View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21372_high_1 (Length: 240)

Name: NF21372_high_1
Description: NF21372
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21372_high_1
NF21372_high_1
[»] chr8 (18 HSPs)
chr8 (4-240)||(295387-295623)
chr8 (1-83)||(9738684-9738765)
chr8 (1-41)||(34473989-34474029)
chr8 (1-83)||(40102022-40102103)
chr8 (1-41)||(42768113-42768153)
chr8 (1-40)||(28927722-28927761)
chr8 (4-41)||(42047375-42047412)
chr8 (1-41)||(426141-426181)
chr8 (1-41)||(1179434-1179474)
chr8 (1-41)||(8841070-8841110)
chr8 (1-41)||(11879481-11879521)
chr8 (1-41)||(11896897-11896937)
chr8 (1-41)||(21418583-21418623)
chr8 (1-41)||(22767172-22767212)
chr8 (1-41)||(26294229-26294269)
chr8 (1-41)||(26307486-26307526)
chr8 (1-41)||(32174994-32175034)
chr8 (1-41)||(37210040-37210080)
[»] chr7 (16 HSPs)
chr7 (1-83)||(21752657-21752738)
chr7 (1-41)||(32933587-32933627)
chr7 (1-41)||(37351981-37352021)
chr7 (2-41)||(22330623-22330662)
chr7 (1-40)||(43213349-43213388)
chr7 (4-41)||(41985094-41985131)
chr7 (4-41)||(47424979-47425016)
chr7 (1-41)||(2790217-2790257)
chr7 (1-41)||(8792588-8792628)
chr7 (1-41)||(16567356-16567396)
chr7 (1-41)||(16598266-16598306)
chr7 (1-41)||(19426620-19426660)
chr7 (1-41)||(26153685-26153725)
chr7 (1-41)||(30447400-30447440)
chr7 (1-41)||(40842445-40842485)
chr7 (1-41)||(41254816-41254856)
[»] chr3 (21 HSPs)
chr3 (1-41)||(33007400-33007440)
chr3 (1-38)||(29705946-29705983)
chr3 (4-41)||(39540275-39540312)
chr3 (1-41)||(49196736-49196776)
chr3 (1-83)||(51410805-51410886)
chr3 (1-40)||(41309041-41309080)
chr3 (1-40)||(46473169-46473208)
chr3 (1-35)||(9027919-9027953)
chr3 (4-41)||(23585155-23585192)
chr3 (4-41)||(23599978-23600015)
chr3 (1-41)||(108471-108511)
chr3 (1-41)||(6126494-6126534)
chr3 (1-41)||(8627897-8627937)
chr3 (1-41)||(14207415-14207455)
chr3 (1-41)||(14215163-14215203)
chr3 (1-41)||(32457746-32457786)
chr3 (1-41)||(35554106-35554146)
chr3 (1-41)||(37303423-37303463)
chr3 (1-41)||(43169744-43169784)
chr3 (1-41)||(48649620-48649660)
chr3 (1-41)||(51032615-51032655)
[»] chr1 (16 HSPs)
chr1 (1-83)||(31436819-31436900)
chr1 (1-41)||(37690458-37690498)
chr1 (1-82)||(28253015-28253095)
chr1 (1-41)||(18959044-18959084)
chr1 (1-41)||(50141926-50141966)
chr1 (1-41)||(52233212-52233252)
chr1 (1-82)||(8464504-8464584)
chr1 (2-41)||(37515956-37515995)
chr1 (1-40)||(37947211-37947250)
chr1 (1-41)||(5477154-5477194)
chr1 (1-41)||(15061885-15061925)
chr1 (1-41)||(39010854-39010894)
chr1 (1-41)||(43755669-43755709)
chr1 (1-41)||(45042301-45042341)
chr1 (1-41)||(48325769-48325809)
chr1 (1-41)||(52020415-52020455)
[»] chr6 (4 HSPs)
chr6 (1-82)||(8395342-8395422)
chr6 (1-41)||(29383597-29383637)
chr6 (1-41)||(32457243-32457283)
chr6 (1-41)||(32853135-32853175)
[»] scaffold0154 (1 HSPs)
scaffold0154 (1-83)||(9839-9920)
[»] chr5 (10 HSPs)
chr5 (1-83)||(27340868-27340949)
chr5 (1-41)||(33567214-33567254)
chr5 (1-41)||(34381052-34381092)
chr5 (1-38)||(15531952-15531989)
chr5 (1-41)||(4434511-4434551)
chr5 (1-41)||(16202760-16202800)
chr5 (1-41)||(21023338-21023378)
chr5 (1-41)||(39458697-39458737)
chr5 (1-41)||(39595312-39595352)
chr5 (1-41)||(40223776-40223816)
[»] chr4 (20 HSPs)
chr4 (1-41)||(17805492-17805532)
chr4 (1-41)||(38952729-38952769)
chr4 (1-41)||(44165949-44165989)
chr4 (1-83)||(53583119-53583200)
chr4 (1-40)||(23347816-23347855)
chr4 (2-41)||(34116532-34116571)
chr4 (1-40)||(56379433-56379472)
chr4 (1-81)||(46911899-46911978)
chr4 (4-41)||(1580277-1580314)
chr4 (1-38)||(36413317-36413354)
chr4 (1-41)||(9162106-9162146)
chr4 (1-41)||(18880825-18880865)
chr4 (1-41)||(22257187-22257227)
chr4 (1-41)||(31275186-31275226)
chr4 (1-41)||(36123029-36123069)
chr4 (1-41)||(39241292-39241332)
chr4 (1-41)||(46173579-46173619)
chr4 (1-41)||(46794492-46794532)
chr4 (1-41)||(51389356-51389396)
chr4 (1-41)||(55996462-55996502)
[»] chr2 (9 HSPs)
chr2 (1-83)||(23880094-23880175)
chr2 (2-40)||(7428470-7428508)
chr2 (4-41)||(3091781-3091818)
chr2 (1-41)||(1889187-1889227)
chr2 (1-41)||(7086115-7086155)
chr2 (1-41)||(15141502-15141542)
chr2 (1-41)||(26321688-26321728)
chr2 (1-41)||(34139029-34139069)
chr2 (1-41)||(34372887-34372927)
[»] scaffold0204 (1 HSPs)
scaffold0204 (1-41)||(27379-27419)
[»] scaffold0076 (1 HSPs)
scaffold0076 (1-41)||(11248-11288)
[»] scaffold0060 (1 HSPs)
