View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21364_low_5 (Length: 404)

Name: NF21364_low_5
Description: NF21364
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21364_low_5
NF21364_low_5
[»] chr8 (24 HSPs)
chr8 (24-290)||(3240090-3240357)
chr8 (48-98)||(21237702-21237752)
chr8 (27-99)||(14585605-14585676)
chr8 (27-99)||(18890818-18890889)
chr8 (27-99)||(23230550-23230620)
chr8 (43-113)||(24186786-24186858)
chr8 (43-111)||(36948565-36948633)
chr8 (43-99)||(8443649-8443704)
chr8 (26-98)||(8826116-8826187)
chr8 (26-99)||(24099369-24099446)
chr8 (27-99)||(41896416-41896487)
chr8 (60-99)||(43834144-43834183)
chr8 (43-93)||(1239531-1239581)
chr8 (43-105)||(27498491-27498553)
chr8 (50-99)||(20559880-20559929)
chr8 (50-99)||(20571442-20571491)
chr8 (57-98)||(26469338-26469379)
chr8 (43-96)||(40619200-40619253)
chr8 (43-99)||(7883368-7883423)
chr8 (49-93)||(15344217-15344261)
chr8 (49-93)||(15433282-15433326)
chr8 (49-93)||(15524586-15524630)
chr8 (43-99)||(20553373-20553429)
chr8 (43-99)||(40211432-40211488)
[»] chr2 (23 HSPs)
chr2 (27-198)||(12648038-12648208)
chr2 (27-113)||(43397234-43397320)
chr2 (28-191)||(29574747-29574910)
chr2 (28-98)||(24461351-24461421)
chr2 (27-99)||(36691788-36691859)
chr2 (27-98)||(3308853-3308923)
chr2 (28-98)||(4904261-4904330)
chr2 (26-99)||(6358990-6359063)
chr2 (50-111)||(19596013-19596073)
chr2 (27-99)||(11985345-11985416)
chr2 (27-99)||(29279685-29279756)
chr2 (53-99)||(14955436-14955482)
chr2 (27-105)||(31788364-31788442)
chr2 (31-99)||(14423236-14423303)
chr2 (27-99)||(32448736-32448808)
chr2 (27-99)||(38445080-38445151)
chr2 (48-99)||(31128914-31128965)
chr2 (161-199)||(18107983-18108021)
chr2 (27-99)||(9169373-9169443)
chr2 (48-109)||(16261268-16261328)
chr2 (43-99)||(4041724-4041780)
chr2 (43-99)||(4099017-4099073)
chr2 (27-87)||(31210722-31210781)
[»] scaffold0009 (1 HSPs)
scaffold0009 (26-198)||(58192-58363)
[»] chr3 (24 HSPs)
chr3 (26-198)||(50194396-50194567)
chr3 (26-99)||(29921956-29922029)
chr3 (26-99)||(29971109-29971182)
chr3 (43-97)||(12947410-12947464)
chr3 (26-99)||(53508124-53508197)
chr3 (26-97)||(35175304-35175376)
chr3 (43-111)||(33579759-33579827)
chr3 (27-99)||(36461545-36461616)
chr3 (27-99)||(42460650-42460720)
chr3 (28-99)||(47896055-47896125)
chr3 (43-92)||(44804934-44804983)
chr3 (27-99)||(20987913-20987984)
chr3 (27-90)||(52116121-52116187)
chr3 (32-99)||(22290841-22290908)
chr3 (157-198)||(29921857-29921898)
chr3 (157-198)||(29971010-29971051)
chr3 (27-99)||(43488704-43488775)
chr3 (27-113)||(16235307-16235393)
chr3 (31-99)||(51487004-51487073)
chr3 (50-99)||(54148892-54148941)
chr3 (67-99)||(7887562-7887594)
chr3 (27-99)||(9797643-9797714)
chr3 (27-99)||(21289935-21290006)
chr3 (43-99)||(52923246-52923302)
[»] chr5 (21 HSPs)
chr5 (30-99)||(10332668-10332737)
chr5 (43-112)||(8985062-8985132)
chr5 (27-99)||(2979427-2979498)
chr5 (27-99)||(14726575-14726647)
chr5 (27-99)||(11977049-11977122)
chr5 (27-99)||(6216802-6216873)
chr5 (27-99)||(8096611-8096683)
chr5 (31-99)||(24229902-24229970)
chr5 (27-99)||(28541027-28541098)
chr5 (27-99)||(39567198-39567269)
chr5 (27-105)||(13007126-13007203)
chr5 (27-99)||(15571389-15571460)
chr5 (27-99)||(19103588-19103659)
chr5 (49-99)||(7036131-7036181)
chr5 (43-113)||(8088342-8088412)
chr5 (27-105)||(9113839-9113916)
chr5 (27-99)||(26878195-26878264)
chr5 (157-198)||(8985180-8985221)
chr5 (27-99)||(34945325-34945395)
chr5 (27-99)||(38597700-38597771)
chr5 (29-113)||(41749211-41749295)
[»] chr1 (22 HSPs)
chr1 (26-112)||(47132793-47132879)
chr1 (27-98)||(16161739-16161809)
chr1 (27-99)||(23291756-23291828)
chr1 (27-113)||(44543163-44543248)
chr1 (26-99)||(9341630-9341703)
chr1 (27-99)||(1602022-1602093)
chr1 (27-99)||(1742187-1742259)
chr1 (48-96)||(12635076-12635124)
chr1 (35-99)||(37720243-37720306)
chr1 (42-113)||(15492184-15492254)
chr1 (26-99)||(13075749-13075821)
chr1 (27-99)||(13144926-13144997)
chr1 (27-99)||(21947732-21947803)
chr1 (27-96)||(31918899-31918966)
chr1 (26-99)||(32679211-32679285)
chr1 (34-136)||(36775838-36775938)
chr1 (27-99)||(49626816-49626889)
chr1 (27-111)||(8212024-8212107)
chr1 (27-99)||(40163614-40163685)
chr1 (48-99)||(29738770-29738821)
chr1 (157-195)||(32679342-32679380)
chr1 (43-99)||(7337792-7337848)
[»] chr7 (25 HSPs)
chr7 (30-99)||(41553554-41553623)
chr7 (30-99)||(41553899-41553968)
chr7 (30-99)||(41554244-41554313)
chr7 (27-99)||(28476126-28476197)
chr7 (27-198)||(22742745-22742914)
chr7 (27-133)||(24350958-24351063)
chr7 (31-99)||(38051185-38051253)
chr7 (48-99)||(35665266-35665317)
chr7 (34-99)||(37837579-37837644)
chr7 (27-99)||(48061329-48061399)
chr7 (27-98)||(12141422-12141491)
chr7 (27-99)||(13797046-13797117)
chr7 (27-99)||(30756933-30757004)
chr7 (27-99)||(34899721-34899792)
chr7 (31-99)||(39171708-39171776)
chr7 (27-99)||(40993088-40993159)
chr7 (43-99)||(47590217-47590273)
chr7 (31-98)||(5078513-5078579)
chr7 (26-99)||(11343703-11343777)
chr7 (27-111)||(19404871-19404952)
chr7 (27-96)||(42978518-42978587)
chr7 (53-113)||(1749284-1749343)
chr7 (27-99)||(9450251-9450322)
chr7 (66-98)||(26583644-26583676)
chr7 (27-99)||(48316926-48316997)
[»] chr6 (19 HSPs)
chr6 (26-113)||(30493420-30493506)
chr6 (27-99)||(30776570-30776641)
chr6 (27-98)||(32191845-32191916)
chr6 (27-104)||(11321583-11321659)
chr6 (52-113)||(28981067-28981128)
chr6 (27-99)||(8102624-8102695)
chr6 (27-105)||(34018459-34018536)
chr6 (26-98)||(1933809-1933882)
chr6 (50-135)||(22571358-22571442)
chr6 (48-136)||(26588602-26588689)
chr6 (26-88)||(7976293-7976355)
chr6 (43-133)||(3913703-3913794)
chr6 (27-99)||(33053282-33053353)
chr6 (27-99)||(1523310-1523377)
chr6 (27-99)||(68115-68186)
chr6 (27-91)||(127583-127646)
chr6 (27-99)||(545928-545999)
chr6 (27-99)||(12170400-12170471)
chr6 (52-136)||(14801074-14801158)
[»] chr4 (32 HSPs)
chr4 (26-99)||(9713831-9713905)
chr4 (43-111)||(47158139-47158207)
chr4 (27-99)||(13634039-13634110)
chr4 (24-99)||(22300768-22300844)
chr4 (27-99)||(26633785-26633856)
chr4 (48-99)||(9643304-9643355)
chr4 (29-80)||(42032640-42032691)
chr4 (27-97)||(2520703-2520772)
chr4 (67-129)||(28857272-28857334)
chr4 (43-93)||(51888346-51888396)
chr4 (52-97)||(4937757-4937802)
chr4 (48-113)||(22038935-22039000)
chr4 (26-136)||(52944198-52944304)
chr4 (27-99)||(5119263-5119334)
chr4 (27-99)||(21686355-21686426)
chr4 (52-99)||(9634598-9634645)
chr4 (48-99)||(22558598-22558649)
chr4 (43-98)||(29961054-29961109)
chr4 (27-90)||(33920984-33921046)
chr4 (24-74)||(33332685-33332735)
chr4 (43-93)||(47320531-47320581)
chr4 (54-111)||(31359893-31359950)
chr4 (26-133)||(36161603-36161705)
chr4 (53-98)||(37188694-37188739)
chr4 (54-111)||(38166373-38166430)
chr4 (53-98)||(52978749-52978794)
chr4 (27-99)||(4142869-4142939)
chr4 (27-95)||(19853626-19853693)
chr4 (27-99)||(22611107-22611178)
chr4 (67-99)||(33332756-33332788)
chr4 (43-99)||(35348229-35348284)
chr4 (57-133)||(36204525-36204601)
[»] scaffold0088 (1 HSPs)
scaffold0088 (27-99)||(50690-50761)
[»] scaffold0017 (1 HSPs)
scaffold0017 (27-99)||(32861-32933)
[»] scaffold0136 (2 HSPs)
scaffold0136 (27-111)||(10156-10238)
scaffold0136 (43-99)||(37950-38006)
[»] scaffold0445 (1 HSPs)
scaffold0445 (27-99)||(1247-1319)
[»] scaffold0262 (1 HSPs)
scaffold0262 (26-99)||(1932-2003)
[»] scaffold0039 (1 HSPs)
scaffold0039 (26-99)||(93003-93079)
[»] scaffold0603 (1 HSPs)
scaffold0603 (43-99)||(7619-7675)
[»] scaffold0127 (1 HSPs)
scaffold0127 (43-99)||(15395-15451)


Alignment Details
Target: chr8 (Bit Score: 171; Significance: 1e-91; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 24 - 290
Target Start/End: Complemental strand, 3240357 - 3240090
Alignment:
Q  24 cacagacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaaggaaatgaaaaaaga-atacggatg 122  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | || | ||||    
T  3240357 cacagacgacgaaatcacgaaaaaacacaaaagaaaacacttgatatatgtggaaatcacttatttagattgaaaggaaatgaaaaaaaagatgcagatg 3240258  T
Q  123 ggtgattctagatcnnnnnnntgatctaaaactgcccctcctcaacgactgaaagagaaagaaaacttagagagaaattgttggtaaagaattgtagaga 222  Q
    |||||||||||||        ||| ||||||   ||||||||||||||| | ||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  3240257 ggtgattctagataaaaaaaatgacctaaaatcacccctcctcaacgaccggaagagaaagaaaacttagagaaaaattcttggtaaagaattgtagaga 3240158  T
Q  223 gctgtgatgaatgcttacgttcaaattttaaatgcaaatgcattttttcagttgttgtatgttagtga 290  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3240157 gctgtgttgattgcttacgttcaaattttaaatgcaaatgcattttttcagttgttgtatgttagtga 3240090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 21237752 - 21237702
Alignment:
Q  48 acacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaa 98  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  21237752 acacaaaggaaaacacttgatatatttggaaatcacttatttagattgaaa 21237702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 14585676 - 14585605
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||||||||||||| ||||| |||| |||||||| ||||||| ||| || |||||||||||||||||||||||    
T  14585676 agacgacgaaatcaagaaaaaacacgaaagaaaa-acttgatgtatgtgaaaatcacttatttagattgaaag 14585605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 18890818 - 18890889
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||||||||||||| ||||| ||||||||||||| |||||||  || || |||||||||||||||||||||||    
