View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21359_low_63 (Length: 204)

Name: NF21359_low_63
Description: NF21359
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21359_low_63
NF21359_low_63
[»] chr2 (12 HSPs)
chr2 (19-155)||(10157191-10157327)
chr2 (156-197)||(2914139-2914180)
chr2 (156-204)||(38997233-38997281)
chr2 (154-204)||(39103168-39103218)
chr2 (156-197)||(5726268-5726309)
chr2 (156-204)||(746598-746646)
chr2 (156-204)||(4034724-4034772)
chr2 (156-204)||(11185104-11185152)
chr2 (156-204)||(17600968-17601016)
chr2 (156-204)||(27024547-27024595)
chr2 (156-204)||(35158051-35158099)
chr2 (156-204)||(45371122-45371170)
[»] chr8 (14 HSPs)
chr8 (156-204)||(25248166-25248214)
chr8 (156-204)||(41862353-41862401)
chr8 (156-204)||(2379262-2379310)
chr8 (156-204)||(33730642-33730690)
chr8 (156-204)||(41981601-41981649)
chr8 (156-197)||(10378438-10378479)
chr8 (156-204)||(4447296-4447344)
chr8 (156-204)||(10646256-10646304)
chr8 (156-204)||(12033063-12033111)
chr8 (172-204)||(17718739-17718771)
chr8 (156-204)||(26196318-26196366)
chr8 (157-197)||(32114389-32114429)
chr8 (156-204)||(32984078-32984126)
chr8 (152-204)||(37301322-37301374)
[»] chr7 (15 HSPs)
chr7 (156-204)||(27018250-27018298)
chr7 (156-203)||(30076528-30076575)
chr7 (151-204)||(35767608-35767661)
chr7 (156-204)||(33695822-33695870)
chr7 (156-204)||(35356022-35356070)
chr7 (156-204)||(46898017-46898065)
chr7 (156-204)||(47740332-47740380)
chr7 (156-202)||(26579718-26579764)
chr7 (155-204)||(33423275-33423324)
chr7 (156-204)||(25893918-25893966)
chr7 (156-204)||(31625838-31625885)
chr7 (156-204)||(33393451-33393499)
chr7 (156-204)||(35752035-35752083)
chr7 (156-204)||(36389490-36389538)
chr7 (156-204)||(46913245-46913293)
[»] chr6 (13 HSPs)
chr6 (156-204)||(18101496-18101544)
chr6 (156-204)||(19415534-19415582)
chr6 (151-197)||(3291137-3291183)
chr6 (151-204)||(5882639-5882692)
chr6 (156-204)||(11988975-11989023)
chr6 (156-204)||(15965555-15965603)
chr6 (164-204)||(16703499-16703539)
chr6 (156-204)||(22551062-22551110)
chr6 (156-204)||(24168224-24168272)
chr6 (156-204)||(26377205-26377253)
chr6 (156-204)||(28948846-28948894)
chr6 (156-204)||(33452573-33452621)
chr6 (156-204)||(34527863-34527911)
[»] chr5 (13 HSPs)
chr5 (156-204)||(2484293-2484341)
chr5 (156-204)||(34451383-34451431)
chr5 (156-204)||(43262184-43262232)
chr5 (156-202)||(12648932-12648978)
chr5 (156-202)||(27501056-27501102)
chr5 (156-204)||(2585584-2585632)
chr5 (156-204)||(19295852-19295900)
chr5 (156-204)||(23195249-23195297)
chr5 (156-204)||(24253515-24253563)
chr5 (156-204)||(28424796-28424844)
chr5 (156-204)||(31293990-31294038)
chr5 (156-204)||(31939030-31939078)
chr5 (156-196)||(40278859-40278899)
[»] chr1 (24 HSPs)
chr1 (156-204)||(46784556-46784604)
chr1 (151-204)||(4953174-4953227)
chr1 (156-204)||(2450627-2450675)
chr1 (156-204)||(4808778-4808826)
chr1 (156-196)||(7561529-7561569)
chr1 (156-204)||(47671719-47671767)
chr1 (151-197)||(3285541-3285587)
chr1 (149-202)||(23984890-23984943)
chr1 (156-204)||(2657425-2657473)
chr1 (156-204)||(3611269-3611317)
chr1 (156-204)||(5981303-5981351)
chr1 (156-204)||(10928189-10928237)
chr1 (156-204)||(27983604-27983652)
chr1 (156-204)||(31308134-31308182)
chr1 (156-204)||(33073333-33073381)
chr1 (156-204)||(33187456-33187504)
chr1 (172-204)||(34752331-34752363)
chr1 (156-204)||(41467633-41467681)
chr1 (156-204)||(41895165-41895213)
chr1 (156-204)||(44662103-44662151)
chr1 (156-204)||(45538286-45538334)
chr1 (156-204)||(48373628-48373676)
chr1 (164-204)||(49253984-49254024)
chr1 (156-204)||(49398989-49399037)
[»] chr4 (29 HSPs)
chr4 (147-204)||(6020061-6020118)
chr4 (156-204)||(26091259-26091307)
chr4 (156-204)||(29777258-29777306)
chr4 (156-204)||(31914330-31914378)
chr4 (156-204)||(34552441-34552489)
chr4 (156-204)||(41632008-41632056)
chr4 (156-204)||(43471696-43471744)
chr4 (157-204)||(397535-397582)
chr4 (157-204)||(41702461-41702508)
chr4 (156-198)||(53834055-53834097)
chr4 (156-197)||(31532136-31532177)
chr4 (156-197)||(36532831-36532872)
chr4 (151-204)||(43891050-43891103)
chr4 (156-197)||(55519967-55520008)
chr4 (156-204)||(3170759-3170807)
chr4 (156-204)||(9997932-9997980)
chr4 (156-204)||(19387689-19387737)
chr4 (156-204)||(33049014-33049062)
chr4 (156-204)||(34276680-34276728)
chr4 (156-204)||(39077678-39077726)
chr4 (156-204)||(45633780-45633828)
chr4 (156-204)||(47812028-47812076)
chr4 (156-204)||(50234133-50234181)
chr4 (172-204)||(51363140-51363172)
chr4 (157-197)||(51951821-51951861)
chr4 (164-204)||(52461485-52461525)
chr4 (156-204)||(54086541-54086589)
chr4 (156-204)||(54574941-54574989)
chr4 (164-204)||(54608095-54608135)
[»] chr3 (21 HSPs)
chr3 (147-204)||(55000170-55000227)
chr3 (156-196)||(27066979-27067019)
chr3 (156-196)||(35748312-35748352)
chr3 (156-204)||(43612048-43612096)
chr3 (156-202)||(7755308-7755354)
chr3 (150-204)||(51143939-51143993)
chr3 (155-204)||(51170033-51170082)
chr3 (156-204)||(22399229-22399277)
chr3 (156-204)||(25353676-25353724)
chr3 (156-196)||(30251502-30251542)
chr3 (164-204)||(34279730-34279770)
chr3 (156-204)||(38156633-38156681)
chr3 (156-204)||(38416725-38416773)
chr3 (156-204)||(40643933-40643981)
chr3 (156-204)||(44222962-44223010)