scaffold0060 (1-41)||(6857-6897)
[»] scaffold0054 (1 HSPs)
scaffold0054 (1-41)||(31591-31631)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-41)||(18044-18084)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-41)||(36042-36082)


Alignment Details
Target: chr8 (Bit Score: 176; Significance: 6e-95; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 4 - 240
Target Start/End: Complemental strand, 295623 - 295387
Alignment:
Q  4 aataagagaataatgtgagtatgatagagaaaattgtcnnnnnnnttgtgataaggtgattgtacaaatatcatttctctctttcaaaagaccctgattt 103  Q
    ||||||| |||||||||||||||| ||||||| || ||       ||||||||| ||| |||||||||||||||||||| |||| |||||||||||||||    
T  295623 aataagaaaataatgtgagtatgagagagaaagttatcaaaaaaattgtgataaagtggttgtacaaatatcatttctcacttttaaaagaccctgattt 295524  T
Q  104 aatttagcctaatatttattcatccaagtataaggagggaaaaatatgtacgatgcaagtatgtatgtatatatctggctaaggttgatgccttaatttt 203  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  295523 aatttagcctaatatttattcatccaagtataaggaggggaaaatatgtacgatgcaagtatgtatgtttatatctggctaaggttgatgccttaatttt 295424  T
Q  204 ggaccaagcaaagagagataaaataaaacaggaagac 240  Q
    |||||||||||||||||||||||||||||||||||||    
T  295423 ggaccaagcaaagagagataaaataaaacaggaagac 295387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 9738684 - 9738765
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtcnnnnnnnttgtgataaggtgattgtacaaatatcatttctct 83  Q
    |||||||| || ||||||||||||||| |||||||||||||       |||||| || ||| |||||||||||||||||||||    
T  9738684 gagaataaaaggataatgtgagtatgagagagaaaattgtc-aaaaaattgtgagaaagtggttgtacaaatatcatttctct 9738765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 34474029 - 34473989
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||| |||||||||||||    
T  34474029 gagaataagaggataatgtgagtatgagagagaaaattgtc 34473989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 40102103 - 40102022
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtcnnnnnnnttgtgataaggtgattgtacaaatatcatttctct 83  Q
    ||||||||||||||||||| ||||||| ||||||| |||||       |||||| || ||| |||||||||||||||||||||    
T  40102103 gagaataagagaataatgtaagtatgagagagaaagttgtc-aaaaagttgtgaaaaagtggttgtacaaatatcatttctct 40102022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 42768113 - 42768153
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||| |||||||||||||    
T  42768113 gagaataagaggataatgtgagtatgagagagaaaattgtc 42768153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 28927761 - 28927722
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgt 40  Q
    ||||||||||||||||||||||||||| ||| ||||||||    
T  28927761 gagaataagagaataatgtgagtatgagagaaaaaattgt 28927722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 42047412 - 42047375
Alignment:
Q  4 aataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  42047412 aataagagtataatgtgagtatgagagagaaaattgtc 42047375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 426181 - 426141
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||| ||||||| |||||    
T  426181 gagaataagagtataatgtgagtatgagagagaaagttgtc 426141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 1179474 - 1179434
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    |||||||||||||||||||||| |||| ||||||| |||||    
T  1179474 gagaataagagaataatgtgagaatgagagagaaagttgtc 1179434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 8841110 - 8841070
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||  ||||||| |||||||||||||||||||||    
T  8841110 gagaataagatgataatgtaagtatgatagagaaaattgtc 8841070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 11879481 - 11879521
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||| ||||||| |||||    
T  11879481 gagaataagaggataatgtgagtatgagagagaaagttgtc 11879521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 11896897 - 11896937
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||| ||||||| |||||    
T  11896897 gagaataagaggataatgtgagtatgagagagaaagttgtc 11896937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 21418583 - 21418623
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||| ||||||| |||||    
T  21418583 gagaataagagtataatgtgagtatgagagagaaagttgtc 21418623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 22767212 - 22767172
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||| | ||||||||||||||| |||||||||||||    