T  18890818 agacgacgaaatcacgaaaaaacacaaaagaaaa-acttgatgcatgtgaaaatcacttatttagattgaaag 18890889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 23230620 - 23230550
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||  ||||  |||||||||||| |||||||| ||||| ||| |||||||||||||||||||    
T  23230620 agacgacgaaatcacaaaaa--cacaaaagaaaaaacttgatagatatgaaaaccacttatttagattgaaag 23230550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 113
Target Start/End: Original strand, 24186786 - 24186858
Alignment:
Q  43 aaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaaggaa--atgaaaaaaga 113  Q
    |||| ||||||||| ||| |||||||||||||| |||||||||||||||||| |||| ||  |||||||||||    
T  24186786 aaaacacacaaaagcaaaaacttgatatatatgaaaatcacttatttagatttaaagaaaagatgaaaaaaga 24186858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 43 - 111
Target Start/End: Original strand, 36948565 - 36948633
Alignment:
Q  43 aaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaaggaaatgaaaaaa 111  Q
    |||| ||||||||| ||| | |||||||||||| ||| ||||||||||||||||||| |||||| ||||    
T  36948565 aaaaaacacaaaaggaaaaatttgatatatatgaaaaccacttatttagattgaaagaaaatgagaaaa 36948633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 8443649 - 8443704
Alignment:
Q  43 aaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||| |||||||||||||| || ||||||| |||||||||||||||||||| |||||    
T  8443649 aaaaaacacaaaagaaaac-ctggatatatgtggaaatcacttatttagatcgaaag 8443704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 98
Target Start/End: Complemental strand, 8826187 - 8826116
Alignment:
Q  26 cagacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaa 98  Q
    ||||||||||||||| ||||| | ||||||||||| ||||||||| | |  ||||||||||||||||| ||||    
T  8826187 cagacgacgaaatcacgaaaaaa-acaaaagaaaaaacttgatatgtgtaaaaatcacttatttagatcgaaa 8826116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 24099369 - 24099446
Alignment:
Q  26 cagacgacgaaatcatgaa----aatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||| |||    || ||| ||||||||||||||||| ||| ||||||||||||||||| || |||||    
T  24099369 cagacgacgaaatcacgaagaataaaacaaaaaagaaaacacttgatctatgtggaaatcacttatttaaatcgaaag 24099446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 41896487 - 41896416
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||||| ||||||| ||||| |||| |||||||| |||||||  || || |||||||||||||||||||||||    
T  41896487 agacgatgaaatcacgaaaaaacacgaaagaaaa-acttgatggatgtgaaaatcacttatttagattgaaag 41896416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 60 - 99
Target Start/End: Original strand, 43834144 - 43834183
Alignment:
Q  60 acacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||| |||| |||||||||||||||||||||    
T  43834144 acacttgatatatgtggatatcacttatttagattgaaag 43834183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 1239531 - 1239581
Alignment:
Q  43 aaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagat 93  Q
    |||| |||||||||||||||| |||||| | || |||||||||||||||||    
T  1239531 aaaaaacacaaaagaaaacacctgatatttgtgaaaatcacttatttagat 1239581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 105
Target Start/End: Original strand, 27498491 - 27498553
Alignment:
Q  43 aaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaaggaaatg 105  Q
    |||||||| ||||| ||| ||||||||||| |  |||||||||||||| |||||||| |||||    
T  27498491 aaaatacataaaaggaaaaacttgatatatgtaaaaatcacttatttaaattgaaagaaaatg 27498553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 20559880 - 20559929
Alignment:
Q  50 acaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||| ||| |||||||| || || |||||||||||||||||||||||    
T  20559880 acaaaaggaaaaacttgatagatgtgaaaatcacttatttagattgaaag 20559929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 20571442 - 20571491
Alignment:
Q  50 acaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||| ||| |||||||| || || |||||||||||||||||||||||    
T  20571442 acaaaaggaaaaacttgatagatgtgaaaatcacttatttagattgaaag 20571491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 98
Target Start/End: Original strand, 26469338 - 26469379
Alignment:
Q  57 aaaacacttgatatatatggaaatcacttatttagattgaaa 98  Q
    |||| ||||||||||| || ||||||||||||||||||||||    
T  26469338 aaaaaacttgatatatgtgaaaatcacttatttagattgaaa 26469379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 40619200 - 40619253
Alignment:
Q  43 aaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattga 96  Q
    |||| ||||||||  ||| ||||||||||| || ||||||||||||||||||||    
T  40619200 aaaaaacacaaaaagaaaaacttgatatatgtgaaaatcacttatttagattga 40619253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 7883368 - 7883423
Alignment:
Q  43 aaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||| ||||||||||||| |||||||| || || ||| |||||||||||||||||||    
T  7883368 aaaaaacacaaaagaaaa-acttgatagatgtgaaaaccacttatttagattgaaag 7883423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 93
Target Start/End: Complemental strand, 15344261 - 15344217
Alignment:
Q  49 cacaaaagaaaacacttgatatatatggaaatcacttatttagat 93  Q
    ||||||||||||| |||||||| | || |||||||||||||||||    
T  15344261 cacaaaagaaaacgcttgatatttgtgaaaatcacttatttagat 15344217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 93
Target Start/End: Complemental strand, 15433326 - 15433282
Alignment:
Q  49 cacaaaagaaaacacttgatatatatggaaatcacttatttagat 93  Q
    ||||||||||||| |||||||| | || |||||||||||||||||    
T  15433326 cacaaaagaaaacgcttgatatttgtgaaaatcacttatttagat 15433282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 93
Target Start/End: Complemental strand, 15524630 - 15524586
Alignment:
Q  49 cacaaaagaaaacacttgatatatatggaaatcacttatttagat 93  Q
    ||||||||||||| |||||||| | || |||||||||||||||||    
T  15524630 cacaaaagaaaacgcttgatatttgtgaaaatcacttatttagat 15524586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 20553373 - 20553429
Alignment:
Q  43 aaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||| ||||||||| ||| |||| ||| || || |||||||||||||||||||||||    
T  20553373 aaaaaacacaaaaggaaaaacttcatagatgtgaaaatcacttatttagattgaaag 20553429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 40211432 - 40211488
Alignment:
Q  43 aaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||| ||||||||||||| |||||||| || || ||| | |||||||||||||||||    
T  40211432 aaaaaacacaaaagaaaatacttgatagatgtgaaaaccgcttatttagattgaaag 40211488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 5e-32; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 27 - 198
Target Start/End: Original strand, 12648038 - 12648208
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaaggaaa-tgaaaaaagaatacggatgggt 125  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||  |||||||| ||  ||| ||||    
T  12648038 agacgatgaaatcacgaaaatacacaaaagaaaacacttgatatatgtggaaatcacttatttagattgaaagaaaagagaaaaaag-atgtggaggggt 12648136  T
Q  126 gattctagatcnnnnnnntgatctaaaactgcccctcctcaacgactgaaagagaaagaaaacttagagagaa 198  Q
    |||||||| ||       ||| |||||||  |||||||||||||| | |||||||||||||||||| ||||||    
T  12648137 gattctaggtc-aaaaaatgacctaaaaccacccctcctcaacgagtaaaagagaaagaaaacttaaagagaa 12648208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 43397234 - 43397320
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaaggaaatgaaaaaaga 113  Q
    |||||||||||||| ||||| ||||||||||||| ||||||||||| || ||| ||||||||||||||||||| ||| | |||||||    
T  43397234 agacgacgaaatcacgaaaaaacacaaaagaaaaaacttgatatatgtgaaaaccacttatttagattgaaagaaaagggaaaaaga 43397320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 191
Target Start/End: Original strand, 29574747 - 29574910
Alignment:
Q  28 gacgacgaaatcatgaaa--atacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaaggaaat-gaaaaaagaatacggatggg 124  Q
    ||||||||||||| ||||  | |||||||| |||||||||||||||| |||||||||||||||||||||||||| |||| |||||||| || |  | |||    
T  29574747 gacgacgaaatcacgaaacaaaacacaaaa-aaaacacttgatatatgtggaaatcacttatttagattgaaagaaaatggaaaaaaggatgcaca-ggg 29574844  T
Q  125 tgattctagatcnnnnnnntgatctaaaactgcccctcctcaacgactgaaagagaaagaaaactta 191  Q
    ||||||||| ||       |||||||||||  ||||||||| |||| ||||||||||| ||||||||    
T  29574845 tgattctaggtc-aaaaaatgatctaaaaccacccctcctcgacgagtgaaagagaaataaaactta 29574910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 24461421 - 24461351
Alignment:
Q  28 gacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaa 98  Q
    ||||||| ||||| | ||| |||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  24461421 gacgacggaatcacgtaaaaacacaaaaaaaaacacttgatatatgtggaaatcacttatttagattgaaa 24461351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 36691859 - 36691788
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||||||||||||| ||||| ||||||||||||| ||||||||||| | |||| |||||||||||||||||||    
T  36691859 agacgacgaaatcacgaaaaaacacaaaagaaaaaacttgatatatgt-gaaaccacttatttagattgaaag 36691788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 3308923 - 3308853
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaa 98  Q
    |||||||||||||| ||||| |||| |||||||| ||||||| ||| || ||||||||||||||||||||||    
T  3308923 agacgacgaaatcacgaaaaaacacgaaagaaaa-acttgatgtatgtgaaaatcacttatttagattgaaa 3308853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 4904261 - 4904330
Alignment:
Q  28 gacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaa 98  Q
    |||||||||||||  |||| ||||||||||||| ||||||||||| || ||| ||||||||||||||||||    