chr3 (156-204)||(47257926-47257974)
chr3 (156-204)||(48739234-48739282)
chr3 (156-204)||(49330170-49330218)
chr3 (156-204)||(50731915-50731963)
chr3 (156-204)||(50780893-50780941)
chr3 (151-199)||(52864627-52864675)
[»] scaffold0949 (1 HSPs)
scaffold0949 (156-204)||(2002-2050)
[»] scaffold0092 (1 HSPs)
scaffold0092 (156-204)||(39557-39605)
[»] scaffold0007 (1 HSPs)
scaffold0007 (156-204)||(176787-176835)


Alignment Details
Target: chr2 (Bit Score: 91; Significance: 3e-44; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 19 - 155
Target Start/End: Original strand, 10157191 - 10157327
Alignment:
Q  19 tcattctctctttgtttttccctatcttgttttctatcatatttcattcatgactcatatgaggctattcnnnnnnnnnnnnnnaataaaaatatcttgt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||              ||||||||||||||||    
T  10157191 tcattctctctttgtttttccctatcttgttttctatcatatttcattcatgactcatatgaggctattcttttttgtttttttaataaaaatatcttgt 10157290  T
Q  119 tatggggaagagtcacaagagtagagataaagaaaat 155  Q
    ||||||||||||||||||||||| |||||||||||||    
T  10157291 tatggggaagagtcacaagagtaaagataaagaaaat 10157327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 2914139 - 2914180
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttac 197  Q
    ||||||| ||||||||||||||||||||| ||||||||||||    
T  2914139 gtgacaactaggatatccatggaagaatggtgggtaatttac 2914180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 38997281 - 38997233
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| |||||||||||||||| |||||||||||| ||||||    
T  38997281 gtgacaactagggtatccatggaagaatggtgggtaatttaccccaacc 38997233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 204
Target Start/End: Complemental strand, 39103218 - 39103168
Alignment:
Q  154 atgtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  39103218 atgtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 39103168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 5726309 - 5726268
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttac 197  Q
    ||||||| |||| |||||||||||||||| ||||||||||||    
T  5726309 gtgacaactagggtatccatggaagaatggtgggtaatttac 5726268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 746646 - 746598
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  746646 gtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 746598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 4034772 - 4034724
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  4034772 gtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 4034724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 11185152 - 11185104
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  11185152 gtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 11185104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 17601016 - 17600968
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  17601016 gtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 17600968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 27024595 - 27024547
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || |||||||||||| ||||||||||||| ||||||    
T  27024595 gtgacaactagggtacccatggaagaataatgggtaatttaccccaacc 27024547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 35158051 - 35158099
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||| |||||||||||||||||||| ||||||    
T  35158051 gtgacaactaggctacccatgaaagaatgatgggtaatttaccccaacc 35158099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 45371170 - 45371122
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  45371170 gtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 45371122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 25248214 - 25248166
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  25248214 gtgacaattagggtatccatggaagaatgatgggtaatttactccaacc 25248166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 41862401 - 41862353
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| ||||||| ||||||||||||| |||||||||||||||||||    
T  41862401 gtgacaattaggatacccatggaagaatggtgggtaatttactccaacc 41862353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 2379310 - 2379262
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| |||||||| |||||||||||||||||||| ||||||    
T  2379310 gtgacaactaggctatccatgaaagaatgatgggtaatttaccccaacc 2379262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 33730642 - 33730690
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| |||||||||||||||| |||||||||||| ||||||    
T  33730642 gtgacaactagggtatccatggaagaatggtgggtaatttaccccaacc 33730690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 41981649 - 41981601
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| |||||||||||||||| |||||||||||| ||||||    
T  41981649 gtgacaactagggtatccatggaagaatggtgggtaatttaccccaacc 41981601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 10378479 - 10378438
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttac 197  Q
    ||||||| ||||||| ||||||||||||| ||||||||||||    
T  10378479 gtgacaactaggatacccatggaagaatggtgggtaatttac 10378438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 4447296 - 4447344
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  4447296 gtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 4447344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 10646304 - 10646256