T  22767212 gagaataaggggataatgtgagtatgagagagaaaattgtc 22767172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 26294269 - 26294229
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||  |||||||||||||    
T  26294269 gagaataagagtataatgtgagtatgtgagagaaaattgtc 26294229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 26307526 - 26307486
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||  |||||||||||||    
T  26307526 gagaataagagtataatgtgagtatgtgagagaaaattgtc 26307486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 32175034 - 32174994
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||| ||||||| |||||    
T  32175034 gagaataagaggataatgtgagtatgagagagaaagttgtc 32174994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 37210040 - 37210080
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    |||||||||| |||||||||||||||| ||||||| |||||    
T  37210040 gagaataagataataatgtgagtatgagagagaaagttgtc 37210080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000005; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 21752738 - 21752657
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtcnnnnnnnttgtgataaggtgattgtacaaatatcatttctct 83  Q
    ||||||||||||||||||||||||||| ||| ||| |||||       |||||| || |||||||||||||||||||||||||    
T  21752738 gagaataagagaataatgtgagtatgagagataaagttgtc-aaaaagttgtgagaaagtgattgtacaaatatcatttctct 21752657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 32933627 - 32933587
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    |||||||||||||||| |||||||||| |||||||||||||    
T  32933627 gagaataagagaataacgtgagtatgagagagaaaattgtc 32933587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 37351981 - 37352021
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  37351981 gagaataagagaataatgtgagtatgagagagaaagttgtc 37352021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 22330623 - 22330662
Alignment:
Q  2 agaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    |||||||||||||||||||||||||| ||||||| |||||    
T  22330623 agaataagagaataatgtgagtatgagagagaaagttgtc 22330662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 43213388 - 43213349
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgt 40  Q
    ||||||||||| ||||||||||||||| ||||||||||||    
T  43213388 gagaataagagtataatgtgagtatgagagagaaaattgt 43213349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 41985094 - 41985131
Alignment:
Q  4 aataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  41985094 aataagagaataatgtgagtatgagagagaaagttgtc 41985131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 47424979 - 47425016
Alignment:
Q  4 aataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  47424979 aataagaggataatgtgagtatgagagagaaaattgtc 47425016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 2790257 - 2790217
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||| ||||||| |||||    
T  2790257 gagaataagagtataatgtgagtatgagagagaaagttgtc 2790217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 8792588 - 8792628
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||||||||||||||||||| ||| ||| |||||    
T  8792588 gagaataagagaataatgtgagtatgagagaaaaagttgtc 8792628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 16567396 - 16567356
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||  ||||||||||||||| |||||||||||||    
T  16567396 gagaataagaatataatgtgagtatgaaagagaaaattgtc 16567356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 16598266 - 16598306
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||  ||||||||||||||| |||||||||||||    
T  16598266 gagaataagaatataatgtgagtatgaaagagaaaattgtc 16598306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 19426660 - 19426620
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||| ||||||| |||||    
T  19426660 gagaataagaggataatgtgagtatgagagagaaagttgtc 19426620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 26153725 - 26153685
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||  ||||||||||||||| |||||||||||||    
T  26153725 gagaataagaatataatgtgagtatgagagagaaaattgtc 26153685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 30447440 - 30447400
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||| |||||| ||||||    
T  30447440 gagaataagagtataatgtgagtatgagagagaagattgtc 30447400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 40842485 - 40842445