T  4904261 gacgacgaaatcacaaaaa-acacaaaagaaaaaacttgatatatgtgaaaaccacttatttagattgaaa 4904330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 6358990 - 6359063
Alignment:
Q  26 cagacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||||||| |||||| ||||| ||||||| ||||| ||||||||||| | |||| |||||||||| ||||||||    
T  6358990 cagacgacaaaatcacgaaaaaacacaaaggaaaaaacttgatatatgtagaaaacacttatttaaattgaaag 6359063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 111
Target Start/End: Original strand, 19596013 - 19596073
Alignment:
Q  50 acaaaagaaaacacttgatatatatggaaatcacttatttagattgaaaggaaatgaaaaaa 111  Q
    |||||| |||||||||||||||| || |||||||||||||| ||||||| ||||||||||||    
T  19596013 acaaaataaaacacttgatatatgtgaaaatcacttatttacattgaaa-gaaatgaaaaaa 19596073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 11985345 - 11985416
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||  |||| ||||||||||||| ||||||||||| || ||| |||||||||| ||||||||    
T  11985345 agacgacgaaatcac-aaaacacacaaaagaaaaaacttgatatatgtgaaaaccacttatttaaattgaaag 11985416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 29279685 - 29279756
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||  |||| ||||||||| ||| ||||||||||| || ||| |||||||||||||||||||    
T  29279685 agacgacgaaatcacaaaaa-acacaaaaggaaaaacttgatatatgtgaaaaccacttatttagattgaaag 29279756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 14955482 - 14955436
Alignment:
Q  53 aaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||||||| ||||||| ||| ||||||||||||||||||||||||||    
T  14955482 aaagaaaaaacttgatgtatgtggaaatcacttatttagattgaaag 14955436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 31788442 - 31788364
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaaggaaatg 105  Q
    |||||||||||| |  |||| ||||||||| ||  |||||||| || || ||||||||||||||||||||||| |||||    
T  31788442 agacgacgaaattacaaaaaaacacaaaaggaacaacttgatagatgtgaaaatcacttatttagattgaaagaaaatg 31788364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 99
Target Start/End: Complemental strand, 14423303 - 14423236
Alignment:
Q  31 gacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||||||||| ||||| | ||| ||||||| ||||||||||| |||||  |||||||||||||||||||    
T  14423303 gacgaaatcaagaaaaaaaacacaagaaaa-acttgatatatgtggaacccacttatttagattgaaag 14423236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 32448736 - 32448808
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||  |||| |||||||| ||||| ||||||||   || ||||||||||||||||| |||||    
T  32448736 agacgacgaaatcacaaaaaaacacaaaataaaacgcttgatattggtgaaaatcacttatttagatcgaaag 32448808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 38445151 - 38445080
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||  |||| ||||||||||||| |||||||| || || ||| |||||||||| ||||||||    
T  38445151 agacgacgaaatcacaaaaa-acacaaaagaaaaaacttgatagatgtgaaaaccacttatttatattgaaag 38445080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 48 - 99
Target Start/End: Original strand, 31128914 - 31128965
Alignment:
Q  48 acacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||| ||| ||||||||||| || ||| |||||||||||||||||||    
T  31128914 acacaaaaggaaaaacttgatatatgtgaaaaccacttatttagattgaaag 31128965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 199
Target Start/End: Original strand, 18107983 - 18108021
Alignment:
Q  161 tcctcaacgactgaaagagaaagaaaacttagagagaaa 199  Q
    ||||||| || ||||||||||||||||||||||||||||    
T  18107983 tcctcaatgaatgaaagagaaagaaaacttagagagaaa 18108021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 9169373 - 9169443
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||  ||||  |||||||| ||| |||||||| || || ||| |||||||||||||||||||    
T  9169373 agacgacgaaatcacaaaaa--cacaaaaggaaaaacttgatagatgtgaaaaccacttatttagattgaaag 9169443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 16261328 - 16261268
Alignment:
Q  48 acacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaaggaaatgaaaa 109  Q
    ||||||||||| | |||| | |||| |||||| |||||||||||||||||| ||||||||||    
T  16261328 acacaaaagaataaactttaaatatgtggaaaccacttatttagattgaaa-gaaatgaaaa 16261268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 4041724 - 4041780
Alignment:
Q  43 aaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||| ||||||||| ||| |||||||| || || ||| |||||||||||||||||||    
T  4041724 aaaaaacacaaaaggaaaaacttgatagatgtgaaaaccacttatttagattgaaag 4041780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 4099073 - 4099017
Alignment:
Q  43 aaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||| ||||||||| ||| |||||||| || || ||| |||||||||||||||||||    
T  4099073 aaaaaacacaaaaggaaaaacttgatagatgtgaaaaccacttatttagattgaaag 4099017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 31210722 - 31210781
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttat 87  Q
    ||||||||||||||| |||| ||||||||||||| |||||||| || || ||| |||||||    
T  31210722 agacgacgaaatcataaaaa-acacaaaagaaaaaacttgatagatgtgaaaaccacttat 31210781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 26 - 198
Target Start/End: Original strand, 58192 - 58363
Alignment:
Q  26 cagacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaaggaaatgaaaaaagaatacggatgggt 125  Q
    ||||||| ||||||| |||||  |||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||| || | || ||||    
T  58192 cagacgatgaaatcacgaaaaagcacaaaagaaaacacttgatatatgtggaaatcacttatttagattgaaagaaaaggaaaaaaggatgcagaggggt 58291  T
Q  126 gattctagatcnnnnnnntgatctaaaactgcccctcctcaacgactgaaagagaaagaaaacttagagagaa 198  Q
    |||| ||| ||       ||| |||||||  ||||||||| |||| ||||||| || ||||||||||||||||    
T  58292 gattttaggtc-aaaaaatgacctaaaaccacccctcctcgacgagtgaaagaaaacgaaaacttagagagaa 58363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 3e-27; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 26 - 198
Target Start/End: Original strand, 50194396 - 50194567
Alignment:
Q  26 cagacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaaggaaatgaaaaaagaatacggatgggt 125  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||  || | |||||| || | ||  |||    
T  50194396 cagacgacgaaatcacgaaaaaacacaaaagaaaacacttgatatatgtggaaatcacttatttagattgaaagagaagggaaaaaggatgcagagaggt 50194495  T
Q  126 gattctagatcnnnnnnntgatctaaaactgcccctcctcaacgactgaaagagaaagaaaacttagagagaa 198  Q
    |||| ||| ||       |||||||||||  | ||| ||| |||| |||||||||| ||||||||||||||||    
T  50194496 gattttaggtc-aaaaaatgatctaaaaccactccttctcgacgagtgaaagagaacgaaaacttagagagaa 50194567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 29922029 - 29921956
Alignment:
Q  26 cagacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  29922029 cagacgacgaaatcacgaaaaaacacaaaagaaaacacttgatatatgtggaaatcacttatttagattgaaag 29921956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 29971182 - 29971109
Alignment:
Q  26 cagacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  29971182 cagacgacgaaatcacgaaaaaacacaaaagaaaacacttgatatatgtggaaatcacttatttagattgaaag 29971109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 12947410 - 12947464
Alignment:
Q  43 aaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaa 97  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12947410 aaaaaacacaaaagaaaacacttgatatatgtggaaatcacttatttagattgaa 12947464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 53508197 - 53508124
Alignment:
Q  26 cagacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||| ||||| ||||| ||||||| ||||||||||| || |||||||||||||| ||||||||    
T  53508197 cagacgacgaaatcacgaaaaaacacagaagaaaaaacttgatatatgtgaaaatcacttatttatattgaaag 53508124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 35175376 - 35175304
Alignment:
Q  26 cagacgacgaaatcatgaaaata-cacaaaagaaaacacttgatatatatggaaatcacttatttagattgaa 97  Q
    ||||||||||||| | ||||| | |||||||||||||||||||||||| |||||||||||| |||||||||||    
T  35175376 cagacgacgaaattacgaaaaaaacacaaaagaaaacacttgatatatgtggaaatcacttgtttagattgaa 35175304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 43 - 111
Target Start/End: Complemental strand, 33579827 - 33579759
Alignment:
Q  43 aaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaaggaaatgaaaaaa 111  Q
    |||| ||||||||||||| ||| ||||||| || ||||||||||||||||||||||| ||||| |||||    
T  33579827 aaaaaacacaaaagaaaaaactagatatatgtgaaaatcacttatttagattgaaagaaaatggaaaaa 33579759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 36461545 - 36461616
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||  |||| ||||||||||||| |||||||| || || |||||||||||||||||||||||    
T  36461545 agacgacgaaatcacaaaaa-acacaaaagaaaaaacttgatagatgtgaaaatcacttatttagattgaaag 36461616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 42460720 - 42460650
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||||||||||||| ||||| |||| |||||||| ||||||| ||| ||||||||||||||||||||||||||    
T  42460720 agacgacgaaatcacgaaaa-acacgaaagaaaa-acttgatgtatgtggaaatcacttatttagattgaaag 42460650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 47896125 - 47896055
Alignment:
Q  28 gacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||||||||||||  |||| ||||||||||||| ||||||||||| || ||| |||||||||||||||||||    
T  47896125 gacgacgaaatcacaaaaa-acacaaaagaaaaaacttgatatatgtgaaaaccacttatttagattgaaag 47896055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 44804983 - 44804934
