View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21364_low_8 (Length: 346)
Name: NF21364_low_8
Description: NF21364
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21364_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 295; Significance: 1e-166; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 5 - 329
Target Start/End: Complemental strand, 11151642 - 11151321
Alignment:
| Q |
5 |
tgtcgaagaatatatttacaagcaccgaacatcagtatagctctaggcttgccttcaattttcacattgttcatattatacaatccgaaatatggtttgg |
104 |
Q |
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| T |
11151642 |
tgtcgaaccatatatttacaagcaccgaacatcggtatagctctaggcttgccttcaattttcacattgttcatattatacaatccgaaatatggtttgg |
11151543 |
T |
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| Q |
105 |
attctataatccaaataaagagtatctatgtaccacttgaatttgaatttttaacctcttcctgtttaaagtctgcatatcaaagctaaatgaattgaag |
204 |
Q |
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| T |
11151542 |
attctataattcaaataaagagtatctatgtaccacttgaatttgaatttttaacctcttcctgtttaaagtctgcatatcaaagctaaatgaattgaag |
11151443 |
T |
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| Q |
205 |
aacttcaacaataatagtactataaatgtgaaattcaaaagcatatattctacagtttggttaattgttatccaggtaatgaaacagggtttcttctatg |
304 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11151442 |
aacttcaac---aatagtactataaatgtgaaattcaaaagcatatattctacagtttggttaattgttatccaggtaatgaaacagggtttcttctatg |
11151346 |
T |
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| Q |
305 |
ttttttcatttgacattaattttat |
329 |
Q |
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||||||||||||||||||||||||| |
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| T |
11151345 |
ttttttcatttgacattaattttat |
11151321 |
T |
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