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||| ||||||| |||||    
T  40842485 gagaataagaggataatgtgagtatgagagagaaagttgtc 40842445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 41254856 - 41254816
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||| ||||||| |||||    
T  41254856 gagaataagagtataatgtgagtatgagagagaaagttgtc 41254816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000005; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 33007440 - 33007400
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  33007440 gagaataagagaataatgtgagtatgagagagaaaattgtc 33007400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 29705983 - 29705946
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaatt 38  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  29705983 gagaataagagaataatgtgagtatgaaagagaaaatt 29705946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 39540312 - 39540275
Alignment:
Q  4 aataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    |||||||||||||||||||||||| |||||||||||||    
T  39540312 aataagagaataatgtgagtatgagagagaaaattgtc 39540275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 49196776 - 49196736
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||| |||||||||||||    
T  49196776 gagaataagagtataatgtgagtatgagagagaaaattgtc 49196736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 51410886 - 51410805
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtcnnnnnnnttgtgataaggtgattgtacaaatatcatttctct 83  Q
    ||||||||||| ||||||||| ||||| |||||||||||||       |||||| || ||| |||||||||||||||||||||    
T  51410886 gagaataagaggataatgtgaatatgaaagagaaaattgtc-aaaaagttgtgagaaagtggttgtacaaatatcatttctct 51410805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 41309080 - 41309041
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgt 40  Q
    ||||||||||| ||||||||||||||| ||||||||||||    
T  41309080 gagaataagaggataatgtgagtatgagagagaaaattgt 41309041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 46473208 - 46473169
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgt 40  Q
    |||||||||| |||||||||||||||| ||||||||||||    
T  46473208 gagaataagataataatgtgagtatgagagagaaaattgt 46473169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 9027953 - 9027919
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaa 35  Q
    ||||||||||||||||||||||||||| |||||||    
T  9027953 gagaataagagaataatgtgagtatgagagagaaa 9027919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 23585192 - 23585155
Alignment:
Q  4 aataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  23585192 aataagagaataatgtgagtatgagagagaaagttgtc 23585155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 23600015 - 23599978
Alignment:
Q  4 aataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  23600015 aataagagaataatgtgagtatgagagagaaagttgtc 23599978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 108511 - 108471
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||| ||||||| |||||    
T  108511 gagaataagaggataatgtgagtatgagagagaaagttgtc 108471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 6126534 - 6126494
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||| ||||||| |||||    
T  6126534 gagaataagaggataatgtgagtatgagagagaaagttgtc 6126494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 8627937 - 8627897
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||  ||||||||||||||| |||||||||||||    
T  8627937 gagaataagaagataatgtgagtatgagagagaaaattgtc 8627897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 14207455 - 14207415
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||| ||||||| |||||    
T  14207455 gagaataagagtataatgtgagtatgagagagaaagttgtc 14207415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 14215203 - 14215163
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||| ||||||| |||||    
T  14215203 gagaataagagtataatgtgagtatgagagagaaagttgtc 14215163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 32457746 - 32457786
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||| ||||||| |||||    
T  32457746 gagaataagagtataatgtgagtatgagagagaaagttgtc 32457786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 35554106 - 35554146
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||| ||||||| |||||    
