||  ||||||| |||||| |||| |||||||||||||||||| ||||||    
T  12406 atctggttaagaatttagaccaaacacaccaactttttttgaccaaaatatctcttataaataggaccggaggga 12480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University