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  10646304 gtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 10646256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 12033111 - 12033063
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  12033111 gtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 12033063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 204
Target Start/End: Original strand, 17718739 - 17718771
Alignment:
Q  172 ccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||||||||| |||||||||||||||||||    
T  17718739 ccatggaagaatggtgggtaatttactccaacc 17718771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 26196318 - 26196366
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||||||| ||||||| |||| |||||||||||| ||||||    
T  26196318 gtgacaactaggatattcatggaaaaatggtgggtaatttaccccaacc 26196366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 197
Target Start/End: Complemental strand, 32114429 - 32114389
Alignment:
Q  157 tgacaagtaggatatccatggaagaatgatgggtaatttac 197  Q
    |||||| ||||||| ||||||||||||| ||||||||||||    
T  32114429 tgacaactaggatacccatggaagaatggtgggtaatttac 32114389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 32984078 - 32984126
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  32984078 gtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 32984126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 37301322 - 37301374
Alignment:
Q  152 aaatgtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||||||| |||| || ||||| ||||||| |||||||||||| ||||||    
T  37301322 aaatgtgacaactagggtacccatgaaagaatggtgggtaatttaccccaacc 37301374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000005; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 27018298 - 27018250
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| ||||||| ||||||||||||| |||||||||||||||||||    
T  27018298 gtgacaactaggatacccatggaagaatggtgggtaatttactccaacc 27018250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 203
Target Start/End: Original strand, 30076528 - 30076575
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaac 203  Q
    ||||||| |||| ||||||||||||||||||||||||||||| |||||    
T  30076528 gtgacaactagggtatccatggaagaatgatgggtaatttacgccaac 30076575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 35767661 - 35767608
Alignment:
Q  151 aaaatgtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    |||| ||||||| |||| |||||||||||||||| |||||||||||| ||||||    
T  35767661 aaaaggtgacaactagggtatccatggaagaatggtgggtaatttaccccaacc 35767608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 33695822 - 33695870
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| |||||||||||||||| |||||||||||| ||||||    
T  33695822 gtgacaactagggtatccatggaagaatggtgggtaatttaccccaacc 33695870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 35356070 - 35356022
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| ||||||| ||||||||||||| |||||||||||| ||||||    
T  35356070 gtgacaactaggatacccatggaagaatggtgggtaatttaccccaacc 35356022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 46898017 - 46898065
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| |||||||||||||||| |||||||||||| ||||||    
T  46898017 gtgacaactagggtatccatggaagaatggtgggtaatttaccccaacc 46898065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 47740332 - 47740380
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| |||||||||||||||| |||||||||||| ||||||    
T  47740332 gtgacaactagggtatccatggaagaatggtgggtaatttaccccaacc 47740380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 202
Target Start/End: Original strand, 26579718 - 26579764
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaa 202  Q
    ||||||| |||| |||||||||||||||| |||||||||||| ||||    
T  26579718 gtgacaactagggtatccatggaagaatggtgggtaatttaccccaa 26579764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 204
Target Start/End: Original strand, 33423275 - 33423324
Alignment:
Q  155 tgtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    |||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  33423275 tgtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 33423324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 25893918 - 25893966
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  25893918 gtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 25893966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 31625885 - 31625838
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| ||||||| ||||||||||||| | |||||||||||||||||    
T  31625885 gtgacaactaggatacccatggaagaatggt-ggtaatttactccaacc 31625838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 33393499 - 33393451
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  33393499 gtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 33393451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 35752035 - 35752083
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||| |||||||||||||||||||| ||||||    
T  35752035 gtgacaactaggctacccatgaaagaatgatgggtaatttaccccaacc 35752083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 36389538 - 36389490