T  35554106 gagaataagaggataatgtgagtatgagagagaaagttgtc 35554146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 37303463 - 37303423
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||| ||||||| |||||    
T  37303463 gagaataagaggataatgtgagtatgagagagaaagttgtc 37303423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 43169744 - 43169784
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||||||||||||||||||| ||| ||| |||||    
T  43169744 gagaataagagaataatgtgagtatgagagaaaaagttgtc 43169784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 48649660 - 48649620
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||| ||||||| |||||    
T  48649660 gagaataagaggataatgtgagtatgagagagaaagttgtc 48649620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 51032615 - 51032655
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||  ||||||||||||||| |||||||||||||    
T  51032615 gagaataagaagataatgtgagtatgagagagaaaattgtc 51032655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000005; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 31436900 - 31436819
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtcnnnnnnnttgtgataaggtgattgtacaaatatcatttctct 83  Q
    ||||||||||| ||||||||||||||| |||||||||||||       |||||| || ||| |||||||||||||||||||||    
T  31436900 gagaataagaggataatgtgagtatgagagagaaaattgtc-aaaaagttgtgagaaagtggttgtacaaatatcatttctct 31436819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 37690498 - 37690458
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  37690498 gagaataagagaataatgtgagtatgagagagaaaattgtc 37690458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 28253095 - 28253015
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtcnnnnnnnttgtgataaggtgattgtacaaatatcatttctc 82  Q
    ||||||||||| ||||||||||||||| |||||||||||||       |||||| || ||| ||||||||||||||||||||    
T  28253095 gagaataagaggataatgtgagtatgagagagaaaattgtc-aaaaagttgtgagaaagtggttgtacaaatatcatttctc 28253015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 18959084 - 18959044
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    |||||||||| |||||||||||||||| |||||||||||||    
T  18959084 gagaataagataataatgtgagtatgagagagaaaattgtc 18959044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 50141926 - 50141966
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  50141926 gagaataagagaataatgtgagtatgagagagaaagttgtc 50141966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 52233212 - 52233252
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||| |||||||||||||||||||||    
T  52233212 gagaataagaggataatgtaagtatgatagagaaaattgtc 52233252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 8464504 - 8464584
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtcnnnnnnnttgtgataaggtgattgtacaaatatcatttctc 82  Q
    ||||||||||  ||||||||||||||| |||||||||||||       |||| |||| ||| ||||||||||||||||||||    
T  8464504 gagaataagaatataatgtgagtatgagagagaaaattgtc-aaaaagttgtaataaagtggttgtacaaatatcatttctc 8464584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 37515995 - 37515956
Alignment:
Q  2 agaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    |||| ||||||||||||||||||||| |||||||||||||    
T  37515995 agaacaagagaataatgtgagtatgagagagaaaattgtc 37515956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 37947211 - 37947250
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgt 40  Q
    ||||||||||  ||||||||||||||||||||||||||||    
T  37947211 gagaataagaagataatgtgagtatgatagagaaaattgt 37947250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 5477154 - 5477194
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    |||||||| |||||||||||||||||| ||||||| |||||    
T  5477154 gagaataaaagaataatgtgagtatgagagagaaagttgtc 5477194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 15061925 - 15061885
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||  ||||||||||||||| |||||||||||||    
T  15061925 gagaataagatgataatgtgagtatgagagagaaaattgtc 15061885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 39010894 - 39010854
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||| ||||||| |||||    
T  39010894 gagaataagaggataatgtgagtatgagagagaaagttgtc 39010854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 43755669 - 43755709
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||| ||||||||| |||||||||||||    
