View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21370_low_10 (Length: 294)
Name: NF21370_low_10
Description: NF21370
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21370_low_10 |
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Alignment Details
Target: chr3 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 16 - 270
Target Start/End: Complemental strand, 37448208 - 37447954
Alignment:
| Q |
16 |
atcaactatatgtatcatcccctcgttccaaacgattgtaaaatatgtctcttttccttccctcttgtctcctccccttcattgaatcatatggttaagc |
115 |
Q |
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| T |
37448208 |
atcaactatatgtatcatcccctcgttccaaacgattgtaaaatatgtctcttttccttccctcttgtctcctccccttcattgaatcatatggttaagc |
37448109 |
T |
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| Q |
116 |
atcttaaattaacctcccatttatactaagttatttgtcggggaggcataaagcaaagactttgtgacctcccattaggttgggcatgggattggctaca |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37448108 |
atcttaaattaacctcccatttatactaagttatttgtcggggaggcataaagcaaagactttgtgacctcccattaggttgggcatgggattggctaca |
37448009 |
T |
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| Q |
216 |
taaattaaataactccataacattatatcatgagttataatatctaatcaaagaa |
270 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
37448008 |
taaattaaataactccataacattatatcacgagttataatatctaatcaaagaa |
37447954 |
T |
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