Alignment:
Q  43 aaaatacacaaaagaaaacacttgatatatatggaaatcacttatttaga 92  Q
    |||| ||||| ||||||||||||||||||| |||||||||||||||||||    
T  44804983 aaaaaacacagaagaaaacacttgatatatgtggaaatcacttatttaga 44804934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 20987913 - 20987984
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||  |||| ||||||||||||| ||| ||||||| || |||||||||||||| ||||||||    
T  20987913 agacgacgaaatcacaaaaa-acacaaaagaaaaaactcgatatatttgaaaatcacttatttaaattgaaag 20987984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 52116121 - 52116187
Alignment:
Q  27 agacgacgaaatcatgaaaata---cacaaaagaaaacacttgatatatatggaaatcacttattta 90  Q
    |||||||||||||||||||| |   |||||||||||| ||||||||||| || ||||||||||||||    
T  52116121 agacgacgaaatcatgaaaaaaaaacacaaaagaaaaaacttgatatatgtgaaaatcacttattta 52116187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 32 - 99
Target Start/End: Complemental strand, 22290908 - 22290841
Alignment:
Q  32 acgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||| ||||||||| ||| | || |||||| || |||||||||||||||||| ||||    
T  22290908 acgaaatcatgaaaaaacacaaaaggaaaaatttaatatatgtgaaaatcacttatttagattaaaag 22290841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 198
Target Start/End: Complemental strand, 29921898 - 29921857
Alignment:
Q  157 cccctcctcaacgactgaaagagaaagaaaacttagagagaa 198  Q
    ||||||||| |||| |||||||||||||||||||||||||||    
T  29921898 cccctcctcgacgaatgaaagagaaagaaaacttagagagaa 29921857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 198
Target Start/End: Complemental strand, 29971051 - 29971010
Alignment:
Q  157 cccctcctcaacgactgaaagagaaagaaaacttagagagaa 198  Q
    ||||||||| |||| |||||||||||||||||||||||||||    
T  29971051 cccctcctcgacgaatgaaagagaaagaaaacttagagagaa 29971010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 43488704 - 43488775
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||  |||| ||||||| ||||| |||||||| || || ||| |||||||||||||||||||    
T  43488704 agacgacgaaatcacaaaaa-acacaaatgaaaaaacttgatagatgtgaaaaccacttatttagattgaaag 43488775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 16235393 - 16235307
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaa-tcacttatttagattgaaaggaaatgaaaaaaga 113  Q
    |||||| ||||||| ||||| |||| |||||||| ||||||| ||| || ||| |||||||||||||||||||  ||| |||||||||    
T  16235393 agacgatgaaatcacgaaaaaacacgaaagaaaa-acttgatgtatgtgaaaaatcacttatttagattgaaaaaaaaggaaaaaaga 16235307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 99
Target Start/End: Complemental strand, 51487073 - 51487004
Alignment:
Q  31 gacgaaatcatgaaaatacacaaaagaaaacactt-gatatatatggaaatcacttatttagattgaaag 99  Q
    |||||||||| ||||| ||||  ||||||| |||| ||| |||||  |||||||||||||||||||||||    
T  51487073 gacgaaatcacgaaaaaacacgcaagaaaaaactttgatgtatataaaaatcacttatttagattgaaag 51487004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 99
Target Start/End: Complemental strand, 54148941 - 54148892
Alignment:
Q  50 acaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||| |||||||| || || ||| |||||||||||||||||||    
T  54148941 acaaaagaaaaaacttgatagatgtgaaaaccacttatttagattgaaag 54148892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 67 - 99
Target Start/End: Original strand, 7887562 - 7887594
Alignment:
Q  67 atatatatggaaatcacttatttagattgaaag 99  Q
    ||||| |||||||||||||||||||||||||||    
T  7887562 atatacatggaaatcacttatttagattgaaag 7887594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 9797643 - 9797714
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||  |||| ||||||||| | | |||||||| || || ||| |||||||||||||||||||    
T  9797643 agacgacgaaatcacaaaaa-acacaaaagtagaaacttgatagatgtgaaaaccacttatttagattgaaag 9797714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 21289935 - 21290006
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||  |||| |||| |||||||| ||||||| ||| |  ||||||||||||| |||||||||    
T  21289935 agacgacgaaatcacaaaaaaacacgaaagaaaa-acttgatgtatgttaaaatcacttatttggattgaaag 21290006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 52923246 - 52923302
Alignment:
Q  43 aaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||| ||||||||| ||| |||||||| || || ||| |||||||||||||||||||    
T  52923246 aaaagacacaaaaggaaaaacttgatagatgtgaaaaccacttatttagattgaaag 52923302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 3e-24; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 10332668 - 10332737
Alignment:
Q  30 cgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10332668 cgacaaaatcacgaaaaaacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 10332737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 8985062 - 8985132
Alignment:
Q  43 aaaatacacaaaagaaaacacttgatatatatggaaatcactta-tttagattgaaaggaaatgaaaaaag 112  Q
    |||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||| ||||||    
T  8985062 aaaaaacacaaaagaaaacacttgatatatgtggaaatcacttattttagattgaaagaaaatggaaaaag 8985132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 2979427 - 2979498
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||||||||||||| ||||| |||| |||||||| ||||||| ||| || |||||||||||||||||||||||    
T  2979427 agacgacgaaatcacgaaaaaacacgaaagaaaa-acttgatgtatgtgaaaatcacttatttagattgaaag 2979498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 14726575 - 14726647
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||  |||| ||||| ||||||| |||||||||||||| ||| |||||| ||||||||||||    
T  14726575 agacgacgaaatcacaaaaaaacacataagaaaaaacttgatatatatgaaaaccacttagttagattgaaag 14726647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 11977049 - 11977122
Alignment:
Q  27 agacgacgaaatcatgaaaata-cacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||  |||| | |||||||||||| ||||||||||| || ||| |||||||||||||||||||    
T  11977049 agacgacgaaatcacaaaaaaaacacaaaagaaaaaacttgatatatgtgaaaaccacttatttagattgaaag 11977122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 6216873 - 6216802
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||  |||| ||||||||| ||| ||||||||||| || ||| |||||||||||||||||||    
T  6216873 agacgacgaaatcacaaaaa-acacaaaaggaaaaacttgatatatgtgaaaaccacttatttagattgaaag 6216802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 8096611 - 8096683
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||||| |||||||   ||| ||||||||||||| ||||||||||| || ||| |||||||||||||||||||    
T  8096611 agacgatgaaatcacacaaaaacacaaaagaaaaaacttgatatatgtgaaaaccacttatttagattgaaag 8096683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 24229902 - 24229970
Alignment:
Q  31 gacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||  |||| ||||||||||||  |||||||| || || |||||||||||||||||||||||    
T  24229902 gacgaaatcacaaaaaaacacaaaagaaacaacttgatagatgtgaaaatcacttatttagattgaaag 24229970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 28541027 - 28541098
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||||| ||||||| ||||| |||| |||||||| ||||||| ||| || |||||||||||||||||||||||    
T  28541027 agacgatgaaatcacgaaaaaacacgaaagaaaa-acttgatgtatgtgaaaatcacttatttagattgaaag 28541098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 39567269 - 39567198
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||| |||| ||||| |||| |||||||| ||||||| ||| || |||||||||||||||||||||||    
T  39567269 agacgacgagatcacgaaaaaacacgaaagaaaa-acttgatgtatgtgaaaatcacttatttagattgaaag 39567198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 13007203 - 13007126
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaaggaaatg 105  Q
    ||||||||||||||  |||| ||||||||| ||| |||||||| || || ||| ||||||||||||||||||| |||||    
T  13007203 agacgacgaaatcacaaaaa-acacaaaaggaaaaacttgatagatgtgaaaaccacttatttagattgaaagaaaatg 13007126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 15571460 - 15571389
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||  |||||  ||||||| ||| ||||||||||| || ||| |||||||||||||||||||    
T  15571460 agacgacgaaatcacaaaaatt-acaaaaggaaaaacttgatatatgtgaaaaccacttatttagattgaaag 15571389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 19103588 - 19103659
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||||||||||||| ||||| |||  |||||||| ||||||| ||| || ||||||||||||||||| |||||    
T  19103588 agacgacgaaatcacgaaaaaacatgaaagaaaa-acttgatgtatgtgaaaatcacttatttagatcgaaag 19103659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 99
Target Start/End: Complemental strand, 7036181 - 7036131
Alignment:
Q  49 cacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||||||||||| | ||||||||| || ||| |||||||||||||||||||    
T  7036181 cacaaaagaaaaaaattgatatatgtgaaaaccacttatttagattgaaag 7036131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 113
Target Start/End: Original strand, 8088342 - 8088412
Alignment:
Q  43 aaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaaggaaatgaaaaaaga 113  Q
    |||| ||||||||||||||  ||||||| | || ||||||||||||||||| ||||| ||  |||||||||    
T  8088342 aaaaaacacaaaagaaaacgtttgatatttgtgaaaatcacttatttagatcgaaagaaagagaaaaaaga 8088412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 9113839 - 9113916
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaaggaaatg 105  Q
    ||||||||||||||  |||| ||||||||| ||| |||||||| || || ||| |||||||||||||| |||| |||||    
T  9113839 agacgacgaaatcacaaaaa-acacaaaaggaaaaacttgatagatgtgaaaaccacttatttagattaaaagaaaatg 9113916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 26878195 - 26878264