T  43755669 gagaataagagtataatatgagtatgaaagagaaaattgtc 43755709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 45042341 - 45042301
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||| ||| |||||||||    
T  45042341 gagaataagagtataatgtgagtatgagagaaaaaattgtc 45042301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 48325769 - 48325809
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||| | |||||||||||    
T  48325769 gagaataagagtataatgtgagtatgagatagaaaattgtc 48325809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 52020415 - 52020455
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||| ||||||| |||||    
T  52020415 gagaataagaggataatgtgagtatgagagagaaagttgtc 52020455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 8395422 - 8395342
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtcnnnnnnnttgtgataaggtgattgtacaaatatcatttctc 82  Q
    ||||||||||||||||||||||||||| ||||||| |||||       |||||| || ||| ||||||||||||||||||||    
T  8395422 gagaataagagaataatgtgagtatgagagagaaagttgtc-aaaaagttgtgagaaagtggttgtacaaatatcatttctc 8395342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 29383637 - 29383597
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||| ||||||| |||||    
T  29383637 gagaataagagtataatgtgagtatgagagagaaagttgtc 29383597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 32457243 - 32457283
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||  |||||||||||||    
T  32457243 gagaataagagtataatgtgagtatgtgagagaaaattgtc 32457283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 32853135 - 32853175
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||| ||||||| |||||    
T  32853135 gagaataagagtataatgtgagtatgagagagaaagttgtc 32853175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 9839 - 9920
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtcnnnnnnnttgtgataaggtgattgtacaaatatcatttctct 83  Q
    |||||||||||||||||  |||||||| |||||||||||||       |||||| ||  ||||||||||||||||||||||||    
T  9839 gagaataagagaataatacgagtatgagagagaaaattgtc-aaaaaattgtgaaaaaatgattgtacaaatatcatttctct 9920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000001; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 27340949 - 27340868
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtcnnnnnnnttgtgataaggtgattgtacaaatatcatttctct 83  Q
    ||||||||||  ||||||||||||||| |||||||||||||       || | |||| |||||||||||||||||||||||||    
T  27340949 gagaataagaatataatgtgagtatgagagagaaaattgtc-aaaaaattataataaagtgattgtacaaatatcatttctct 27340868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 33567214 - 33567254
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  33567214 gagaataagagaataatgtgagtatgagagagaaagttgtc 33567254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 34381092 - 34381052
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  34381092 gagaataagagaataatgtgagtatgagagagaaagttgtc 34381052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 15531952 - 15531989
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaatt 38  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  15531952 gagaataagaggataatgtgagtatgacagagaaaatt 15531989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 4434551 - 4434511
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    |||||||||| |||||||||||||||| ||| |||||||||    
T  4434551 gagaataagataataatgtgagtatgagagaaaaaattgtc 4434511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 16202800 - 16202760
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||| ||||||| |||||    
T  16202800 gagaataagaggataatgtgagtatgagagagaaagttgtc 16202760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 21023378 - 21023338
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    |||||||||| |||||||||||||||| ||||||| |||||    
T  21023378 gagaataagaaaataatgtgagtatgagagagaaagttgtc 21023338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 39458737 - 39458697
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||| ||||||| |||||    
T  39458737 gagaataagaggataatgtgagtatgagagagaaagttgtc 39458697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 39595352 - 39595312
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    |||||||||||||||| |||||||||| ||||||| |||||    
T  39595352 gagaataagagaataacgtgagtatgagagagaaagttgtc 39595312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 40223776 - 40223816