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  36389538 gtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 36389490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 46913293 - 46913245
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  46913293 gtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 46913245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000005; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 18101496 - 18101544
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||||    
T  18101496 gtgacaactaggatacccatggaagaatgatgggtaatttaccccaacc 18101544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 19415534 - 19415582
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || |||||||||||||||||||||||||||||||||    
T  19415534 gtgacaactagggtacccatggaagaatgatgggtaatttactccaacc 19415582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 197
Target Start/End: Complemental strand, 3291183 - 3291137
Alignment:
Q  151 aaaatgtgacaagtaggatatccatggaagaatgatgggtaatttac 197  Q
    |||| ||||||| |||| |||||||| ||||||||||||||||||||    
T  3291183 aaaaggtgacaattaggctatccatgaaagaatgatgggtaatttac 3291137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 5882692 - 5882639
Alignment:
Q  151 aaaatgtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    |||| ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  5882692 aaaaggtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 5882639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 11988975 - 11989023
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  11988975 gtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 11989023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 15965603 - 15965555
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||| |||||||||||||||||||| ||||||    
T  15965603 gtgacaactaggctacccatgaaagaatgatgggtaatttaccccaacc 15965555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 16703539 - 16703499
Alignment:
Q  164 taggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||||||||||||||| ||||||||| ||||||    
T  16703539 taggatacccatggaagaatgatgcgtaatttaccccaacc 16703499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 22551062 - 22551110
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  22551062 gtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 22551110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 24168272 - 24168224
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  24168272 gtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 24168224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 26377205 - 26377253
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  26377205 gtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 26377253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 28948846 - 28948894
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||| |||||||||||||||||||| ||||||    
T  28948846 gtgacaactaggctacccatgaaagaatgatgggtaatttaccccaacc 28948894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 33452573 - 33452621
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| ||||||| ||||||||||||| || ||||||||| ||||||    
T  33452573 gtgacaactaggatacccatggaagaatggtgagtaatttaccccaacc 33452621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 34527863 - 34527911
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  34527863 gtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 34527911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000005; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 2484293 - 2484341
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| ||||||| ||||||||||||| |||||||||||||||||||    
T  2484293 gtgacaactaggatacccatggaagaatggtgggtaatttactccaacc 2484341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 34451431 - 34451383
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| |||||||||||||||| |||||||||||| ||||||    
T  34451431 gtgacaactagggtatccatggaagaatggtgggtaatttaccccaacc 34451383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 43262184 - 43262232
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || |||||||||||||||||||||||||| ||||||    
T  43262184 gtgacaactagggtacccatggaagaatgatgggtaatttaccccaacc 43262232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 202
Target Start/End: Complemental strand, 12648978 - 12648932
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaa 202  Q
    ||||||| |||| |||||||||||||||| |||||||||||| ||||    
T  12648978 gtgacaactagggtatccatggaagaatggtgggtaatttaccccaa 12648932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 202
Target Start/End: Original strand, 27501056 - 27501102
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaa 202  Q
    ||||||| |||| || |||||||||||||||||||||||||| ||||    
T  27501056 gtgacaactagggtacccatggaagaatgatgggtaatttaccccaa 27501102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 2585632 - 2585584
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| ||||||||||| |||| |||||||||||| ||||||    
T  2585632 gtgacaattagggtatccatggaaaaatggtgggtaatttaccccaacc 2585584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 19295900 - 19295852
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||| |||||||||||||||||||| ||||||    