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||  ||||   ||||||||||| ||||||| ||| || ||| |||||||||||||||||||    
T  26878195 agacgacgaaatcacaaaaa---acaaaagaaaaaacttgatttatgtgaaaaccacttatttagattgaaag 26878264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 198
Target Start/End: Original strand, 8985180 - 8985221
Alignment:
Q  157 cccctcctcaacgactgaaagagaaagaaaacttagagagaa 198  Q
    |||||||| ||||| |||||||||| ||||||||||||||||    
T  8985180 cccctcctaaacgagtgaaagagaacgaaaacttagagagaa 8985221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 34945395 - 34945325
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||  ||||  |||||||| ||| |||||||| || || ||| |||||||||||||||||||    
T  34945395 agacgacgaaatcacaaaaa--cacaaaaggaaaaacttgatagatgtgaaaaccacttatttagattgaaag 34945325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 38597771 - 38597700
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||  ||||  |||||||| ||| |||||||| || || |||||||||||||| ||||||||    
T  38597771 agacgacgaaatcacaaaaag-cacaaaaggaaaaacttgatagatgtgaaaatcacttatttaaattgaaag 38597700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 113
Target Start/End: Complemental strand, 41749295 - 41749211
Alignment:
Q  29 acgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaaggaaatgaaaaaaga 113  Q
    |||| |||||||||||||  | ||||| |||| ||||||||||| || |||  ||||||||||||| |||| ||  |||||||||    
T  41749295 acgatgaaatcatgaaaaagcgcaaaataaaaaacttgatatatgtgaaaacaacttatttagattaaaagaaatggaaaaaaga 41749211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 2e-22; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 26 - 112
Target Start/End: Complemental strand, 47132879 - 47132793
Alignment:
Q  26 cagacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaaggaaatgaaaaaag 112  Q
    ||||||||||||||| |||||  |||||||||||||||||||||||| | |||||||||||||||||||||||| ||| | ||||||    
T  47132879 cagacgacgaaatcacgaaaaagcacaaaagaaaacacttgatatatgtagaaatcacttatttagattgaaagaaaagggaaaaag 47132793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 16161809 - 16161739
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaa 98  Q
    |||||||||||||| ||||| ||||||||||||| ||||||| ||| |||||||||||||||||||||||||    
T  16161809 agacgacgaaatcacgaaaaaacacaaaagaaaa-acttgatgtatgtggaaatcacttatttagattgaaa 16161739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 23291756 - 23291828
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||  |||| ||||||||||||| ||||||||||| || ||| |||||||||||||||||||    
T  23291756 agacgacgaaatcacaaaaaaacacaaaagaaaaaacttgatatatgtgaaaaccacttatttagattgaaag 23291828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 44543248 - 44543163
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaaggaaatgaaaaaaga 113  Q
    ||||||||||||||  |||| ||||||||||||||||||||||| | || ||||||||||||||||| ||||| ||  |||||||||    
T  44543248 agacgacgaaatcacaaaaa-acacaaaagaaaacacttgatatttgtgaaaatcacttatttagatcgaaagaaagggaaaaaaga 44543163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 9341703 - 9341630
Alignment:
Q  26 cagacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||| | ||| ||||||||||||||||||||||||| || ||||  |||||||| ||||||||    
T  9341703 cagacgacgaaatcacgtaaaaacacaaaagaaaacacttgatatatgtgaaaatttcttatttatattgaaag 9341630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 1602093 - 1602022
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||||||||||||||||||| |||| ||||| || ||||||||||||| |||| ||||||||||||| |||||    
T  1602093 agacgacgaaatcatgaaaagacacgaaagataa-acttgatatatatagaaaccacttatttagatcgaaag 1602022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 1742259 - 1742187
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||  |||| | ||||||||||| ||||||||||| || ||| |||||||||||||||||||    
T  1742259 agacgacgaaatcacaaaaaaatacaaaagaaaaaacttgatatatgtgaaaaccacttatttagattgaaag 1742187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 12635124 - 12635076
Alignment:
Q  48 acacaaaagaaaacacttgatatatatggaaatcacttatttagattga 96  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||    
T  12635124 acacaaaagaaaacacttgatatatgtgaaaatcacttatttagattga 12635076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 35 - 99
Target Start/End: Original strand, 37720243 - 37720306
Alignment:
Q  35 aaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||||| ||||| ||||||||||||| ||||||| ||| ||||||||||||||||||||||||||    
T  37720243 aaatcacgaaaaaacacaaaagaaaa-acttgatgtatgtggaaatcacttatttagattgaaag 37720306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 113
Target Start/End: Complemental strand, 15492254 - 15492184
Alignment:
Q  42 gaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaaggaaatgaaaaaaga 113  Q
    ||||| ||||||||||||| ||||||||||| || |||||| ||||||||||||||| |||||| |||||||    
T  15492254 gaaaaaacacaaaagaaaaaacttgatatatgtgaaaatcatttatttagattgaaa-gaaatggaaaaaga 15492184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 13075749 - 13075821
Alignment:
Q  26 cagacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||| ||||||| ||||| ||||||||||||| |||| | |||||||  ||||||||||||||||||||||    
T  13075749 cagacgatgaaatcacgaaaaaacacaaaagaaaatactt-agatatatgtgaatcacttatttagattgaaag 13075821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 13144926 - 13144997
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||  |||| ||||||||| ||| | |||||||||||| ||| |||||||||||||||||||    
T  13144926 agacgacgaaatcaaaaaaa-acacaaaaggaaaaagttgatatatatgaaaaccacttatttagattgaaag 13144997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 21947732 - 21947803
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||  |||| ||||||||||||| |||||||| || || ||| |||||||||||||||||||    
T  21947732 agacgacgaaatcacaaaaa-acacaaaagaaaaaacttgatagatgtgaaaaccacttatttagattgaaag 21947803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 31918966 - 31918899
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattga 96  Q
    ||||||||||||||  ||||||||  |||||||| ||||||||||| || ||| ||||||||||||||||    
T  31918966 agacgacgaaatcacaaaaataca--aaagaaaaaacttgatatatgtgaaaaccacttatttagattga 31918899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 32679211 - 32679285
Alignment:
Q  26 cagacgacgaaatcatgaaaatacac-aaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||| ||||||| ||||| | || |||| |||||| ||||||||| ||||||||||||||||| ||||||||    
T  32679211 cagacgatgaaatcacgaaaaaaaaccaaaataaaacaattgatatatgtggaaatcacttatttaaattgaaag 32679285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 136
Target Start/End: Original strand, 36775838 - 36775938
Alignment:
Q  34 gaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaaggaaatgaaaaaagaatacggatgggtgattctag 133  Q
    ||||||| ||||| |||| |||||||| ||||||| ||| || |||||| |||||||||||||||| ||  |||||||| || | || ||||||||||||    
T  36775838 gaaatcacgaaaaaacacgaaagaaaa-acttgatgtatgtgaaaatcatttatttagattgaaagaaagggaaaaaag-atgcagaggggtgattctag 36775935  T
Q  134 atc 136  Q
    |||    
T  36775936 atc 36775938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 49626889 - 49626816
Alignment:
Q  27 agacgacgaaatcatgaaaata-cacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||  |||| | ||||||||||||| |||||||| | || ||||||||||||||||| |||||    
T  49626889 agacgacgaaatcacaaaaaaaacacaaaagaaaacgcttgatatttgtgaaaatcacttatttagatagaaag 49626816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 8212024 - 8212107
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaaggaaatgaaaaaa 111  Q
    ||||||||||||||  |||| |||||||||  || ||||||||||| || ||| |||||||||||||| |||| ||| |||||||    
T  8212024 agacgacgaaatcacaaaaa-acacaaaagggaaaacttgatatatgtgaaaaccacttatttagatttaaagaaaaggaaaaaa 8212107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 40163614 - 40163685
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||||||||||||||||||| ||||| |  |||| | ||||||||| ||||||||||||||||| || |||||    
T  40163614 agacgacgaaatcatgaaaaaacacagataaaaa-atttgatatatgtggaaatcacttatttatatagaaag 40163685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 48 - 99
Target Start/End: Original strand, 29738770 - 29738821
Alignment:
Q  48 acacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||| |||||||| || || ||| |||||||||||||||||||    
T  29738770 acacaaaagaaaaaacttgatagatgtgaaaaccacttatttagattgaaag 29738821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 157 - 195
Target Start/End: Original strand, 32679342 - 32679380
Alignment:
Q  157 cccctcctcaacgactgaaagagaaagaaaacttagaga 195  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  32679342 cccctcctcgacgagtgaaagagaaagaaaacttagaga 32679380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 7337792 - 7337848
Alignment:
Q  43 aaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||| ||||||||| ||| |||||||| || || ||| |||||||||||||||||||    
T  7337792 aaaaaacacaaaaggaaaaacttgatagatgtgaaaaccacttatttagattgaaag 7337848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 7e-22; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 41553554 - 41553623
Alignment:
Q  30 cgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||| ||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  41553554 cgacgaaatcacgaaaaaacacaaaagaaaacacttgatatatgtggaaatcccttatttagattgaaag 41553623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 41553899 - 41553968