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||| ||||||| |||||    
T  40223776 gagaataagaggataatgtgagtatgagagagaaagttgtc 40223816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 33; Significance: 0.000000001; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 17805532 - 17805492
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    |||||||||| |||||||||||||||| |||||||||||||    
T  17805532 gagaataagaaaataatgtgagtatgagagagaaaattgtc 17805492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 38952769 - 38952729
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  38952769 gagaataagagaataatgtgagtatgagagagaaagttgtc 38952729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 44165989 - 44165949
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  44165989 gagaataagagaataatgtgagtatgagagagaaagttgtc 44165949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 53583119 - 53583200
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtcnnnnnnnttgtgataaggtgattgtacaaatatcatttctct 83  Q
    ||||||||||| ||||||||||||||| ||||||| |||||       |||||| || ||| |||||||||||||||||||||    
T  53583119 gagaataagaggataatgtgagtatgagagagaaagttgtc-aaaaagttgtgagaaagtggttgtacaaatatcatttctct 53583200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 23347855 - 23347816
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgt 40  Q
    ||||||||||| ||||||||||||||| ||||||||||||    
T  23347855 gagaataagaggataatgtgagtatgagagagaaaattgt 23347816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 34116532 - 34116571
Alignment:
Q  2 agaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    |||||||||| ||||||||||||||| |||||||||||||    
T  34116532 agaataagagtataatgtgagtatgagagagaaaattgtc 34116571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 56379472 - 56379433
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgt 40  Q
    ||||||||||||||||||||||||||| ||||||| ||||    
T  56379472 gagaataagagaataatgtgagtatgagagagaaagttgt 56379433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 46911978 - 46911899
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtcnnnnnnnttgtgataaggtgattgtacaaatatcatttct 81  Q
    |||| |||||||||||||||||||||| ||||||| |||||       |||||| || ||||||||| |||||||||||||    
T  46911978 gagagtaagagaataatgtgagtatgagagagaaagttgtc-aaaaagttgtgagaaagtgattgtaaaaatatcatttct 46911899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 1580277 - 1580314
Alignment:
Q  4 aataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  1580277 aataagaggataatgtgagtatgagagagaaaattgtc 1580314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 36413317 - 36413354
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaatt 38  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  36413317 gagaataagagtataatgtgagtatgagagagaaaatt 36413354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 9162146 - 9162106
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    |||||||||||||||||| |||||| | |||||||||||||    
T  9162146 gagaataagagaataatgcgagtattagagagaaaattgtc 9162106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 18880865 - 18880825
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||  ||||||||||||||| |||||||||||||    
T  18880865 gagaataagaatataatgtgagtatgagagagaaaattgtc 18880825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 22257187 - 22257227
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||  |||||||||||||||||||| ||||||||    
T  22257187 gagaataagatgataatgtgagtatgatagaggaaattgtc 22257227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 31275226 - 31275186
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    |||||||||| |||||||||||||||| ||||||| |||||    
T  31275226 gagaataagataataatgtgagtatgagagagaaagttgtc 31275186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 36123029 - 36123069
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||| | |||||||||||||    
T  36123029 gagaataagagtataatgtgagtataaaagagaaaattgtc 36123069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 39241292 - 39241332
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||| ||||||| |||||    
T  39241292 gagaataagaggataatgtgagtatgagagagaaagttgtc 39241332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 46173619 - 46173579
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    |||||||||||||||||||||||| || ||||||| |||||    