T  19295900 gtgacaactaggctacccatgaaagaatgatgggtaatttaccccaacc 19295852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 23195249 - 23195297
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||| |||||||| ||||||||||||||||||    
T  23195249 gtgacaactaggctacccatgaaagaatgacgggtaatttactccaacc 23195297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 24253563 - 24253515
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  24253563 gtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 24253515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 28424796 - 28424844
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||  |||||||||||||||| |||||||||||| ||||||    
T  28424796 gtgacaactagagtatccatggaagaatggtgggtaatttaccccaacc 28424844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 31293990 - 31294038
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||| ||||||| |||||||||||||||||||    
T  31293990 gtgacaactagggtacccatgtaagaatggtgggtaatttactccaacc 31294038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 31939078 - 31939030
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  31939078 gtgacaattagggtacccatggaagaatggtgggtaatttaccccaacc 31939030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 196
Target Start/End: Original strand, 40278859 - 40278899
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaattta 196  Q
    ||||||| |||| ||| ||||||||||||||||||||||||    
T  40278859 gtgacaactagggtattcatggaagaatgatgggtaattta 40278899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000005; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 46784604 - 46784556
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || |||||||||||||||||||||||||||||||||    
T  46784604 gtgacaattagggtacccatggaagaatgatgggtaatttactccaacc 46784556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 4953227 - 4953174
Alignment:
Q  151 aaaatgtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    |||| ||||||| |||| |||||||| |||||||||||||||||||| ||||||    
T  4953227 aaaaggtgacaattaggctatccatgaaagaatgatgggtaatttaccccaacc 4953174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 2450675 - 2450627
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| ||||||| ||||||||||||||| |||||||||| ||||||    
T  2450675 gtgacaactaggatacccatggaagaatgataggtaatttaccccaacc 2450627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 4808826 - 4808778
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| |||||||||||||||| |||||||||||| ||||||    
T  4808826 gtgacaactagggtatccatggaagaatggtgggtaatttaccccaacc 4808778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 196
Target Start/End: Original strand, 7561529 - 7561569
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaattta 196  Q
    ||||||| |||| ||||||||||||||||||||||||||||    
T  7561529 gtgacaactagggtatccatggaagaatgatgggtaattta 7561569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 47671767 - 47671719
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || |||||||||||||||||||||||||| ||||||    
T  47671767 gtgacaactagggtacccatggaagaatgatgggtaatttaccccaacc 47671719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 197
Target Start/End: Complemental strand, 3285587 - 3285541
Alignment:
Q  151 aaaatgtgacaagtaggatatccatggaagaatgatgggtaatttac 197  Q
    |||||||||||| |||| || ||||||||||||| ||||||||||||    
T  3285587 aaaatgtgacaattagggtacccatggaagaatggtgggtaatttac 3285541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 202
Target Start/End: Complemental strand, 23984943 - 23984890
Alignment:
Q  149 agaaaatgtgacaagtaggatatccatggaagaatgatgggtaatttactccaa 202  Q
    |||||| ||||||| |||| || ||||||||||||| |||||||||||| ||||    
T  23984943 agaaaaggtgacaactagggtacccatggaagaatggtgggtaatttaccccaa 23984890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 2657473 - 2657425
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||| |||||||||||||||||||| ||||||    
T  2657473 gtgacaactaggctacccatgaaagaatgatgggtaatttaccccaacc 2657425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 3611317 - 3611269
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  3611317 gtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 3611269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 5981351 - 5981303
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| ||| |||||||||||||||    
T  5981351 gtgacaactagggtacccatggaagaatggtggataatttactccaacc 5981303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 10928237 - 10928189
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| ||| |||||||||||| |||||||||||| ||||||    
T  10928237 gtgacaactagggtattcatggaagaatggtgggtaatttaccccaacc 10928189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 27983604 - 27983652
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  27983604 gtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 27983652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 31308182 - 31308134
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  31308182 gtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 31308134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 33073381 - 33073333
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  33073381 gtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 33073333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 33187504 - 33187456