Alignment:
Q  30 cgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||| ||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  41553899 cgacgaaatcacgaaaaaacacaaaagaaaacacttgatatatgtggaaatcccttatttagattgaaag 41553968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 41554244 - 41554313
Alignment:
Q  30 cgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||| ||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  41554244 cgacgaaatcacgaaaaaacacaaaagaaaacacttgatatatgtggaaatcccttatttagattgaaag 41554313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 28476197 - 28476126
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||||||||||||| ||||| ||||||||||||| ||||||| ||| || |||||||||||||||||||||||    
T  28476197 agacgacgaaatcacgaaaaaacacaaaagaaaa-acttgatgtatgtgaaaatcacttatttagattgaaag 28476126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 27 - 198
Target Start/End: Complemental strand, 22742914 - 22742745
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaaggaaatgaaaaaagaatacggatgggtg 126  Q
    |||||||||||||| ||||| | || |||||||| ||||||| ||| || ||||||||||||||||||||||| ||  | |||||  || | || |||||    
T  22742914 agacgacgaaatcacgaaaaaaaacgaaagaaaa-acttgatgtatgtgaaaatcacttatttagattgaaagaaaggggaaaaaagatgcagaggggtg 22742816  T
Q  127 attctagatcnnnnnnntgatctaaaactgcccctcctcaacgactgaaagagaaagaaaacttagagagaa 198  Q
    |||||||||        ||| ||||||   ||||||||| | || |||||||| ||||||||||||||||||    
T  22742815 attctagat-taaaaattgacctaaaatcacccctcctcgatgaatgaaagaggaagaaaacttagagagaa 22742745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 27 - 133
Target Start/End: Original strand, 24350958 - 24351063
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaaggaaatgaaaaaagaatacggatgggtg 126  Q
    ||||||||||||||  |||| |||| |||||||| ||||||| ||| || ||||||||||||||||||||||| ||  |||||||| || |  | |||||    
T  24350958 agacgacgaaatcactaaaaaacacgaaagaaaa-acttgatgtatgtgaaaatcacttatttagattgaaagaaagggaaaaaaggatgcacaggggtg 24351056  T
Q  127 attctag 133  Q
    |||||||    
T  24351057 attctag 24351063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 38051185 - 38051253
Alignment:
Q  31 gacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||||||||||||||  |||||||| |||| ||||||||||||| |||| ||| |||||||||| ||||    
T  38051185 gacgaaatcatgaaataacacaaaaaaaaaaacttgatatatattgaaaccacatatttagattaaaag 38051253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 48 - 99
Target Start/End: Original strand, 35665266 - 35665317
Alignment:
Q  48 acacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||| ||||||||| | |||||||||||||||||| |||||    
T  35665266 acacaaaagaaaacatttgatatatttcgaaatcacttatttagatcgaaag 35665317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 37837579 - 37837644
Alignment:
Q  34 gaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||||||  |||| ||||||||||||| |||| |||||| || ||| |||||||||||||||||||    
T  37837579 gaaatcacaaaaaaacacaaaagaaaaaacttaatatatgtgtaaaccacttatttagattgaaag 37837644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 48061399 - 48061329
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||  ||||  |||||||||||| |||||||| || || ||| |||||||||||||||||||    
T  48061399 agacgacgaaatcacaaaaa--cacaaaagaaaaaacttgatagatgtgaaaaccacttatttagattgaaag 48061329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 12141422 - 12141491
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaa 98  Q
    ||||||||||||||  ||||  |||||||||||| |||||||| || || ||| ||||||||||||||||||    
T  12141422 agacgacgaaatcacaaaaa--cacaaaagaaaaaacttgatagatgtgaaaaccacttatttagattgaaa 12141491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 13797046 - 13797117
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||| |||| ||||||||| ||| |||||||| || |  |||||||||||||| ||||||||    
T  13797046 agacgacgaaatcataaaaa-acacaaaaggaaaaacttgatagatgttaaaatcacttatttaaattgaaag 13797117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 30756933 - 30757004
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||  |||| ||||||||| ||| || ||||| || || |||||||||||||||||||||||    
T  30756933 agacgacgaaatcacaaaaa-acacaaaaggaaaaacatgatagatgtgaaaatcacttatttagattgaaag 30757004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 34899721 - 34899792
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||  |||| ||||||||| ||| |||||||| || || ||| |||||||||||||||||||    
T  34899721 agacgacgaaatcacaaaaa-acacaaaaggaaaaacttgatagatgtgaaaaccacttatttagattgaaag 34899792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 39171708 - 39171776
Alignment:
Q  31 gacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||  |||| ||||||||| ||| |||||||| ||||| ||| ||||||||||||| |||||    
T  39171708 gacgaaatcacaaaaaaacacaaaaggaaaaacttgatagatatgaaaaccacttatttagatcgaaag 39171776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 40993159 - 40993088
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||  |||| ||||||||| ||| |||||||| || || ||| |||||||||||||||||||    
T  40993159 agacgacgaaatcacaaaaa-acacaaaaggaaaaacttgatagatgtgaaaaccacttatttagattgaaag 40993088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 47590273 - 47590217
Alignment:
Q  43 aaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||| ||||||||| ||| ||||||||||| || ||| |||||||||||||||||||    
T  47590273 aaaaaacacaaaaggaaaaacttgatatatgtgaaaaccacttatttagattgaaag 47590217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 31 - 98
Target Start/End: Original strand, 5078513 - 5078579
Alignment:
Q  31 gacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaa 98  Q
    |||||||| | ||||| ||||||||||||| ||||||||||| |  ||||||||||||||||| ||||    
T  5078513 gacgaaattacgaaaaaacacaaaagaaaa-acttgatatatgtaaaaatcacttatttagatcgaaa 5078579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 11343777 - 11343703
Alignment:
Q  26 cagacgacgaaatcatgaaaatacacaaaagaaaacacttgatatat-atggaaatcacttatttagattgaaag 99  Q
    ||||| ||||||||| ||||| ||||||||||||| | |||||| ||  |  |||||||||||||||||||||||    
T  11343777 cagacaacgaaatcacgaaaaaacacaaaagaaaatatttgatagatgttaaaaatcacttatttagattgaaag 11343703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 19404871 - 19404952
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaaggaaatgaaaaaa 111  Q
    ||||||||||||||  |||||   |||||| ||| ||||||| ||| || ||| ||||||||||||||||||| ||| |||||||    
T  19404871 agacgacgaaatcactaaaat---caaaaggaaaaacttgatttatgtgaaaaccacttatttagattgaaagaaaaggaaaaaa 19404952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 42978587 - 42978518
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattga 96  Q
    ||||||||||||||  |||  ||||||||| ||| |||| |||||| || ||| ||||||||||||||||    
T  42978587 agacgacgaaatcacaaaagaacacaaaaggaaaaactttatatatgtgaaaaccacttatttagattga 42978518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 1749284 - 1749343
Alignment:
Q  53 aaagaaaacacttgatatatatggaaatcacttatttagattgaaaggaaatgaaaaaaga 113  Q
    |||||||| ||||||| ||| || ||||||||||||||||||||||| ||  |||||||||    
T  1749284 aaagaaaa-acttgatgtatgtgaaaatcacttatttagattgaaagaaagggaaaaaaga 1749343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 9450251 - 9450322
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||  |||| ||||||||| | | ||| |||| || || |||||||||||||||||||||||    
T  9450251 agacgacgaaatcacaaaaa-acacaaaaggagaaactagatagatgtgaaaatcacttatttagattgaaag 9450322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 98
Target Start/End: Complemental strand, 26583676 - 26583644
Alignment:
Q  66 gatatatatggaaatcacttatttagattgaaa 98  Q
    |||||||||| ||||||||||||||||||||||    
T  26583676 gatatatatgaaaatcacttatttagattgaaa 26583644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 48316926 - 48316997
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||  |||| ||||||||||||| | |||||| || || ||| |||||||||| ||||||||    
T  48316926 agacgacgaaatcacaaaaa-acacaaaagaaaaaatttgatagatgtgaaaaccacttatttaaattgaaag 48316997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 1e-20; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 26 - 113
Target Start/End: Complemental strand, 30493506 - 30493420
Alignment:
Q  26 cagacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaaggaaatgaaaaaaga 113  Q
    ||||||| ||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||  |||||||||    
T  30493506 cagacgaggaaatcacgaaaa-acacaaaagaaaacacttgatatatgtggaaatcacttatttagtttgaaagaaagggaaaaaaga 30493420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 30776641 - 30776570
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||||||||||||| ||||| ||||||||||||| ||||||| ||| ||||||| ||||||||||||||||||    
T  30776641 agacgacgaaatcacgaaaaaacacaaaagaaaa-acttgatgtatgtggaaattacttatttagattgaaag 30776570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 32191845 - 32191916
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaa 98  Q
    ||||||| |||||| ||||| | ||||||||||||||||||||||| | |||||||||||||||||| ||||    
T  32191845 agacgacaaaatcacgaaaaaatacaaaagaaaacacttgatatatgtagaaatcacttatttagatcgaaa 32191916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 11321583 - 11321659
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaaggaaat 104  Q
    ||||||||||||||| ||| |||||||||||||| |||| |||||| || ||| ||||||||||||||||||| ||||    