T  46173619 gagaataagagaataatgtgagtacgagagagaaagttgtc 46173579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 46794492 - 46794532
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||| ||||||| |||||    
T  46794492 gagaataagagtataatgtgagtatgagagagaaagttgtc 46794532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 51389396 - 51389356
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    |||||| |||||||||||||||||||| ||||||| |||||    
T  51389396 gagaattagagaataatgtgagtatgaaagagaaagttgtc 51389356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 55996502 - 55996462
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||  ||||||||||||||| |||||||||||||    
T  55996502 gagaataagaagataatgtgagtatgagagagaaaattgtc 55996462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000001; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 23880175 - 23880094
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtcnnnnnnnttgtgataaggtgattgtacaaatatcatttctct 83  Q
    ||||||||||||||||||||||||||| ||||||| || ||       |||||| || ||| |||||||||||||||||||||    
T  23880175 gagaataagagaataatgtgagtatgagagagaaagttatc-aaaaagttgtgagaaagtggttgtacaaatatcatttctct 23880094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 7428508 - 7428470
Alignment:
Q  2 agaataagagaataatgtgagtatgatagagaaaattgt 40  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  7428508 agaataagaggataatgtgagtatgagagagaaaattgt 7428470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 3091818 - 3091781
Alignment:
Q  4 aataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  3091818 aataaaagaataatgtgagtatgagagagaaaattgtc 3091781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 1889227 - 1889187
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||| ||||||| |||||    
T  1889227 gagaataagagtataatgtgagtatgagagagaaagttgtc 1889187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 7086115 - 7086155
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||| ||||||| |||||    
T  7086115 gagaataagaggataatgtgagtatgagagagaaagttgtc 7086155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 15141542 - 15141502
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||| ||||||| |||||    
T  15141542 gagaataagagtataatgtgagtatgagagagaaagttgtc 15141502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 26321688 - 26321728
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||  |||||||||||||||||||| ||||||||    
T  26321688 gagaataagatgataatgtgagtatgatagaggaaattgtc 26321728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 34139029 - 34139069
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||| ||| |||||||||    
T  34139029 gagaataagaggataatgtgagtatgagagataaaattgtc 34139069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 34372927 - 34372887
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||  ||||||||||||||| |||||||||||||    
T  34372927 gagaataagatgataatgtgagtatgagagagaaaattgtc 34372887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 27419 - 27379
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||| ||||||| |||||    
T  27419 gagaataagaggataatgtgagtatgagagagaaagttgtc 27379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 11288 - 11248
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||  |||||||||||||    
T  11288 gagaataagagtataatgtgagtatgtgagagaaaattgtc 11248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 6897 - 6857
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||| ||||||| |||||    
T  6897 gagaataagaggataatgtgagtatgagagagaaagttgtc 6857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 31591 - 31631
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||||||||||| ||||||| |||||    
T  31591 gagaataagagtataatgtgagtatgagagagaaagttgtc 31631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 18084 - 18044
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||| ||||||| ||||||| |||||||||||||    
T  18084 gagaataagagtataatgtaagtatgagagagaaaattgtc 18044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 36082 - 36042
Alignment:
Q  1 gagaataagagaataatgtgagtatgatagagaaaattgtc 41  Q
    ||||||||||||||||||||||||| | ||||||| |||||    
T  36082 gagaataagagaataatgtgagtataagagagaaagttgtc 36042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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