View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21370_high_12 (Length: 205)
Name: NF21370_high_12
Description: NF21370
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21370_high_12 |
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Alignment Details
Target: chr6 (Bit Score: 176; Significance: 5e-95; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 176; E-Value: 5e-95
Query Start/End: Original strand, 17 - 192
Target Start/End: Complemental strand, 12633524 - 12633349
Alignment:
| Q |
17 |
cataaagagctttgatttcctcgatatcatcatagctaccaagaaatattggagatctttcatgcaattttgttggaattaaatcaagtgcctgatatca |
116 |
Q |
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| T |
12633524 |
cataaagagctttgatttcctcgatatcatcatagctaccaagaaatattggagatctttcatgcaattttgttggaattaaatcaagtgcctgatatca |
12633425 |
T |
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| Q |
117 |
tagaagatttatcagttcattgcaaaaatgatgcttgcattatacttcaaaaccatacatctaaagtagtataatc |
192 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12633424 |
tagaagatttatcagttcattgcaaaaatgatgcttgcattatacttcaaaaccatacatctaaagtagtataatc |
12633349 |
T |
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