T  11321583 agacgacgaaatcat-aaattacacaaaagaaaaaacttaatatatgtgaaaaccacttatttagattgaaagaaaat 11321659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 52 - 113
Target Start/End: Complemental strand, 28981128 - 28981067
Alignment:
Q  52 aaaagaaaacacttgatatatatggaaatcacttatttagattgaaaggaaatgaaaaaaga 113  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||| ||  |||||||||    
T  28981128 aaaaaaaaacacttgatatatgtggaaatcacttatttagattgaaagaaagggaaaaaaga 28981067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 8102695 - 8102624
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||||||||||||| ||||| ||||||||||||| ||||||| | | || |||||||||||||||||||||||    
T  8102695 agacgacgaaatcacgaaaaaacacaaaagaaaa-acttgatgtttgtgaaaatcacttatttagattgaaag 8102624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 34018536 - 34018459
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaaggaaatg 105  Q
    ||||||||||||||  |||| ||||||||||||| ||||||||||| || ||| |||||||||| |||||||| |||||    
T  34018536 agacgacgaaatcacaaaaa-acacaaaagaaaaaacttgatatatgtgaaaaccacttatttaaattgaaagaaaatg 34018459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 98
Target Start/End: Original strand, 1933809 - 1933882
Alignment:
Q  26 cagacgacgaaatcatgaaaata-cacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaa 98  Q
    ||||||||||||||| ||||| | |||||||||||| ||||||||||| || |||| |||||||||||| ||||    
T  1933809 cagacgacgaaatcacgaaaaaaacacaaaagaaaaaacttgatatatgtgaaaataacttatttagatcgaaa 1933882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 135
Target Start/End: Complemental strand, 22571442 - 22571358
Alignment:
Q  50 acaaaagaaaacacttgatatatatggaaatcacttatttagattgaaaggaaatgaaaaaagaatacggatgggtgattctagat 135  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||  |||| | | |||||||| || | ||||| |||||||||||    
T  22571442 acaaaagaaaaaacttgatatatgtggaaatcacttatttagatcaaaagaagaggaaaaaag-atgcagatggttgattctagat 22571358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 48 - 136
Target Start/End: Original strand, 26588602 - 26588689
Alignment:
Q  48 acacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaaggaaatgaaaaaagaatacggatgggtgattctagatc 136  Q
    |||||||| |||| ||||||||||| |||||| |||||||||||||| ||| |||||| ||||| |||   ||||||||||| ||||||    
T  26588602 acacaaaaaaaaaaacttgatatatgtggaaaccacttatttagatt-aaaagaaatggaaaaaaaatgaagatgggtgattatagatc 26588689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 7976293 - 7976355
Alignment:
Q  26 cagacgacgaaatcatgaaaata-cacaaaagaaaacacttgatatatatggaaatcacttatt 88  Q
    ||||||||||||||| ||||| | ||||||||||||||||| |||||| |||||||||||||||    
T  7976293 cagacgacgaaatcacgaaaaaaacacaaaagaaaacactt-atatatgtggaaatcacttatt 7976355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 43 - 133
Target Start/End: Original strand, 3913703 - 3913794
Alignment:
Q  43 aaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaaggaaat--gaaaaaagaatacggatgggtgattctag 133  Q
    |||| ||||||||||||| |||||||| || || ||| |||||||||||||||||||  |||  |||||||| || |||| ||||||||||||    
T  3913703 aaaaaacacaaaagaaaaaacttgatagatgtgaaaaccacttatttagattgaaagagaatgggaaaaaag-atgcggaggggtgattctag 3913794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 33053282 - 33053353
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||  |||| ||||||||| ||| |||||||| || || ||| |||||||||||||||||||    
T  33053282 agacgacgaaatcacaaaaa-acacaaaaggaaaaacttgatagatgtgaaaaccacttatttagattgaaag 33053353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 1523377 - 1523310
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||||||||||||| ||||| |||    |||||| ||||||| ||| ||||||||||||||||||||||||||    
T  1523377 agacgacgaaatcacgaaaaaaca----agaaaa-acttgatgtatgtggaaatcacttatttagattgaaag 1523310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 68115 - 68186
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||  |||| ||||||||| ||| |||||||| || || ||| |||||||||||||| ||||    
T  68115 agacgacgaaatcacaaaaa-acacaaaaggaaaaacttgatagatgtgaaaaccacttatttagattaaaag 68186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 127646 - 127583
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttag 91  Q
    ||||||||||||||  |||| ||||||||| ||| ||||||||||| || ||| |||||||||||    
T  127646 agacgacgaaatcacaaaaa-acacaaaaggaaaaacttgatatatgtgaaaaccacttatttag 127583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 545999 - 545928
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||||| ||||||| ||||| |||| |||||||| ||||||| ||| || ||||  |||||||||||||||||    
T  545999 agacgatgaaatcacgaaaaaacacgaaagaaaa-acttgatgtatgtgaaaattgcttatttagattgaaag 545928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 12170471 - 12170400
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||  |||| ||||||||  ||| |||||||| || || ||| |||||||||||||||||||    
T  12170471 agacgacgaaatcacaaaaa-acacaaaacgaaaaacttgatagatgtgaaaaccacttatttagattgaaag 12170400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 136
Target Start/End: Complemental strand, 14801158 - 14801074
Alignment:
Q  52 aaaagaaaacacttgatatatatggaaatcacttatttagattgaaaggaaatgaaaaaagaatacggatgggtgattctagatc 136  Q
    |||| |||| ||||||| ||| || |||| |||||||||||||||||| ||  | |||||  |||| || |||||||||||||||    
T  14801158 aaaaaaaaaaacttgatgtatgtgaaaattacttatttagattgaaagaaaggggaaaaaatatacagaggggtgattctagatc 14801074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 1e-17; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 9713905 - 9713831
Alignment:
Q  26 cagacgacgaaatcatgaaaatacacaaaa-gaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||| | ||||| |||||||| ||||| ||||||||||| ||||||||||||||||||||||||||    
T  9713905 cagacgacgaaataaagaaaaaacacaaaaagaaaaaacttgatatatgtggaaatcacttatttagattgaaag 9713831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 43 - 111
Target Start/End: Complemental strand, 47158207 - 47158139
Alignment:
Q  43 aaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaaggaaatgaaaaaa 111  Q
    |||| ||||||||||||| ||||||||||| ||||||||||||||||| |||||||| || ||||||||    
T  47158207 aaaaaacacaaaagaaaaaacttgatatatgtggaaatcacttatttaaattgaaagaaagtgaaaaaa 47158139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 13634110 - 13634039
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||  |||| ||||||||||||| |||||||| || || ||| |||||||||||||||||||    
T  13634110 agacgacgaaatcacaaaaa-acacaaaagaaaaaacttgatagatgtgaaaaccacttatttagattgaaag 13634039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 22300844 - 22300768
Alignment:
Q  24 cacagacgacgaaatcatgaaaatac-acaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||||| ||||| |  |||||||||| |||||||||||  || |||||||||||||| ||||||||    
T  22300844 cacagacgacgaaatcacgaaaaaagtacaaaagaaagcacttgatatacgtgaaaatcacttatttaaattgaaag 22300768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 26633785 - 26633856
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||  |||| ||||||||||||| |||||||| || || ||| |||||||||||||||||||    
T  26633785 agacgacgaaatcacaaaaa-acacaaaagaaaaaacttgatagatgtgaaaaccacttatttagattgaaag 26633856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 48 - 99
Target Start/End: Complemental strand, 9643355 - 9643304
Alignment:
Q  48 acacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||||||||||||||| |||||||| || ||||||||||||||||| |||||    
T  9643355 acacaaaagaaaacacatgatatatgtgaaaatcacttatttagatcgaaag 9643304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 42032640 - 42032691
Alignment:
Q  29 acgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaat 80  Q
    |||| ||||||| ||||| ||||||||||||| |||||||||||||||||||    
T  42032640 acgaagaaatcacgaaaaaacacaaaagaaaagacttgatatatatggaaat 42032691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 2520772 - 2520703
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaa 97  Q
    ||||||||||||||  |||| ||||||||||||| |||||||| || || ||| |||||||||||||||||    
T  2520772 agacgacgaaatcacaaaaa-acacaaaagaaaaaacttgatagatgtgaaaaccacttatttagattgaa 2520703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 129
Target Start/End: Complemental strand, 28857334 - 28857272
Alignment:
Q  67 atatatatggaaatcacttatttagattgaaaggaaatgaaaaaagaatacggatgggtgatt 129  Q
    |||||| |||||||||||||||| |||||||||||||   |||||| |||| |||||||||||    
T  28857334 atatatgtggaaatcacttatttggattgaaaggaaagagaaaaaggatacagatgggtgatt 28857272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 51888346 - 51888396
Alignment:
Q  43 aaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagat 93  Q
    |||| ||||||||||||||||||||||||| || ||||||||| |||||||    
T  51888346 aaaaaacacaaaagaaaacacttgatatatgtgaaaatcacttgtttagat 51888396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 4937802 - 4937757
Alignment:
Q  52 aaaagaaaacacttgatatatatggaaatcacttatttagattgaa 97  Q
    ||||||||| |||| ||||||||| |||||||||||||||||||||    
T  4937802 aaaagaaaaaacttaatatatatgaaaatcacttatttagattgaa 4937757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 113
Target Start/End: Original strand, 22038935 - 22039000
Alignment:
Q  48 acacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaaggaaatgaaaaaaga 113  Q
    ||||||||||||| |||||||| || || ||||||||||||||||| ||||| ||  |||||||||    
T  22038935 acacaaaagaaaaaacttgatagatgtgaaaatcacttatttagatagaaagaaagggaaaaaaga 22039000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 136
Target Start/End: Complemental strand, 52944304 - 52944198