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  33187504 gtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 33187456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 204
Target Start/End: Original strand, 34752331 - 34752363
Alignment:
Q  172 ccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||| |||||||||||||||||||||||||||    
T  34752331 ccatgaaagaatgatgggtaatttactccaacc 34752363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 41467633 - 41467681
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||| |||||||||||||||||||| ||||||    
T  41467633 gtgacaactaggctacccatgaaagaatgatgggtaatttaccccaacc 41467681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 41895165 - 41895213
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||| |||||||||||||||||||| ||||||    
T  41895165 gtgacaactaggctacccatgaaagaatgatgggtaatttacaccaacc 41895213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 44662151 - 44662103
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  44662151 gtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 44662103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 45538334 - 45538286
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  45538334 gtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 45538286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 48373676 - 48373628
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| || | |||||||||||||||| |||||||||||| ||||||    
T  48373676 gtgacaactaaggtatccatggaagaatggtgggtaatttaccccaacc 48373628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 49253984 - 49254024
Alignment:
Q  164 taggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    |||| |||||||||||||||| |||||||||||| ||||||    
T  49253984 tagggtatccatggaagaatggtgggtaatttaccccaacc 49254024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 49398989 - 49399037
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| ||||||| ||||||||||||  |||||||||||| ||||||    
T  49398989 gtgacaactaggatacccatggaagaatagtgggtaatttaccccaacc 49399037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000003; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 204
Target Start/End: Complemental strand, 6020118 - 6020061
Alignment:
Q  147 aaagaaaatgtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  6020118 aaagaaattgtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 6020061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 26091259 - 26091307
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||||||||||    
T  26091259 gtgacaactagggtacccatggaagaatggtgggtaatttactccaacc 26091307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 29777258 - 29777306
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| |||||||||||||||| |||||||||||| ||||||    
T  29777258 gtgacaattagggtatccatggaagaatggtgggtaatttaccccaacc 29777306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 31914378 - 31914330
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || |||||||||||||||||||||||||| ||||||    
T  31914378 gtgacaactagggtacccatggaagaatgatgggtaatttaccccaacc 31914330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 34552489 - 34552441
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||| |||||||||||||||||||||||||||    
T  34552489 gtgacaactaggctacccatgaaagaatgatgggtaatttactccaacc 34552441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 41632008 - 41632056
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| ||||||| ||||| |||||||||||||||||||| ||||||    
T  41632008 gtgacaactaggatacccatgaaagaatgatgggtaatttaccccaacc 41632056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 43471696 - 43471744
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| |||||||||||||||| |||||||||||| ||||||    
T  43471696 gtgacaactagggtatccatggaagaatggtgggtaatttaccccaacc 43471744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 157 - 204
Target Start/End: Complemental strand, 397582 - 397535
Alignment:
Q  157 tgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    |||||| |||| |||||||||||||||| |||||||||||| ||||||    
T  397582 tgacaactagggtatccatggaagaatggtgggtaatttaccccaacc 397535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 157 - 204
Target Start/End: Original strand, 41702461 - 41702508
Alignment:
Q  157 tgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    |||||| |||| |||||||||||||||| |||||||||||| ||||||    
T  41702461 tgacaactagggtatccatggaagaatggtgggtaatttaccccaacc 41702508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 198
Target Start/End: Original strand, 53834055 - 53834097
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttact 198  Q
    ||||||| |||| |||||||||||||||| |||||||||||||    
T  53834055 gtgacaactagggtatccatggaagaatggtgggtaatttact 53834097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 31532136 - 31532177
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttac 197  Q
    ||||||| |||| || ||||||||||||||||||||||||||    
T  31532136 gtgacaactagggtacccatggaagaatgatgggtaatttac 31532177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 36532831 - 36532872
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttac 197  Q
    ||||||| ||||||| ||||||||||||| ||||||||||||    
T  36532831 gtgacaactaggatacccatggaagaatggtgggtaatttac 36532872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 43891103 - 43891050
Alignment:
Q  151 aaaatgtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    |||| ||||||| || | |||||||||||||||| |||||||||||| ||||||    
T  43891103 aaaaggtgacaactatggtatccatggaagaatggtgggtaatttaccccaacc 43891050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 55520008 - 55519967
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttac 197  Q
    ||||||| ||||||| ||||||||||||| ||||||||||||    
T  55520008 gtgacaactaggatacccatggaagaatggtgggtaatttac 55519967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 3170807 - 3170759
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||  |||||||||||||||| |||||||||||| ||||||    
T  3170807 gtgacaactagagtatccatggaagaatggtgggtaatttaccccaacc 3170759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 9997932 - 9997980
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  9997932 gtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 9997980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 19387689 - 19387737
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  19387689 gtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 19387737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 33049062 - 33049014
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  33049062 gtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 33049014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 34276728 - 34276680
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  34276728 gtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 34276680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 39077726 - 39077678
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  39077726 gtgacaactagggtacccatggaagaatgttgggtaatttaccccaacc 39077678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 45633780 - 45633828
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||| |||||||||||||||||||| ||||||    
T  45633780 gtgacaactaggctacccatgaaagaatgatgggtaatttaccccaacc 45633828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 47812076 - 47812028
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| ||||||| |||||||| |||||||||||| ||||||    
T  47812076 gtgacaattagggtatccatagaagaatggtgggtaatttaccccaacc 47812028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 50234181 - 50234133
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| ||||||| |||||||| |||||||||||| ||||||    
T  50234181 gtgacaactagggtatccatagaagaatggtgggtaatttaccccaacc 50234133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 204
Target Start/End: Complemental strand, 51363172 - 51363140
Alignment:
Q  172 ccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||||||||| |||||||||||||||||||    
T  51363172 ccatggaagaatggtgggtaatttactccaacc 51363140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 197
Target Start/End: Complemental strand, 51951861 - 51951821
Alignment:
Q  157 tgacaagtaggatatccatggaagaatgatgggtaatttac 197  Q
    |||||| |||| |||||||||||||||| ||||||||||||    
T  51951861 tgacaattagggtatccatggaagaatggtgggtaatttac 51951821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 52461525 - 52461485
Alignment:
Q  164 taggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    |||| |||||||| |||||||||||||||||||| ||||||    
T  52461525 taggctatccatgaaagaatgatgggtaatttaccccaacc 52461485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 54086589 - 54086541
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  54086589 gtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 54086541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 54574941 - 54574989
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  54574941 gtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 54574989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 54608135 - 54608095
Alignment:
Q  164 taggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    |||| |||||||||||||||||||| |||||||| ||||||    
T  54608135 tagggtatccatggaagaatgatggataatttaccccaacc 54608095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000003; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 204
Target Start/End: Original strand, 55000170 - 55000227
Alignment:
Q  147 aaagaaaatgtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    |||||||| ||||||| |||| || ||||| |||||||||||||||||||| ||||||    
T  55000170 aaagaaaaggtgacaactaggctacccatgaaagaatgatgggtaatttaccccaacc 55000227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 196
Target Start/End: Original strand, 27066979 - 27067019
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaattta 196  Q
    ||||||| |||| ||||||||||||||||||||||||||||    
T  27066979 gtgacaactagggtatccatggaagaatgatgggtaattta 27067019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 196
Target Start/End: Original strand, 35748312 - 35748352
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaattta 196  Q
    ||||||| |||| ||||||||||||||||||||||||||||    
T  35748312 gtgacaactagggtatccatggaagaatgatgggtaattta 35748352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 43612048 - 43612096
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || |||||||||||||||||||||||||| ||||||    