Alignment:
Q  26 cagacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaaggaaatgaaaaaagaatacggatgggt 125  Q
    ||||| ||||||||| |||||  ||||||||||||||||    |||| || ||||||||||||||||||||||| ||| | |||||  |||| || || |    
T  52944304 cagactacgaaatcacgaaaaagcacaaaagaaaacact----atatgtgaaaatcacttatttagattgaaagaaaagggaaaaatgatacagagggat 52944209  T
Q  126 gattctagatc 136  Q
    |||| ||||||    
T  52944208 gattttagatc 52944198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 5119334 - 5119263
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||   ||| ||||||||| ||| ||||||||||| || ||| |||||||||||||||||||    
T  5119334 agacgacgaaatcacacaaa-acacaaaaggaaaaacttgatatatgtgaaaaccacttatttagattgaaag 5119263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 21686355 - 21686426
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||  |||| ||||||||| ||| |||||||| || || ||| |||||||||||||||||||    
T  21686355 agacgacgaaatcacaaaaa-acacaaaaggaaaaacttgatagatgtgaaaaccacttatttagattgaaag 21686426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 52 - 99
Target Start/End: Complemental strand, 9634645 - 9634598
Alignment:
Q  52 aaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||||||||||| |||||||| || ||||||||||||||||| |||||    
T  9634645 aaaagaaaacacatgatatatgtgaaaatcacttatttagatcgaaag 9634598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 48 - 99
Target Start/End: Original strand, 22558598 - 22558649
Alignment:
Q  48 acacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||| |||||||| || || ||| |||||||||||||||||||    
T  22558598 acacaaaagaaaaaacttgatagatgtgaaaaccacttatttagattgaaag 22558649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 29961054 - 29961109
Alignment:
Q  43 aaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaa 98  Q
    |||| ||||||||| ||| |||||||| || || ||||||||||||||||||||||    
T  29961054 aaaaaacacaaaaggaaaaacttgatagatgtgaaaatcacttatttagattgaaa 29961109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 33921046 - 33920984
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttattta 90  Q
    ||||||||||||||  ||||  |||||||||||| ||||||||||| || ||||||||||||||    
T  33921046 agacgacgaaatcacaaaaag-cacaaaagaaaaaacttgatatatgtgaaaatcacttattta 33920984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 33332685 - 33332735
Alignment:
Q  24 cacagacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatat 74  Q
    ||||||||||||||||| ||||| |||||||||||||  ||| ||||||||    
T  33332685 cacagacgacgaaatcacgaaaaaacacaaaagaaaaagctttatatatat 33332735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 47320531 - 47320581
Alignment:
Q  43 aaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagat 93  Q
    |||| |||||||||||||| |||||||| | || |||||||||||||||||    
T  47320531 aaaaaacacaaaagaaaacgcttgatatttgtgaaaatcacttatttagat 47320581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 111
Target Start/End: Original strand, 31359893 - 31359950
Alignment:
Q  54 aagaaaacacttgatatatatggaaatcacttatttagattgaaaggaaatgaaaaaa 111  Q
    ||||||| |||||||| || ||||||| | |||||||||||||||| ||||| |||||    
T  31359893 aagaaaaaacttgataaatgtggaaataatttatttagattgaaagaaaatggaaaaa 31359950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 133
Target Start/End: Complemental strand, 36161705 - 36161603
Alignment:
Q  26 cagacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaaggaaatgaaaaaagaatacggatgggt 125  Q
    ||||||| |||||||  |||| |||||||| ||||   ||||||||| |  |||||||||||||||||||||| ||||||  |||| ||| | |||||||    
T  36161705 cagacgaagaaatcacaaaaaaacacaaaaaaaaa---ttgatatatgtaaaaatcacttatttagattgaaa-gaaatgggaaaa-aatgcagatgggt 36161611  T
Q  126 gattctag 133  Q
    ||||||||    
T  36161610 gattctag 36161603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 37188694 - 37188739
Alignment:
Q  53 aaagaaaacacttgatatatatggaaatcacttatttagattgaaa 98  Q
    |||||||| ||| ||||||| || ||||||||||||||||||||||    
T  37188694 aaagaaaaaactagatatatgtgaaaatcacttatttagattgaaa 37188739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 111
Target Start/End: Original strand, 38166373 - 38166430
Alignment:
Q  54 aagaaaacacttgatatatatggaaatcacttatttagattgaaaggaaatgaaaaaa 111  Q
    |||| |||||||||||||| || ||||||||| ||||||| ||||||||  |||||||    
T  38166373 aagacaacacttgatatatgtgaaaatcacttgtttagatcgaaaggaatggaaaaaa 38166430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 52978794 - 52978749
Alignment:
Q  53 aaagaaaacacttgatatatatggaaatcacttatttagattgaaa 98  Q
    |||| ||| ||||||||||| || ||||||||||||||||||||||    
T  52978794 aaaggaaaaacttgatatatgtgaaaatcacttatttagattgaaa 52978749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 4142869 - 4142939
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||  |||| ||||||||| ||| |||||||| || || ||| |||||||||||||||||||    
T  4142869 agacgacgaaatcacaaaaa-acacaaaaggaaaaacttgatagatgtgaaaa-cacttatttagattgaaag 4142939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 19853626 - 19853693
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattg 95  Q
    ||||||||||||||  |||| ||| ||||||||| |||||||| || || ||| |||||||||||||||    
T  19853626 agacgacgaaatcacaaaaa-acaaaaaagaaaaaacttgatagatgtgaaaaccacttatttagattg 19853693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 22611178 - 22611107
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||  |||| ||||||||| | | |||||||| || || ||| |||||||||||||||||||    
T  22611178 agacgacgaaatcacaaaaa-acacaaaaggataaacttgatagatgtgaaaaccacttatttagattgaaag 22611107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 67 - 99
Target Start/End: Original strand, 33332756 - 33332788
Alignment:
Q  67 atatatatggaaatcacttatttagattgaaag 99  Q
    |||||||||||||||||||||||||||| ||||    
T  33332756 atatatatggaaatcacttatttagattaaaag 33332788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 35348284 - 35348229
Alignment:
Q  43 aaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||| ||||||||||||| ||||||||| | || ||| |||||||||||||||||||    
T  35348284 aaaaaacacaaaagaaaa-acttgatatttgtgaaaaccacttatttagattgaaag 35348229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 57 - 133
Target Start/End: Original strand, 36204525 - 36204601
Alignment:
Q  57 aaaacacttgatatatatggaaatcacttatttagattgaaaggaaatgaaaaaagaatacggatgggtgattctag 133  Q
    |||||||||||| ||| ||||||||||||||||| || ||||| ||| | ||| | ||| | || ||||||||||||    
T  36204525 aaaacacttgatctatgtggaaatcacttatttaaatcgaaagaaaaaggaaacaaaatgcagaggggtgattctag 36204601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 50761 - 50690
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||||||||||||| ||||| ||||||||| ||| |||||||| || || ||| |||||||||||||||||||    
T  50761 agacgacgaaatcacgaaaa-acacaaaaggaaaaacttgatagatgtgaaaaccacttatttagattgaaag 50690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 32861 - 32933
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||  |||| ||||||||| ||| |||||||| || || ||| |||||||||||||||||||    
T  32861 agacgacgaaatcacaaaaaaacacaaaaggaaaaacttgatagatgtgaaaaccacttatttagattgaaag 32933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 10156 - 10238
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaaggaaatgaaaaaa 111  Q
    ||||||||||||||  ||||  |||||||| ||| ||||||||||| || ||| ||||||||||||| ||||| ||| |||||||    
T  10156 agacgacgaaatcacaaaaa--cacaaaaggaaaaacttgatatatgtgaaaaccacttatttagatggaaagaaaacgaaaaaa 10238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 38006 - 37950
Alignment:
Q  43 aaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||| ||||||||| ||| |||||| |||| || ||| |||||||||||||||||||    
T  38006 aaaaaacacaaaaggaaaaacttgacatatgtgaaaaccacttatttagattgaaag 37950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 1319 - 1247
Alignment:
Q  27 agacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||||| |||||||  |||| |||||||||| || ||||||||||| || ||| |||||||||||| ||||||    
T  1319 agacgaagaaatcacaaaaaaacacaaaagagaaaacttgatatatgtgaaaaccacttatttagagtgaaag 1247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 1932 - 2003
Alignment:
Q  26 cagacgacgaaatcatgaaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||||||||||||||  ||||  |||||||| ||| ||||||||||| || ||| |||||||||| ||||||||    
T  1932 cagacgacgaaatcacaaaaa--cacaaaaggaaaaacttgatatatgtgcaaaccacttatttaaattgaaag 2003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 93079 - 93003
Alignment:
Q  26 cagacgacgaaatcatga---aaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    ||||||||||||||||||   ||| | || |||||||| ||||||||||   | |||||||||||||||||||||||    
T  93079 cagacgacgaaatcatgaggaaaaaaaacgaaagaaaaaacttgatataagcgtaaatcacttatttagattgaaag 93003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 7675 - 7619
Alignment:
Q  43 aaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||| ||||||||| ||| ||||||||||| || ||| |||||||||| ||||||||    
T  7675 aaaaaacacaaaaggaaaaacttgatatatgtgaaaaccacttatttaaattgaaag 7619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 15451 - 15395
Alignment:
Q  43 aaaatacacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaag 99  Q
    |||| ||||||||| ||| |||||| | ||||| ||| |||||||||||||||||||    
T  15451 aaaaaacacaaaaggaaaaacttgaaagatatgaaaaccacttatttagattgaaag 15395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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