T  43612048 gtgacaactagggtacccatggaagaatgatgggtaatttaccccaacc 43612096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 202
Target Start/End: Original strand, 7755308 - 7755354
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaa 202  Q
    |||||||||||| || ||||||||||||||||||| |||||| ||||    
T  7755308 gtgacaagtagggtacccatggaagaatgatgggttatttaccccaa 7755354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 204
Target Start/End: Complemental strand, 51143993 - 51143939
Alignment:
Q  150 gaaaatgtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||||||||| |||| || ||||| || |||| |||||||||||||||||||    
T  51143993 gaaaatgtgacaactagggtacccatgaaaaaatggtgggtaatttactccaacc 51143939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 204
Target Start/End: Original strand, 51170033 - 51170082
Alignment:
Q  155 tgtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    |||||||| || | || ||||||||||||| |||||||||||||||||||    
T  51170033 tgtgacaactatggtacccatggaagaatggtgggtaatttactccaacc 51170082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 22399277 - 22399229
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  22399277 gtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 22399229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 25353724 - 25353676
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  25353724 gtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 25353676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 196
Target Start/End: Original strand, 30251502 - 30251542
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaattta 196  Q
    ||||||| |||| |||||||||||||||| |||||||||||    
T  30251502 gtgacaactagggtatccatggaagaatggtgggtaattta 30251542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 34279730 - 34279770
Alignment:
Q  164 taggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    |||| |||||||| |||||||||||||||||||| ||||||    
T  34279730 taggctatccatgaaagaatgatgggtaatttaccccaacc 34279770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 38156633 - 38156681
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||| |||||||||||||||||||| ||||||    
T  38156633 gtgacaactaggctacccatgaaagaatgatgggtaatttaccccaacc 38156681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 38416725 - 38416773
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  38416725 gtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 38416773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 40643981 - 40643933
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  40643981 gtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 40643933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 44223010 - 44222962
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  44223010 gtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 44222962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 47257974 - 47257926
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  47257974 gtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 47257926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 48739234 - 48739282
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||| ||||||    
T  48739234 gtgacaactagggtacccatggaagaatggtgggtaatttaccccaacc 48739282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 49330218 - 49330170
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || |||||||||||||||| ||||||||| ||||||    
T  49330218 gtgacaactagggtacccatggaagaatgatgagtaatttaccccaacc 49330170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 50731915 - 50731963
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||| ||||||||||||||    
T  50731915 gtgacaactagggtacccatggaagaatggtgggaaatttactccaacc 50731963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 50780941 - 50780893
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||| ||||||||||||||    
T  50780941 gtgacaactagggtacccatggaagaatggtgggaaatttactccaacc 50780893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 199
Target Start/End: Complemental strand, 52864675 - 52864627
Alignment:
Q  151 aaaatgtgacaagtaggatatccatggaagaatgatgggtaatttactc 199  Q
    |||| ||||||| |||| || ||||||||||||| ||||||||||||||    
T  52864675 aaaaggtgacaactagggtacccatggaagaatggtgggtaatttactc 52864627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0949 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0949
Description:

Target: scaffold0949; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 2050 - 2002
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || ||||||||||||| |||||||||||||||||||    
T  2050 gtgacaactagggtacccatggaagaatggtgggtaatttactccaacc 2002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 39557 - 39605
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| |||| || |||||||||||||||||||||||||| ||||||    
T  39557 gtgacaactagggtacccatggaagaatgatgggtaatttaccccaacc 39605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 176835 - 176787
Alignment:
Q  156 gtgacaagtaggatatccatggaagaatgatgggtaatttactccaacc 204  Q
    ||||||| ||||||| |||| |||||||| |||||||||||| ||||||    
T  176835 gtgacaactaggatacccatagaagaatggtgggtaatttaccccaacc 176787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University